FB2020_06, released Dec 22, 2020

Gene: Dmel\rush

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General Information
Symbol
Dmel\rush
Species
D. melanogaster
Name
rush hour
Annotation Symbol
CG14782
Feature Type
protein_coding_gene
FlyBase ID
FBgn0025381
Gene Model Status
Current
Stock Availability
8 publicly available
Gene Snapshot
rush hour (rush) encodes an endosome-associated protein that directly binds phosphatidylinositol 3-phosphate (PI3P) and the Rab GDP dissociation inhibitor encoded by Gdi. rush product regulates endosomal trafficking by modulating the activity of Rab proteins. [Date last reviewed: 2018-09-20]
Other Summaries
Also Known As

EG:80H7.5

Key Links
Genomic Location
Cytogenetic map
2B1-2B1
Sequence location
X:1,478,552..1,481,420 [+]
Recombination map

1-0.2

RefSeq locus
NC_004354 REGION:1478552..1481420
Sequence
Get Decorated FASTA
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
NCBI
UCSC
Ensembl
PopFly
Function
GO Summary Ribbons
Gene Ontology (GO) Annotations (7 terms)
Molecular Function (2 terms)
Terms Based on Experimental Evidence (1 term)
CV Term
Evidence
References
enables phosphatidylinositol binding
inferred from direct assay
(Gailite et al., 2012)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
enables metal ion binding
inferred from electronic annotation with InterPro:IPR000306
(assigned by InterPro )
(FlyBase Curators et al., 2004-)
enables phosphatidylinositol binding
inferred from biological aspect of ancestor with PANTHER:PTN001107322
(assigned by GO_Central )
(Gaudet et al., 2011)
Biological Process (3 terms)
Terms Based on Experimental Evidence (3 terms)
CV Term
Evidence
References
involved_in endocytosis
inferred from genetic interaction with FLYBASE:car; FB:FBgn0000257
(Gailite et al., 2012)
inferred from genetic interaction with FLYBASE:Rab5; FB:FBgn0014010
(Gailite et al., 2012)
inferred from genetic interaction with FLYBASE:VhaSFD; FB:FBgn0027779
(Gailite et al., 2012)
inferred from genetic interaction with FLYBASE:Hrs; FB:FBgn0031450
(Gailite et al., 2012)
involved_in endosome organization
inferred from mutant phenotype
(Gailite et al., 2012)
involved_in endosome to lysosome transport
inferred from mutant phenotype
(Gailite et al., 2012)
Terms Based on Predictions or Assertions (0 terms)
Cellular Component (2 terms)
Terms Based on Experimental Evidence (2 terms)
CV Term
Evidence
References
located_in early endosome
inferred from direct assay
(Gailite et al., 2012)
located_in late endosome
inferred from direct assay
(Gailite et al., 2012)
Terms Based on Predictions or Assertions (1 term)
CV Term
Evidence
References
located_in early endosome
inferred from biological aspect of ancestor with PANTHER:PTN000519483
(assigned by GO_Central )
(Gaudet et al., 2011)
Gene Group (FlyBase)
Protein Family (UniProt)
-
Protein Signatures (InterPro)
Summaries
Protein Function (UniProtKB)
Functions in the regulation of endosome morphology and late endosome formation. Has a role in controlling trafficking from early to late endosomes and from late endosomes to lysosomes. Important for localization of Gdi to the endosomal membranes. May function in controlling the activity of multiple regulators in the endocytic pathway, perhaps by positively controlling those involved in the early steps of endocytosis such as Rab5 and hrs, and negative regulating those involved in the late stages of endocytosis like car and VhaSFD.
(UniProt, O76902)
Gene Model and Products
Number of Transcripts
2
Number of Unique Polypeptides
1

Please see the JBrowse view of Dmel\rush for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Comments on Gene Model

Gene model reviewed during 5.49

Shares 3' UTR with upstream gene.

Sequence Ontology: Class of Gene
nuclear_gene
protein_coding_gene
Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
rush-RA
FBtr0070259
NM_130567
2082
316
rush-RB
FBtr0339589
NM_001297855
2672
316
Additional Transcript Data and Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank
rush-PA
FBpp0070249
34.2
316
7.85
NP_569923
AAF45637
rush-PB
FBpp0308661
34.2
316
7.85
NP_001284784
AHN59255
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

316 aa isoforms: rush-PA, rush-PB
Additional Polypeptide Data and Comments
Reported size (kDa)
Comments
External Data
Subunit Structure (UniProtKB)

Interacts with Gdi (Rab GDP dissociation inhibitor).

(UniProt, O76902)
Domain

The FYVE-type zinc finger domain is necessary and sufficient for endosome targeting and localization to the plasma membrane.

