A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\EfTuM

General Information
SymbolDmel\EfTuMSpeciesD. melanogaster
NameElongation factor Tu mitochondrialAnnotation symbolCG6050
Feature typeprotein_coding_geneFlyBase IDFBgn0024556
Gene Model StatusCurrent Stock availability 8 publicly available
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map50A14-50A14Sequence location2R:9,395,063..9,396,837 [+]

Genomic Maps

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modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene Elongation factor Tu mitochondrial is referred to in FlyBase by the symbol Dmel\EfTuM (CG6050, FBgn0024556). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: translation elongation factor activity. There is experimental evidence that it is involved in the biological process: Golgi organization; mitotic cell cycle; cell proliferation. 8 alleles are reported. The phenotypes of these alleles are annotated with: digestive system; somatic muscle. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Protein synthesis factor, GTP-binding; Small GTP-binding protein domain; Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal; Translation elongation factor EFTu/EF1A, C-terminal; Translation elongation factor EFTu/EF1A, bacterial/organelle; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation/initiation factor/Ribosomal, beta-barrel. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed at stages throughout embryogenesis, during early larval stages, during late pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval hindgut, adult Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, adult hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1623588_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of EfTuM. Gene sequence location is 2R:9395063..9396837.

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Description
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This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
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This section does not currently display links that were removed or gene model changes.
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FB2011_10
Controlled Vocabulary Terms
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
50A14-50A14  
Limits computationally determined from genome sequence between P{lacW}drkk13809&P{EP}mip120EP606 and P{lacW}l(2)03105k16702&P{lacW}fl(2)dk16105  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
89E7-89E9  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\EfTuM for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0301387 FBtr0087668 FBtr0087669 FBtr0087670 FBtr0301389 FBtr0301388 FBpp0290601 FBpp0086788 FBpp0086789 FBpp0086790 FBpp0290603 FBpp0290602 FBti0125155_2 FBti0125155_1 FBti0042687 FBti0026403 FBti0011088 FBti0007640 FBti0105146 FBti0023458 FBti0039937 FBti0104001 FBti0026236 FBti0009939 FBti0033315 FBti0126602
Comments on Gene Model
DGC clone GM14682 appears problematic: not consistent with >45 other ESTs
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0087670
  1719
  489
FBtr0301389
  1757
  489
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0086790  
54.0  
489  
8.15  
FBpp0290603  
54.0  
489  
8.15  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
MitoDrome - A database of annotated Dmel nuclear genes encoding mitochondrial proteins
  • MTDROME06050
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view mip120-RA EfTuM-RA EfTuM-RB mip120-RB
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0024556


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0024556
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed at stages throughout embryogenesis, during early larval stages, during late pupal stages, in adult female stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0024556 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 10127
embryo 02-04hr
 
