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Gene Ppyr\T:Ppyr\LUC

General Information
Symbol	Ppyr\T:Ppyr\LUC	Species	P. pyralis
Name	luciferase	Annotation symbol
Feature type	engineered_foreign_gene	FlyBase ID	FBgn0026330
Gene Model Status	Not Applicable	Stock availability	None publicly available
Genomic Location
Chromosome (arm)		Recombination map
Cytogenetic map		Sequence location
Summary Information
Automatically generated summary See sections below for more information	The gene luciferase is referred to in FlyBase by the symbol T:Ppyr\LUC (FBgn0026330). It is a engineered_foreign_gene from T:Ppyr. Its molecular function is unknown. The biological processes in which it is involved are not known. No alleles are reported. It has no annotated transcripts. Gene has not been localized to the genome sequence.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa)
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
Mapped Features
Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
modENCODE Anatomy RNA-Seq
modENCODE Development RNA-Seq
modENCODE Cell Lines RNA-Seq
modENCODE Treatments RNA-Seq
Expression Clusters
External Data & Images
Linkouts
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of T:Ppyr\LUC Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 0 )
For All Alleles Carried on Transgenic Constructs Show
Allele of T:Ppyr\LUC Class Mutagen Stocks Known lesion
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	engineered_foreign_gene   engineered_tag
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions T:Ppyr\LUC allele Gene References
External Data
Linkouts
Orthologs
OrthoDB Orthologs (0) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search No orthologs identified Dipteran inclusive ortholog search No orthologs identified Insect inclusive ortholog search No orthologs identified Arthropod inclusive ortholog search No orthologs identified Metazoa inclusive ortholog search No orthologs identified
Ortholog(s) in Drosophila melanogaster (None identified)
No D. melanogaster orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (0) based on analysis using Dmel annotation version 4.3
No orthologs identified
Stocks & Reagents
Stocks Listed in FlyBase ( 0 )
Genomic Clones ( 0 )
cDNA Clones ( 0 )
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
RNAi & Array Information
Linkouts
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Tags	bftScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) cryAct5C.T:Ppyr\LUC (van Vickle-Chavez and van Gelder, 2007) cryΔ528.Act5C.T:Ppyr\LUC (van Vickle-Chavez and van Gelder, 2007) Ecol\lacZAct5C.T:Ppyr\LUC (Maier et al., 2002) Ecol\lacZAct5C.UGA.PHGPx.UTR.T:Ppyr\LUC (Hirosawa-Takamori et al., 2000) Ecol\lacZAct5C.UGA.Sps2.UTR.T:Ppyr\LUC (Hirosawa-Takamori et al., 2000) Ecol\lacZAct5C.UGA.T:Ppyr\LUC (Hirosawa-Takamori et al., 2000) Ecol\lacZH.Act5C.T:Ppyr\LUC (Maier et al., 2002) Ecol\lacZScer\UAS.UGA.Sps2.UTR.T:Ppyr\LUC (Hirosawa-Takamori et al., 2000) Ecol\lacZScer\UAS.UGA.T:Ppyr\LUC (Hirosawa-Takamori et al., 2000) Eip71CDT:Ppyr\LUC (Wang et al., 2000) Hsp27T:Ppyr\LUC (Wang et al., 2000) let-7Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-2b-1Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-6-1Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-6-2Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-6-3Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-7Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-8Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-9aScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-9bScer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-9bScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-9cScer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-9cScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-10Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-12Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-14Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-31aScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-31bScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-33Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-34Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-79Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-79Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-92aScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-92bScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-100Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-124Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-133Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-137Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-184Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-190Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-210Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-252Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-263bScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-274Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-275Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-275Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-276aScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-276bScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-277Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-278Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-279Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-280Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-281-1Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-281-1Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-281-2Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-282Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-284Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-285Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-286Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-303Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-303Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-304Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-305Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-305Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-306Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-307aScer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-308Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-309Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-310Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-310Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-311Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-311Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-312Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-312Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-313Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-318Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-375Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-927Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-929Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-932Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-954Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-955Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-956Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-958Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-960Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-961Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-963Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-963Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-964Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-964Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-966Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-970Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-973Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-974Scer\UAS.T:Ppyr\LUC (Transgenic RNAi Project, 2012.9.7) mir-975Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-976Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-976Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-977Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-978Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-980Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-982Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-982Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-983-1Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-983-1Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-983-2Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-984Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-984Scer\UAS.T:Ppyr\LUC (Transgenic RNAi Project, 2012.9.7) mir-985Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-986Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-987Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-988Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-989Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-991Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-992Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-993Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-994Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-995Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-999Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-999Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1000Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1001Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1003Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1004Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1006Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1007Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1009Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1010Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1011Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1012Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1013Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1015Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-1017Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) mir-4966Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-4969Scer\UAS.cluster.T:Ppyr\LUC (Bejarano et al., 2012) mir-iab-4Scer\UAS.T:Ppyr\LUC (Bejarano et al., 2012) per8.0.T:Ppyr\LUC (Veleri et al., 2003, Veleri et al., 2003, Wuelbeck et al., 2005) perBG.T:Ppyr\LUC (Stanewsky et al., 1997, Stanewsky et al., 1998, Belvin et al., 1999, Giebultowicz et al., 2000, Kaneko et al., 2000, Krishnan et al., 2001, Helfrich-Forster et al., 2001, Glaser and Stanewsky, 2005, Wuelbeck et al., 2005) perXLG.T:Ppyr\LUC (Veleri et al., 2003, Veleri et al., 2003, Glaser and Stanewsky, 2005) Ppyr\LUCper.NOG (Glaser and Stanewsky, 2005, Wuelbeck et al., 2005) timT:Ppyr\LUC (Williams et al., 2001, Williams et al., 2001)
Additional comments
Other Comments
Tag or Foreign Gene Data
	Foreign sequence; species == Photinus pyralis; function tag == 'LUC'; UniProt:P08659.