(UniProt, O76902)
Crossreferences
InterPro - A database of protein families, domains and functional sites
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\rush using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Expression Data
Expression Summary Ribbons
Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.
For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.
Transcript Expression
expression microarray
Stage
Tissue/Position (including subcellular localization)
Reference
adult stage
adult fat body

Comment: cyclical, peak ZT13-16

(Xu et al., 2011)
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
embryonic stage 1 -- 3
organism

Comment: maternally deposited

(Fisher et al., 2012)
embryonic stage 4 -- 6
organism
(Fisher et al., 2012)
embryonic stage 7 -- 8
organism | faint | ubiquitous
(Fisher et al., 2012)
organism | ubiquitous
(Fisher et al., 2012)
embryonic stage 9 -- 10
organism | faint | ubiquitous
(Fisher et al., 2012)
organism | ubiquitous
(Fisher et al., 2012)
embryonic stage 11 -- 12
organism | faint | ubiquitous
(Fisher et al., 2012)
organism | ubiquitous
(Fisher et al., 2012)
embryonic stage 13 -- 16
organism | faint | ubiquitous
(Fisher et al., 2012)
organism | ubiquitous
(Fisher et al., 2012)
Additional Descriptive Data

Expressed cyclically in the adult fat body.

(Xu et al., 2011)
Marker for
 
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
day 5 of adulthood & male -- day 7 of adulthood & male
spermatozoon
(Wasbrough et al., 2010)
adult stage
adult head
(Aradska et al., 2015)
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Evidence
References
located_in early endosome
inferred from direct assay
(Gailite et al., 2012)
located_in late endosome
inferred from direct assay
(Gailite et al., 2012)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\rush in GBrowse 2
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Bulk Downloads
RNA-Seq RPKM values for all genes
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyBase Wiki
Image Based Resources
Alleles, Insertions, and Transgenic Constructs
Classical and Insertion Alleles ( 5 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 14 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of rush
Transgenic constructs containing regulatory region of rush
Deletions and Duplications ( 1 )
Partially disrupted in
Df(1)rush4
(Gailite et al., 2012)
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Lethality
Allele
viable
viable, with Dcr-2UAS.cDa, Scer\GAL4elav.PLu
viable, with Scer\GAL4Mef2.PR
viable, with Scer\GAL4pnr-MD237
viable, with Scer\GAL4tin.CΔ4
Sterility
Allele
fertile
Other Phenotypes
Allele
sleep defective
Phenotype manifest in
Allele
late endosome
Orthologs
Downloads
Download All DIOPT Orthologs
Download All OrthoDB Orthologs
Human Orthologs (via DIOPT v8.0)
Homo sapiens (Human) (9)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Hsap\PLEKHF2
15 of 15
Yes
Yes
Hsap\PLEKHF1
7 of 15
No
Yes
Hsap\FYCO1
2 of 15
No
Yes
1  
Hsap\FGD5
1 of 15
No
Yes
Hsap\FGD6
1 of 15
No
No
Hsap\RUFY1
1 of 15
No
No
Hsap\ZFYVE9
1 of 15
No
No
Hsap\ZFYVE16
1 of 15
No
No
Hsap\ZFYVE26
1 of 15
No
No
Model Organism Orthologs (via DIOPT v8.0)
Mus musculus (laboratory mouse) (10)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Mmus\Plekhf2
13 of 15
Yes
Yes
Mmus\Plekhf1
7 of 15
No
Yes
Mmus\Fyco1
2 of 15
No
Yes
Mmus\Fgd5
1 of 15
No
Yes
Mmus\Fgd6
1 of 15
No
Yes
Mmus\Rufy1
1 of 15
No
No
Mmus\Rufy4
1 of 15
No
Yes
Mmus\Zfyve9
1 of 15
No
No
Mmus\Zfyve16
1 of 15
No
No
Mmus\Zfyve26
1 of 15
No
No
Rattus norvegicus (Norway rat) (6)
Rnor\Plekhf2
13 of 13
Yes
Yes
Rnor\Plekhf1
7 of 13
No
Yes
Rnor\Fgd5
1 of 13
No
Yes
Rnor\Fyco1
1 of 13
No
Yes
Rnor\Rufy1
1 of 13
No
No
Rnor\Zfyve26
1 of 13
No
No
Xenopus tropicalis (Western clawed frog) (5)
Xtro\plekhf2
13 of 12
Yes
Yes
Xtro\plekhf1
7 of 12
No
Yes
Xtro\fgd5
1 of 12
No
Yes
Xtro\fgd6
1 of 12
No
Yes
Xtro\zfyve26
1 of 12
No
No
Danio rerio (Zebrafish) (8)
Drer\plekhf2
14 of 15
Yes
Yes
Drer\plekhf1
6 of 15
No
Yes
Drer\fgd5b
1 of 15
No
Yes
Drer\fgd6
1 of 15
No
Yes
Drer\fyco1a
1 of 15
No
Yes
Drer\zfyve9a
1 of 15
No
No
Drer\zfyve16
1 of 15
No
No
Drer\zfyve26
1 of 15
No
No
Caenorhabditis elegans (Nematode, roundworm) (5)
Cele\ZK632.12
14 of 15
Yes
Yes
Cele\tag-77
2 of 15
No
Yes
Cele\aka-1
1 of 15
No
No
Cele\K11H3.4
1 of 15
No
Yes
Cele\rabs-5
1 of 15
No
No
Arabidopsis thaliana (thale-cress) (4)
Atha\AT1G20110
1 of 9
Yes
Yes
Atha\AT1G29800
1 of 9
Yes
Yes
Atha\AT3G43230
1 of 9
Yes
Yes
Atha\FAB1B
1 of 9
Yes
No
Saccharomyces cerevisiae (Brewer's yeast) (2)
Scer\PIB1
7 of 15
Yes
Yes
Scer\PIB2
1 of 15
No
No
Schizosaccharomyces pombe (Fission yeast) (2)
Spom\SPBC36B7.05c
2 of 12
Yes
Yes
Spom\pep7
1 of 12
No
No
Ortholog(s) in Drosophila Species (via OrthoDB v9.1) ( EOG09190CFT )
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila suzukii
Spotted wing Drosophila
Dsuz\DS10_00005131
Drosophila simulans
Dsim\GD27539
Drosophila sechellia
Dsec\GM19146
Drosophila erecta
Dere\GG12863
Drosophila yakuba
Dyak\GE16694
Drosophila ananassae
Dana\GF20914
Drosophila pseudoobscura pseudoobscura
Dpse\GA13242
Drosophila persimilis
Dper\GL14261
Drosophila willistoni
Dwil\GK16096
Drosophila virilis
Dvir\GJ16034