 4447
embryo 04-06hr
 
 3655
embryo 06-08hr
 
 7558
embryo 08-10hr
 
 9405
embryo 10-12hr
 
 18225
embryo 12-14hr
 
 10643
embryo 14-16hr
 
 17052
embryo 16-18hr
 
 12193
embryo 18-20hr
 
 10428
embryo 20-22hr
 
 10992
embryo 22-24hr
 
 8658
larva L1
 
 21897
larva L2
 
 20418
larva L3 12hr old
 
 14826
larva L3 puffstage 1-2
 
 3231
larva L3 puffstage 3-6
 
 3289
larva L3 puffstage 7-9
 
 3023
white prepupae new
 
 2966
white prepupae 12hr
 
 3487
white prepupae 24hr
 
 4670
pupae 2d postWPP
 
 8646
pupae 3d postWPP
 
 13054
pupae 4d postWPP
 
 11454
adult male 01day
 
 7818
adult male 05day
 
 6778
adult male 30day
 
 7425
adult female 01day
 
 14532
adult female 05day
 
 10201
adult female 30day
 
 10661
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (10127)
embryo 02-04hr
 (4447)
embryo 04-06hr
 (3655)
embryo 06-08hr
 (7558)
embryo 08-10hr
 (9405)
embryo 10-12hr
 (18225)
embryo 12-14hr
 (10643)
embryo 14-16hr
 (17052)
embryo 16-18hr
 (12193)
embryo 18-20hr
 (10428)
embryo 20-22hr
 (10992)
embryo 22-24hr
 (8658)
larva L1
 (21897)
larva L2
 (20418)
larva L3 12hr old
 (14826)
larva L3 puffstage 1-2
 (3231)
larva L3 puffstage 3-6
 (3289)
larva L3 puffstage 7-9
 (3023)
white prepupae new
 (2966)
white prepupae 12hr
 (3487)
white prepupae 24hr
 (4670)
pupae 2d postWPP
 (8646)
pupae 3d postWPP
 (13054)
pupae 4d postWPP
 (11454)
adult male 01day
 (7818)
adult male 05day
 (6778)
adult male 30day
 (7425)
adult female 01day
 (14532)
adult female 05day
 (10201)
adult female 30day
 (10661)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (10127)
embryo 02-04hr
 (4447)
embryo 04-06hr
 (3655)
embryo 06-08hr
 (7558)
embryo 08-10hr
 (9405)
embryo 10-12hr
 (18225)
embryo 12-14hr
 (10643)
embryo 14-16hr
 (17052)
embryo 16-18hr
 (12193)
embryo 18-20hr
 (10428)
embryo 20-22hr
 (10992)
embryo 22-24hr
 (8658)
larva L1
 (21897)
larva L2
 (20418)
larva L3 12hr old
 (14826)
larva L3 puffstage 1-2
 (3231)
larva L3 puffstage 3-6
 (3289)
larva L3 puffstage 7-9
 (3023)
white prepupae new
 (2966)
white prepupae 12hr
 (3487)
white prepupae 24hr
 (4670)
pupae 2d postWPP
 (8646)
pupae 3d postWPP
 (13054)
pupae 4d postWPP
 (11454)
adult male 01day
 (7818)
adult male 05day
 (6778)
adult male 30day
 (7425)
adult female 01day
 (14532)
adult female 05day
 (10201)
adult female 30day
 (10661)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 10127
embryo 02-04hr
 
 4447
embryo 04-06hr
 
 3655
embryo 06-08hr
 
 7558
embryo 08-10hr
 
 9405
embryo 10-12hr
 (18225)
embryo 12-14hr
 10643
embryo 14-16hr
 (17052)
embryo 16-18hr
 (12193)
embryo 18-20hr
 10428
embryo 20-22hr
 (10992)
embryo 22-24hr
 
 8658
larva L1
 (21897)
larva L2
 (20418)
larva L3 12hr old
 (14826)
larva L3 puffstage 1-2
 
 3231
larva L3 puffstage 3-6
 
 3289
larva L3 puffstage 7-9
 
 3023
white prepupae new
 
 2966
white prepupae 12hr
 
 3487
white prepupae 24hr
 
 4670
pupae 2d postWPP
 
 8646
pupae 3d postWPP
 (13054)
pupae 4d postWPP
 (11454)
adult male 01day
 
 7818
adult male 05day
 
 6778
adult male 30day
 
 7425
adult female 01day
 (14532)
adult female 05day
 10201
adult female 30day
 10661
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 10127
embryo 02-04hr
 
 4447
embryo 04-06hr
 
 3655
embryo 06-08hr
 
 7558
embryo 08-10hr
 
 9405
embryo 10-12hr
 
 18225
embryo 12-14hr
 
 10643
embryo 14-16hr
 
 17052
embryo 16-18hr
 
 12193
embryo 18-20hr
 
 10428
embryo 20-22hr
 
 10992
embryo 22-24hr
 
 8658
larva L1
 
 21897
larva L2
 
 20418
larva L3 12hr old
 
 14826
larva L3 puffstage 1-2
 
 3231
larva L3 puffstage 3-6
 
 3289
larva L3 puffstage 7-9
 
 3023
white prepupae new
 
 2966
white prepupae 12hr
 
 3487
white prepupae 24hr
 
 4670
pupae 2d postWPP
 
 8646
pupae 3d postWPP
 
 13054
pupae 4d postWPP
 
 11454
adult male 01day
 
 7818
adult male 05day
 
 6778
adult male 30day
 
 7425
adult female 01day
 
 14532
adult female 05day
 
 10201
adult female 30day
 
 10661
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0024556 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 10127
embryo 02-04hr
 
