FlyBase Gene Report: Dmel\Nsun2

TRNA METHYLTRANSFERASES -: tRNA methyltransferases catalyze the transfer of methyl group from methyl donor to a nucleoside residue in an tRNA molecule.

Protein Function (UniProtKB)

RNA methyltransferase that methylates tRNAs. Methylates cytosine to 5-methylcytosine (m5C) at position 34 of intron-containing tRNA(Leu)(CAA) precursors. Required for short-term memory.

(UniProt, Q9W4M9)

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the GBrowse view of Dmel\Nsun2 or the JBrowse view of Dmel\Nsun2 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Comments on Gene Model

Gene model reviewed during 5.52

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

Nsun2-RA

FBtr0070669

NM_143750

2444

746

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

Nsun2-PA

FBpp0070637

84.2

746

6.82

NP_652007

AAF45921

Polypeptides with Identical Sequences

There is only one protein coding transcript and one polypeptide associated with this gene

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Q9W4M9

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Nsun2 using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Nsun2_1

Linkouts

Gene Ontology (10 terms)

Molecular Function (4 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

RNA binding

inferred from mutant phenotype

(Genenncher et al., 2018)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

methyltransferase activity

inferred from biological aspect of ancestor with PANTHER:PTN000516075

(assigned by GO_Central )

(Gaudet et al., 2011)

tRNA (cytosine-5-)-methyltransferase activity

inferred from sequence or structural similarity with HGNC:25994

(Abbasi-Moheb et al., 2012)

inferred from sequence or structural similarity with UniProtKB:Q08J23

(assigned by UniProt )

(UniProt Curators, 2002-)

inferred from biological aspect of ancestor with PANTHER:PTN000516077

(assigned by GO_Central )

(Gaudet et al., 2011)

tRNA binding

inferred from biological aspect of ancestor with PANTHER:PTN000516077

(assigned by GO_Central )

(Gaudet et al., 2011)

Biological Process (3 terms)

Terms Based on Experimental Evidence (2 terms)

CV Term

Evidence

References

short-term memory

inferred from mutant phenotype

(Abbasi-Moheb et al., 2012)

tRNA methylation

inferred from mutant phenotype

(Genenncher et al., 2018)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

RNA methylation

inferred from biological aspect of ancestor with PANTHER:PTN000516075

(assigned by GO_Central )

(Gaudet et al., 2011)

inferred from sequence or structural similarity with HGNC:25994

(Abbasi-Moheb et al., 2012)

tRNA methylation

inferred from sequence or structural similarity with UniProtKB:Q08J23

(assigned by UniProt )

(UniProt Curators, 2002-)

inferred from biological aspect of ancestor with PANTHER:PTN000516077

(assigned by GO_Central )

(Gaudet et al., 2011)

Cellular Component (3 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

nucleus

inferred from direct assay

(Gerbasi et al., 2011)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

cytoplasm

inferred from sequence or structural similarity with UniProtKB:Q08J23

(assigned by UniProt )

(UniProt Curators, 2002-)

inferred from biological aspect of ancestor with PANTHER:PTN000516077

(assigned by GO_Central )

(Gaudet et al., 2011)

nucleolus

inferred from sequence or structural similarity with UniProtKB:Q08J23

(assigned by UniProt )

(UniProt Curators, 2002-)

nucleus

inferred from biological aspect of ancestor with PANTHER:PTN000516077

(assigned by GO_Central )

(Gaudet et al., 2011)

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 12 -- 17

embryonic/larval proventriculus

(Abbasi-Moheb et al., 2012)

embryonic/larval hindgut

(Abbasi-Moheb et al., 2012)

embryonic stage 4 -- 6

organism | ubiquitous

(Abbasi-Moheb et al., 2012)

Additional Descriptive Data

Nsun2 is expressed throughout the embryo with enrichment in the proventriculus and hindgut.

(Abbasi-Moheb et al., 2012)

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

day 5 of adulthood & male -- day 7 of adulthood & male

spermatozoon

(Wasbrough et al., 2010)

adult stage

adult head

• membrane

(Aradska et al., 2015)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

nucleus

inferred from direct assay

(Gerbasi et al., 2011)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\Nsun2 in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\Nsun2

View exonic expression by tissue for Dmel\Nsun2

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0026079

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0026079

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG6133-RA

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG6133

Flygut - An atlas of the Drosophila adult midgut

FBgn0026079

Images

FlyBase Wiki

Image Based Resources

Alleles, Insertions, and Transgenic Constructs

Classical and Insertion Alleles ( 4 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 6 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of Nsun2

Transgenic constructs containing regulatory region of Nsun2

Deletions and Duplications ( 1 )

Disrupted in

Df(1)Nsun2^ex1

(Abbasi-Moheb et al., 2012)

