FlyBase Gene Report: Dmel\STUB1

General Information

Symbol

Dmel\STUB1

Species

D. melanogaster

Name

STIP1 homology and U-box containing protein 1

Annotation Symbol

CG5203

Feature Type

protein_coding_gene

FlyBase ID

FBgn0027052

Gene Model Status

Current

Stock Availability

6 publicly available

Gene Summary

STIP1 homology and U-box containing protein 1 (STUB1) encodes a ubiquitin protein ligase involved in insulin signaling pathway regulation and protein ubiquitination. [Date last reviewed: 2019-07-11] (FlyBase Gene Snapshot)

All Summaries

Gene Snapshot
Alliance
Auto summary
Pathway
Gene Group
Interactive Fly

Also Known As

CHIP, dCHIP

Key Links

Genomic Location

Cytogenetic map

31E2-31E2

Sequence location

2L:10,437,548..10,439,240 [+]

Recombination map

2-42

RefSeq locus

NT_033779 REGION:10437548..10439240

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse GBrowse

Help me choose

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

GO Summary Ribbons

Gene Ontology (GO) Annotations (12 terms)

Molecular Function (3 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

enables ubiquitin protein ligase activity

inferred from direct assay

(Nikolay et al., 2004)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

enables chaperone binding

inferred from biological aspect of ancestor with PANTHER:PTN002929542

(assigned by GO_Central )

(Gaudet et al., 2011)

enables Hsp90 protein binding

inferred from sequence or structural similarity with UniProtKB:Q9UNE7

(assigned by BHF-UCL )

(Cardiovascular Gene Annotation Project members, 2007-)

enables ubiquitin protein ligase activity

inferred from biological aspect of ancestor with PANTHER:PTN002929542

(assigned by GO_Central )

(Gaudet et al., 2011)

Biological Process (7 terms)

Terms Based on Experimental Evidence (3 terms)

CV Term

Evidence

References

involved_in negative regulation of insulin receptor signaling pathway

inferred from direct assay

(Tawo et al., 2017)

involved_in positive regulation of proteolysis

inferred from direct assay

(Tawo et al., 2017)

involved_in protein ubiquitination

inferred from direct assay

(Nikolay et al., 2004)

Terms Based on Predictions or Assertions (5 terms)

CV Term

Evidence

References

involved_in cellular response to misfolded protein

inferred from biological aspect of ancestor with PANTHER:PTN002929542

(assigned by GO_Central )

(Gaudet et al., 2011)

involved_in positive regulation of proteolysis

inferred from biological aspect of ancestor with PANTHER:PTN002929542

(assigned by GO_Central )

(Gaudet et al., 2011)

involved_in proteasome-mediated ubiquitin-dependent protein catabolic process

inferred from biological aspect of ancestor with PANTHER:PTN002929542

(assigned by GO_Central )

(Gaudet et al., 2011)

involved_in protein polyubiquitination

inferred from biological aspect of ancestor with PANTHER:PTN002929542

(assigned by GO_Central )

(Gaudet et al., 2011)

involved_in protein quality control for misfolded or incompletely synthesized proteins

inferred from biological aspect of ancestor with PANTHER:PTN002929542

(assigned by GO_Central )

(Gaudet et al., 2011)

Cellular Component (2 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

colocalizes_with Z disc

inferred from direct assay

(Arndt et al., 2010)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

is_active_in cytoplasm

inferred from biological aspect of ancestor with PANTHER:PTN002929542

(assigned by GO_Central )

(Gaudet et al., 2011)

Gene Group (FlyBase)

U-BOX UBIQUITIN LIGASES

Pathway (FlyBase)

Negative Regulators of Insulin-like Receptor Signaling Pathway

Protein Family (UniProt)

Protein Signatures (InterPro)

Summaries

Gene Snapshot

STIP1 homology and U-box containing protein 1 (STUB1) encodes a ubiquitin protein ligase involved in insulin signaling pathway regulation and protein ubiquitination. [Date last reviewed: 2019-07-11]

Gene Group (FlyBase)

U-BOX UBIQUITIN LIGASES -: E3 (ubiquitin) ligases interact with both ubiquitin-E2 (ubiquitin-conjugating) enzymes and the target protein, transferring the ubiquitin from the E2 to the substrate. U-box ubiquitin ligases (UULs) possess a domain structurally related the RING finger domain found in many E3s, but lacks Zn²⁺-co-ordinating residues. Some UULs have been found to possess E4 activity, co-ordinating with E1, E2 and E3 enzymes to transfer polyubiquitin to target proteins. (Adapted from PMID:20979629 and PMID:16250894).

