General Information Symbol Dmel\ Inx2Species D. melanogaster Name Innexin 2 Annotation symbol CG4590 Feature type protein_coding_gene FlyBase ID FBgn0027108 Gene Model Status Current Stock availability 20 publicly
available Also Known As Inx2, inx-2, prp33, kropf, Dm-inx2, Ix2, l(1)G0035, l(1)G0043, l(1)G0118 Genomic Location Chromosome (arm) X Recombination map Cytogenetic map 6E4-6E4 Sequence location X:6,892,705..6,898,184 [+]
Genomic Maps
Summary Information Automatically generated summary
See sections below for more information The gene
Innexin 2 is referred to in FlyBase by the symbol
Dmel\Inx2 (CG4590, FBgn0027108). It is a protein_coding_gene from
Drosophila melanogaster . There is experimental evidence that it has the
molecular function : gap junction channel activity. There is experimental evidence that it is involved in the
biological process : intercellular transport; morphogenesis of embryonic epithelium; olfactory behavior; foregut morphogenesis; germarium-derived female germ-line cyst formation; germarium-derived egg chamber formation; cell communication.
44 alleles are reported . The
phenotypes of these alleles are annotated with: multicellular structure; organ system; anatomical structure; non-connected developing system; embryonic foregut; embryonic hindgut; portion of tissue; eo support cell; organism subdivision; proventriculus primordium. It has
4 annotated transcripts and
4 annotated polypeptides .
Protein features are: Innexin. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages, during early pupal stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult central nervous system, larval midgut, adult fat body, larval trachea, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult crop, adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval salivary gland, adult female reproductive system, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1640798_a_at completely aligns to an exonic region of only a subset of 2 of the 3 FlyBase-annotated transcript isoforms of inx2. Gene sequence location is
X:6892705..6898184 .
User Contributed Data
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It currently only tracks new links between this FlyBase report and other
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FB2013_03
FB2013_02
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Detailed Mapping Data
FlyBase Computed Cytological Location
Experimentally Determined Cytological Location
6F1-6F2
(determined by in situ hybridisation) 6F1--4 (determined by in situ hybridisation) 6F5--6 (determined by in situ hybridisation) 6E1--2 (determined by in situ hybridisation) 6F1--8 (determined by in situ hybridisation)
6E4-6E5
(determined by in situ hybridisation)
6F1-6F8
(determined by in situ hybridisation)
6F1-6F2
(determined by in situ hybridisation)
6E4-6E5
(determined by in situ hybridisation)
6E1-6E5
(determined by in situ hybridisation) 6F1--4 (determined by in situ hybridisation) 6F (determined by in situ hybridisation) 6E4--5 (determined by in situ hybridisation) 6F1--2 (determined by in situ hybridisation)
6E1-6E2
(determined by in situ hybridisation) 6E4--5 (determined by in situ hybridisation) 6F1--2 (determined by in situ hybridisation)
Experimentally Determined Recombination Data
Location Left of (cM) Right of (cM) Notes Gene Model & Products Comments on Gene
Model Gene model reviewed during 5.45
Transcript Data Annotated Transcripts Additional Transcript Data
& Comments Reported size (kB) Comments External Data Crossreferences
Polypeptide Data Annotated
Polypeptides Additional Polypeptide
Data & Comments Reported size (kDa) Comments External Data Linkouts Crossreferences
domains - A database of protein families, domains, and functional sites
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank UniProtKB/Swiss-Prot UniProtKB/TrEMBL Mapped Features Mapped Features have been reorganized, please
see this article for details. Additional mapped features and mutations can
be found on GBrowse or related reports. External Data Linkouts Crossreferences Expression Data Transcript ExpressionComment: maternally deposited
Comment: reported as procephalic ectoderm primordium
Comment: reported as procephalic ectoderm primordium
Comment: reported as procephalic ectoderm primordium
Comment: reported as procephalic ectoderm primordium
Comment: reported as procephalic ectoderm primordium
Comment: reported as procephalic ectoderm primordium
Comment: reported as procephalon primordium
Comment: reported as procephalon primordium
Comment: reported as procephalon primordium
Comment: reported as procephalon primordium
Comment: reported as procephalon primordium
Comment: reported as procephalon primordium
Additional Descriptive Data
Marker for Subcellular Localization CV Term Polypeptide Expression
Additional Descriptive Data
Marker for Subcellular Localization (GO Cellular Component) inferred from direct assay
inferred from direct assay
inferred from direct assay
inferred from direct assay
(assigned by UniProtKB)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference
FlyAtlas Anatomy Microarray
Linear, scaled to maximum expression level
Tissue
Expression Level
Larval Central Nervous System
855.1
Larval Midgut
563.2
Larval Hindgut
412.2
Larval Malpighian Tubules
464.4
Larval Fat Body
78.2
Larval Salivary Gland
175.5
Larval Trachea
964.975
Larval Carcass
815.375
Adult Head
417.8
Adult Eye
401.7
Adult Brain
662.4
Adult Thoracic-Abdominal Ganglion
1004.6
Adult Crop
280.1
Adult Midgut
318.2
Adult Hindgut
199.7
Adult Malpighian Tubules
132.9
Adult Fat Body
506.3
Adult Salivary Gland
18.8
Adult Heart
160.55
Adult VirginFemale Spermatheca
