A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\Abi

General Information
SymbolDmel\AbiSpeciesD. melanogaster
NameAbelson interacting proteinAnnotation symbolCG9749
Feature typeprotein_coding_geneFlyBase IDFBgn0020510
Gene Model StatusCurrent Stock availability 3 publicly available
Also Known AsdAbi, Ablphilin
Genomic Location
Chromosome (arm)3RRecombination map
Cytogenetic map88A9-88A9Sequence location3R:9,944,984..9,948,142 [-]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene Abelson interacting protein is referred to in FlyBase by the symbol Dmel\Abi (CG9749, FBgn0020510). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: protein binding. There is experimental evidence for 14 unique biological process terms, many of which group under: cellular component organization or biogenesis; cellular process; system development; biological regulation; organelle organization; cell projection assembly; actin filament-based process; sensory organ development; cell adhesion; multicellular organismal development; central nervous system neuron development; localization; regulation of developmental process; muscle cell differentiation; regulation of protein metabolic process. 18 alleles are reported. The phenotypes of these alleles are annotated with: dorsocentral bristle; chaeta; longitudinal connective; scutellar bristle; sensory mother cell. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Abl-interactor, homeo-domain homologous domain; Neutrophil cytosol factor 2 p67phox; Src homology-3 domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1632196_at partially aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of Abi: 13 out of 14 probes fall into this exonic region. Gene sequence location is 3R:9944984..9948142.

External Summaries
hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
References
FB2012_01
References
Controlled Vocabulary Terms
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
88A9-88A9  
Limits computationally determined from genome sequence between P{PZ}flfl01949 and P{lacW}trxj14A6&P{PZ}trx00347  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
88A-88B  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Abi for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0082912 FBtr0112896 FBtr0307077 FBtr0307076 FBtr0082910 FBtr0082891 FBpp0111809 FBpp0082371 FBpp0297920 FBpp0297919 FBpp0082352 FBti0075450 FBti0011782 FBti0044920
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0082910
  2379
  473
FBtr0112896
  2373
  473
FBtr0307076
 
  2291
  472
FBtr0307077
 
  2391
  477
Additional Transcript Data & Comments
Reported size (kB)
1.7 (longest cDNA)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
Abi-PA  
FBpp0082371  
51.9  
473  
6.93  
Abi-PB  
FBpp0111809  
51.9  
473  
6.93  
Abi-PC  
FBpp0297919  
51.9  
472  
6.93  
 
 
Abi-PD  
FBpp0297920  
52.4  
477  
7.09  
 
 
Additional Polypeptide Data & Comments
Reported size (kDa)
473 (aa); 52 (kD observed)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view Kif19A-RB Abi-RB Abi-RD Abi-RC Abi-RA twf-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0020510


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0020510
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0020510 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 4386
embryo 02-04hr
 
