A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\Orc1

General Information
SymbolDmel\Orc1SpeciesD. melanogaster
NameOrigin recognition complex subunit 1Annotation symbolCG10667
Feature typeprotein_coding_geneFlyBase IDFBgn0022772
Gene Model StatusCurrent Stock availability 2 publicly available
Also Known AsDmORC1, ORC
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map43D1-43D2Sequence location2R:3,409,940..3,413,213 [-]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene Origin recognition complex subunit 1 is referred to in FlyBase by the symbol Dmel\Orc1 (CG10667, FBgn0022772). It is a protein_coding_gene from Drosophila melanogaster. It is reported to have molecular function: DNA binding. There is experimental evidence that it is involved in the biological process: DNA amplification; DNA-dependent DNA replication initiation; cell proliferation; neurogenesis. 16 alleles are reported. The phenotypes of these alleles are annotated with: chorion; eye; trichogen cell; interommatidial bristle; egg; mesothoracic tergum; ommatidium; dorsal appendage; stage S10B oocyte; morphogenetic furrow. It has one annotated transcript and one annotated polypeptide. Protein features are: ATPase, AAA+ type, core; ATPase, AAA-type, core; Bromo adjacent homology (BAH) domain; CDC6, C-terminal; Origin recognition complex, subunit 1. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval salivary gland. Comments on Affy2 ProbeSet: ProbeSet 1626652_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of Orc1. Gene sequence location is 2R:3409940..3413213.
External Summaries
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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
References
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
43D1-43D2  
Limits computationally determined from genome sequence between P{lacW}cosk16101 and P{EP}CG1600EP398  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
43E1-43E2  
(determined by in situ hybridisation)  
43D1-43D7  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\Orc1 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0088904 FBtr0088959 FBtr0088958 FBtr0088957 FBtr0088956 FBpp0087978 FBpp0088033 FBpp0088032 FBpp0088030 FBpp0088031 FBti0125008_2 FBti0125008_1 FBti0125009_2 FBti0125009_1 FBti0116090
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0088959
  3146
  924
Additional Transcript Data & Comments
Reported size (kB)
2.7 (northern blot)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0088033  
103.3  
924  
9.84  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
protein binding site
bound_moiety=E2f-XP
comment=One of two overlapping candidate E2f protein binding sites, which, when mutated, lose the ability to compete for E2f binding
evidence=experimental
protein binding site
bound_moiety=E2f-XP
comment=One of two overlapping candidate E2f protein binding sites, which, when mutated, lose the ability to compete for E2f binding
evidence=experimental
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
northern blot
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Orc1 transcripts are maternally deposited and are abundant in early embryos. Levels taper off in later embryonic and larval stages.
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
immunolocalization
Stage
Tissue/Position (including subcellular localization)
Reference
western blot
Stage
Tissue/Position (including subcellular localization)
Reference
Comment:strongest expression 0-6 hrs AEL; sharply reduced by 9-12 hr AEL
Additional Descriptive Data
Orc1 protein is present in the nuclei of mitotically active cells
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view CG2144-RA Orc1-RA CG1600-RB CG1600-RC CG1600-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0022772


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0022772
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed within 00-06 hour embryonic stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0022772 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 11284
embryo 02-04hr
 
