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Gene Dmel\Tim8

General Information
Symbol	Dmel\Tim8	Species	D. melanogaster
Name	Tim8	Annotation symbol	CG1728
Feature type	protein_coding_gene	FlyBase ID	FBgn0027359
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	10B6-10B6	Sequence location	X:11,262,464..11,263,216 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Tim8 is referred to in FlyBase by the symbol Dmel\Tim8 (CG1728, FBgn0027359). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity. Based on sequence similarity, it is predicted to be involved in the biological process: protein targeting to mitochondrion; protein transport. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed during early larval stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult central nervous system, larval fat body, larval/adult salivary gland, larval trachea, adult ovary, adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, adult spermathecae, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1637967_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of Tim8. Gene sequence location is X:11262464..11263216.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN28530 HFA20291
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 10B6-10B6   Limits computationally determined from genome sequence between P{EP}CG11756EP1610 and P{EP}CG32666EP1452
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Tim8 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.40
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Tim8-RA FBtr0073482  NM_132485   675   88
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Tim8-PA   FBpp0073338   10.1   88   4.80     NP_572713   AAF48036
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like (IPR004217) MitoDrome - A database of annotated Dmel nuclear genes encoding mitochondrial proteins • MTDROME01728
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014298 AAF48036   AF142424   AI534085   AI944577   AI945835   AY118649 AAM50018   BF503878   BI353780   BP542344   BP545146   BP545147   BP546078   BP550989   BP552497   BP552498   CO270378   CO286551   CO290457   CO290496   CO292546   CO292989   CO302870   EC068884   EC079812   EC085933   EC086640   EC195319   EC197214   EC202091   EC207820   EC229601   EC235603   EC242281   EV581893
UniProtKB/Swiss-Prot	Q9Y1A3
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0027359    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0027359 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed during early larval stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0027359 expression level Developmental Stage   Expression Level embryo 00-02hr    8506 embryo 02-04hr    2201 embryo 04-06hr    3831 embryo 06-08hr    4043 embryo 08-10hr    5121 embryo 10-12hr    6722 embryo 12-14hr    5781 embryo 14-16hr    6491 embryo 16-18hr    7254 embryo 18-20hr    5552 embryo 20-22hr    5190 embryo 22-24hr    4765 larva L1    10923 larva L2    10488 larva L3 12hr old    7020 larva L3 puffstage 1-2    2994 larva L3 puffstage 3-6    2986 larva L3 puffstage 7-9    3560 white prepupae new    3316 white prepupae 12hr    2731 white prepupae 24hr    3932 pupae 2d postWPP    5747 pupae 3d postWPP    6428 pupae 4d postWPP    5004 adult male 01day    5717 adult male 05day    6544 adult male 30day    5911 adult female 01day    6002 adult female 05day    7446 adult female 30day    7946 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (8506) embryo 02-04hr  (2201) embryo 04-06hr  (3831) embryo 06-08hr  (4043) embryo 08-10hr  (5121) embryo 10-12hr  (6722) embryo 12-14hr  (5781) embryo 14-16hr  (6491) embryo 16-18hr  (7254) embryo 18-20hr  (5552) embryo 20-22hr  (5190) embryo 22-24hr  (4765) larva L1  (10923) larva L2  (10488) larva L3 12hr old  (7020) larva L3 puffstage 1-2  (2994) larva L3 