 4249
embryo 04-06hr
 
 4349
embryo 06-08hr
 
 6106
embryo 08-10hr
 
 5648
embryo 10-12hr
 
 4949
embryo 12-14hr
 
 4333
embryo 14-16hr
 
 3491
embryo 16-18hr
 
 2816
embryo 18-20hr
 
 2481
embryo 20-22hr
 
 1623
embryo 22-24hr
 
 1797
larva L1
 
 1562
larva L2
 
 1153
larva L3 12hr old
 
 1048
larva L3 puffstage 1-2
 
 1098
larva L3 puffstage 3-6
 
 1697
larva L3 puffstage 7-9
 
 2131
white prepupae new
 
 2474
white prepupae 12hr
 
 2619
white prepupae 24hr
 
 3034
pupae 2d postWPP
 
 2595
pupae 3d postWPP
 
 1672
pupae 4d postWPP
 
 1094
adult male 01day
 
 1264
adult male 05day
 
 1515
adult male 30day
 
 1413
adult female 01day
 
 1865
adult female 05day
 
 2524
adult female 30day
 
 2633
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4386)
embryo 02-04hr
 (4249)
embryo 04-06hr
 (4349)
embryo 06-08hr
 (6106)
embryo 08-10hr
 (5648)
embryo 10-12hr
 (4949)
embryo 12-14hr
 (4333)
embryo 14-16hr
 (3491)
embryo 16-18hr
 (2816)
embryo 18-20hr
 (2481)
embryo 20-22hr
 (1623)
embryo 22-24hr
 (1797)
larva L1
 (1562)
larva L2
 (1153)
larva L3 12hr old
 (1048)
larva L3 puffstage 1-2
 (1098)
larva L3 puffstage 3-6
 (1697)
larva L3 puffstage 7-9
 (2131)
white prepupae new
 (2474)
white prepupae 12hr
 (2619)
white prepupae 24hr
 (3034)
pupae 2d postWPP
 (2595)
pupae 3d postWPP
 (1672)
pupae 4d postWPP
 (1094)
adult male 01day
 (1264)
adult male 05day
 (1515)
adult male 30day
 (1413)
adult female 01day
 (1865)
adult female 05day
 (2524)
adult female 30day
 (2633)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4386)
embryo 02-04hr
 (4249)
embryo 04-06hr
 (4349)
embryo 06-08hr
 (6106)
embryo 08-10hr
 (5648)
embryo 10-12hr
 (4949)
embryo 12-14hr
 (4333)
embryo 14-16hr
 (3491)
embryo 16-18hr
 (2816)
embryo 18-20hr
 (2481)
embryo 20-22hr
 (1623)
embryo 22-24hr
 (1797)
larva L1
 (1562)
larva L2
 
 1153
larva L3 12hr old
 
 1048
larva L3 puffstage 1-2
 
 1098
larva L3 puffstage 3-6
 (1697)
larva L3 puffstage 7-9
 (2131)
white prepupae new
 (2474)
white prepupae 12hr
 (2619)
white prepupae 24hr
 (3034)
pupae 2d postWPP
 (2595)
pupae 3d postWPP
 (1672)
pupae 4d postWPP
 
 1094
adult male 01day
 
 1264
adult male 05day
 (1515)
adult male 30day
 1413
adult female 01day
 (1865)
adult female 05day
 (2524)
adult female 30day
 (2633)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4386
embryo 02-04hr
 