 7238
embryo 04-06hr
 
 5275
embryo 06-08hr
 
 4321
embryo 08-10hr
 
 4142
embryo 10-12hr
 
 2808
embryo 12-14hr
 
 1772
embryo 14-16hr
 
 2689
embryo 16-18hr
 
 2060
embryo 18-20hr
 
 877
embryo 20-22hr
 
 2149
embryo 22-24hr
 
 2011
larva L1
 
 394
larva L2
 
 325
larva L3 12hr old
 
 213
larva L3 puffstage 1-2
 
 169
larva L3 puffstage 3-6
 
 229
larva L3 puffstage 7-9
 
 226
white prepupae new
 
 218
white prepupae 12hr
 
 400
white prepupae 24hr
 
 291
pupae 2d postWPP
 
 82
pupae 3d postWPP
 
 40
pupae 4d postWPP
 
 126
adult male 01day
 
 54
adult male 05day
 
 45
adult male 30day
 
 76
adult female 01day
 
 1806
adult female 05day
 
 4028
adult female 30day
 
 4470
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (11284)
embryo 02-04hr
 (7238)
embryo 04-06hr
 (5275)
embryo 06-08hr
 (4321)
embryo 08-10hr
 (4142)
embryo 10-12hr
 (2808)
embryo 12-14hr
 (1772)
embryo 14-16hr
 (2689)
embryo 16-18hr
 (2060)
embryo 18-20hr
 (877)
embryo 20-22hr
 (2149)
embryo 22-24hr
 (2011)
larva L1
 (394)
larva L2
 (325)
larva L3 12hr old
 (213)
larva L3 puffstage 1-2
 (169)
larva L3 puffstage 3-6
 (229)
larva L3 puffstage 7-9
 (226)
white prepupae new
 (218)
white prepupae 12hr
 (400)
white prepupae 24hr
 (291)
pupae 2d postWPP
 
 82
pupae 3d postWPP
 
 40
pupae 4d postWPP
 (126)
adult male 01day
 
 54
adult male 05day
 
 45
adult male 30day
 
 76
adult female 01day
 (1806)
adult female 05day
 (4028)
adult female 30day
 (4470)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (11284)
embryo 02-04hr
 (7238)
embryo 04-06hr
 (5275)
embryo 06-08hr
 (4321)
embryo 08-10hr
 (4142)
embryo 10-12hr
 (2808)
embryo 12-14hr
 (1772)
embryo 14-16hr
 (2689)
embryo 16-18hr
 (2060)
embryo 18-20hr
 
 877
embryo 20-22hr
 (2149)
embryo 22-24hr
 (2011)
larva L1
 
 394
larva L2
 
 325
larva L3 12hr old
 
 213
larva L3 puffstage 1-2
 
 169
larva L3 puffstage 3-6
 
 229
larva L3 puffstage 7-9
 
 226
white prepupae new
 
 218
white prepupae 12hr
 
 400
white prepupae 24hr
 
 291
pupae 2d postWPP
 
 82
pupae 3d postWPP
 
 40
pupae 4d postWPP
 
 126
adult male 01day
 
 54
adult male 05day
 
 45
adult male 30day
 
 76
adult female 01day
 (1806)
adult female 05day
 (4028)
adult female 30day
 (4470)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 (11284)
embryo 02-04hr
 
 7238
embryo 04-06hr
 
 5275
embryo 06-08hr
 
 4321
embryo 08-10hr
 
 4142
embryo 10-12hr
 
 2808
embryo 12-14hr
 
 1772
embryo 14-16hr
 
 2689
embryo 16-18hr
 
 2060
embryo 18-20hr
 
 877
embryo 20-22hr
 
 2149
embryo 22-24hr
 
 2011
larva L1
 
 394
larva L2
 
 325
larva L3 12hr old
 
 213
larva L3 puffstage 1-2
 
 169
larva L3 puffstage 3-6
 
 229
larva L3 puffstage 7-9
 
 226
white prepupae new
 
 218
white prepupae 12hr
 
 400
white prepupae 24hr
 
 291
pupae 2d postWPP
 
 82
pupae 3d postWPP
 
 40
pupae 4d postWPP
 
 126
adult male 01day
 
 54
adult male 05day
 
 45
adult male 30day
 
 76
adult female 01day
 
 1806
adult female 05day
 
 4028
adult female 30day
 
 4470
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 11284
embryo 02-04hr
 
 7238
embryo 04-06hr
 
 5275
embryo 06-08hr
 
 4321
embryo 08-10hr
 
 4142
embryo 10-12hr
 
 2808
embryo 12-14hr
 
 1772
embryo 14-16hr
 
 2689
embryo 16-18hr
 
 2060
embryo 18-20hr
 
 877
embryo 20-22hr
 
 2149
embryo 22-24hr
 
 2011
larva L1
 
 394
larva L2
 
 325
larva L3 12hr old
 
 213
larva L3 puffstage 1-2
 
 169
larva L3 puffstage 3-6
 
 229
larva L3 puffstage 7-9
 
 226
white prepupae new
 
 218
white prepupae 12hr
 
 400
white prepupae 24hr
 
 291
pupae 2d postWPP
 
 82
pupae 3d postWPP
 
 40
pupae 4d postWPP
 
 126
adult male 01day
 
 54
adult male 05day
 
 45
adult male 30day
 
 76
adult female 01day
 
 1806
adult female 05day
 
 4028
adult female 30day
 
 4470
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0022772 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 11284
embryo 02-04hr
 