140.8
Adult InseminatedFemale Spermatheca
121.3
Adult Ovary
448.9
Adult Testis
33.4
Adult Male Accessory Gland
80.1
Adult Carcass
209.8
Expression Level Scale
None
Low
Moderate
High
Very high
Linear, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
(855.1)
Larval Midgut
(563.2)
Larval Hindgut
412.2
Larval Malpighian Tubules
464.4
Larval Fat Body
78.2
Larval Salivary Gland
175.5
Larval Trachea
(964.975)
Larval Carcass
(815.375)
Adult Head
417.8
Adult Eye
401.7
Adult Brain
(662.4)
Adult Thoracic-Abdominal Ganglion
(1004.6)
Adult Crop
280.1
Adult Midgut
318.2
Adult Hindgut
199.7
Adult Malpighian Tubules
132.9
Adult Fat Body
506.3
Adult Salivary Gland
18.8
Adult Heart
160.55
Adult VirginFemale Spermatheca
140.8
Adult InseminatedFemale Spermatheca
121.3
Adult Ovary
448.9
Adult Testis
33.4
Adult Male Accessory Gland
80.1
Adult Carcass
209.8
Expression Level Scale
None
Low
Moderate
High
Linear, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
855.1
Larval Midgut
563.2
Larval Hindgut
412.2
Larval Malpighian Tubules
464.4
Larval Fat Body
78.2
Larval Salivary Gland
175.5
Larval Trachea
964.975
Larval Carcass
815.375
Adult Head
417.8
Adult Eye
401.7
Adult Brain
662.4
Adult Thoracic-Abdominal Ganglion
1004.6
Adult Crop
280.1
Adult Midgut
318.2
Adult Hindgut
199.7
Adult Malpighian Tubules
132.9
Adult Fat Body
506.3
Adult Salivary Gland
18.8
Adult Heart
160.55
Adult VirginFemale Spermatheca
140.8
Adult InseminatedFemale Spermatheca
121.3
Adult Ovary
448.9
Adult Testis
33.4
Adult Male Accessory Gland
80.1
Adult Carcass
209.8
Expression Level Scale
None
Low
Moderate
High
Very high
Linear, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
855.1
Larval Midgut
563.2
Larval Hindgut
412.2
Larval Malpighian Tubules
464.4
Larval Fat Body
78.2
Larval Salivary Gland
175.5
Larval Trachea
964.975
Larval Carcass
815.375
Adult Head
417.8
Adult Eye
401.7
Adult Brain
662.4
Adult Thoracic-Abdominal Ganglion
1004.6
Adult Crop
280.1
Adult Midgut
318.2
Adult Hindgut
199.7
Adult Malpighian Tubules
132.9
Adult Fat Body
506.3
Adult Salivary Gland
18.8
Adult Heart
160.55
Adult VirginFemale Spermatheca
140.8
Adult InseminatedFemale Spermatheca
121.3
Adult Ovary
448.9
Adult Testis
33.4
Adult Male Accessory Gland
80.1
Adult Carcass
209.8
Expression Level Scale
Very high
log, scaled to maximum expression level
Tissue
Expression Level
Larval Central Nervous System
855.1
Larval Midgut
563.2
Larval Hindgut
412.2
Larval Malpighian Tubules
464.4
Larval Fat Body
78.2
Larval Salivary Gland
175.5
Larval Trachea
964.975
Larval Carcass
815.375
Adult Head
417.8
Adult Eye
401.7
Adult Brain
662.4
Adult Thoracic-Abdominal Ganglion
1004.6
Adult Crop
280.1
Adult Midgut
318.2
Adult Hindgut
199.7
Adult Malpighian Tubules
132.9
Adult Fat Body
506.3
Adult Salivary Gland
18.8
Adult Heart
160.55
Adult VirginFemale Spermatheca
140.8
Adult InseminatedFemale Spermatheca
121.3
Adult Ovary
448.9
Adult Testis
33.4
Adult Male Accessory Gland
80.1
Adult Carcass
209.8
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
(855.1)
Larval Midgut
563.2
Larval Hindgut
412.2
Larval Malpighian Tubules
464.4
Larval Fat Body
78.2
Larval Salivary Gland
175.5
Larval Trachea
(964.975)
Larval Carcass
(815.375)
Adult Head
417.8
Adult Eye
401.7
Adult Brain
662.4
Adult Thoracic-Abdominal Ganglion
(1004.6)
Adult Crop
280.1
Adult Midgut
318.2
Adult Hindgut
199.7
Adult Malpighian Tubules
132.9
Adult Fat Body
506.3
Adult Salivary Gland
18.8
Adult Heart
160.55
Adult VirginFemale Spermatheca
140.8
Adult InseminatedFemale Spermatheca
121.3
Adult Ovary
448.9
Adult Testis
33.4
Adult Male Accessory Gland
80.1
Adult Carcass
209.8
Expression Level Scale
None
Low
Moderate
High
log, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
855.1
Larval Midgut
563.2
Larval Hindgut
412.2
Larval Malpighian Tubules
464.4
Larval Fat Body
78.2
Larval Salivary Gland
175.5
Larval Trachea
964.975
Larval Carcass
815.375
Adult Head
417.8
Adult Eye
401.7
Adult Brain
662.4
Adult Thoracic-Abdominal Ganglion
1004.6
Adult Crop
280.1
Adult Midgut
318.2
Adult Hindgut
199.7
Adult Malpighian Tubules
132.9
Adult Fat Body
506.3
Adult Salivary Gland
18.8
Adult Heart
160.55
Adult VirginFemale Spermatheca
140.8
Adult InseminatedFemale Spermatheca
121.3
Adult Ovary
448.9
Adult Testis
33.4
Adult Male Accessory Gland
80.1
Adult Carcass
209.8
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
855.1
Larval Midgut
563.2
Larval Hindgut
412.2
Larval Malpighian Tubules
464.4
Larval Fat Body
78.2
Larval Salivary Gland
175.5
Larval Trachea
964.975
Larval Carcass
815.375
Adult Head
417.8
Adult Eye
401.7
Adult Brain
662.4
Adult Thoracic-Abdominal Ganglion
1004.6
Adult Crop
280.1
Adult Midgut
318.2
Adult Hindgut
199.7
Adult Malpighian Tubules
132.9
Adult Fat Body
506.3
Adult Salivary Gland
18.8
Adult Heart
160.55
Adult VirginFemale Spermatheca
140.8
Adult InseminatedFemale Spermatheca
121.3
Adult Ovary
448.9
Adult Testis
33.4
Adult Male Accessory Gland
80.1
Adult Carcass
209.8
Expression Level Scale
None
Low
Moderate
High
Very high
Heatmap
Tissue
Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass
FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level
Tissue
Adult Expression Level
NA
Head
417.8
NA
Eye
401.7
NA
Brain
662.4
855.1
Central Nervous System
NA
NA
Thoracic-Abdominal Ganglion
1004.6
NA
Crop
280.1
563.2
Midgut
318.2
412.2
Hindgut
199.7
464.4
Malpighian Tubules
132.9
78.2
Fat Body
506.3
175.5
Salivary Gland
no informative data
NA
Heart
160.55
964.975
Trachea
NA
NA
VirginFemale Spermatheca
140.8
NA
InseminatedFemale Spermatheca
121.3
NA
Ovary
448.9
NA
Testis
33.4
NA
Male Accessory Gland
80.1
815.375
Carcass
209.8
modENCODE Anatomy RNA-Seq
Linear, scaled to maximum expression level