 4249
embryo 04-06hr
 
 4349
embryo 06-08hr
 
 6106
embryo 08-10hr
 
 5648
embryo 10-12hr
 
 4949
embryo 12-14hr
 
 4333
embryo 14-16hr
 
 3491
embryo 16-18hr
 
 2816
embryo 18-20hr
 
 2481
embryo 20-22hr
 
 1623
embryo 22-24hr
 
 1797
larva L1
 
 1562
larva L2
 
 1153
larva L3 12hr old
 
 1048
larva L3 puffstage 1-2
 
 1098
larva L3 puffstage 3-6
 
 1697
larva L3 puffstage 7-9
 
 2131
white prepupae new
 
 2474
white prepupae 12hr
 
 2619
white prepupae 24hr
 
 3034
pupae 2d postWPP
 
 2595
pupae 3d postWPP
 
 1672
pupae 4d postWPP
 
 1094
adult male 01day
 
 1264
adult male 05day
 
 1515
adult male 30day
 
 1413
adult female 01day
 
 1865
adult female 05day
 
 2524
adult female 30day
 
 2633
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4386
embryo 02-04hr
 
 4249
embryo 04-06hr
 
 4349
embryo 06-08hr
 
 6106
embryo 08-10hr
 
 5648
embryo 10-12hr
 
 4949
embryo 12-14hr
 
 4333
embryo 14-16hr
 
 3491
embryo 16-18hr
 
 2816
embryo 18-20hr
 
 2481
embryo 20-22hr
 
 1623
embryo 22-24hr
 
 1797
larva L1
 
 1562
larva L2
 
 1153
larva L3 12hr old
 
 1048
larva L3 puffstage 1-2
 
 1098
larva L3 puffstage 3-6
 
 1697
larva L3 puffstage 7-9
 
 2131
white prepupae new
 
 2474
white prepupae 12hr
 
 2619
white prepupae 24hr
 
 3034
pupae 2d postWPP
 
 2595
pupae 3d postWPP
 
 1672
pupae 4d postWPP
 
 1094
adult male 01day
 
 1264
adult male 05day
 
 1515
adult male 30day
 
 1413
adult female 01day
 
 1865
adult female 05day
 
 2524
adult female 30day
 
 2633
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0020510 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 4386
embryo 02-04hr
 
 4249
embryo 04-06hr
 
 4349
embryo 06-08hr
 
 6106
embryo 08-10hr
 
 5648
embryo 10-12hr
 
 4949
embryo 12-14hr
 
 4333
embryo 14-16hr
 
 3491
embryo 16-18hr
 
 2816
embryo 18-20hr
 
 2481
embryo 20-22hr
 
 1623
embryo 22-24hr
 
 1797
larva L1
 
 1562
larva L2
 
 1153
larva L3 12hr old
 
 1048
larva L3 puffstage 1-2
 
 1098
larva L3 puffstage 3-6
 
 1697
larva L3 puffstage 7-9
 
 2131
white prepupae new
 
 2474
white prepupae 12hr
 
 2619
white prepupae 24hr
 
 3034
pupae 2d postWPP
 
 2595
pupae 3d postWPP
 
 1672
pupae 4d postWPP
 
 1094
adult male 01day
 
 1264
adult male 05day
 
 1515
adult male 30day
 
 1413
adult female 01day
 
 1865
adult female 05day
 
 2524
adult female 30day
 
 2633
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4386)
embryo 02-04hr
 (4249)
embryo 04-06hr
 (4349)
embryo 06-08hr
 (6106)
embryo 08-10hr
 (5648)
embryo 10-12hr
 (4949)
embryo 12-14hr
 (4333)
embryo 14-16hr
 (3491)
embryo 16-18hr
 (2816)
embryo 18-20hr
 (2481)
embryo 20-22hr
 (1623)
embryo 22-24hr
 (1797)
larva L1
 (1562)
larva L2
 (1153)
larva L3 12hr old
 (1048)
larva L3 puffstage 1-2
 (1098)
larva L3 puffstage 3-6
 (1697)
larva L3 puffstage 7-9
 (2131)
white prepupae new
 (2474)
white prepupae 12hr
 (2619)
white prepupae 24hr
 (3034)
pupae 2d postWPP
 (2595)
pupae 3d postWPP
 (1672)
pupae 4d postWPP
 (1094)
adult male 01day
 (1264)
adult male 05day
 (1515)
adult male 30day
 (1413)
adult female 01day
 (1865)
adult female 05day
 (2524)
adult female 30day
 (2633)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4386)
embryo 02-04hr
 (4249)
embryo 04-06hr
 (4349)
embryo 06-08hr
 (6106)
embryo 08-10hr
 (5648)
embryo 10-12hr
 (4949)
embryo 12-14hr
 (4333)
embryo 14-16hr
 (3491)
embryo 16-18hr
 (2816)
embryo 18-20hr
 (2481)
embryo 20-22hr
 1623
embryo 22-24hr
 1797
larva L1
 1562
larva L2
 
 1153
larva L3 12hr old
 
 1048
larva L3 puffstage 1-2
 
 1098
larva L3 puffstage 3-6
 1697
larva L3 puffstage 7-9
 2131
white prepupae new
 (2474)
white prepupae 12hr
 (2619)
white prepupae 24hr
 (3034)
pupae 2d postWPP
 (2595)
pupae 3d postWPP
 1672
pupae 4d postWPP
 