 7238
embryo 04-06hr
 
 5275
embryo 06-08hr
 
 4321
embryo 08-10hr
 
 4142
embryo 10-12hr
 
 2808
embryo 12-14hr
 
 1772
embryo 14-16hr
 
 2689
embryo 16-18hr
 
 2060
embryo 18-20hr
 
 877
embryo 20-22hr
 
 2149
embryo 22-24hr
 
 2011
larva L1
 
 394
larva L2
 
 325
larva L3 12hr old
 
 213
larva L3 puffstage 1-2
 
 169
larva L3 puffstage 3-6
 
 229
larva L3 puffstage 7-9
 
 226
white prepupae new
 
 218
white prepupae 12hr
 
 400
white prepupae 24hr
 
 291
pupae 2d postWPP
 
 82
pupae 3d postWPP
 
 40
pupae 4d postWPP
 
 126
adult male 01day
 
 54
adult male 05day
 
 45
adult male 30day
 
 76
adult female 01day
 
 1806
adult female 05day
 
 4028
adult female 30day
 
 4470
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (11284)
embryo 02-04hr
 (7238)
embryo 04-06hr
 (5275)
embryo 06-08hr
 (4321)
embryo 08-10hr
 (4142)
embryo 10-12hr
 (2808)
embryo 12-14hr
 (1772)
embryo 14-16hr
 (2689)
embryo 16-18hr
 (2060)
embryo 18-20hr
 (877)
embryo 20-22hr
 (2149)
embryo 22-24hr
 (2011)
larva L1
 (394)
larva L2
 (325)
larva L3 12hr old
 (213)
larva L3 puffstage 1-2
 (169)
larva L3 puffstage 3-6
 (229)
larva L3 puffstage 7-9
 (226)
white prepupae new
 (218)
white prepupae 12hr
 (400)
white prepupae 24hr
 (291)
pupae 2d postWPP
 
 82
pupae 3d postWPP
 
 40
pupae 4d postWPP
 126
adult male 01day
 
 54
adult male 05day
 
 45
adult male 30day
 
 76
adult female 01day
 (1806)
adult female 05day
 (4028)
adult female 30day
 (4470)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (11284)
embryo 02-04hr
 (7238)
embryo 04-06hr
 (5275)
embryo 06-08hr
 (4321)
embryo 08-10hr
 (4142)
embryo 10-12hr
 (2808)
embryo 12-14hr
 1772
embryo 14-16hr
 (2689)
embryo 16-18hr
 2060
embryo 18-20hr
 
 877
embryo 20-22hr
 2149
embryo 22-24hr
 2011
larva L1
 
 394
larva L2
 
 325
larva L3 12hr old
 
 213
larva L3 puffstage 1-2
 
 169
larva L3 puffstage 3-6
 
 229
larva L3 puffstage 7-9
 
 226
white prepupae new
 
 218
white prepupae 12hr
 
 400
white prepupae 24hr
 
 291
pupae 2d postWPP
 
 82
pupae 3d postWPP
 
 40
pupae 4d postWPP
 
 126
adult male 01day
 
 54
adult male 05day
 
 45
adult male 30day
 
 76
adult female 01day
 1806
adult female 05day
 (4028)
adult female 30day
 (4470)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 11284
embryo 02-04hr
 
