FlyBase Gene Report: Dmel\rpk

General Information

Symbol

Dmel\rpk

Species

D. melanogaster

Name

ripped pocket

Annotation Symbol

CG1058

Feature Type

protein_coding_gene

FlyBase ID

FBgn0022981

Gene Model Status

Current

Stock Availability

5 publicly available

Gene Summary

ripped pocket (rpk) encodes a sodium channel in the Degenerin/Epithelial Sodium Channel/Acid Sensing Ion Channel (Deg/ENaC/ASIC) family. Expression of rpk in the larval multidendritic neurons is required for the detection of gentle touch stimuli. [Date last reviewed: 2018-10-04] (FlyBase Gene Snapshot)

All Summaries

Gene Snapshot
Alliance
Auto summary
Gene Group
Interactive Fly

Also Known As

dGNaC1

Key Links

Genomic Location

Cytogenetic map

82C5-82C5

Sequence location

3R:4,645,981..4,648,884 [+]

Recombination map

3-47.1

RefSeq locus

NT_033777 REGION:4645981..4648884

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse GBrowse

Help me choose

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

GO Summary Ribbons

Gene Ontology (GO) Annotations (11 terms)

Molecular Function (2 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

enables ligand-gated sodium channel activity

inferred from biological aspect of ancestor with PANTHER:PTN000189658

(assigned by GO_Central )

(Gaudet et al., 2011)

enables sodium channel activity

inferred from sequence or structural similarity with MGI:MGI:101782

(FlyBase Curators, 2008-)

Biological Process (4 terms)

Terms Based on Experimental Evidence (2 terms)

CV Term

Evidence

References

involved_in detection of mechanical stimulus involved in sensory perception of pain

inferred from expression pattern

(Zelle et al., 2013)

involved_in sensory perception of touch

inferred from mutant phenotype

(Tsubouchi et al., 2012)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

involved_in sodium ion transmembrane transport

inferred from biological aspect of ancestor with PANTHER:PTN000189658

(assigned by GO_Central )

(Gaudet et al., 2011)

involved_in sodium ion transport

inferred from sequence or structural similarity with MGI:MGI:101782

(FlyBase Curators, 2008-)

Cellular Component (5 terms)

Terms Based on Experimental Evidence (3 terms)

CV Term

Evidence

References

located_in axon

inferred from direct assay

(Tsubouchi et al., 2012)

located_in dendrite

inferred from direct assay

(Tsubouchi et al., 2012)

located_in neuronal cell body

inferred from direct assay

(Tsubouchi et al., 2012)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

located_in integral component of membrane

inferred from sequence or structural similarity with MGI:MGI:101782

(FlyBase Curators, 2008-)

is_active_in integral component of plasma membrane

inferred from biological aspect of ancestor with PANTHER:PTN000189658

(assigned by GO_Central )

(Gaudet et al., 2011)

Gene Group (FlyBase)

PICKPOCKET GENES

Protein Family (UniProt)

Protein Signatures (InterPro)

Summaries

Gene Snapshot

Gene Group (FlyBase)

PICKPOCKET GENES -: The degenerin (DEG)/epithial Na⁺ channel (ENaC) gene family, known as the pickpocket genes in Drosophila, encodes subunits of non-voltage gated, amiloride-sensitive cation channels. Channels may be formed by homo- or heteromeric arrangements of subunits. Each subunit has two transmembrane domains and a large cysteine-rich extracellular loop domain. They are functionally diverse, with roles in fluid and salt absorbance, mechanosensation and chemosensation. (Adapted from FBrf0220901 and FBrf0159284).

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\rpk for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure New Section

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry A0A0B4K691)

If you don't see the viewer to the right, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Comments on Gene Model

Gene model reviewed during 5.47

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

rpk-RA

FBtr0078859

NM_079501

2518

562

rpk-RB

FBtr0305313

NM_001259980

2536

568

Additional Transcript Data and Comments

Reported size (kB)

3.4 (northern blot)

(Adams et al., 1998)

3.2, 2.3, 1.738 (longest cDNA)

(Darboux et al., 1998)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

rpk-PA

FBpp0078499

64.8

562

6.21

NP_524225

AAF52108

rpk-PB

FBpp0293856

65.4

568

6.21

NP_001246909

AFH06228

Polypeptides with Identical Sequences

None of the polypeptides share 100% sequence identity.