 1094
adult male 01day
 
 1264
adult male 05day
 1515
adult male 30day
 1413
adult female 01day
 1865
adult female 05day
 (2524)
adult female 30day
 (2633)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4386
embryo 02-04hr
 
 4249
embryo 04-06hr
 
 4349
embryo 06-08hr
 
 6106
embryo 08-10hr
 
 5648
embryo 10-12hr
 
 4949
embryo 12-14hr
 
 4333
embryo 14-16hr
 
 3491
embryo 16-18hr
 
 2816
embryo 18-20hr
 
 2481
embryo 20-22hr
 
 1623
embryo 22-24hr
 
 1797
larva L1
 
 1562
larva L2
 
 1153
larva L3 12hr old
 
 1048
larva L3 puffstage 1-2
 
 1098
larva L3 puffstage 3-6
 
 1697
larva L3 puffstage 7-9
 
 2131
white prepupae new
 
 2474
white prepupae 12hr
 
 2619
white prepupae 24hr
 
 3034
pupae 2d postWPP
 
 2595
pupae 3d postWPP
 
 1672
pupae 4d postWPP
 
 1094
adult male 01day
 
 1264
adult male 05day
 
 1515
adult male 30day
 
 1413
adult female 01day
 
 1865
adult female 05day
 
 2524
adult female 30day
 
 2633
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4386
embryo 02-04hr
 
 4249
embryo 04-06hr
 
 4349
embryo 06-08hr
 
 6106
embryo 08-10hr
 
 5648
embryo 10-12hr
 
 4949
embryo 12-14hr
 
 4333
embryo 14-16hr
 
 3491
embryo 16-18hr
 
 2816
embryo 18-20hr
 
 2481
embryo 20-22hr
 
 1623
embryo 22-24hr
 
 1797
larva L1
 
 1562
larva L2
 
 1153
larva L3 12hr old
 
 1048
larva L3 puffstage 1-2
 
 1098
larva L3 puffstage 3-6
 
 1697
larva L3 puffstage 7-9
 
 2131
white prepupae new
 
 2474
white prepupae 12hr
 
 2619
white prepupae 24hr
 
 3034
pupae 2d postWPP
 
 2595
pupae 3d postWPP
 
 1672
pupae 4d postWPP
 
 1094
adult male 01day
 
 1264
adult male 05day
 
 1515
adult male 30day
 
 1413
adult female 01day
 
 1865
adult female 05day
 
 2524
adult female 30day
 
 2633
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0020510


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0020510
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0020510 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 356.475
Larval Midgut
 
 296.4
Larval Hindgut
 
 286.9
Larval Malpighian Tubules
 
 225.8
Larval Fat Body
 
 221.9
Larval Salivary Gland
 
 306.4
Larval Trachea
 
 255.4
Larval Carcass
 
 288.125
Adult Head
 
 152.9
Adult Eye
 
 136.925
Adult Brain
 
 262.1
Adult Thoracic-Abdominal Ganglion
 
 219.4
Adult Crop
 
 210.2
Adult Midgut
 
 219.8
Adult Hindgut
 
 212.1
Adult Malpighian Tubules
 
 155.2
Adult Fat Body
 
 158.3
Adult Salivary Gland
 
 233.4
Adult Heart
 
 147.025
Adult VirginFemale Spermatheca
 
 149
Adult InseminatedFemale Spermatheca
 
 156.4
Adult Ovary
 
 307.4
Adult Testis
 
 190.6
Adult Male Accessory Gland
 
 231.1
Adult Carcass
 
 144.9
Expression Level Scale
 None 
 Low 
 Moderate 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 356.475
Larval Midgut
 