Tissue
Expression Level
imaginal disc, larvae L3 wandering
88
central nervous system, larvae L3
61
central nervous system, pupae P8
33
head, virgin 1-day female
40
head, virgin 4-day female
22
head, virgin 20-day female
12
head, mated 1-day female
28
head, mated 4-day female
27
head, mated 20-day female
11
head, mated 1-day male
36
head, mated 4-day male
38
head, mated 20-day male
27
salivary gland, larvae L3 wandering
4
salivary gland, white prepupae
207
digestive system, larvae L3 wandering
22
digestive system, 1-day adult
18
digestive system, 4-day adult
19
digestive system, 20-day adult
11
fat body, larvae L3 wandering
8
fat body, white prepupae
20
fat body, pupae P8
20
carcass, larvae L3 wandering
81
carcass, 1-day adult
16
carcass, 4-day adult
15
carcass, 20-day adult
9
ovary, virgin 4-day female
15
ovary, mated 4-day female
12
testis, mated 4-day male
3
accessory gland, mated 4-day male
3
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Moderate expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
(88)
central nervous system, larvae L3
(61)
central nervous system, pupae P8
(33)
head, virgin 1-day female
(40)
head, virgin 4-day female
22
head, virgin 20-day female
12
head, mated 1-day female
(28)
head, mated 4-day female
(27)
head, mated 20-day female
11
head, mated 1-day male
(36)
head, mated 4-day male
(38)
head, mated 20-day male
(27)
salivary gland, larvae L3 wandering
4
salivary gland, white prepupae
(207)
digestive system, larvae L3 wandering
22
digestive system, 1-day adult
18
digestive system, 4-day adult
19
digestive system, 20-day adult
11
fat body, larvae L3 wandering
8
fat body, white prepupae
20
fat body, pupae P8
20
carcass, larvae L3 wandering
(81)
carcass, 1-day adult
16
carcass, 4-day adult
15
carcass, 20-day adult
9
ovary, virgin 4-day female
15
ovary, mated 4-day female
12
testis, mated 4-day male
3
accessory gland, mated 4-day male
3
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
88
central nervous system, larvae L3
61
central nervous system, pupae P8
33
head, virgin 1-day female
40
head, virgin 4-day female
22
head, virgin 20-day female
12
head, mated 1-day female
28
head, mated 4-day female
27
head, mated 20-day female
11
head, mated 1-day male
36
head, mated 4-day male
38
head, mated 20-day male
27
salivary gland, larvae L3 wandering
4
salivary gland, white prepupae
(207)
digestive system, larvae L3 wandering
22
digestive system, 1-day adult
18
digestive system, 4-day adult
19
digestive system, 20-day adult
11
fat body, larvae L3 wandering
8
fat body, white prepupae
20
fat body, pupae P8
20
carcass, larvae L3 wandering
81
carcass, 1-day adult
16
carcass, 4-day adult
15
carcass, 20-day adult
9
ovary, virgin 4-day female
15
ovary, mated 4-day female
12
testis, mated 4-day male
3
accessory gland, mated 4-day male
3
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
88
central nervous system, larvae L3
61
central nervous system, pupae P8
33
head, virgin 1-day female
40
head, virgin 4-day female
22
head, virgin 20-day female
12
head, mated 1-day female
28
head, mated 4-day female
27
head, mated 20-day female
11
head, mated 1-day male
36
head, mated 4-day male
38
head, mated 20-day male
27
salivary gland, larvae L3 wandering
4
salivary gland, white prepupae
207
digestive system, larvae L3 wandering
22
digestive system, 1-day adult
18
digestive system, 4-day adult
19
digestive system, 20-day adult
11
fat body, larvae L3 wandering
8
fat body, white prepupae
20
fat body, pupae P8
20
carcass, larvae L3 wandering
81
carcass, 1-day adult
16
carcass, 4-day adult
15
carcass, 20-day adult
9
ovary, virgin 4-day female
15
ovary, mated 4-day female
12
testis, mated 4-day male
3
accessory gland, mated 4-day male
3
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Tissue
Expression Level
imaginal disc, larvae L3 wandering
88
central nervous system, larvae L3
61
central nervous system, pupae P8
33
head, virgin 1-day female
40
head, virgin 4-day female
22
head, virgin 20-day female
12
head, mated 1-day female
28
head, mated 4-day female
27
head, mated 20-day female
11
head, mated 1-day male
36
head, mated 4-day male
38
head, mated 20-day male
27
salivary gland, larvae L3 wandering
4
salivary gland, white prepupae
207
digestive system, larvae L3 wandering
22
digestive system, 1-day adult
18
digestive system, 4-day adult
19
digestive system, 20-day adult
11
fat body, larvae L3 wandering
8
fat body, white prepupae
20
fat body, pupae P8
20
carcass, larvae L3 wandering
81
carcass, 1-day adult
16
carcass, 4-day adult
15
carcass, 20-day adult
9
ovary, virgin 4-day female
15
ovary, mated 4-day female
12
testis, mated 4-day male
3
accessory gland, mated 4-day male
3
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
(88)
central nervous system, larvae L3
(61)
central nervous system, pupae P8
(33)
head, virgin 1-day female
(40)
head, virgin 4-day female
22
head, virgin 20-day female
12
head, mated 1-day female
28
head, mated 4-day female
27
head, mated 20-day female
11
head, mated 1-day male
(36)
head, mated 4-day male
(38)
head, mated 20-day male
27
salivary gland, larvae L3 wandering
4
salivary gland, white prepupae
(207)
digestive system, larvae L3 wandering
22
digestive system, 1-day adult
18
digestive system, 4-day adult
19
digestive system, 20-day adult
11
fat body, larvae L3 wandering
8
fat body, white prepupae
20
fat body, pupae P8
20
carcass, larvae L3 wandering
(81)
carcass, 1-day adult
16
carcass, 4-day adult
15
carcass, 20-day adult
9
ovary, virgin 4-day female
15
ovary, mated 4-day female
12
testis, mated 4-day male
3
accessory gland, mated 4-day male
3
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