Additional Polypeptide Data and Comments

Reported size (kDa)

562 (aa); 65 (kD predicted)

(Adams et al., 1998)

562 (aa)

(Darboux et al., 1998)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\rpk using the Feature Mapper tool.

External Data

Crossreferences

Linkouts

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 1 -- 8

(Darboux et al., 1998)

larval stage

wing disc

(Organista et al., 2015)

adult stage | male

seminal vesicle

(Darboux et al., 1998)

spermatogenesis & adult stage

primary spermatocyte cyst

(Darboux et al., 1998)

oogenesis stage S5 -- S14

(Darboux et al., 1998)

oogenesis stage S10

nurse cell

(Darboux et al., 1998)

follicle cell

(Darboux et al., 1998)

oocyte

(Darboux et al., 1998)

northern blot

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage & adult stage

(Adams et al., 1998)

embryonic stage 1 -- 6

Comment: reference states 0-3 hr AEL

(Adams et al., 1998)

embryonic stage 1 -- 9

Comment: reference states 0-4 hr AEL

(Darboux et al., 1998)

adult stage

gonad

(Darboux et al., 1998)

ovary

(Darboux et al., 1998)

Additional Descriptive Data

rpk transcripts are detected in 0-3 hr embryos and in adult flies.

(Adams et al., 1998)

rpk transcripts are detected in 0-4 hr embryos, and in gonads.

(Darboux et al., 1998)

rpk transcript is detected in gonads. In females, expression is detected in stem cells, oogonia, and early cysts. Expression is low at stage S5, but high at stage S10, and is detected in nurse cells, oocytes, and follicle cells. rpk transcript is distributed uniformly in syncytial and cellular blastoderm embryos, declines at early gastrulation, and subsequently disappears. In males, expression is detected in cysts containing primary spermatocytes or cells entering meiosis, and in seminal vesicles.

(Darboux et al., 1998)

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

located_in axon

inferred from direct assay

(Tsubouchi et al., 2012)

located_in dendrite

inferred from direct assay

(Tsubouchi et al., 2012)

located_in neuronal cell body

inferred from direct assay

(Tsubouchi et al., 2012)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\rpk in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\rpk

View exonic expression by tissue for Dmel\rpk

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

40580/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0022981

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0022981

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0022981

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG1058

Flygut - An atlas of the Drosophila adult midgut

FBgn0022981

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 2 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 8 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of rpk

Transgenic constructs containing regulatory region of rpk

Aberrations (Deficiencies and Duplications) ( 1 )

Inferred from experimentation ( 1 )

Gene disrupted in

Df(3R)rpk-Karyβ3

(Tsubouchi et al., 2012)

Inferred from location ( 0 )

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

lethal - all die before end of pupal stage, with Scer\GAL4^pnr-MD237

rpk^GD3621

viable, with Dcr-2^UAS.cDa, Scer\GAL4^e22c, Scer\GAL4^sqh.PW

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

rpk^GD3621

viable, with Scer\GAL4^tin.CΔ4

rpk^GD3621

Other Phenotypes

Allele

abnormal flight, with Scer\GAL4^Mef2.PR

rpk^GD3621

abnormal neuroanatomy | larval stage, with Dcr-2^UAS.cDa, Scer\GAL4^1003.3

rpk^GD3621

abnormal pain response | adult stage, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

rpk^GD3621

abnormal size | adult stage, with Scer\GAL4^nub.PU

rpk^GD3621

abnormal touch response, with Scer\GAL4^109(2)80

rpk^GD3621

abnormal touch response, with Scer\GAL4^1003.3

rpk^GD3621

abnormal touch response | larval stage, with Dcr-2^UAS.cDa, Scer\GAL4^1003.3

rpk^GD3621

abnormal touch response | larval stage, with Karyβ3^{+tCH321-22I15}

rpk^Δ

some die during pupal stage, with Scer\GAL4^pnr-MD237

rpk^GD3621

Phenotype manifest in

Allele

larval dorsal multidendritic neuron ddaA | larval stage, with Dcr-2^UAS.cDa, Scer\GAL4^1003.3

rpk^GD3621

plasma membrane | oogenesis | conditional, with Scer\GAL4^{VP16.mat.αTub67C}

rpk^HMS01973

sensory dendrite | larval stage, with Dcr-2^UAS.cDa, Scer\GAL4^1003.3

rpk^GD3621

unfertilized egg | oogenesis | conditional, with Scer\GAL4^{VP16.mat.αTub67C}

rpk^HMS01973

wing, with Scer\GAL4^nub.PU

rpk^GD3621

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v8.0)