 296.4
Larval Hindgut
 
 286.9
Larval Malpighian Tubules
 
 225.8
Larval Fat Body
 
 221.9
Larval Salivary Gland
 
 306.4
Larval Trachea
 
 255.4
Larval Carcass
 
 288.125
Adult Head
 
 152.9
Adult Eye
 
 136.925
Adult Brain
 
 262.1
Adult Thoracic-Abdominal Ganglion
 
 219.4
Adult Crop
 
 210.2
Adult Midgut
 
 219.8
Adult Hindgut
 
 212.1
Adult Malpighian Tubules
 
 155.2
Adult Fat Body
 
 158.3
Adult Salivary Gland
 
 233.4
Adult Heart
 
 147.025
Adult VirginFemale Spermatheca
 
 149
Adult InseminatedFemale Spermatheca
 
 156.4
Adult Ovary
 
 307.4
Adult Testis
 
 190.6
Adult Male Accessory Gland
 
 231.1
Adult Carcass
 
 144.9
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 356.475
Larval Midgut
 
 296.4
Larval Hindgut
 
 286.9
Larval Malpighian Tubules
 
 225.8
Larval Fat Body
 
 221.9
Larval Salivary Gland
 
 306.4
Larval Trachea
 
 255.4
Larval Carcass
 
 288.125
Adult Head
 
 152.9
Adult Eye
 
 136.925
Adult Brain
 
 262.1
Adult Thoracic-Abdominal Ganglion
 
 219.4
Adult Crop
 
 210.2
Adult Midgut
 
 219.8
Adult Hindgut
 
 212.1
Adult Malpighian Tubules
 
 155.2
Adult Fat Body
 
 158.3
Adult Salivary Gland
 
 233.4
Adult Heart
 
 147.025
Adult VirginFemale Spermatheca
 
 149
Adult InseminatedFemale Spermatheca
 
 156.4
Adult Ovary
 
 307.4
Adult Testis
 
 190.6
Adult Male Accessory Gland
 
 231.1
Adult Carcass
 
 144.9
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 356.475
Larval Midgut
 
 296.4
Larval Hindgut
 
 286.9
Larval Malpighian Tubules
 
 225.8
Larval Fat Body
 
 221.9
Larval Salivary Gland
 
 306.4
Larval Trachea
 
 255.4
Larval Carcass
 
 288.125
Adult Head
 
 152.9
Adult Eye
 
 136.925
Adult Brain
 
 262.1
Adult Thoracic-Abdominal Ganglion
 
 219.4
Adult Crop
 
 210.2
Adult Midgut
 
 219.8
Adult Hindgut
 
 212.1
Adult Malpighian Tubules
 
 155.2
Adult Fat Body
 
 158.3
Adult Salivary Gland
 
 233.4
Adult Heart
 
 147.025
Adult VirginFemale Spermatheca
 
 149
Adult InseminatedFemale Spermatheca
 
 156.4
Adult Ovary
 
 307.4
Adult Testis
 
 190.6
Adult Male Accessory Gland
 
 231.1
Adult Carcass
 
 144.9
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0020510 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 356.475
Larval Midgut
 
 296.4
Larval Hindgut
 
 286.9
Larval Malpighian Tubules
 
 225.8
Larval Fat Body
 
 221.9
Larval Salivary Gland
 
 306.4
Larval Trachea
 
 255.4
Larval Carcass
 
 288.125
Adult Head
 
 152.9
Adult Eye
 
 136.925
Adult Brain
 
 262.1
Adult Thoracic-Abdominal Ganglion
 
 219.4
Adult Crop
 
 210.2
Adult Midgut
 
 219.8
Adult Hindgut
 
 212.1
Adult Malpighian Tubules
 
 155.2
Adult Fat Body
 
 158.3
Adult Salivary Gland
 
 233.4
Adult Heart
 
 147.025
Adult VirginFemale Spermatheca
 
 149
Adult InseminatedFemale Spermatheca
 
 156.4
Adult Ovary
 
 307.4
Adult Testis
 
 190.6
Adult Male Accessory Gland
 
 231.1
Adult Carcass
 
 144.9
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 356.475
Larval Midgut
 