88
central nervous system, larvae L3
61
central nervous system, pupae P8
33
head, virgin 1-day female
40
head, virgin 4-day female
22
head, virgin 20-day female
12
head, mated 1-day female
28
head, mated 4-day female
27
head, mated 20-day female
11
head, mated 1-day male
36
head, mated 4-day male
38
head, mated 20-day male
27
salivary gland, larvae L3 wandering
4
salivary gland, white prepupae
(207)
digestive system, larvae L3 wandering
22
digestive system, 1-day adult
18
digestive system, 4-day adult
19
digestive system, 20-day adult
11
fat body, larvae L3 wandering
8
fat body, white prepupae
20
fat body, pupae P8
20
carcass, larvae L3 wandering
81
carcass, 1-day adult
16
carcass, 4-day adult
15
carcass, 20-day adult
9
ovary, virgin 4-day female
15
ovary, mated 4-day female
12
testis, mated 4-day male
3
accessory gland, mated 4-day male
3
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
88
central nervous system, larvae L3
61
central nervous system, pupae P8
33
head, virgin 1-day female
40
head, virgin 4-day female
22
head, virgin 20-day female
12
head, mated 1-day female
28
head, mated 4-day female
27
head, mated 20-day female
11
head, mated 1-day male
36
head, mated 4-day male
38
head, mated 20-day male
27
salivary gland, larvae L3 wandering
4
salivary gland, white prepupae
207
digestive system, larvae L3 wandering
22
digestive system, 1-day adult
18
digestive system, 4-day adult
19
digestive system, 20-day adult
11
fat body, larvae L3 wandering
8
fat body, white prepupae
20
fat body, pupae P8
20
carcass, larvae L3 wandering
81
carcass, 1-day adult
16
carcass, 4-day adult
15
carcass, 20-day adult
9
ovary, virgin 4-day female
15
ovary, mated 4-day female
12
testis, mated 4-day male
3
accessory gland, mated 4-day male
3
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Tissue
Expression Level
imaginal disc, larvae L3 wandering
central nervous system, larvae L3
central nervous system, pupae P8
head, virgin 1-day female
head, virgin 4-day female
head, virgin 20-day female
head, mated 1-day female
head, mated 4-day female
head, mated 20-day female
head, mated 1-day male
head, mated 4-day male
head, mated 20-day male
salivary gland, larvae L3 wandering
salivary gland, white prepupae
digestive system, larvae L3 wandering
digestive system, 1-day adult
digestive system, 4-day adult
digestive system, 20-day adult
fat body, larvae L3 wandering
fat body, white prepupae
fat body, pupae P8
carcass, larvae L3 wandering
carcass, 1-day adult
carcass, 4-day adult
carcass, 20-day adult
ovary, virgin 4-day female
ovary, mated 4-day female
testis, mated 4-day male
accessory gland, mated 4-day male
modENCODE Development RNA-Seq
Linear, scaled to maximum expression level
Developmental Stage
Expression Level
embryo 00-02hr
43
embryo 02-04hr
159
embryo 04-06hr
326
embryo 06-08hr
276
embryo 08-10hr
280
embryo 10-12hr
276
embryo 12-14hr
192
embryo 14-16hr
117
embryo 16-18hr
79
embryo 18-20hr
51
embryo 20-22hr
44
embryo 22-24hr
46
larva L1
30
larva L2
35
larva L3 12hr old
24
larva L3 puffstage 1-2
30
larva L3 puffstage 3-6
55
larva L3 puffstage 7-9
81
white prepupae new
109
white prepupae 12hr
73
white prepupae 24hr
127
pupae 2d postWPP
66
pupae 3d postWPP
59
pupae 4d postWPP
25
adult male 01day
23
adult male 05day
15
adult male 30day
10
adult female 01day
36
adult female 05day
34
adult female 30day
31
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
(43)
embryo 02-04hr
(159)
embryo 04-06hr
(326)
embryo 06-08hr
(276)
embryo 08-10hr
(280)
embryo 10-12hr
(276)
embryo 12-14hr
(192)
embryo 14-16hr
(117)
embryo 16-18hr
(79)
embryo 18-20hr
(51)
embryo 20-22hr
(44)
embryo 22-24hr
(46)
larva L1
(30)
larva L2
(35)
larva L3 12hr old
24
larva L3 puffstage 1-2
(30)
larva L3 puffstage 3-6
(55)
larva L3 puffstage 7-9
(81)
white prepupae new
(109)
white prepupae 12hr
(73)
white prepupae 24hr
(127)
pupae 2d postWPP
(66)
pupae 3d postWPP
(59)
pupae 4d postWPP
25
adult male 01day
23
adult male 05day
15
adult male 30day
10
adult female 01day
(36)
adult female 05day
(34)
adult female 30day
(31)
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
43
embryo 02-04hr
(159)
embryo 04-06hr
(326)
embryo 06-08hr
(276)
embryo 08-10hr
(280)
embryo 10-12hr
(276)
embryo 12-14hr
(192)
embryo 14-16hr
(117)
embryo 16-18hr
79
embryo 18-20hr
51
embryo 20-22hr
44
embryo 22-24hr
46
larva L1
30
larva L2
35
larva L3 12hr old
24
larva L3 puffstage 1-2
30
larva L3 puffstage 3-6
55
larva L3 puffstage 7-9
81
white prepupae new
(109)
white prepupae 12hr
73
white prepupae 24hr
(127)
pupae 2d postWPP
66
pupae 3d postWPP
59
pupae 4d postWPP
25
adult male 01day
23
adult male 05day
15
adult male 30day
10
adult female 01day
36
adult female 05day
34
adult female 30day
31
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
43
embryo 02-04hr
159
embryo 04-06hr
326
embryo 06-08hr
276
embryo 08-10hr
280
embryo 10-12hr
276
embryo 12-14hr
192
embryo 14-16hr
117
embryo 16-18hr
79
embryo 18-20hr
51
embryo 20-22hr
44
embryo 22-24hr
46
larva L1
30
larva L2
35
larva L3 12hr old
24
larva L3 puffstage 1-2
30
larva L3 puffstage 3-6
55
larva L3 puffstage 7-9
81
white prepupae new
109
white prepupae 12hr
73
white prepupae 24hr
127
pupae 2d postWPP
66
pupae 3d postWPP
59
pupae 4d postWPP
25
adult male 01day
23
adult male 05day
15
adult male 30day
10
adult female 01day
36
adult female 05day
34
adult female 30day
31
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Developmental Stage
Expression Level
embryo 00-02hr
43
embryo 02-04hr
159
embryo 04-06hr
326
embryo 06-08hr
276
embryo 08-10hr
280
embryo 10-12hr
276
embryo 12-14hr
192
embryo 14-16hr
117
embryo 16-18hr
79
embryo 18-20hr
51
embryo 20-22hr
44
embryo 22-24hr