Pathway (FlyBase)

Negative Regulators of Insulin-like Receptor Signaling Pathway -: Negative regulators of the Insulin-like Receptor signaling pathway suppress Insulin-like receptor (InR) activation or the activity of intracellular effectors. (Adapted from FBrf0232297, FBrf0230017 and FBrf0229989).

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the JBrowse view of Dmel\STUB1 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Structure New Section

Protein 3D structure (Predicted by AlphaFold) (AlphaFold entry Q9XYW6)

If you don't see the viewer to the right, refresh your browser.

Model Confidence:

Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Comments on Gene Model

Gene model reviewed during 5.46

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

STUB1-RA

FBtr0080027

NM_058093

1277

289

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

STUB1-PA

FBpp0079617

33.9

289

6.19

NP_477441

AAF52954

Polypeptides with Identical Sequences

There is only one protein coding transcript and one polypeptide associated with this gene

Additional Polypeptide Data and Comments

Reported size (kDa)

289 (aa)

(Ballinger et al., 1999)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\STUB1 using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

CHIP_1

Linkouts

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

expression microarray

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

eye

(Xu et al., 2004)

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 1 -- 3

organism

Comment: maternally deposited

(Fisher et al., 2012)

embryonic stage 4 -- 6

organism

(Fisher et al., 2012)

Additional Descriptive Data

Eye-enriched transcripts determined by ratio of expression level in wild-type heads. versus expression level in so heads.

(Xu et al., 2004)

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

• membrane

(Aradska et al., 2015)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

colocalizes_with Z disc

inferred from direct assay

(Arndt et al., 2010)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\STUB1 in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\STUB1

View exonic expression by tissue for Dmel\STUB1

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0027052

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

34433/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0027052

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0027052

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0027052

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG5203

Flygut - An atlas of the Drosophila adult midgut

FBgn0027052

Images

FlyExpress - Embryonic expression images (BDGP data)

Show all FlyExpress processed images for Dmel\STUB1

Stages(s) 4-6
Stages(s) 7-8
Stages(s) 9-10
Stages(s) 11-12

FlyBase Wiki

Image Based Resources

Alleles, Insertions, Transgenic Constructs, and Aberrations

Classical and Insertion Alleles ( 4 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 9 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of STUB1

Transgenic constructs containing regulatory region of STUB1

Aberrations (Deficiencies and Duplications) ( 0 )

Inferred from experimentation ( 0 )

Inferred from location ( 0 )

Alleles Representing Disease-Implicated Variants

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

STUB1^GD10538

viable, with Scer\GAL4^Mef2.PR

STUB1^GD10538

viable, with Scer\GAL4^pnr-MD237

STUB1^GD10538

viable, with Scer\GAL4^tin.CΔ4

STUB1^GD10538

Other Phenotypes

Allele

abnormal locomotor behavior | adult stage

chemical sensitive, with Scer\GAL4^Act5C.PI

STUB1^GD10538

short lived, with Scer\GAL4^Act5C.PI

STUB1^GD10538

short lived | RU486 conditional, with Scer\GAL4^TIGS-2

STUB1^UAS.cAa

Phenotype manifest in

Allele

mitochondrial crista | adult stage | progressive

mitochondrion | adult stage | progressive

Orthologs

Downloads

Download All DIOPT Orthologs

Human Orthologs (via DIOPT v8.0)

Homo sapiens (Human) (1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Hsap\STUB1

15 of 15

Yes

Model Organism Orthologs (via DIOPT v8.0)

Mus musculus (laboratory mouse) (1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Mmus\Stub1

14 of 15

Yes

Rattus norvegicus (Norway rat) (1)

Rnor\Stub1

13 of 13

Yes

Xenopus tropicalis (Western clawed frog) (1)

Xtro\stub1

9 of 12

Yes

Danio rerio (Zebrafish) (1)

Drer\stub1

14 of 15

Yes

Caenorhabditis elegans (Nematode, roundworm) (1)

Cele\chn-1

13 of 15

Yes

Arabidopsis thaliana (thale-cress) (1)

Atha\CHIP

9 of 9

Yes

Saccharomyces cerevisiae (Brewer's yeast) (3)

Scer\TAH1

3 of 15

Yes

Scer\TOM70

1 of 15

Scer\TOM71

1 of 15

Schizosaccharomyces pombe (Fission yeast) (0)

No records found.