 4447
embryo 04-06hr
 
 3655
embryo 06-08hr
 
 7558
embryo 08-10hr
 
 9405
embryo 10-12hr
 
 18225
embryo 12-14hr
 
 10643
embryo 14-16hr
 
 17052
embryo 16-18hr
 
 12193
embryo 18-20hr
 
 10428
embryo 20-22hr
 
 10992
embryo 22-24hr
 
 8658
larva L1
 
 21897
larva L2
 
 20418
larva L3 12hr old
 
 14826
larva L3 puffstage 1-2
 
 3231
larva L3 puffstage 3-6
 
 3289
larva L3 puffstage 7-9
 
 3023
white prepupae new
 
 2966
white prepupae 12hr
 
 3487
white prepupae 24hr
 
 4670
pupae 2d postWPP
 
 8646
pupae 3d postWPP
 
 13054
pupae 4d postWPP
 
 11454
adult male 01day
 
 7818
adult male 05day
 
 6778
adult male 30day
 
 7425
adult female 01day
 
 14532
adult female 05day
 
 10201
adult female 30day
 
 10661
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (10127)
embryo 02-04hr
 (4447)
embryo 04-06hr
 (3655)
embryo 06-08hr
 (7558)
embryo 08-10hr
 (9405)
embryo 10-12hr
 (18225)
embryo 12-14hr
 (10643)
embryo 14-16hr
 (17052)
embryo 16-18hr
 (12193)
embryo 18-20hr
 (10428)
embryo 20-22hr
 (10992)
embryo 22-24hr
 (8658)
larva L1
 (21897)
larva L2
 (20418)
larva L3 12hr old
 (14826)
larva L3 puffstage 1-2
 (3231)
larva L3 puffstage 3-6
 (3289)
larva L3 puffstage 7-9
 (3023)
white prepupae new
 (2966)
white prepupae 12hr
 (3487)
white prepupae 24hr
 (4670)
pupae 2d postWPP
 (8646)
pupae 3d postWPP
 (13054)
pupae 4d postWPP
 (11454)
adult male 01day
 (7818)
adult male 05day
 (6778)
adult male 30day
 (7425)
adult female 01day
 (14532)
adult female 05day
 (10201)
adult female 30day
 (10661)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (10127)
embryo 02-04hr
 (4447)
embryo 04-06hr
 (3655)
embryo 06-08hr
 (7558)
embryo 08-10hr
 (9405)
embryo 10-12hr
 (18225)
embryo 12-14hr
 (10643)
embryo 14-16hr
 (17052)
embryo 16-18hr
 (12193)
embryo 18-20hr
 (10428)
embryo 20-22hr
 (10992)
embryo 22-24hr
 (8658)
larva L1
 (21897)
larva L2
 (20418)
larva L3 12hr old
 (14826)
larva L3 puffstage 1-2
 (3231)
larva L3 puffstage 3-6
 (3289)
larva L3 puffstage 7-9
 (3023)
white prepupae new
 (2966)
white prepupae 12hr
 (3487)
white prepupae 24hr
 (4670)
pupae 2d postWPP
 (8646)
pupae 3d postWPP
 (13054)
pupae 4d postWPP
 (11454)
adult male 01day
 (7818)
adult male 05day
 (6778)
adult male 30day
 (7425)
adult female 01day
 (14532)
adult female 05day
 (10201)
adult female 30day
 (10661)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 10127
embryo 02-04hr
 
 4447
embryo 04-06hr
 
 3655
embryo 06-08hr
 
 7558
embryo 08-10hr
 
 9405
embryo 10-12hr
 18225
embryo 12-14hr
 10643
embryo 14-16hr
 17052
embryo 16-18hr
 12193
embryo 18-20hr
 10428
embryo 20-22hr
 10992
embryo 22-24hr
 
 8658
larva L1
 (21897)
larva L2
 20418
larva L3 12hr old
 14826
larva L3 puffstage 1-2
 
 3231
larva L3 puffstage 3-6
 
 3289
larva L3 puffstage 7-9
 
 3023
white prepupae new
 
 2966
white prepupae 12hr
 
 3487
white prepupae 24hr
 
 4670
pupae 2d postWPP
 
 8646
pupae 3d postWPP
 13054
pupae 4d postWPP
 11454
adult male 01day
 
 7818
adult male 05day
 
 6778
adult male 30day
 
 7425
adult female 01day
 14532
adult female 05day
 10201
adult female 30day
 10661
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 10127
embryo 02-04hr
 