External Crossreferences & Linkouts
Sequence Crossreferences
Other Crossreferences
Linkouts
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	T:Ppyr\LUC
Name Synonym	luciferase
Secondary FlyBase IDs
References ( 20 )
Research paper	van Vickle-Chavez and van Gelder, 2007, J. Biol. Chem. 282(14): 10561--10566 Action spectrum of Drosophila cryptochrome. [FBrf0200364] Glaser and Stanewsky, 2005, Curr. Biol. 15(15): 1352--1363 Temperature synchronization of the Drosophila circadian clock. [FBrf0187310] Wuelbeck et al., 2005, Genetics 169(2): 751--766 The novel Drosophila tim(blind) mutation affects behavioral rhythms but not periodic eclosion. [FBrf0187663] Veleri et al., 2003, Curr. Biol. 13(20): 1758--1767 A self-sustaining, light-entrainable circadian oscillator in the Drosophila brain. [FBrf0167403] Maier et al., 2002, Proc. Natl. Acad. Sci. U.S.A. 99(24): 15480--15485 Two isoforms of the Notch antagonist Hairless are produced by differential translation initiation. [FBrf0156038] Helfrich-Forster et al., 2001, Neuron 30(1): 249--261 The circadian clock of fruit flies is blind after elimination of all known photoreceptors. [FBrf0135910] Krishnan et al., 2001, Nature 411(6835): 313--317 A new role for cryptochrome in a Drosophila circadian oscillator. [FBrf0135900] Williams et al., 2001, Science 293(5538): 2251--2256 A circadian output in Drosophila mediated by Neurofibromatosis-1 and Ras/MAPK. [FBrf0138535] Giebultowicz et al., 2000, Curr. Biol. 10(2): 107--110 Transplanted Drosophila excretory tubules maintain circadian clock cycling out of phase with the host. [FBrf0125137] Hirosawa-Takamori et al., 2000, EMBO Rep. 1(5): 441--446 The class 2 selenophosphate synthetase gene of Drosophila contains a functional mammalian-type SECIS. [FBrf0133278] Kaneko et al., 2000, J. Neurobiol. 43(3): 207--233 Disruption of synaptic transmission or clock-gene-product oscillations in circadian pacemaker cells of Drosophila cause abnormal behavioral rhythms. [FBrf0128517] Wang et al., 2000, Mol. Cell. Biol. 20(11): 3870--3879 Molecular determinants of differential ligand sensitivities of insect ecdysteroid receptors. [FBrf0127381] Belvin et al., 1999, Neuron 22(4): 777--787 The Drosophila dCREB2 gene affects the circadian clock. [FBrf0108141] Stanewsky et al., 1998, Cell 95(5): 681--692 The cryb mutation identifies cryptochrome as a circadian photoreceptor in Drosophila. [FBrf0105937] Stanewsky et al., 1997, EMBO J. 16(16): 5006--5018 Multiple circadian-regulated elements contribute to cycling period gene expression in Drosophila. [FBrf0096339]
Supplementary material	Bejarano et al., 2012, Development 139(15): Table S2. Detailed descriptions of miRNA gain-of-function phenotypes. [FBrf0219415] Veleri et al., 2003, Curr. Biol. 13(20): A self-sustaining, light-entrainable circadian oscillator in the Drosophila brain. [FBrf0178957] Williams et al., 2001, Science 293(5538): A circadian output in Drosophila mediated by Neurofibromatosis-1 and Ras/MAPK. [FBrf0141792]
Personal communication to FlyBase	Transgenic RNAi Project, 2012.9.7, Unpublished UAS-mir lines from the Transgenic RNAi Project. Unpublished UAS-mir lines from the Transgenic RNAi Project. [FBrf0219416]
FlyBase analysis	FlyBase Curators, 1992-, Summary information describing the origin of tags and foreign genes in FlyBase. Summary information describing the origin of tags and foreign genes in FlyBase. [FBrf0199194]