dGNaC1
Please see the JBrowse view of Dmel\rpk for information on other features
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AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.
Gene model reviewed during 5.47
3.4 (northern blot)
3.2, 2.3, 1.738 (longest cDNA)
None of the polypeptides share 100% sequence identity.
562 (aa); 65 (kD predicted)
562 (aa)
Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\rpk using the Feature Mapper tool.
Comment: reference states 0-3 hr AEL
Comment: reference states 0-4 hr AEL
rpk transcripts are detected in 0-3 hr embryos and in adult flies.
rpk transcripts are detected in 0-4 hr embryos, and in gonads.
rpk transcript is detected in gonads. In females, expression is detected in stem cells, oogonia, and early cysts. Expression is low at stage S5, but high at stage S10, and is detected in nurse cells, oocytes, and follicle cells. rpk transcript is distributed uniformly in syncytial and cellular blastoderm embryos, declines at early gastrulation, and subsequently disappears. In males, expression is detected in cysts containing primary spermatocytes or cells entering meiosis, and in seminal vesicles.
GBrowse - Visual display of RNA-Seq signals
View Dmel\rpk in GBrowse 23-47.1
3-44.1
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.