 296.4
Larval Hindgut
 
 286.9
Larval Malpighian Tubules
 
 225.8
Larval Fat Body
 
 221.9
Larval Salivary Gland
 
 306.4
Larval Trachea
 
 255.4
Larval Carcass
 
 288.125
Adult Head
 
 152.9
Adult Eye
 
 136.925
Adult Brain
 
 262.1
Adult Thoracic-Abdominal Ganglion
 
 219.4
Adult Crop
 
 210.2
Adult Midgut
 
 219.8
Adult Hindgut
 
 212.1
Adult Malpighian Tubules
 
 155.2
Adult Fat Body
 
 158.3
Adult Salivary Gland
 
 233.4
Adult Heart
 
 147.025
Adult VirginFemale Spermatheca
 
 149
Adult InseminatedFemale Spermatheca
 
 156.4
Adult Ovary
 
 307.4
Adult Testis
 
 190.6
Adult Male Accessory Gland
 
 231.1
Adult Carcass
 
 144.9
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 356.475
Larval Midgut
 
 296.4
Larval Hindgut
 
 286.9
Larval Malpighian Tubules
 
 225.8
Larval Fat Body
 
 221.9
Larval Salivary Gland
 
 306.4
Larval Trachea
 
 255.4
Larval Carcass
 
 288.125
Adult Head
 
 152.9
Adult Eye
 
 136.925
Adult Brain
 
 262.1
Adult Thoracic-Abdominal Ganglion
 
 219.4
Adult Crop
 
 210.2
Adult Midgut
 
 219.8
Adult Hindgut
 
 212.1
Adult Malpighian Tubules
 
 155.2
Adult Fat Body
 
 158.3
Adult Salivary Gland
 
 233.4
Adult Heart
 
 147.025
Adult VirginFemale Spermatheca
 
 149
Adult InseminatedFemale Spermatheca
 
 156.4
Adult Ovary
 
 307.4
Adult Testis
 
 190.6
Adult Male Accessory Gland
 
 231.1
Adult Carcass
 
 144.9
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 356.475
Larval Midgut
 
 296.4
Larval Hindgut
 
 286.9
Larval Malpighian Tubules
 
 225.8
Larval Fat Body
 
 221.9
Larval Salivary Gland
 
 306.4
Larval Trachea
 
 255.4
Larval Carcass
 
 288.125
Adult Head
 
 152.9
Adult Eye
 
 136.925
Adult Brain
 
 262.1
Adult Thoracic-Abdominal Ganglion
 
 219.4
Adult Crop
 
 210.2
Adult Midgut
 
 219.8
Adult Hindgut
 
 212.1
Adult Malpighian Tubules
 
 155.2
Adult Fat Body
 
 158.3
Adult Salivary Gland
 
 233.4
Adult Heart
 
 147.025
Adult VirginFemale Spermatheca
 
 149
Adult InseminatedFemale Spermatheca
 
 156.4
Adult Ovary
 
 307.4
Adult Testis
 
 190.6
Adult Male Accessory Gland
 
 231.1
Adult Carcass
 
 144.9
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 152.9
 
NA 
Eye
 
 136.925
 
NA 
Brain
 
 262.1
 
356.475 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 219.4
 
NA 
Crop
 
 210.2
 
296.4 
Midgut
 
 219.8
 
286.9 
Hindgut
 
 212.1
 
225.8 
Malpighian Tubules
 
 155.2
 
221.9 
Fat Body
 
 158.3
 
306.4 
Salivary Gland
 
 233.4
 
NA 
Heart
 
 147.025
 
255.4 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 149
 
NA 
InseminatedFemale Spermatheca
 
 156.4
 
NA 
Ovary
 
 307.4
 
NA 
Testis
 
 190.6
 
NA 
Male Accessory Gland
 
 231.1
 
288.125 
Carcass
 
 144.9

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
chaeta & mesothoracic tergum | ectopic, with Scer\GAL4sca-537.4
hide Classical Alleles ( 5 )
For All Classical Alleles Show