Homo sapiens (Human) (10)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Hsap\ASIC1

6 of 15

Yes

Hsap\ASIC2

6 of 15

Yes

Hsap\ASIC3

6 of 15

Yes

Hsap\ASIC4

6 of 15

Yes

Hsap\ASIC5

6 of 15

Yes

3 of 15

2 of 15

2 of 15

2 of 15

1 of 15

Model Organism Orthologs (via DIOPT v8.0)

Mus musculus (laboratory mouse) (8)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Mmus\Asic5

8 of 15

Yes

7 of 15

6 of 15

6 of 15

5 of 15

3 of 15

3 of 15

2 of 15

Rattus norvegicus (Norway rat) (9)

Rnor\Asic5

6 of 13

Yes

5 of 13

5 of 13

4 of 13

4 of 13

2 of 13

Yes

Rnor\Scnn1a

2 of 13

Rnor\Scnn1b

2 of 13

Rnor\Scnn1g

2 of 13

Xenopus tropicalis (Western clawed frog) (11)

Xtro\asic1

4 of 12

Yes

Xtro\scnn1b

4 of 12

Yes

Xtro\scnn1d

4 of 12

Yes

Xtro\asic4

3 of 12

Xtro\asic5

3 of 12

Yes

Xtro\asic2

2 of 12

Yes

Xtro\LOC101731449

2 of 12

Yes

Xtro\LOC101734161

2 of 12

Yes

Xtro\scnn1a

2 of 12

Xtro\scnn1g

2 of 12

Xtro\LOC100497753

1 of 12

Yes

Danio rerio (Zebrafish) (7)

Drer\asic1b

7 of 15

Yes

Drer\asic2

7 of 15

Yes

6 of 15

6 of 15

6 of 15

4 of 15

2 of 15

Yes

Caenorhabditis elegans (Nematode, roundworm) (30)

Cele\acd-2

7 of 15

Yes

6 of 15

6 of 15

6 of 15

6 of 15

6 of 15

6 of 15

Yes

Cele\mec-10

6 of 15

Yes

Cele\asic-2

5 of 15

Yes

Cele\acd-3

4 of 15

Cele\del-4

4 of 15

Cele\del-10

4 of 15

Yes

Cele\mec-4

4 of 15

Yes

3 of 15

3 of 15

3 of 15

3 of 15

Yes

Cele\unc-8

3 of 15

Cele\degt-1

2 of 15

Cele\del-5

2 of 15

Yes

Cele\del-7

2 of 15

Cele\egas-2

2 of 15

Yes

Cele\egas-3

2 of 15

Yes

Cele\egas-4

2 of 15

Yes

Cele\F58G6.8

2 of 15

Cele\unc-105

2 of 15

Cele\del-6

1 of 15

Yes

Cele\del-8

1 of 15

Cele\egas-1

1 of 15

Cele\Y57G11C.44

1 of 15

Arabidopsis thaliana (thale-cress) (0)

No records found.

Saccharomyces cerevisiae (Brewer's yeast) (0)

No records found.

Schizosaccharomyces pombe (Fission yeast) (0)

No records found.

Other Organism Orthologs (via OrthoDB)

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v8.0)

Drosophila melanogaster (Fruit fly) (31)

Gene Symbol

Score

Source

Alignment

7 of 10

7 of 10

6 of 10

6 of 10

6 of 10

6 of 10

ppk

6 of 10

5 of 10

5 of 10

5 of 10

5 of 10

5 of 10

5 of 10

4 of 10

4 of 10

4 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

3 of 10

1 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

ASIC1; acid sensing ion channel subunit 1

6 of 15

602866

ASIC2; acid sensing ion channel subunit 2

6 of 15

601784

ASIC3; acid sensing ion channel subunit 3

6 of 15

611741

ASIC4; acid sensing ion channel subunit family member 4

6 of 15

606715

ASIC5; acid sensing ion channel subunit family member 5

6 of 15

616693

SCNN1B; sodium channel epithelial 1 subunit beta

3 of 15

600760

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

Summary of Genetic Interactions

esyN Network Diagram

esyN Network Key:

Suppression

Enhancement

View in Interactions Browser

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Smox

suppressible

rpk

(Hevia et al., 2017)

External Data

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0022981

MIST (protein-protein) - An integrated Molecular Interaction Database

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

External Data

Linkouts

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

3-47.1

Cytogenetic map

82C5-82C5

Sequence location

3R:4,645,981..4,648,884 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

82C5-82C5

Limits computationally determined from genome sequence between P{PZ}l(3)02733⁰²⁷³³ and P{EP}EP974