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

viable

Nsun2^ex1

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

Nsun2^GD4248

viable, with Scer\GAL4^Mef2.PR

Nsun2^GD4248

viable, with Scer\GAL4^pnr-MD237

Nsun2^GD4248

viable, with Scer\GAL4^tin.CΔ4

Nsun2^GD4248

Sterility

Allele

female semi-fertile

Nsun2^ex1

male fertile

Nsun2^ex1

Other Phenotypes

Allele

memory defective

Nsun2^ex1

Phenotype manifest in

Allele

Orthologs

Downloads

Download All DIOPT Orthologs

Download All OrthoDB Orthologs

Human Orthologs (via DIOPT v7.1)

Homo sapiens (Human) (7)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Hsap\NSUN2

14 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Model Organism Orthologs (via DIOPT v7.1)

Mus musculus (laboratory mouse) (7)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Mmus\Nsun2

12 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Rattus norvegicus (Norway rat) (7)

Rnor\Nsun2

13 of 13

Yes

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

1 of 13

Xenopus tropicalis (Western clawed frog) (7)

Xtro\nsun2

13 of 12

Yes

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

1 of 12

Danio rerio (Zebrafish) (6)

Drer\nsun2

14 of 15

Yes

1 of 15

1 of 15

1 of 15

1 of 15

1 of 15

Caenorhabditis elegans (Nematode, roundworm) (4)

Cele\Y48G8AL.5

14 of 15

Yes

Cele\nol-2

1 of 15

Cele\nsun-4

1 of 15

Cele\nsun-5

1 of 15

Arabidopsis thaliana (thale-cress) (2)

Atha\AT2G22400

9 of 9

Yes

Atha\AT4G40000

7 of 9

Yes

Saccharomyces cerevisiae (Brewer's yeast) (3)

Scer\NCL1

13 of 15

Yes

Scer\NOP2

1 of 15

Scer\RCM1

1 of 15

Schizosaccharomyces pombe (Fission yeast) (2)

Spom\SPAC17D4.04

11 of 12

Yes

Spom\SPAC23C4.17

11 of 12

Yes

Orthologs in Drosophila Species (via OrthoDB v9.1) ( EOG09190376 )

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila suzukii

Spotted wing Drosophila

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA19379

Drosophila persimilis

Dper\GL21386

Drosophila willistoni

Dwil\GK17644

Drosophila virilis

Dvir\GJ16427

Drosophila mojavensis

Dmoj\GI16150

Drosophila grimshawi

Dgri\GH24818

Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG091502DF )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Musca domestica

House fly

Mdoa\17015177

Glossina morsitans

Tsetse fly

Gmor\GMOY010148

Lucilia cuprina

Australian sheep blowfly

Lcup\FF38_09235

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL013968

Anopheles darlingi

American malaria mosquito

Adar\ADAC008046

Anopheles gambiae

Malaria mosquito

Agam\AGAP002504

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ010001

Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W02RK )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Bombyx mori

Silkmoth

Bmor\BGIBMGA004408

Danaus plexippus

Monarch butterfly

Dple\DPOGS212221-PA

Heliconius melpomene

Postman butterfly

Hmel\HMEL016799

Apis florea

Little honeybee

Aflo\2323814292

Apis mellifera

Western honey bee

Amel\LOC411579

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP12860

Bombus terrestris

Buff-tailed bumblebee

Bter\15215937

Linepithema humile

Argentine ant

Lhum\LH13588

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:00017a

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG030006

Dendroctonus ponderosae

Mountain pine beetle

Dpod\YQE_04290

Tribolium castaneum

Red flour beetle

Tcas\TC009472

Pediculus humanus

Human body louse

Phum\PHUM474660

Rhodnius prolixus

Kissing bug

Rpro\RPRC008552

Cimex lectularius

Bed bug

Clec\CLEC011725

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI010136

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_06524

Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X02WB )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strigamia maritima

European centipede

Smar\SMAR000318

Ixodes scapularis

Black-legged tick

Isca\ISCW003251

Stegodyphus mimosarum

African social velvet spider

Smim\KFM70998.1

Stegodyphus mimosarum

African social velvet spider

Smim\KFM70999.1

Tetranychus urticae

Two-spotted spider mite

Turt\tetur25g01180

Tetranychus urticae

Two-spotted spider mite

Turt\tetur14g01180

Tetranychus urticae

Two-spotted spider mite

Turt\tetur25g01200

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_329423

Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G04FO )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strongylocentrotus purpuratus

Purple sea urchin

Spur\Sp-Nsun2

Ciona intestinalis

Vase tunicate

Cint\ENSCING00000009504

Gallus gallus

Domestic chicken

Ggal\NSUN2

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v7.1)

Drosophila melanogaster (Fruit fly) (4)

Gene Symbol

Score

Source

Alignment

3 of 10

1 of 10

1 of 10

1 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

intellectual disability, autosomal recessive 5

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 1 )