Drosophila mojavensis
Dmoj\GI26836
Drosophila grimshawi
Dgri\GH17951
Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG09150CXG )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Musca domestica
House fly
Mdoa\17021703
Glossina morsitans
Tsetse fly
Gmor\GMOY000523
Lucilia cuprina
Australian sheep blowfly
Lcup\FF38_04888
Mayetiola destructor
Hessian fly
Mdes\Mdes005451
Aedes aegypti
Yellow fever mosquito
Aaeg\AAEL015302
Aedes aegypti
Yellow fever mosquito
Aaeg\AAEL014564
Anopheles gambiae
Malaria mosquito
Agam\AGAP010307
Culex quinquefasciatus
Southern house mosquito
Cqui\CPIJ015287
Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W0FI9 )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Bombyx mori
Silkmoth
Bmor\BGIBMGA004029
Danaus plexippus
Monarch butterfly
Dple\DPOGS211776-PA
Heliconius melpomene
Postman butterfly
Hmel\HMEL006435
Apis florea
Little honeybee
Aflo\2287096644
Apis mellifera
Western honey bee
Amel\GB51533
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP25590
Bombus terrestris
Buff-tailed bumblebee
Bter\15207784
Linepithema humile
Argentine ant
Lhum\LH20535
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:002f3e
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG004247
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_02337
Tribolium castaneum
Red flour beetle
Tcas\TC034798
Pediculus humanus
Human body louse
Phum\PHUM036310
Rhodnius prolixus
Kissing bug
Rpro\RPRC009392
Cimex lectularius
Bed bug
Clec\CLEC001088
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI009357
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_02159
Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X0FI9 )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strigamia maritima
European centipede
Smar\SMAR013909
Ixodes scapularis
Black-legged tick
Isca\ISCW020649
Stegodyphus mimosarum
African social velvet spider
Smim\KFM64093.1
Tetranychus urticae
Two-spotted spider mite
Turt\tetur06g05850
Tetranychus urticae
Two-spotted spider mite
Turt\tetur11g04250
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_306755
Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G0OVV )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Plekhf2
Strongylocentrotus purpuratus
Purple sea urchin
Spur\SPU_011262gn
Ciona intestinalis
Vase tunicate
Cint\ENSCING00000003542
Gallus gallus
Domestic chicken
Ggal\PLEKHF2
Gallus gallus
Domestic chicken
Ggal\PLEKHF1
Paralogs
Downloads
Download All DIOPT Paralogs
Paralogs (via DIOPT v8.0)
Drosophila melanogaster (Fruit fly) (4)
Gene Symbol
Score
Source
Compara
eggNOG
Homologene
Inparanoid
Isobase
OrthoDB
OrthoFinder
orthoMCL
Panther
RoundUp
Alignment
CG5270
1 of 10
CG6051
1 of 10
CG31064
1 of 10
Sara
1 of 10
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Model Summary Ribbon
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 0 )
    Human Ortholog
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Interaction
    References
    Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    PLEKHF2; pleckstrin homology and FYVE domain containing 2
    15 of 15
    615208
        PLEKHF1; pleckstrin homology and FYVE domain containing 1
        7 of 15
        615200
            Functional Complementation Data
            Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
            Interactions
            Summary of Physical Interactions
            Summary of Genetic Interactions
            esyN Network Diagram
            esyN Network Key:
            Suppression
            Enhancement
            View in Interactions Browser
            Please look at the allele data for full details of the genetic interactions
            Starting gene(s)
            Interaction type
            Interacting gene(s)
            Reference
            car|rush
            suppressible
            sta
            (Gailite et al., 2012)
            Gdi|rush
            suppressible
            sta
            (Gailite et al., 2012)
            VhaSFD|rush
            suppressible
            sta
            (Gailite et al., 2012)
            Starting gene(s)
            Interaction type
            Interacting gene(s)
            Reference
            Hrs
            suppressible
            rush
            (Gailite et al., 2012)
            Hrs|sta
            suppressible
            rush
            (Gailite et al., 2012)
            Rab5|sta
            suppressible
            rush
            (Gailite et al., 2012)
            External Data
            Subunit Structure (UniProtKB)
            Interacts with Gdi (Rab GDP dissociation inhibitor).
            (UniProt, O76902 )
            Linkouts
            BioGRID - A database of protein and genetic interactions.
            DroID - A comprehensive database of gene and protein interactions.
            InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.
            MIST (protein-protein) - An integrated Molecular Interaction Database
            Pathways
            Signaling Pathways (FlyBase)
            Metabolic Pathways
            External Data
            Linkouts
            Genomic Location and Detailed Mapping Data
            Chromosome (arm)
            X
            Recombination map