46
larva L1
30
larva L2
35
larva L3 12hr old
24
larva L3 puffstage 1-2
30
larva L3 puffstage 3-6
55
larva L3 puffstage 7-9
81
white prepupae new
109
white prepupae 12hr
73
white prepupae 24hr
127
pupae 2d postWPP
66
pupae 3d postWPP
59
pupae 4d postWPP
25
adult male 01day
23
adult male 05day
15
adult male 30day
10
adult female 01day
36
adult female 05day
34
adult female 30day
31
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
(43)
embryo 02-04hr
(159)
embryo 04-06hr
(326)
embryo 06-08hr
(276)
embryo 08-10hr
(280)
embryo 10-12hr
(276)
embryo 12-14hr
(192)
embryo 14-16hr
(117)
embryo 16-18hr
(79)
embryo 18-20hr
(51)
embryo 20-22hr
(44)
embryo 22-24hr
(46)
larva L1
30
larva L2
(35)
larva L3 12hr old
24
larva L3 puffstage 1-2
30
larva L3 puffstage 3-6
(55)
larva L3 puffstage 7-9
(81)
white prepupae new
(109)
white prepupae 12hr
(73)
white prepupae 24hr
(127)
pupae 2d postWPP
(66)
pupae 3d postWPP
(59)
pupae 4d postWPP
25
adult male 01day
23
adult male 05day
15
adult male 30day
10
adult female 01day
(36)
adult female 05day
(34)
adult female 30day
31
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
43
embryo 02-04hr
(159)
embryo 04-06hr
(326)
embryo 06-08hr
(276)
embryo 08-10hr
(280)
embryo 10-12hr
(276)
embryo 12-14hr
(192)
embryo 14-16hr
117
embryo 16-18hr
79
embryo 18-20hr
51
embryo 20-22hr
44
embryo 22-24hr
46
larva L1
30
larva L2
35
larva L3 12hr old
24
larva L3 puffstage 1-2
30
larva L3 puffstage 3-6
55
larva L3 puffstage 7-9
81
white prepupae new
109
white prepupae 12hr
73
white prepupae 24hr
127
pupae 2d postWPP
66
pupae 3d postWPP
59
pupae 4d postWPP
25
adult male 01day
23
adult male 05day
15
adult male 30day
10
adult female 01day
36
adult female 05day
34
adult female 30day
31
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
43
embryo 02-04hr
159
embryo 04-06hr
326
embryo 06-08hr
276
embryo 08-10hr
280
embryo 10-12hr
276
embryo 12-14hr
192
embryo 14-16hr
117
embryo 16-18hr
79
embryo 18-20hr
51
embryo 20-22hr
44
embryo 22-24hr
46
larva L1
30
larva L2
35
larva L3 12hr old
24
larva L3 puffstage 1-2
30
larva L3 puffstage 3-6
55
larva L3 puffstage 7-9
81
white prepupae new
109
white prepupae 12hr
73
white prepupae 24hr
127
pupae 2d postWPP
66
pupae 3d postWPP
59
pupae 4d postWPP
25
adult male 01day
23
adult male 05day
15
adult male 30day
10
adult female 01day
36
adult female 05day
34
adult female 30day
31
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Developmental Stage
Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day
modENCODE Cell Lines RNA-Seq
Linear, scaled to maximum expression level
Cell Line
Expression Level
Schneider line 2 S2R+
8
Schneider line 2 Sg4
14
embryonic 1182-4H
1
embryonic GM2
21
embryonic Kc167
2
embryonic S1
8
embryonic S3
59
leg disc CME L1
9
wing disc CME-W2
16
wing disc ML-DmD8
21
wing disc ML-DmD9
24
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
30
wing disc ML-DmD32
14
haltere disc ML-DmD17-c3
86
eye-antennal disc ML-DmD11
3
antennal disc ML-DmD20-c5
1
mixed discs ML-DmD4-c1
5
CNS ML-DmBG1-c1
2
CNS ML-DmBG2-c2
4
tumorous blood cells mbn2
2
ovary fGS/OSS
29
ovary OSC
36
ovary OSS
53
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Linear, scaled to Moderate expression
Cell Line
Expression Level
Schneider line 2 S2R+
8
Schneider line 2 Sg4
14
embryonic 1182-4H
1
embryonic GM2
21
embryonic Kc167
2
embryonic S1
8
embryonic S3
(59)
leg disc CME L1
9
wing disc CME-W2
16
wing disc ML-DmD8
21
wing disc ML-DmD9
24
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
(30)
wing disc ML-DmD32
14
haltere disc ML-DmD17-c3
(86)
eye-antennal disc ML-DmD11
3
antennal disc ML-DmD20-c5
1
mixed discs ML-DmD4-c1
5
CNS ML-DmBG1-c1
2
CNS ML-DmBG2-c2
4
tumorous blood cells mbn2
2
ovary fGS/OSS
(29)
ovary OSC
(36)
ovary OSS
(53)
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Cell Line
Expression Level
Schneider line 2 S2R+
8
Schneider line 2 Sg4
14
embryonic 1182-4H
1
embryonic GM2
21
embryonic Kc167
2
embryonic S1
8
embryonic S3
59
leg disc CME L1
9
wing disc CME-W2
16
wing disc ML-DmD8
21
wing disc ML-DmD9
24
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
30
wing disc ML-DmD32
14
haltere disc ML-DmD17-c3
86
eye-antennal disc ML-DmD11
3
antennal disc ML-DmD20-c5
1
mixed discs ML-DmD4-c1
5
CNS ML-DmBG1-c1
2
CNS ML-DmBG2-c2
4
tumorous blood cells mbn2
2
ovary fGS/OSS
29
ovary OSC
36
ovary OSS
53
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Cell Line
Expression Level
Schneider line 2 S2R+
8
Schneider line 2 Sg4
14
embryonic 1182-4H
1
embryonic GM2
21
embryonic Kc167
2
embryonic S1
8
embryonic S3
59
leg disc CME L1
9
wing disc CME-W2
16
wing disc ML-DmD8
21
wing disc ML-DmD9
24
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
30
wing disc ML-DmD32
14
haltere disc ML-DmD17-c3
86
eye-antennal disc ML-DmD11
3
antennal disc ML-DmD20-c5
1
mixed discs ML-DmD4-c1
5
CNS ML-DmBG1-c1
2
CNS ML-DmBG2-c2
4
tumorous blood cells mbn2
2
ovary fGS/OSS
29
ovary OSC
36
ovary OSS
53
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Cell Line
Expression Level
Schneider line 2 S2R+
8
Schneider line 2 Sg4
14
embryonic 1182-4H
1
embryonic GM2
21
embryonic Kc167
2
embryonic S1
8
embryonic S3
59
leg disc CME L1
9
wing disc CME-W2
16
wing disc ML-DmD8
21
wing disc ML-DmD9
24
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
30
wing disc ML-DmD32
14
haltere disc ML-DmD17-c3
86
eye-antennal disc ML-DmD11
3
antennal disc ML-DmD20-c5
1
mixed discs ML-DmD4-c1
5
CNS ML-DmBG1-c1
2
CNS ML-DmBG2-c2
4
tumorous blood cells mbn2
2
ovary fGS/OSS
29
ovary OSC
36
ovary OSS
53
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Cell Line
Expression Level
Schneider line 2 S2R+
8
Schneider line 2 Sg4
14
embryonic 1182-4H