 4447
embryo 04-06hr
 
 3655
embryo 06-08hr
 
 7558
embryo 08-10hr
 
 9405
embryo 10-12hr
 
 18225
embryo 12-14hr
 
 10643
embryo 14-16hr
 
 17052
embryo 16-18hr
 
 12193
embryo 18-20hr
 
 10428
embryo 20-22hr
 
 10992
embryo 22-24hr
 
 8658
larva L1
 
 21897
larva L2
 
 20418
larva L3 12hr old
 
 14826
larva L3 puffstage 1-2
 
 3231
larva L3 puffstage 3-6
 
 3289
larva L3 puffstage 7-9
 
 3023
white prepupae new
 
 2966
white prepupae 12hr
 
 3487
white prepupae 24hr
 
 4670
pupae 2d postWPP
 
 8646
pupae 3d postWPP
 
 13054
pupae 4d postWPP
 
 11454
adult male 01day
 
 7818
adult male 05day
 
 6778
adult male 30day
 
 7425
adult female 01day
 
 14532
adult female 05day
 
 10201
adult female 30day
 
 10661
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0024556


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0024556
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval hindgut, adult Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, adult hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0024556 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 413.25
Larval Midgut
 
 236.8
Larval Hindgut
 
 558.4
Larval Malpighian Tubules
 
 146.6
Larval Fat Body
 
 103.5
Larval Salivary Gland
 
 378.2
Larval Trachea
 
 400.125
Larval Carcass
 
 359.1
Adult Head
 
 262.3
Adult Eye
 
 216.65
Adult Brain
 
 337.1
Adult Thoracic-Abdominal Ganglion
 
 385.1
Adult Crop
 
 306.5
Adult Midgut
 
 272.5
Adult Hindgut
 
 475.6
Adult Malpighian Tubules
 
 816
Adult Fat Body
 
 353.3
Adult Salivary Gland
 
 345.9
Adult Heart
 
 414.775
Adult VirginFemale Spermatheca
 
 374.7
Adult InseminatedFemale Spermatheca
 
 407.5
Adult Ovary
 
 411.3
Adult Testis
 
 106.1
Adult Male Accessory Gland
 
 330.9
Adult Carcass
 
 443.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 413.25
Larval Midgut
 
 236.8
Larval Hindgut
 (558.4)
Larval Malpighian Tubules
 
 146.6
Larval Fat Body
 
 103.5
Larval Salivary Gland
 
 378.2
Larval Trachea
 
 400.125
Larval Carcass
 
 359.1
Adult Head
 
 262.3
Adult Eye
 
 216.65
Adult Brain
 
 337.1
Adult Thoracic-Abdominal Ganglion
 
 385.1
Adult Crop
 
 306.5
Adult Midgut
 
 272.5
Adult Hindgut
 
 475.6
Adult Malpighian Tubules
 (816)
Adult Fat Body
 
 353.3
Adult Salivary Gland
 
 345.9
Adult Heart
 
 414.775
Adult VirginFemale Spermatheca
 
 374.7
Adult InseminatedFemale Spermatheca
 
 407.5
Adult Ovary
 
 411.3
Adult Testis
 
 106.1
Adult Male Accessory Gland
 
 330.9
Adult Carcass
 
 443.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 413.25
Larval Midgut
 
 236.8
Larval Hindgut
 
 558.4
Larval Malpighian Tubules
 
 146.6
Larval Fat Body
 
 103.5
Larval Salivary Gland
 
 378.2
Larval Trachea
 
 400.125
Larval Carcass
 
 359.1
Adult Head
 
 262.3
Adult Eye
 
 216.65
Adult Brain
 
 337.1
Adult Thoracic-Abdominal Ganglion
 
 385.1
Adult Crop
 
 306.5
Adult Midgut
 
 272.5
Adult Hindgut
 
 475.6
Adult Malpighian Tubules
 
 816
Adult Fat Body
 
 353.3
Adult Salivary Gland
 
 345.9
Adult Heart
 
 414.775
Adult VirginFemale Spermatheca
 
 374.7
Adult InseminatedFemale Spermatheca
 
 407.5
Adult Ovary
 
 411.3
Adult Testis
 
 106.1
Adult Male Accessory Gland
 
 330.9
Adult Carcass
 
 443.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 413.25
Larval Midgut
 
 236.8
Larval Hindgut
 
 558.4
Larval Malpighian Tubules
 
 146.6
Larval Fat Body
 
 103.5
Larval Salivary Gland
 
 378.2
Larval Trachea
 
 400.125
Larval Carcass
 
 359.1
Adult Head
 
 262.3
Adult Eye
 
 216.65
Adult Brain
 
 337.1
Adult Thoracic-Abdominal Ganglion
 
 385.1
Adult Crop
 
 306.5
Adult Midgut
 
 272.5
Adult Hindgut
 
 475.6
Adult Malpighian Tubules
 
 816
Adult Fat Body
 
 353.3
Adult Salivary Gland
 
 345.9
Adult Heart
 
 414.775
Adult VirginFemale Spermatheca
 
 374.7
Adult InseminatedFemale Spermatheca
 
 407.5
Adult Ovary
 
 411.3
Adult Testis
 
 106.1
Adult Male Accessory Gland
 
 330.9
Adult Carcass
 
 443.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0024556 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 413.25
Larval Midgut
 