 7238
embryo 04-06hr
 
 5275
embryo 06-08hr
 
 4321
embryo 08-10hr
 
 4142
embryo 10-12hr
 
 2808
embryo 12-14hr
 
 1772
embryo 14-16hr
 
 2689
embryo 16-18hr
 
 2060
embryo 18-20hr
 
 877
embryo 20-22hr
 
 2149
embryo 22-24hr
 
 2011
larva L1
 
 394
larva L2
 
 325
larva L3 12hr old
 
 213
larva L3 puffstage 1-2
 
 169
larva L3 puffstage 3-6
 
 229
larva L3 puffstage 7-9
 
 226
white prepupae new
 
 218
white prepupae 12hr
 
 400
white prepupae 24hr
 
 291
pupae 2d postWPP
 
 82
pupae 3d postWPP
 
 40
pupae 4d postWPP
 
 126
adult male 01day
 
 54
adult male 05day
 
 45
adult male 30day
 
 76
adult female 01day
 
 1806
adult female 05day
 
 4028
adult female 30day
 
 4470
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 11284
embryo 02-04hr
 
 7238
embryo 04-06hr
 
 5275
embryo 06-08hr
 
 4321
embryo 08-10hr
 
 4142
embryo 10-12hr
 
 2808
embryo 12-14hr
 
 1772
embryo 14-16hr
 
 2689
embryo 16-18hr
 
 2060
embryo 18-20hr
 
 877
embryo 20-22hr
 
 2149
embryo 22-24hr
 
 2011
larva L1
 
 394
larva L2
 
 325
larva L3 12hr old
 
 213
larva L3 puffstage 1-2
 
 169
larva L3 puffstage 3-6
 
 229
larva L3 puffstage 7-9
 
 226
white prepupae new
 
 218
white prepupae 12hr
 
 400
white prepupae 24hr
 
 291
pupae 2d postWPP
 
 82
pupae 3d postWPP
 
 40
pupae 4d postWPP
 
 126
adult male 01day
 
 54
adult male 05day
 
 45
adult male 30day
 
 76
adult female 01day
 
 1806
adult female 05day
 
 4028
adult female 30day
 
 4470
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0022772


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0022772
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval salivary gland.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0022772 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 109.775
Larval Midgut
 
 21
Larval Hindgut
 
 22.7
Larval Malpighian Tubules no informative data
Larval Fat Body no informative data
Larval Salivary Gland
 
 153.9
Larval Trachea
 
 41.45
Larval Carcass
 
 30.55
Adult Head no informative data
Adult Eye
 
 7.15
Adult Brain
 
 4.6
Adult Thoracic-Abdominal Ganglion
 
 4.5
Adult Crop no informative data
Adult Midgut no informative data
Adult Hindgut
 
 9.2
Adult Malpighian Tubules no informative data
Adult Fat Body no informative data
Adult Salivary Gland no informative data
Adult Heart
 
 8.475
Adult VirginFemale Spermatheca
 
 20.1
Adult InseminatedFemale Spermatheca
 
 25.4
Adult Ovary
 
 687.8
Adult Testis
 
 5.4
Adult Male Accessory Gland
 
 22.8
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.775
Larval Midgut
 
 21
Larval Hindgut
 
 22.7
Larval Malpighian Tubules no informative data
Larval Fat Body no informative data
Larval Salivary Gland
 
 153.9
Larval Trachea
 
 41.45
Larval Carcass
 
 30.55
Adult Head no informative data
Adult Eye
 
 7.15
Adult Brain
 
 4.6
Adult Thoracic-Abdominal Ganglion
 
 4.5
Adult Crop no informative data
Adult Midgut no informative data
Adult Hindgut
 
 9.2
Adult Malpighian Tubules no informative data
Adult Fat Body no informative data
Adult Salivary Gland no informative data
Adult Heart
 
 8.475
Adult VirginFemale Spermatheca
 
 20.1
Adult InseminatedFemale Spermatheca
 
 25.4
Adult Ovary
 (687.8)
Adult Testis
 
 5.4
Adult Male Accessory Gland
 
 22.8
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.775
Larval Midgut
 
 21
Larval Hindgut
 
 22.7
Larval Malpighian Tubules no informative data
Larval Fat Body no informative data
Larval Salivary Gland
 
 153.9
Larval Trachea
 
 41.45
Larval Carcass
 
 30.55
Adult Head no informative data
Adult Eye
 
 7.15
Adult Brain
 
 4.6
Adult Thoracic-Abdominal Ganglion
 
 4.5
Adult Crop no informative data
Adult Midgut no informative data
Adult Hindgut
 
 9.2
Adult Malpighian Tubules no informative data
Adult Fat Body no informative data
Adult Salivary Gland no informative data
Adult Heart
 
 8.475
Adult VirginFemale Spermatheca
 
 20.1
Adult InseminatedFemale Spermatheca
 
 25.4
Adult Ovary
 
 687.8
Adult Testis
 
 5.4
Adult Male Accessory Gland
 
 22.8
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.775
Larval Midgut
 
 21
Larval Hindgut
 
 22.7
Larval Malpighian Tubules no informative data
Larval Fat Body no informative data
Larval Salivary Gland
 
 153.9
Larval Trachea
 
 41.45
Larval Carcass
 
 30.55
Adult Head no informative data
Adult Eye
 
 7.15
Adult Brain
 
 4.6
Adult Thoracic-Abdominal Ganglion
 
 4.5
Adult Crop no informative data
Adult Midgut no informative data
Adult Hindgut
 
 9.2
Adult Malpighian Tubules no informative data
Adult Fat Body no informative data
Adult Salivary Gland no informative data
Adult Heart
 