Other Organism Orthologs (via OrthoDB)

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v8.0)

Drosophila melanogaster (Fruit fly) (10)

Gene Symbol

Score

Source

Alignment

1 of 10

1 of 10

HIP

1 of 10

HIP-R

1 of 10

Sgt

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

1 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 2 )

Human Ortholog

Disease

Evidence

References

STUB1; STIP1 homology and U-box containing protein 1

model of autosomal recessive spinocerebellar ataxia 16

IEA

(FlyBase, 2019-)

model of cerebellar ataxia type 48

IEA

(FlyBase, 2019-)

Modifiers Based on Experimental Evidence ( 4 )

Allele

Disease

Interaction

References

STUB1^HMS00889

ameliorates Alzheimer's disease 1

modeled by Hsap\APP^695.UAS

(Zhuang et al., 2020)

STUB1^HMS00986

exacerbates Machado-Joseph disease

modeled by Hsap\ATXN3^{tr.Q78.UAS.Tag:HA}

(Tsou et al., 2015)

ameliorates Alzheimer's disease 1

modeled by Hsap\APP^695.UAS

(Zhuang et al., 2020)

STUB1^UAS.cCa

ameliorates Parkinson's disease

modeled by Pink1^B9

(Chen et al., 2017)

modeled by park¹, park^Δ21

(Chen et al., 2017)

STUB1^I

ameliorates Alzheimer's disease 1

modeled by Hsap\APP^695.UAS

(Zhuang et al., 2020)

Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

STUB1; STIP1 homology and U-box containing protein 1

15 of 15

607207

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

STUB1 - InR

enzymatic study, western blot

(Tawo et al., 2017)

STUB1 - mst

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Palumbo et al., 2015)

STUB1 - stv

anti tag coimmunoprecipitation, western blot

(Arndt et al., 2010)

Summary of Genetic Interactions

esyN Network Diagram

esyN Network Key:

Suppression

Enhancement

View in Interactions Browser

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

park

suppressible

STUB1

(Chen et al., 2017)

Pink1

suppressible

STUB1

(Chen et al., 2017)

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

60514

DroID - A comprehensive database of gene and protein interactions.

FBgn0027052

MIST (protein-protein) - An integrated Molecular Interaction Database

STUB1

Pathways

Signaling Pathways (FlyBase)

Negative Regulators of Insulin-like Receptor Signaling Pathway -: Negative regulators of the Insulin-like Receptor signaling pathway suppress Insulin-like receptor (InR) activation or the activity of intracellular effectors. (Adapted from FBrf0232297, FBrf0230017 and FBrf0229989).

Metabolic Pathways

FlyMet - A comprehensive tissue-specific metabolomics resource for Drosophila.

FBgn0027052

External Data

Linkouts

KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

2-42

Cytogenetic map

31E2-31E2

Sequence location

2L:10,437,548..10,439,240 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

31E2-31E2

Limits computationally determined from genome sequence between P{lacW}KdelR^k00311 and P{lacW}l(2)k09116^k09116&P{lacW}Fatp^k10307

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

2-42

(FlyBase, 2016)

2-35.5

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (6)

Aberrations including deletions of this gene Aberrations including duplications of this gene

Bloomington

80097

y¹ w^*; TI{TI}STUB1^EGFP

80090

y¹ w^*; TI{y^wing2+}STUB1^ΔCDS

33938

y¹ sc^* v¹ sev²¹; P{TRiP.HMS00889}attP2

34017

y¹ sc^* v¹ sev²¹; P{TRiP.HMS00986}attP2

VDRC

v107447

P{KK107392}VIE-260B

v34124

w¹¹¹⁸; P{GD10538}v34124

Genomic Clones (26)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (78)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

RE01069

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0027052

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0027052

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

34433

Antibody Information

Laboratory Generated Antibodies

polyclonal

(Arndt et al., 2010)

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for identity of: STUB1 CHIP

(FlyBase, 2009-)

Source for database merge of

Additional comments

Named 'CHIP' after the human ortholog.

(FlyBase, 2009-)

Renamed from 'CHIP' (originally named using the symbol of the orthologous human gene) to 'STUB1' (fullname 'STIP1 homology and U-box containing protein 1') to match the current human nomenclature and to reduce confusion with the different 'Chi' (fullname 'Chip') gene.