 236.8
Larval Hindgut
 
 558.4
Larval Malpighian Tubules
 
 146.6
Larval Fat Body
 
 103.5
Larval Salivary Gland
 
 378.2
Larval Trachea
 
 400.125
Larval Carcass
 
 359.1
Adult Head
 
 262.3
Adult Eye
 
 216.65
Adult Brain
 
 337.1
Adult Thoracic-Abdominal Ganglion
 
 385.1
Adult Crop
 
 306.5
Adult Midgut
 
 272.5
Adult Hindgut
 
 475.6
Adult Malpighian Tubules
 
 816
Adult Fat Body
 
 353.3
Adult Salivary Gland
 
 345.9
Adult Heart
 
 414.775
Adult VirginFemale Spermatheca
 
 374.7
Adult InseminatedFemale Spermatheca
 
 407.5
Adult Ovary
 
 411.3
Adult Testis
 
 106.1
Adult Male Accessory Gland
 
 330.9
Adult Carcass
 
 443.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 413.25
Larval Midgut
 
 236.8
Larval Hindgut
 558.4
Larval Malpighian Tubules
 
 146.6
Larval Fat Body
 
 103.5
Larval Salivary Gland
 
 378.2
Larval Trachea
 
 400.125
Larval Carcass
 
 359.1
Adult Head
 
 262.3
Adult Eye
 
 216.65
Adult Brain
 
 337.1
Adult Thoracic-Abdominal Ganglion
 
 385.1
Adult Crop
 
 306.5
Adult Midgut
 
 272.5
Adult Hindgut
 
 475.6
Adult Malpighian Tubules
 (816)
Adult Fat Body
 
 353.3
Adult Salivary Gland
 
 345.9
Adult Heart
 
 414.775
Adult VirginFemale Spermatheca
 
 374.7
Adult InseminatedFemale Spermatheca
 
 407.5
Adult Ovary
 
 411.3
Adult Testis
 
 106.1
Adult Male Accessory Gland
 
 330.9
Adult Carcass
 
 443.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 413.25
Larval Midgut
 
 236.8
Larval Hindgut
 
 558.4
Larval Malpighian Tubules
 
 146.6
Larval Fat Body
 
 103.5
Larval Salivary Gland
 
 378.2
Larval Trachea
 
 400.125
Larval Carcass
 
 359.1
Adult Head
 
 262.3
Adult Eye
 
 216.65
Adult Brain
 
 337.1
Adult Thoracic-Abdominal Ganglion
 
 385.1
Adult Crop
 
 306.5
Adult Midgut
 
 272.5
Adult Hindgut
 
 475.6
Adult Malpighian Tubules
 
 816
Adult Fat Body
 
 353.3
Adult Salivary Gland
 
 345.9
Adult Heart
 
 414.775
Adult VirginFemale Spermatheca
 
 374.7
Adult InseminatedFemale Spermatheca
 
 407.5
Adult Ovary
 
 411.3
Adult Testis
 
 106.1
Adult Male Accessory Gland
 
 330.9
Adult Carcass
 
 443.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 413.25
Larval Midgut
 
 236.8
Larval Hindgut
 
 558.4
Larval Malpighian Tubules
 
 146.6
Larval Fat Body
 
 103.5
Larval Salivary Gland
 
 378.2
Larval Trachea
 
 400.125
Larval Carcass
 
 359.1
Adult Head
 
 262.3
Adult Eye
 
 216.65
Adult Brain
 
 337.1
Adult Thoracic-Abdominal Ganglion
 
 385.1
Adult Crop
 
 306.5
Adult Midgut
 
 272.5
Adult Hindgut
 
 475.6
Adult Malpighian Tubules
 
 816
Adult Fat Body
 
 353.3
Adult Salivary Gland
 
 345.9
Adult Heart
 
 414.775
Adult VirginFemale Spermatheca
 
 374.7
Adult InseminatedFemale Spermatheca
 
 407.5
Adult Ovary
 
 411.3
Adult Testis
 
 106.1
Adult Male Accessory Gland
 
 330.9
Adult Carcass
 
 443.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 262.3
 
NA 
Eye
 
 216.65
 
NA 
Brain
 
 337.1
 
413.25 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 385.1
 
NA 
Crop
 
 306.5
 
236.8 
Midgut
 
 272.5
 
558.4 
Hindgut
 
 475.6
 
146.6 
Malpighian Tubules
 
 816
 
103.5 
Fat Body
 
 353.3
 
378.2 
Salivary Gland
 
 345.9
 
NA 
Heart
 
 414.775
 
400.125 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 374.7
 
NA 
InseminatedFemale Spermatheca
 
 407.5
 
NA 
Ovary
 
 411.3
 
NA 
Testis
 
 106.1
 
NA 