 8.475
Adult VirginFemale Spermatheca
 
 20.1
Adult InseminatedFemale Spermatheca
 
 25.4
Adult Ovary
 
 687.8
Adult Testis
 
 5.4
Adult Male Accessory Gland
 
 22.8
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0022772 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 109.775
Larval Midgut
 
 21
Larval Hindgut
 
 22.7
Larval Malpighian Tubules no informative data
Larval Fat Body no informative data
Larval Salivary Gland
 
 153.9
Larval Trachea
 
 41.45
Larval Carcass
 
 30.55
Adult Head no informative data
Adult Eye
 
 7.15
Adult Brain
 
 4.6
Adult Thoracic-Abdominal Ganglion
 
 4.5
Adult Crop no informative data
Adult Midgut no informative data
Adult Hindgut
 
 9.2
Adult Malpighian Tubules no informative data
Adult Fat Body no informative data
Adult Salivary Gland no informative data
Adult Heart
 
 8.475
Adult VirginFemale Spermatheca
 
 20.1
Adult InseminatedFemale Spermatheca
 
 25.4
Adult Ovary
 
 687.8
Adult Testis
 
 5.4
Adult Male Accessory Gland
 
 22.8
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.775
Larval Midgut
 
 21
Larval Hindgut
 
 22.7
Larval Malpighian Tubules no informative data
Larval Fat Body no informative data
Larval Salivary Gland
 
 153.9
Larval Trachea
 
 41.45
Larval Carcass
 
 30.55
Adult Head no informative data
Adult Eye
 
 7.15
Adult Brain
 
 4.6
Adult Thoracic-Abdominal Ganglion
 
 4.5
Adult Crop no informative data
Adult Midgut no informative data
Adult Hindgut
 
 9.2
Adult Malpighian Tubules no informative data
Adult Fat Body no informative data
Adult Salivary Gland no informative data
Adult Heart
 
 8.475
Adult VirginFemale Spermatheca
 
 20.1
Adult InseminatedFemale Spermatheca
 
 25.4
Adult Ovary
 687.8
Adult Testis
 
 5.4
Adult Male Accessory Gland
 
 22.8
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.775
Larval Midgut
 
 21
Larval Hindgut
 
 22.7
Larval Malpighian Tubules no informative data
Larval Fat Body no informative data
Larval Salivary Gland
 
 153.9
Larval Trachea
 
 41.45
Larval Carcass
 
 30.55
Adult Head no informative data
Adult Eye
 
 7.15
Adult Brain
 
 4.6
Adult Thoracic-Abdominal Ganglion
 
 4.5
Adult Crop no informative data
Adult Midgut no informative data
Adult Hindgut
 
 9.2
Adult Malpighian Tubules no informative data
Adult Fat Body no informative data
Adult Salivary Gland no informative data
Adult Heart
 
 8.475
Adult VirginFemale Spermatheca
 
 20.1
Adult InseminatedFemale Spermatheca
 
 25.4
Adult Ovary
 
 687.8
Adult Testis
 
 5.4
Adult Male Accessory Gland
 
 22.8
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.775
Larval Midgut
 
 21
Larval Hindgut
 
 22.7
Larval Malpighian Tubules no informative data
Larval Fat Body no informative data
Larval Salivary Gland
 
 153.9
Larval Trachea
 
 41.45
Larval Carcass
 
 30.55
Adult Head no informative data
Adult Eye
 
 7.15
Adult Brain
 
 4.6
Adult Thoracic-Abdominal Ganglion
 
 4.5
Adult Crop no informative data
Adult Midgut no informative data
Adult Hindgut
 
 9.2
Adult Malpighian Tubules no informative data
Adult Fat Body no informative data
Adult Salivary Gland no informative data
Adult Heart
 
 8.475
Adult VirginFemale Spermatheca
 
 20.1
Adult InseminatedFemale Spermatheca
 
 25.4
Adult Ovary
 
 687.8
Adult Testis
 
 5.4
Adult Male Accessory Gland
 
 22.8
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules no informative data
Larval Fat Body no informative data
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head no informative data
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop no informative data
Adult Midgut no informative data
Adult Hindgut
 
 
Adult Malpighian Tubules no informative data
Adult Fat Body no informative data
Adult Salivary Gland no informative data
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass no informative data