puffstage 3-6  (2986) larva L3 puffstage 7-9  (3560) white prepupae new  (3316) white prepupae 12hr  (2731) white prepupae 24hr  (3932) pupae 2d postWPP  (5747) pupae 3d postWPP  (6428) pupae 4d postWPP  (5004) adult male 01day  (5717) adult male 05day  (6544) adult male 30day  (5911) adult female 01day  (6002) adult female 05day  (7446) adult female 30day  (7946) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (8506) embryo 02-04hr  (2201) embryo 04-06hr  (3831) embryo 06-08hr  (4043) embryo 08-10hr  (5121) embryo 10-12hr  (6722) embryo 12-14hr  (5781) embryo 14-16hr  (6491) embryo 16-18hr  (7254) embryo 18-20hr  (5552) embryo 20-22hr  (5190) embryo 22-24hr  (4765) larva L1  (10923) larva L2  (10488) larva L3 12hr old  (7020) larva L3 puffstage 1-2  (2994) larva L3 puffstage 3-6  (2986) larva L3 puffstage 7-9  (3560) white prepupae new  (3316) white prepupae 12hr  (2731) white prepupae 24hr  (3932) pupae 2d postWPP  (5747) pupae 3d postWPP  (6428) pupae 4d postWPP  (5004) adult male 01day  (5717) adult male 05day  (6544) adult male 30day  (5911) adult female 01day  (6002) adult female 05day  (7446) adult female 30day  (7946) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    8506 embryo 02-04hr    2201 embryo 04-06hr    3831 embryo 06-08hr    4043 embryo 08-10hr    5121 embryo 10-12hr    6722 embryo 12-14hr    5781 embryo 14-16hr    6491 embryo 16-18hr    7254 embryo 18-20hr    5552 embryo 20-22hr    5190 embryo 22-24hr    4765 larva L1  (10923) larva L2  10488 larva L3 12hr old    7020 larva L3 puffstage 1-2    2994 larva L3 puffstage 3-6    2986 larva L3 puffstage 7-9    3560 white prepupae new    3316 white prepupae 12hr    2731 white prepupae 24hr    3932 pupae 2d postWPP    5747 pupae 3d postWPP    6428 pupae 4d postWPP    5004 adult male 01day    5717 adult male 05day    6544 adult male 30day    5911 adult female 01day    6002 adult female 05day    7446 adult female 30day    7946 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    8506 embryo 02-04hr    2201 embryo 04-06hr    3831 embryo 06-08hr    4043 embryo 08-10hr    5121 embryo 10-12hr    6722 embryo 12-14hr    5781 embryo 14-16hr    6491 embryo 16-18hr    7254 embryo 18-20hr    5552 embryo 20-22hr    5190 embryo 22-24hr    4765 larva L1    10923 larva L2    10488 larva L3 12hr old    7020 larva L3 puffstage 1-2    2994 larva L3 puffstage 3-6    2986 larva L3 puffstage 7-9    3560 white prepupae new    3316 white prepupae 12hr    2731 white prepupae 24hr    3932 pupae 2d postWPP    5747 pupae 3d postWPP    6428 pupae 4d postWPP    5004 adult male 01day    5717 adult male 05day    6544 adult male 30day    5911 adult female 01day    6002 adult female 05day    7446 adult female 30day    7946 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0027359 expression level Developmental Stage   Expression Level embryo 00-02hr    8506 embryo 02-04hr    2201 embryo 04-06hr    3831 embryo 06-08hr    4043 embryo 08-10hr    5121 embryo 10-12hr    6722 embryo 12-14hr    5781 embryo 14-16hr    6491 embryo 16-18hr    7254 embryo 18-20hr    5552 embryo 20-22hr    5190 embryo 22-24hr    4765 larva L1    10923 larva L2    10488 larva L3 12hr old    7020 larva L3 puffstage 1-2    2994 larva L3 puffstage 3-6    2986 larva L3 puffstage 7-9    3560 white prepupae new    3316 white prepupae 12hr    2731 white prepupae 24hr    3932 pupae 2d postWPP    5747 pupae 3d postWPP    6428 pupae 4d postWPP    5004 adult male 01day    5717 adult male 05day    6544 adult male 30day    5911 adult female 01day    6002 adult female 05day    7446 adult female 30day    7946 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (8506) embryo 02-04hr  (2201) embryo 04-06hr  (3831) embryo 06-08hr  (4043) embryo 08-10hr  (5121) embryo 10-12hr  (6722) embryo 12-14hr  (5781) embryo 14-16hr  (6491) embryo 16-18hr  (7254) embryo 18-20hr  (5552) embryo 20-22hr  (5190) embryo 22-24hr  (4765) larva L1  (10923) larva L2  (10488) larva L3 12hr old  (7020) larva L3 puffstage 1-2  (2994) larva L3 puffstage 3-6  (2986) larva L3 puffstage 7-9  (3560) white prepupae new  (3316) white prepupae 12hr  (2731) white prepupae 24hr  (3932) pupae 2d postWPP  (5747) pupae 3d postWPP  (6428) pupae 4d postWPP  (5004) adult male 01day  (5717) adult male 05day  (6544) adult male 30day  (5911) adult female 01day  (6002) adult female 05day  (7446) adult female 30day  (7946) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (8506) embryo 02-04hr  2201 embryo 04-06hr  (3831) embryo 06-08hr  (4043) embryo 08-10hr  (5121) embryo 10-12hr  (6722) embryo 12-14hr  (5781) embryo 14-16hr  (6491) embryo 16-18hr  (7254) embryo 18-20hr  (5552) embryo 20-22hr  (5190) embryo 22-24hr  (4765) larva L1  (10923) larva L2  (10488) larva L3 12hr old  (7020) larva L3 puffstage 1-2  (2994) larva L3 puffstage 3-6  (2986) larva L3 puffstage 7-9  (3560) white prepupae new  (3316) white prepupae 12hr  (2731) white prepupae 24hr  (3932) pupae 2d postWPP  (5747) pupae 3d postWPP  (6428) pupae 4d postWPP  (5004) adult male 01day  (5717) adult male 05day  (6544) adult male 30day  (5911) adult female 01day  (6002) adult female 05day  (7446) adult female 30day  (7946) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    8506 embryo 02-04hr    2201 embryo 04-06hr    3831 embryo 06-08hr    4043 embryo 08-10hr    5121 embryo 10-12hr    6722 embryo 12-14hr    5781 embryo 14-16hr    6491 embryo 16-18hr    7254 embryo 18-20hr    5552 embryo 20-22hr    5190 embryo 22-24hr    4765 larva L1  10923 larva L2  10488 larva L3 12hr old    7020 larva L3 puffstage 1-2    2994 larva L3 puffstage 3-6    2986 larva L3 puffstage 7-9    3560 white prepupae new    3316 white prepupae 12hr    2731 white prepupae 24hr    3932 pupae 2d postWPP    5747 pupae 3d postWPP    6428 pupae 4d postWPP    5004 adult male 01day    5717 adult male 05day    6544 adult male 30day    5911 adult female 01day    6002 adult female 05day    7446 adult female 30day    7946 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    8506 embryo 02-04hr    2201 embryo 04-06hr    3831 embryo 06-08hr    4043 embryo 08-10hr    5121 embryo 10-12hr    6722 embryo 12-14hr    5781 embryo 14-16hr    6491 embryo 16-18hr    7254 embryo 18-20hr    5552 embryo 20-22hr    5190 embryo 22-24hr    4765 larva L1    10923 larva L2    10488 larva L3 12hr old    7020 larva L3 puffstage 1-2    2994 larva L3 puffstage 3-6    2986 larva L3 puffstage 7-9    3560 white prepupae new    3316 white prepupae 12hr    2731 white prepupae 24hr    3932 pupae 2d postWPP    5747 pupae 3d postWPP    6428 pupae 4d postWPP    5004 adult male 01day    5717 adult male 05day    6544 adult male 30day    5911 adult female 01day    6002 adult female 05day    7446 adult female 30day    7946 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0027359    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0027359 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult central nervous system, larval fat body, larval/adult salivary gland, larval trachea, adult ovary, adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, adult spermathecae, adult male accessory gland, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0027359 expression level Tissue   Expression Level Larval Central Nervous System    488.9 Larval Midgut    291.2 Larval Hindgut    390.4 Larval Malpighian Tubules    192.3 Larval Fat Body    742.2 Larval Salivary Gland    771.9 Larval Trachea    685.5 Larval Carcass    337.575 Adult Head    423.7 Adult Eye    341.675 Adult Brain    566.5 Adult Thoracic-Abdominal Ganglion    571.6 Adult Crop    265.4 Adult Midgut    404.9 Adult Hindgut    332.5 Adult Malpighian Tubules    307.5 Adult Fat Body    451.5 Adult Salivary Gland    507 Adult Heart    348.775 Adult VirginFemale Spermatheca    280.7 Adult InseminatedFemale Spermatheca    312.3 Adult Ovary    776.2 Adult Testis    646.8 Adult Male Accessory Gland    448.9 Adult Carcass    415.