Allele of AbiClassMutagenStocksKnown lesion
AbiEY204231 --
AbiKOloss of function allele0 Yes
AbiP1hypomorphic allele - genetic evidence
0 --
AbiP2loss of function allele
0 --
Abiunspecified
0 --
hide Alleles Carried on Transgenic Constructs ( 13 )
For All Alleles Carried on Transgenic Constructs Show

Allele of AbiClassMutagenStocksKnown lesion
AbiGD143021 Yes
AbiKK1080711 Yes
Abia.Act5C0 Yes
AbiAct5C.T:Ivir\HA10 Yes
AbidsRNA.cKa0 Yes
AbidsRNA.cRa0 Yes
AbidsRNA.Scer\UAS0 Yes
AbiEndsOut.L0 Yes
AbiScer\UAS.T:Avic\GFP0 Yes
AbiScer\UAS.T:Myr10 Yes
AbiΔC.Scer\UAS.T:Myr10 Yes
AbiΔN.Scer\UAS.T:Myr10 Yes
AbiΔSH3.Act5C.T:Ivir\HA10 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
characterization construct
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
hide Gene Ontology: Function, Process & Cellular Component ( 18 unique terms )
hide Terms Based on Experimental Evidence ( 17 terms )
Molecular Function
CV term
References
inferred from physical interaction with Abl
inferred from physical interaction with Hem AND inferred from physical interaction with WASp
inferred from physical interaction with Ptp61F
Biological Process
CV term
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from genetic interaction with Abl
inferred from mutant phenotype
Cellular Component
CV term
References
inferred from direct assay
hide Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term
References
inferred from sequence or structural similarity with EMBL:U17698
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Abi allele
Gene
References
hide External Data
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 3 )
Bloomington
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 94 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for identity of: Abi CG9749
Source for database merge of
Additional comments
hide Other Comments
S2 cells treated with dsRNA generated against this gene show reduced phagocytosis of Candida albicans compared to untreated cells.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
dsRNA made from templates generated with primers directed against this gene is tested in an RNAi screen for effects on actin-based lamella formation.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym
Name Synonym
Abelson Interacting Protein
Abelson interacting protein
Secondary FlyBase IDs
hide References ( 55 )
Generate a list of
List References by type
hide Recent research papers ( 7 )
Gautier et al., 2011, J. Cell Sci. 124(20): 3414--3427
Clathrin is required for Scar/Wave-mediated lamellipodium formation. [FBrf0216441]
Kondylis et al., 2011, PLoS ONE 6(2): e17173
Identification of ER Proteins Involved in the Functional Organisation of the Early Secretory Pathway in Drosophila Cells by a Targeted RNAi Screen. [FBrf0213167]
Stephan et al., 2011, Mol. Biol. Cell 22(21): 4079--4092
Membrane-targeted WAVE mediates photoreceptor axon targeting in the absence of the WAVE complex in Drosophila. [FBrf0216499]
D'Ambrosio and Vale, 2010, J. Cell Biol. 191(3): 471--478
A whole genome RNAi screen of Drosophila S2 cell spreading performed using automated computational image analysis. [FBrf0212211]
Georgiou and Baum, 2010, J. Cell Sci. 123(7): 1089--1098
Polarity proteins and Rho GTPases cooperate to spatially organise epithelial actin-based protrusions. [FBrf0214990]
Gohl et al., 2010, J. Biol. Chem. 285(51): 40171--40179
WAVE Forms Hetero- and Homo-oligomeric Complexes at Integrin Junctions in Drosophila Visualized by Bimolecular Fluorescence Complementation. [FBrf0212496]
Wang et al., 2010, J. Cell Sci. 123(9): 1546--1556
Drosophila twinfilin is required for cell migration and synaptic endocytosis. [FBrf0210650]
hide Recent reviews (0)
All reviews listed in FlyBase were published before 2010