1
embryonic GM2
21
embryonic Kc167
2
embryonic S1
8
embryonic S3
(59)
leg disc CME L1
9
wing disc CME-W2
16
wing disc ML-DmD8
21
wing disc ML-DmD9
24
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
30
wing disc ML-DmD32
14
haltere disc ML-DmD17-c3
(86)
eye-antennal disc ML-DmD11
3
antennal disc ML-DmD20-c5
1
mixed discs ML-DmD4-c1
5
CNS ML-DmBG1-c1
2
CNS ML-DmBG2-c2
4
tumorous blood cells mbn2
2
ovary fGS/OSS
29
ovary OSC
(36)
ovary OSS
(53)
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Cell Line
Expression Level
Schneider line 2 S2R+
8
Schneider line 2 Sg4
14
embryonic 1182-4H
1
embryonic GM2
21
embryonic Kc167
2
embryonic S1
8
embryonic S3
59
leg disc CME L1
9
wing disc CME-W2
16
wing disc ML-DmD8
21
wing disc ML-DmD9
24
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
30
wing disc ML-DmD32
14
haltere disc ML-DmD17-c3
86
eye-antennal disc ML-DmD11
3
antennal disc ML-DmD20-c5
1
mixed discs ML-DmD4-c1
5
CNS ML-DmBG1-c1
2
CNS ML-DmBG2-c2
4
tumorous blood cells mbn2
2
ovary fGS/OSS
29
ovary OSC
36
ovary OSS
53
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Cell Line
Expression Level
Schneider line 2 S2R+
8
Schneider line 2 Sg4
14
embryonic 1182-4H
1
embryonic GM2
21
embryonic Kc167
2
embryonic S1
8
embryonic S3
59
leg disc CME L1
9
wing disc CME-W2
16
wing disc ML-DmD8
21
wing disc ML-DmD9
24
wing disc ML-DmD16-c3
3
wing disc ML-DmD21
30
wing disc ML-DmD32
14
haltere disc ML-DmD17-c3
86
eye-antennal disc ML-DmD11
3
antennal disc ML-DmD20-c5
1
mixed discs ML-DmD4-c1
5
CNS ML-DmBG1-c1
2
CNS ML-DmBG2-c2
4
tumorous blood cells mbn2
2
ovary fGS/OSS
29
ovary OSC
36
ovary OSS
53
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Cell Line
Expression Level
Schneider line 2 S2R+
Schneider line 2 Sg4
embryonic 1182-4H
embryonic GM2
embryonic Kc167
embryonic S1
embryonic S3
leg disc CME L1
wing disc CME-W2
wing disc ML-DmD8
wing disc ML-DmD9
wing disc ML-DmD16-c3
wing disc ML-DmD21
wing disc ML-DmD32
haltere disc ML-DmD17-c3
eye-antennal disc ML-DmD11
antennal disc ML-DmD20-c5
mixed discs ML-DmD4-c1
CNS ML-DmBG1-c1
CNS ML-DmBG2-c2
tumorous blood cells mbn2
ovary fGS/OSS
ovary OSC
ovary OSS
modENCODE Treatments RNA-Seq
Linear, scaled to maximum expression level
Treatment
Expression Level
extended cold, 4-day adult
14
cold shock, 4-day adult
13
heat shock, 4-day adult
19
Cadmium 50 mM 6 hrs, larvae L3
21
Cadmium 50 mM 12 hrs, larvae L3
42
Cadmium 50 mM 48 hrs, 4-day adult
19
Cadmium 100 mM 48 hrs, 4-day adult
11
Copper 0.5 mM 12 hrs, larvae L3
22
Copper 15 mM 48 hrs, 4-day adult
25
Zinc 5 mM 12 hrs, larvae L3
18
Zinc 4.5 mM 48 hrs, 4-day adult
23
Ethanol 2.5% 3 hrs, larvae L3
8
Ethanol 5% 3 hrs, larvae L3
26
Ethanol 10% 3 hrs, larvae L3
21
Caffeine 1.5 mg/ml 4 hrs, larvae L3
20
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
9
Caffeine 25 mg/ml 48 hrs, 4-day adult
11
Paraquat 5 mM 48 hrs, 4-day adult
9
Paraquat 10 mM 48 hrs, 4-day adult
11
Rotenone 2 μg 12 hrs, larvae L3
27
Rotenone 8 μg 12 hrs, larvae L3
13
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to Moderate expression
Treatment
Expression Level
extended cold, 4-day adult
14
cold shock, 4-day adult
13
heat shock, 4-day adult
19
Cadmium 50 mM 6 hrs, larvae L3
21
Cadmium 50 mM 12 hrs, larvae L3
(42)
Cadmium 50 mM 48 hrs, 4-day adult
19
Cadmium 100 mM 48 hrs, 4-day adult
11
Copper 0.5 mM 12 hrs, larvae L3
22
Copper 15 mM 48 hrs, 4-day adult
25
Zinc 5 mM 12 hrs, larvae L3
18
Zinc 4.5 mM 48 hrs, 4-day adult
23
Ethanol 2.5% 3 hrs, larvae L3
8
Ethanol 5% 3 hrs, larvae L3
26
Ethanol 10% 3 hrs, larvae L3
21
Caffeine 1.5 mg/ml 4 hrs, larvae L3
20
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
9
Caffeine 25 mg/ml 48 hrs, 4-day adult
11
Paraquat 5 mM 48 hrs, 4-day adult
9
Paraquat 10 mM 48 hrs, 4-day adult
11
Rotenone 2 μg 12 hrs, larvae L3
(27)
Rotenone 8 μg 12 hrs, larvae L3
13
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Treatment
Expression Level
extended cold, 4-day adult
14
cold shock, 4-day adult
13
heat shock, 4-day adult
19
Cadmium 50 mM 6 hrs, larvae L3
21
Cadmium 50 mM 12 hrs, larvae L3
42
Cadmium 50 mM 48 hrs, 4-day adult
19
Cadmium 100 mM 48 hrs, 4-day adult
11
Copper 0.5 mM 12 hrs, larvae L3
22
Copper 15 mM 48 hrs, 4-day adult
25
Zinc 5 mM 12 hrs, larvae L3
18
Zinc 4.5 mM 48 hrs, 4-day adult
23
Ethanol 2.5% 3 hrs, larvae L3
8
Ethanol 5% 3 hrs, larvae L3
26
Ethanol 10% 3 hrs, larvae L3
21
Caffeine 1.5 mg/ml 4 hrs, larvae L3
20
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
9
Caffeine 25 mg/ml 48 hrs, 4-day adult
11
Paraquat 5 mM 48 hrs, 4-day adult
9
Paraquat 10 mM 48 hrs, 4-day adult
11
Rotenone 2 μg 12 hrs, larvae L3
27
Rotenone 8 μg 12 hrs, larvae L3
13
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Treatment
Expression Level
extended cold, 4-day adult
14
cold shock, 4-day adult
13
heat shock, 4-day adult
19
Cadmium 50 mM 6 hrs, larvae L3
21
Cadmium 50 mM 12 hrs, larvae L3
42
Cadmium 50 mM 48 hrs, 4-day adult
19
Cadmium 100 mM 48 hrs, 4-day adult
11
Copper 0.5 mM 12 hrs, larvae L3
22
Copper 15 mM 48 hrs, 4-day adult
25
Zinc 5 mM 12 hrs, larvae L3
18
Zinc 4.5 mM 48 hrs, 4-day adult
23
Ethanol 2.5% 3 hrs, larvae L3
8
Ethanol 5% 3 hrs, larvae L3
26
Ethanol 10% 3 hrs, larvae L3
21
Caffeine 1.5 mg/ml 4 hrs, larvae L3
20
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
9
Caffeine 25 mg/ml 48 hrs, 4-day adult
11
Paraquat 5 mM 48 hrs, 4-day adult
9
Paraquat 10 mM 48 hrs, 4-day adult
11
Rotenone 2 μg 12 hrs, larvae L3
27
Rotenone 8 μg 12 hrs, larvae L3
13
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Treatment
Expression Level
extended cold, 4-day adult
14
cold shock, 4-day adult
13
heat shock, 4-day adult
19
Cadmium 50 mM 6 hrs, larvae L3