            1-0.2

            Cytogenetic map
            2B1-2B1
            Sequence location
            X:1,478,552..1,481,420 [+]
            FlyBase Computed Cytological Location
            Cytogenetic map
            Evidence for location
            2B1-2B1
            Limits computationally determined from genome sequence between P{EP}futschEP1419 and P{EP}brEP1515
            Experimentally Determined Cytological Location
            Cytogenetic map
            Notes
            References
            Experimentally Determined Recombination Data
            Location

            1-0.2

            (FlyBase, 2016)

            1-0.1

            (Comeron et al., 2012)
            Left of (cM)
            Right of (cM)
            Notes
            Stocks and Reagents
            Stocks (8)
            Genomic Clones (9)
             

            Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

            cDNA Clones (95)
             

            Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

            cDNA clones, fully sequenced
            BDGP DGC clones
            Other clones
            Drosophila Genomics Resource Center cDNA clones

            For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

            cDNA Clones, End Sequenced (ESTs)
            BDGP DGC clones
            Other clones
            RNAi and Array Information
            Linkouts
            DRSC - Results frm RNAi screens
            GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
            Antibody Information
            Laboratory Generated Antibodies
             

            polyclonal

            (Gailite et al., 2012)
            Commercially Available Antibodies
             
            Other Information
            Relationship to Other Genes
            Source for database identify of

            Source for identity of: rush CG14782

            (Gailite et al., 2012)
            Source for database merge of
            Additional comments
            Other Comments

            dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.

            (Kiger et al., 2003)
            Origin and Etymology
            Discoverer
            Etymology

            Named 'rush hour' due to its overexpression phenotype.

            (Gailite et al., 2012)
            Identification
            External Crossreferences and Linkouts ( 47 )
            Sequence Crossreferences
            NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
            GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
            GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
            RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
            UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information
            Other crossreferences
            BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
            Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
            Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
            Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
            Flygut - An atlas of the Drosophila adult midgut
            GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
            iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
            InterPro - A database of protein families, domains and functional sites
            KEGG Genes - Molecular building blocks of life in the genomic space.
            modMine - A data warehouse for the modENCODE project
            Linkouts
            BioGRID - A database of protein and genetic interactions.
            DroID - A comprehensive database of gene and protein interactions.
            DRSC - Results frm RNAi screens
            FLIGHT - Cell culture data for RNAi and other high-throughput technologies
            FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
            FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
            FlyMine - An integrated database for Drosophila genomics
            InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.
            MIST (protein-protein) - An integrated Molecular Interaction Database
            Synonyms and Secondary IDs (5)
            Datasets (0)
            Study focus (0)
            Experimental Role
            Project
            Project Type
            Title
            References (47)