(FlyBase, 2009-)

Other Comments

Origin and Etymology

Discoverer

Etymology

Named 'STUB1' after the human ortholog.

(FlyBase, 2009-)

Identification

External Crossreferences and Linkouts ( 60 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

34433

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/GCRP - The gene-centric reference proteome (GCRP) provides a 1:1 mapping between genes and UniProt accessions in which a single 'canonical' isoform represents the product(s) of each protein-coding gene.

Q9XYW6

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Other crossreferences

AlphaFold DB - AlphaFold provides open access to protein structure predictions for the human proteome and other key proteins of interest, to accelerate scientific research.

Q9XYW6

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0027052

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0027052

DRscDB - A single-cell RNA-seq resource for data mining and data comparison across species

34433/tissue=All

EMBL-EBI Single Cell Expression Atlas - Single cell expression across species

FBgn0027052

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

CHIP_1

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

FBgn0027052

FlyAtlas2 - A Drosophila melanogaster expression atlas with RNA-Seq, miRNA-Seq and sex-specific data

FBgn0027052

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG5203

Flygut - An atlas of the Drosophila adult midgut

FBgn0027052

FlyMet - A comprehensive tissue-specific metabolomics resource for Drosophila.

FBgn0027052

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

34433

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG5203

MARRVEL_MODEL - MARRVEL (model organism gene)

34433

modMine - A data warehouse for the modENCODE project

FBgn0027052

Linkouts

BioGRID - A database of protein and genetic interactions.

60514

DroID - A comprehensive database of gene and protein interactions.

FBgn0027052

DRSC - Results frm RNAi screens

FBgn0027052

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0027052

FlyMine - An integrated database for Drosophila genomics

FBgn0027052

KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.

MIST (protein-protein) - An integrated Molecular Interaction Database

STUB1

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Synonyms and Secondary IDs (9)

Reported As

Symbol Synonym

CG5203

(Ying et al., 2011, Ni et al., 2010.12.1, Keleman et al., 2009.8.5, Gandhi et al., 2007, Brandt, 2006)

CHIP

(Brooks et al., 2020, Zhuang et al., 2020, Chen et al., 2017, Palumbo et al., 2015, Érdi et al., 2012, Japanese National Institute of Genetics, 2012.5.21, Du et al., 2011, Toku et al., 2011, Arndt et al., 2010, Mudiganti et al., 2010, Brandt, 2006)

Chip

(Tsou et al., 2015, Ying et al., 2011, Demontis and Perrimon, 2010, Marin, 2010)

STUB1

(Gupta and Stocker, 2020, Hall et al., 2019, Meltzer et al., 2019)

Stub1

(Li-Kroeger et al., 2018)

dCHIP

(Tawo et al., 2017, Arndt et al., 2010, Nikolay et al., 2004)

Name Synonyms

CHIP

CHIP ortholog

NM 058093.3

(Marin, 2010)

STIP1 homology and U-box containing protein 1

Secondary FlyBase IDs

Datasets (8)

Study focus (0)

Experimental Role

Project

Project Type

Title

Study result (8)

Result

Result Type

Title

scRNAseq_2020_Cattenoz_NI_seq_clustering

cell clustering analysis

Clustering analysis of hemocytes from non-infested third instar larvae

scRNAseq_2020_Cattenoz_WI_seq_clustering

cell clustering analysis

Clustering analysis of hemocytes from wasp-infested third instar larvae

scRNAseq_2020_Cho_NI72LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from non-infested larvae at 72 h after egg-laying

scRNAseq_2020_Cho_NI96LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from non-infested larvae at 96 h after egg-laying

scRNAseq_2020_Cho_NI120LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from non-infested larvae at 120 h after egg-laying

scRNAseq_2020_Cho_WI96LG_seq_clustering

cell clustering analysis

Clustering analysis of lymph gland cells from wasp-infested larvae at 96 h after egg-laying

scRNAseq_2020_Cho_NI96HL_seq_clustering

cell clustering analysis

Clustering analysis of circulating hemocytes from non-infested larvae at 96 h after egg-laying

scRNAseq_2020_Cho_NI120HL_seq_clustering

cell clustering analysis

Clustering analysis of circulating hemocytes from non-infested larvae at 120 h after egg-laying

References (57)

The following external sites may use different assemblies or annotations than FlyBase.

Report Sections