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 no informative data
 
NA 
Eye
 
 7.15
 
NA 
Brain
 
 4.6
 
109.775 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 4.5
 
NA 
Crop
 
 no informative data
 
21 
Midgut
 
 no informative data
 
22.7 
Hindgut
 
 9.2
 
no informative data 
Malpighian Tubules
 
 no informative data
 
no informative data 
Fat Body
 
 no informative data
 
153.9 
Salivary Gland
 
 no informative data
 
NA 
Heart
 
 8.475
 
41.45 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 20.1
 
NA 
InseminatedFemale Spermatheca
 
 25.4
 
NA 
Ovary
 
 687.8
 
NA 
Testis
 
 5.4
 
NA 
Male Accessory Gland
 
 22.8
 
30.55 
Carcass
 
 no informative data

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
follicle cell & nucleus
hide Classical Alleles ( 0 )
For All Classical Alleles Show

Allele of Orc1ClassMutagenStocksKnown lesion
hide Alleles Carried on Transgenic Constructs ( 16 )
For All Alleles Carried on Transgenic Constructs Show

Allele of Orc1ClassMutagenStocksKnown lesion
Orc1GD44772 Yes
Orc11-248.Scer\UAS.T:Avic\GFP0 Yes
Orc1242-556.3xmdb.Scer\UAS.T:Avic\GFP0 Yes
Orc1242-556.Scer\UAS.T:Avic\GFP0 Yes
Orc1C.Scer\UAS.T:Avic\GFP,T:Zzzz\nls10 Yes
Orc1C.Scer\UAS.T:Avic\GFP0 Yes
Orc1hs.PA0 Yes
Orc1K604E.hs0 Yes
Orc1mkb.3xmdb.Scer\UAS.T:Avic\GFP0 Yes
Orc1mob.Scer\UAS.T:Avic\GFP0 Yes
Orc1mob.T:Avic\GFP0 Yes
Orc1MtnA.T:Avic\GFP0 Yes
Orc1N.mkb.Scer\UAS.T:Avic\GFP0 Yes
Orc1N.Scer\UAS.T:Avic\GFP0 Yes
Orc1Scer\UAS.T:Avic\GFP0 Yes
Orc1T:Avic\GFP,T:Hsap\MYC0 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
heat-shock construct
characterization construct
Insertions
Type of insertions
Name
Expression data
hide Gene Ontology: Function, Process & Cellular Component ( 11 unique terms )
hide Terms Based on Experimental Evidence ( 5 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component
CV term
References
hide Terms Based on Predictions or Assertions ( 7 terms )
Molecular Function
CV term
References
inferred from electronic annotation with InterPro:IPR003959
inferred from electronic annotation with InterPro:IPR001025
non-traceable author statement
Biological Process
CV term
References
inferred from sequence or structural similarity with EMBL:AJ003133
non-traceable author statement
Cellular Component
CV term
References
inferred from sequence or structural similarity with EMBL:AJ003133
non-traceable author statement
non-traceable author statement
hide Sequence Ontology: Class of Gene
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hide Summary of Physical Interactions
Protein-protein
Interacting group
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References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
Orc1 allele
Gene
References
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Linkouts
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 2 )
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 51 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
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Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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Source for database identity of
Source for identity of: Orc1 CG10667
Source for database merge of
Additional comments
hide Other Comments
The ATP dependent DNA binding activity of the Orc1/Orc2 protein complex is reduced or inhibited by phosphorylation of Orc1.
Orc1 is degraded by the APC (anaphase-promoting complex).
Orc1 is required for ATP hydrolysis and ATP-dependent DNA binding.
Transcription of Orc1 is coupled to cell cycle progression via direct regulation by E2f. The level of Orc1 protein appears to limit origin utilisation in at least two different cell types.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
Interactive Fly - A cyberspace guide to Drosophila development and metazoan evolution
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 11 )
Reported As
Symbol Synonym
CG10667
 
Name Synonym
origin recognition complex 1
Origin recognition complex subunit 1
 
Secondary FlyBase IDs
hide References ( 59 )
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hide Recent research papers ( 1 )
Neumüller et al., 2011, Cell Stem Cell 8(5): 580--593
Genome-Wide Analysis of Self-Renewal in Drosophila Neural Stem Cells by Transgenic RNAi. [FBrf0213621]
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All reviews listed in FlyBase were published before 2010