21
Cadmium 50 mM 12 hrs, larvae L3
42
Cadmium 50 mM 48 hrs, 4-day adult
19
Cadmium 100 mM 48 hrs, 4-day adult
11
Copper 0.5 mM 12 hrs, larvae L3
22
Copper 15 mM 48 hrs, 4-day adult
25
Zinc 5 mM 12 hrs, larvae L3
18
Zinc 4.5 mM 48 hrs, 4-day adult
23
Ethanol 2.5% 3 hrs, larvae L3
8
Ethanol 5% 3 hrs, larvae L3
26
Ethanol 10% 3 hrs, larvae L3
21
Caffeine 1.5 mg/ml 4 hrs, larvae L3
20
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
9
Caffeine 25 mg/ml 48 hrs, 4-day adult
11
Paraquat 5 mM 48 hrs, 4-day adult
9
Paraquat 10 mM 48 hrs, 4-day adult
11
Rotenone 2 μg 12 hrs, larvae L3
27
Rotenone 8 μg 12 hrs, larvae L3
13
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
log, scaled to Moderate expression
Treatment
Expression Level
extended cold, 4-day adult
14
cold shock, 4-day adult
13
heat shock, 4-day adult
19
Cadmium 50 mM 6 hrs, larvae L3
21
Cadmium 50 mM 12 hrs, larvae L3
(42)
Cadmium 50 mM 48 hrs, 4-day adult
19
Cadmium 100 mM 48 hrs, 4-day adult
11
Copper 0.5 mM 12 hrs, larvae L3
22
Copper 15 mM 48 hrs, 4-day adult
25
Zinc 5 mM 12 hrs, larvae L3
18
Zinc 4.5 mM 48 hrs, 4-day adult
23
Ethanol 2.5% 3 hrs, larvae L3
8
Ethanol 5% 3 hrs, larvae L3
26
Ethanol 10% 3 hrs, larvae L3
21
Caffeine 1.5 mg/ml 4 hrs, larvae L3
20
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
9
Caffeine 25 mg/ml 48 hrs, 4-day adult
11
Paraquat 5 mM 48 hrs, 4-day adult
9
Paraquat 10 mM 48 hrs, 4-day adult
11
Rotenone 2 μg 12 hrs, larvae L3
27
Rotenone 8 μg 12 hrs, larvae L3
13
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Treatment
Expression Level
extended cold, 4-day adult
14
cold shock, 4-day adult
13
heat shock, 4-day adult
19
Cadmium 50 mM 6 hrs, larvae L3
21
Cadmium 50 mM 12 hrs, larvae L3
42
Cadmium 50 mM 48 hrs, 4-day adult
19
Cadmium 100 mM 48 hrs, 4-day adult
11
Copper 0.5 mM 12 hrs, larvae L3
22
Copper 15 mM 48 hrs, 4-day adult
25
Zinc 5 mM 12 hrs, larvae L3
18
Zinc 4.5 mM 48 hrs, 4-day adult
23
Ethanol 2.5% 3 hrs, larvae L3
8
Ethanol 5% 3 hrs, larvae L3
26
Ethanol 10% 3 hrs, larvae L3
21
Caffeine 1.5 mg/ml 4 hrs, larvae L3
20
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
9
Caffeine 25 mg/ml 48 hrs, 4-day adult
11
Paraquat 5 mM 48 hrs, 4-day adult
9
Paraquat 10 mM 48 hrs, 4-day adult
11
Rotenone 2 μg 12 hrs, larvae L3
27
Rotenone 8 μg 12 hrs, larvae L3
13
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Treatment
Expression Level
extended cold, 4-day adult
14
cold shock, 4-day adult
13
heat shock, 4-day adult
19
Cadmium 50 mM 6 hrs, larvae L3
21
Cadmium 50 mM 12 hrs, larvae L3
42
Cadmium 50 mM 48 hrs, 4-day adult
19
Cadmium 100 mM 48 hrs, 4-day adult
11
Copper 0.5 mM 12 hrs, larvae L3
22
Copper 15 mM 48 hrs, 4-day adult
25
Zinc 5 mM 12 hrs, larvae L3
18
Zinc 4.5 mM 48 hrs, 4-day adult
23
Ethanol 2.5% 3 hrs, larvae L3
8
Ethanol 5% 3 hrs, larvae L3
26
Ethanol 10% 3 hrs, larvae L3
21
Caffeine 1.5 mg/ml 4 hrs, larvae L3
20
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
9
Caffeine 25 mg/ml 48 hrs, 4-day adult
11
Paraquat 5 mM 48 hrs, 4-day adult
9
Paraquat 10 mM 48 hrs, 4-day adult
11
Rotenone 2 μg 12 hrs, larvae L3
27
Rotenone 8 μg 12 hrs, larvae L3
13
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Treatment
Expression Level
extended cold, 4-day adult
cold shock, 4-day adult
heat shock, 4-day adult
Cadmium 50 mM 6 hrs, larvae L3
Cadmium 50 mM 12 hrs, larvae L3
Cadmium 50 mM 48 hrs, 4-day adult
Cadmium 100 mM 48 hrs, 4-day adult
Copper 0.5 mM 12 hrs, larvae L3
Copper 15 mM 48 hrs, 4-day adult
Zinc 5 mM 12 hrs, larvae L3
Zinc 4.5 mM 48 hrs, 4-day adult
Ethanol 2.5% 3 hrs, larvae L3
Ethanol 5% 3 hrs, larvae L3
Ethanol 10% 3 hrs, larvae L3
Caffeine 1.5 mg/ml 4 hrs, larvae L3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
Caffeine 25 mg/ml 48 hrs, 4-day adult
Paraquat 5 mM 48 hrs, 4-day adult
Paraquat 10 mM 48 hrs, 4-day adult
Rotenone 2 μg 12 hrs, larvae L3
Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
External Data & Images
Linkouts
- Cell culture data for RNAi and other high-throughput technologies
- Adult expression by tissue, using Affymetrix Dros2 array
Alleles & Phenotypes Summary of Allele Phenotypes Classical Alleles ( 34 ) For All Classical Alleles Show Alleles Carried on Transgenic Constructs
( 10 ) For All Alleles Carried on Transgenic
Constructs Show Aneuploid Aberrations Disrupted in Duplicated in Transgenic Constructs & Insertions
Transgenic Constructs Insertions insertion of mobile activating element
insertion of enhancer trap binary system
No
No
No
No
No
No
No
No
No
No
No
No
No
No
No
insertion of enhancer trap
No
No
No
No
No
No
No
No
No
No
No
No
No
No
No
No
Gene Ontology: Function, Process
& Cellular Component ( 11 unique terms ) Terms Based on
Experimental Evidence ( 11 terms ) Molecular Function inferred from direct assay
Biological Process inferred from direct assay
inferred from mutant phenotype
inferred from mutant phenotype
inferred from mutant phenotype
inferred from direct assay
inferred from mutant phenotype
inferred from mutant phenotype
Cellular Component inferred from direct assay
inferred from direct assay
inferred from direct assay
inferred from direct assay
(assigned by UniProtKB)
Terms Based on Predictions or
Assertions ( 2 terms ) Molecular Function Biological Process ( 0 terms) Cellular Component inferred from sequence or structural similarity with
EMBL:AF115854 Sequence Ontology: Class of Gene Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions Interacts with Please look at the allele data
for full details of the genetic interactions
External Data Linkouts
- A database of protein and genetic interactions
- A comprehensive database of gene and protein interactions.