Male Accessory Gland
 
 330.9
 
359.1 
Carcass
 
 443.3

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 3 )
For All Classical Alleles Show

Allele of EfTuMClassMutagenStocksKnown lesion
EfTuMEY083082 Yes
EfTuML45692 Yes
EfTuM340 Yes
hide Alleles Carried on Transgenic Constructs ( 5 )
For All Alleles Carried on Transgenic Constructs Show

Allele of EfTuMClassMutagenStocksKnown lesion
EfTuMGD169612 Yes
EfTuMHMS006551 Yes
EfTuMKK1073051 Yes
EfTuM+tBa0 Yes
EfTuMGD65810 Yes
hide Aneuploid Aberrations
Not disrupted in
Partially disrupted in
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
characterization construct
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap
insertion of mobile activating element
hide Gene Ontology: Function, Process & Cellular Component ( 8 unique terms )
hide Terms Based on Experimental Evidence ( 3 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component ( 0 terms)
hide Terms Based on Predictions or Assertions ( 5 terms )
Molecular Function
CV term
References
inferred from electronic annotation with InterPro:IPR000795
inferred from sequence or structural similarity
inferred from sequence or structural similarity with Saccharomyces TUF1
inferred from sequence or structural similarity with UniProtKB:P49411
Biological Process
CV term
References
inferred from sequence or structural similarity with Saccharomyces TUF1
inferred from sequence or structural similarity with UniProtKB:P49411
Cellular Component
CV term
References
inferred from sequence or structural similarity
inferred from sequence or structural similarity with Saccharomyces TUF1
inferred from sequence or structural similarity with UniProtKB:P49411
hide Sequence Ontology: Class of Gene
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hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
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Interacts with
Please look at the allele data for full details of the genetic interactions
EfTuM allele
Gene
References
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Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 8 )
Bloomington
Kyoto
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 155 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: EfTuM CG6050
Additional comments
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hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
MitoDrome - A database of annotated Dmel nuclear genes encoding mitochondrial proteins
  • MTDROME06050
Linkouts
BioGRID - A database of protein and genetic interactions
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 7 )
Reported As
Symbol Synonym
Name Synonym
Elongation factor Tu mitochondrial
Secondary FlyBase IDs
  • FBgn0033847
hide References ( 31 )
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hide Recent research papers ( 2 )
Kondylis et al., 2011, PLoS ONE 6(2): e17173
Identification of ER Proteins Involved in the Functional Organisation of the Early Secretory Pathway in Drosophila Cells by a Targeted RNAi Screen. [FBrf0213167]
Barnes et al., 2010, BMC Biochem. 11: 26
Loss of the SIN3 transcriptional corepressor results in aberrant mitochondrial function. [FBrf0211360]
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All reviews listed in FlyBase were published before 2010