Allele

Disease

Evidence

References

Nsun2^ex1

model of intellectual disability

CEA

(Abbasi-Moheb et al., 2012)

Potential Models Based on Orthology ( 1 )

Human Ortholog

Disease

Evidence

References

NSUN2; NOP2/Sun RNA methyltransferase 2

model of autosomal recessive non-syndromic intellectual disability

IEA

(FlyBase, 2019-)

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v7.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

NSUN2; NOP2/Sun RNA methyltransferase 2

14 of 15

610916

MENTAL RETARDATION, AUTOSOMAL RECESSIVE 5; MRT5

autosomal recessive non-syndromic intellectual disability

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

Nsun2 - CG17124

experimental knowledge based

(Guruharsha et al., 2011)

Nsun2 - Pi3K92E

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Vinayagam et al., 2016)

Nsun2 - Rheb

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Vinayagam et al., 2016)

Nsun2 - Tsc1

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Vinayagam et al., 2016)

Nsun2 - capt

experimental knowledge based

(Guruharsha et al., 2011)

Nsun2 - sima

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Vinayagam et al., 2016)

RNA-protein

Physical Interaction

Assay

References

Nsun2 - tRNA:Asp-GTC-1-1

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-1-10

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-1-11

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-1-12

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-1-2

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-1-3

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-1-4

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-1-5

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-1-6

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-1-7

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-1-8

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-1-9

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-2-1

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Nsun2 - tRNA:Asp-GTC-3-1

anti tag coimmunoprecipitation, cross-linking study, quantitative reverse transcription pcr

(Genenncher et al., 2018)

Summary of Genetic Interactions

esyN Network Diagram

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

69457

DroID - A comprehensive database of gene and protein interactions.

FBgn0026079

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

45064

MIST (protein-protein) - An integrated Molecular Interaction Database

Nsun2

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

External Data

Linkouts

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

1-6

Cytogenetic map

4A5-4A6

Sequence location

X:4,111,156..4,113,734 [-]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

4A5-4A6

Limits computationally determined from genome sequence between P{EP}CG2930^EP1352 and P{EP}EP425

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

1-6

(FlyBase, 2016)

1-6.0

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (3)

Bloomington

33452

w^* P{EP}Nsun2^G493

62495

y¹ v¹; P{TRiP.HMJ24019}attP40/CyO

VDRC

v37601

w¹¹¹⁸; P{GD4248}v37601

Genomic Clones (14)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (91)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequences

BDGP DGC clones

LD45754

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0026079

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0026079

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

45064

Antibody Information

Laboratory Generated Antibodies

polyclonal

(Genenncher et al., 2018)

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for identity of: EG:EG0007.9 CG6133

(Zhao, 1999.11)

Source for identity of: Nsun2 CG6133

(Abbasi-Moheb et al., 2012)

Source for database merge of

Additional comments

FlyBase curator comment: the insertion in the "f06125" Exelixis line (PBac{WH}CG4865^f06125) was originally assigned to the CG6133 gene in FBrf0179797, resulting in the "CG6133^f06125" (FBal0161193) allele. However, FBrf0184340 shows that the insertion is actually within CG4865.

(Bloomington Drosophila Stock Center, 2004.11.6)

Other Comments

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 35 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

45064

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information

Q9W4M9

Other crossreferences

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0026079

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0026079

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Nsun2_1

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG6133

Flygut - An atlas of the Drosophila adult midgut

FBgn0026079

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

45064

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC009472

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG6133

modMine - A data warehouse for the modENCODE project

FBgn0026079

Linkouts

BioGRID - A database of protein and genetic interactions.

69457

DroID - A comprehensive database of gene and protein interactions.

FBgn0026079

DRSC - Results frm RNAi screens

FBgn0026079

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0026079

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG6133-RA

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0026079

FlyMine - An integrated database for Drosophila genomics

FBgn0026079

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

45064

MIST (protein-protein) - An integrated Molecular Interaction Database

Nsun2

Synonyms and Secondary IDs (8)

Reported As

Symbol Synonym

CG6133

(Aw et al., 2017, Kwon et al., 2013, Abbasi-Moheb et al., 2012, Christis and Munro, 2012, Japanese National Institute of Genetics, 2012.5.21, Friedman et al., 2011, Gerbasi et al., 2011, Kong et al., 2010, Wasbrough et al., 2010, Perkins et al., 2009, Katz et al., 2003)

EG:EG0007.9

NSUN2

(Dezi et al., 2016)

NSun2

(Delatte et al., 2016)

Nsun2

(Angelova et al., 2018)

dNsun2

(Abbasi-Moheb et al., 2012)

Name Synonyms

NOP2-Sun domain family, member 2

NOP2-Sun domain family, member 2 ortholog

Secondary FlyBase IDs

FBgn0029695

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

References (47)

Report Sections

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