Protein-protein interactions (PPI) from both known and predicted PPI data sets.
Orthologs
OrthoDB Orthologs (42)
- based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
OrthoDB orthology group searches
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
Orthologs in Drosophila Species
(EOG6ZCTQH )
Drosophila melanogaster
fruit fly
Drosophila pseudoobscura pseudoobscura
Y
Orthologs in non-Drosophila Dipterans
(EOG6TXC1J )
Aedes aegypti
Yellow fever mosquito
Anopheles gambiae
Malaria mosquito
Culex quinquefasciatus
Southern house mosquito
Orthologs in non-Dipteran Insects
(EOG64B8XV )
Apis mellifera
Western honey bee
Amel\inx2
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG015812
Acromyrmex echinatior
Panamanian leafcutter ant
Aech\AECH16154
Atta cephalotes
Leafcutter ant
Acep\ACEP18357
Camponotus floridanus
Florida carpenter ant
Cflo\CFLO16607
Harpegnathos saltator
Jerdons jumping ant
Hsal\HSAL12400
Linepithema humile
Argentine ant
Lhum\LH12525
Pogonomyrmex barbatus
Red harvester ant
Pbar\PB21401
Solenopsis invicta
Red fire ant
Sinv\SINV20567
Solenopsis invicta
Red fire ant
Sinv\SINV18118
Acyrthosiphon pisum
Pea aphid
Pediculus humanus
Human body louse
Tribolium castaneum
Red flour beetle
Orthologs in non-Insect Arthropods
(EOG60VT55 )
Ixodes scapularis
Deer tick
Ixodes scapularis
Deer tick
Ixodes scapularis
Deer tick
Orthologs in non-Arthropod Metazoa
(EOG65XMPR )
Caenorhabditis elegans
Nematode
Y
Caenorhabditis elegans
Nematode
Y
Caenorhabditis elegans
Nematode
Y
Caenorhabditis elegans
Nematode
Y
Caenorhabditis elegans
Nematode
Y
Caenorhabditis elegans
Nematode
Y
Caenorhabditis elegans
Nematode
Y
Caenorhabditis elegans
Nematode
Y
Human Orthologs (0)AAA Orthologs (11)
based on analysis using Dmel annotation version 4.3
Drosophila pseudoobscura pseudoobscura
Stocks & Reagents Stocks Listed in FlyBase ( 20 )Bloomington Kyoto VDRC Genomic Clones ( 1 )Please Note FlyBase no
longer curates genomic clone accessions so this list
may not be complete
cDNA Clones ( 521 )Please Note This section lists
cDNAs and ESTs that fall within the genomic extent
of the gene model, which may include cDNAs and ESTs
of genes within introns, or of overlapping genes.
Please see
GBrowse for alignment of the cDNAs and ESTs
to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones Other clones cDNA Clones, End Sequenced
(ESTs) BDGP DGC clones Other clones RNAi & Array Information Linkouts
- Results from RNAi screens.
- GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
Antibody Information
Other Information Discoverer Etymology Identification Relationship to Other Genes Source for database identity of Source for identity of: Inx2 inx2
Source for database merge of Source for merge of: inx2 l(1)G0036
Source for merge of: inx2 l(1)G0036 l(1)G0317 l(1)G0035 l(1)G0157 l(1)G0059 l(1)G0118 l(1)G0043 l(1)G0364
Additional comments "l(1)G0011" may affect "inx2".
Other Comments inx2 is required for the normal formation of the keyhole, a primordial structure of the proventriculus.
External Crossreferences & Linkouts
Sequence Crossreferences
- A searchable database of RefSeq genes.
Other Crossreferences
domains - A database of protein families, domains, and functional sites
- Patterns of gene expression in Drosophila embryogenesis
Linkouts
- A database of protein and genetic interactions
- A comprehensive database of gene and protein interactions.
- Results from RNAi screens.
- Cell culture data for RNAi and other high-throughput technologies
- Adult expression by tissue, using Affymetrix Dros2 array
- Integrated genomics database for Drosophila, Anopheles, and C.elegans
- GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
Protein-protein interactions (PPI) from both known and predicted PPI data sets.
- Data generated by the modENCODE project.
Synonyms & Secondary IDs
( 26 )Reported As Symbol Synonym CG4590
(
Bourbon et al., 2002 ,
Quinones-Coello, 2007 ,
Keleman et al., 2009.8.5 ,
Perkins et al., 2009 ,
Cammarato et al., 2011 ,
Ni et al., 2010.12.1 ,
Tsubouchi et al., 2012 )
inx2
(
Mukai et al., 2011 ,
Tsubouchi et al., 2012 ,
Reiter et al., 2007 ,
Lehmann et al., 2006 ,
Quinones-Coello, 2007 ,
Lechner et al., 2007 ,
Quijano et al., 2008 ,
Popodi et al., 2010- ,
Wu et al., 2011 ,
Ayukawa et al., 2012 )
Name Synonym innexin 2
(
Cammarato et al., 2011 ,
Tsubouchi et al., 2012 ,
Sambandan et al., 2008 ,
Bauer et al., 2003 ,
Goulding et al., 2004 ,
Ostrowski et al., 2005 ,
Sambandan et al., 2006 ,
Bohrmann and Zimmermann, 2008 )
Secondary FlyBase
IDs FBgn0026672 FBgn0026693 FBgn0026703 FBgn0026707 FBgn0027220 FBgn0027325 FBgn0028356 FBgn0029062 References ( 69 )Generate a list of List References by type
Recent research papers ( 3 )
Ayukawa et al., 2012, Proc. Natl. Acad. Sci. U.S.A. 109(38): 15318--15323Rescue of Notch signaling in cells incapable of GDP-L-fucose synthesis by gap junction transfer of GDP-L-fucose in Drosophila. [FBrf0219480] Mukai et al., 2011, Mech. Dev. 128(7-10): 510--523Innexin2 gap junctions in somatic support cells are required for cyst formation and for egg chamber formation in Drosophila. [FBrf0216750] Wu et al., 2011, Curr. Biol. 21(10): 848--854Heterotypic Gap Junctions between Two Neurons in the Drosophila Brain Are Critical for Memory. [FBrf0213804]
Recent reviews ( 1 )
Abascal and Zardoya, 2013, Biochim. Biophys. Acta 1828(1): 4--14Evolutionary analyses of gap junction protein families. [FBrf0219962]