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    488.9 Larval Midgut    291.2 Larval Hindgut    390.4 Larval Malpighian Tubules    192.3 Larval Fat Body  (742.2) Larval Salivary Gland  (771.9) Larval Trachea  (685.5) Larval Carcass    337.575 Adult Head    423.7 Adult Eye    341.675 Adult Brain  (566.5) Adult Thoracic-Abdominal Ganglion  (571.6) Adult Crop    265.4 Adult Midgut    404.9 Adult Hindgut    332.5 Adult Malpighian Tubules    307.5 Adult Fat Body    451.5 Adult Salivary Gland  507 Adult Heart    348.775 Adult VirginFemale Spermatheca    280.7 Adult InseminatedFemale Spermatheca    312.3 Adult Ovary  (776.2) Adult Testis  (646.8) Adult Male Accessory Gland    448.9 Adult Carcass    415.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    488.9 Larval Midgut    291.2 Larval Hindgut    390.4 Larval Malpighian Tubules    192.3 Larval Fat Body    742.2 Larval Salivary Gland    771.9 Larval Trachea    685.5 Larval Carcass    337.575 Adult Head    423.7 Adult Eye    341.675 Adult Brain    566.5 Adult Thoracic-Abdominal Ganglion    571.6 Adult Crop    265.4 Adult Midgut    404.9 Adult Hindgut    332.5 Adult Malpighian Tubules    307.5 Adult Fat Body    451.5 Adult Salivary Gland    507 Adult Heart    348.775 Adult VirginFemale Spermatheca    280.7 Adult InseminatedFemale Spermatheca    312.3 Adult Ovary    776.2 Adult Testis    646.8 Adult Male Accessory Gland    448.9 Adult Carcass    415.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    488.9 Larval Midgut    291.2 Larval Hindgut    390.4 Larval Malpighian Tubules    192.3 Larval Fat Body    742.2 Larval Salivary Gland    771.9 Larval Trachea    685.5 Larval Carcass    337.575 Adult Head    423.7 Adult Eye    341.675 Adult Brain    566.5 Adult Thoracic-Abdominal Ganglion    571.6 Adult Crop    265.4 Adult Midgut    404.9 Adult Hindgut    332.5 Adult Malpighian Tubules    307.5 Adult Fat Body    451.5 Adult Salivary Gland    507 Adult Heart    348.775 Adult VirginFemale Spermatheca    280.7 Adult InseminatedFemale Spermatheca    312.3 Adult Ovary    776.2 Adult Testis    646.8 Adult Male Accessory Gland    448.9 Adult Carcass    415.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0027359 expression level Tissue   Expression Level Larval Central Nervous System    488.9 Larval Midgut    291.2 Larval Hindgut    390.4 Larval Malpighian Tubules    192.3 Larval Fat Body    742.2 Larval Salivary Gland    771.9 Larval Trachea    685.5 Larval Carcass    337.575 Adult Head    423.7 Adult Eye    341.675 Adult Brain    566.5 Adult Thoracic-Abdominal Ganglion    571.6 Adult Crop    265.4 Adult Midgut    404.9 Adult Hindgut    332.5 Adult Malpighian Tubules    307.5 Adult Fat Body    451.5 Adult Salivary Gland    507 Adult Heart    348.775 Adult VirginFemale Spermatheca    280.7 Adult InseminatedFemale Spermatheca    312.3 Adult Ovary    776.2 Adult Testis    646.8 Adult Male Accessory Gland    448.9 Adult Carcass    415.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    488.9 Larval Midgut    291.2 Larval Hindgut    390.4 Larval Malpighian Tubules    192.3 Larval Fat Body  742.2 Larval Salivary Gland  771.9 Larval Trachea  685.5 Larval Carcass    337.575 Adult Head    423.7 Adult Eye    341.675 Adult Brain  566.5 Adult Thoracic-Abdominal Ganglion  571.6 Adult Crop    265.4 Adult Midgut    404.9 Adult Hindgut    332.5 Adult Malpighian Tubules    307.5 Adult Fat Body    451.5 Adult Salivary Gland  507 Adult Heart    348.775 Adult VirginFemale Spermatheca    280.7 Adult InseminatedFemale Spermatheca    312.3 Adult Ovary  776.2 Adult Testis  646.8 Adult Male Accessory Gland    448.9 Adult Carcass    415.