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

82C-82D

(determined by in situ hybridisation)

(Darboux et al., 1998)

Experimentally Determined Recombination Data

Location

3-47.1

(FlyBase, 2016)

3-44.1

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (5)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

25847

y¹ v¹; P{TRiP.JF01868}attP2

82869

y¹ v¹; P{TKO.GS05098}attP40

39053

y¹ sc^* v¹ sev²¹; P{TRiP.HMS01973}attP40

VDRC

v105463

P{KK104901}VIE-260B

v8549

w¹¹¹⁸; P{GD3621}v8549

Genomic Clones (9)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (94)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0022981

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0022981

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

40580

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for database merge of

Additional comments

Other Comments

rpk has been cloned and characterised.

(Adams et al., 1998)

rpk has been cloned and sequenced.

(Darboux et al., 1998)

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 44 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

40580

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

A0A0B4K691

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

A0A0B4K691

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0022981

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

40580/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0022981

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0022981

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0022981

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG1058

Flygut - An atlas of the Drosophila adult midgut

FBgn0022981

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

40580

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG1058

MARRVEL_MODEL - MARRVEL (model organism gene)

40580

modMine - A data warehouse for the modENCODE project

FBgn0022981

Linkouts

DroID - A comprehensive database of gene and protein interactions.

FBgn0022981

DRSC - Results frm RNAi screens

FBgn0022981

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0022981

FlyMine - An integrated database for Drosophila genomics

FBgn0022981

MIST (protein-protein) - An integrated Molecular Interaction Database

Synonyms and Secondary IDs (10)

Reported As

Symbol Synonym

CG1058

(Hevia et al., 2017, Zelle et al., 2013, Tsubouchi et al., 2012, Ni et al., 2010.12.1, Keleman et al., 2009.8.5, Perkins et al., 2009.1.15)

GNaC1

RPK

(Hehlert et al., 2021, Adams et al., 1997)

Rpk

(Emmons-Bell and Hariharan, 2021, Guo et al., 2020, George et al., 2019)

dGNaC1

(Darboux et al., 1998, Darboux et al., 1998, Darboux et al., 1998, Lingueglia, 1998.1.15, Waldmann and Lazdunski, 1998)

ppk2

(Zelle et al., 2013)

rpk

(Gowda et al., 2021, Roy Choudhury et al., 2021, Crava et al., 2020, Schotthöfer and Bohrmann, 2020, Yan et al., 2018, Transgenic RNAi Project members, 2017-, Organista et al., 2015, Guo et al., 2014, Hunter et al., 2014, Sartain and Wolfner, 2013, Zelle et al., 2013, Ben-Shahar, 2012.2.9, Japanese National Institute of Genetics, 2012.5.21, Tsubouchi et al., 2012, Tsubouchi et al., 2012, Ben-Shahar, 2011, Horner and Wolfner, 2008, Chintapalli et al., 2007)

Name Synonyms

gonad-specific amiloride-sensitive sodium channel 1

ripped pocket

(Zelle et al., 2013, Ben-Shahar, 2012.2.9, Tsubouchi et al., 2012, Tsubouchi et al., 2012, Horner and Wolfner, 2008, Anderson et al., 1997)

ripped-pocket

(York-Andersen et al., 2021)

Secondary FlyBase IDs

Datasets (7)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (7)

Result

Result Type

Title

scRNAseq_2020_Cattenoz_NI_seq_clustering

cell clustering analysis

Clustering analysis of hemocytes from non-infested third instar larvae

scRNAseq_2020_Cattenoz_WI_seq_clustering

cell clustering analysis

Clustering analysis of hemocytes from wasp-infested third instar larvae

scRNAseq_2020_Cho_NI72LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from non-infested larvae at 72 h after egg-laying

scRNAseq_2020_Cho_NI96LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from non-infested larvae at 96 h after egg-laying

scRNAseq_2020_Cho_NI120LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from non-infested larvae at 120 h after egg-laying

scRNAseq_2020_Cho_WI96LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from wasp-infested larvae at 96 h after egg-laying

scRNAseq_2020_Cho_NI96HL_seq_clustering

cell clustering analysis

Clustering analysis of circulating hemocytes from non-infested larvae at 96 h after egg-laying

References (62)

The following external sites may use different assemblies or annotations than FlyBase.

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