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    488.9 Larval Midgut    291.2 Larval Hindgut    390.4 Larval Malpighian Tubules    192.3 Larval Fat Body    742.2 Larval Salivary Gland    771.9 Larval Trachea    685.5 Larval Carcass    337.575 Adult Head    423.7 Adult Eye    341.675 Adult Brain    566.5 Adult Thoracic-Abdominal Ganglion    571.6 Adult Crop    265.4 Adult Midgut    404.9 Adult Hindgut    332.5 Adult Malpighian Tubules    307.5 Adult Fat Body    451.5 Adult Salivary Gland    507 Adult Heart    348.775 Adult VirginFemale Spermatheca    280.7 Adult InseminatedFemale Spermatheca    312.3 Adult Ovary    776.2 Adult Testis    646.8 Adult Male Accessory Gland    448.9 Adult Carcass    415.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    488.9 Larval Midgut    291.2 Larval Hindgut    390.4 Larval Malpighian Tubules    192.3 Larval Fat Body    742.2 Larval Salivary Gland    771.9 Larval Trachea    685.5 Larval Carcass    337.575 Adult Head    423.7 Adult Eye    341.675 Adult Brain    566.5 Adult Thoracic-Abdominal Ganglion    571.6 Adult Crop    265.4 Adult Midgut    404.9 Adult Hindgut    332.5 Adult Malpighian Tubules    307.5 Adult Fat Body    451.5 Adult Salivary Gland    507 Adult Heart    348.775 Adult VirginFemale Spermatheca    280.7 Adult InseminatedFemale Spermatheca    312.3 Adult Ovary    776.2 Adult Testis    646.8 Adult Male Accessory Gland    448.9 Adult Carcass    415.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    423.7   NA  Eye    341.675   NA  Brain    566.5   488.9  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    571.6   NA  Crop    265.4   291.2  Midgut    404.9   390.4  Hindgut    332.5   192.3  Malpighian Tubules    307.5   742.2  Fat Body    451.5   771.9  Salivary Gland    507   NA  Heart    348.775   685.5  Trachea    NA   NA  VirginFemale Spermatheca    280.7   NA  InseminatedFemale Spermatheca    312.3   NA  Ovary    776.2   NA  Testis    646.8   NA  Male Accessory Gland    448.9   337.575  Carcass    415.9 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_19
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0027359 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG1728-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 Tim8GD13633 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of Tim8 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Tim8 Class Mutagen Stocks Known lesion Tim8GD13633 in vitro construct - RNAi in vitro construct - regulatory fusion 4 Yes Tim8JF01533 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Tim8KK108530 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD13633} NA P{KK108530} NA P{TRiP.JF01533} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 6 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 6 terms )
Molecular Function
CV term Evidence References
P-P-bond-hydrolysis-driven protein transmembrane transporter activity inferred from sequence or structural similarity (Swiss-Prot Project Members, 2000.10.1) inferred from sequence or structural similarity with UniProtKB:O60220 AND inferred from sequence or structural similarity with UniProt:Q9Y5J9 (Sardiello et al., 2003.6.11)
Biological Process
CV term Evidence References
protein import into mitochondrial inner membrane inferred from electronic annotation with InterPro:IPR004217 (FlyBase Curators et al., 2004-) protein targeting to mitochondrion inferred from sequence or structural similarity with UniProtKB:O60220 AND inferred from sequence or structural similarity with UniProt:Q9Y5J9 (Sardiello et al., 2003.6.11) protein transport inferred from sequence or structural similarity (Swiss-Prot Project Members, 2000.10.1)
Cellular Component
CV term Evidence References
mitochondrial inner membrane presequence translocase complex inferred from sequence or structural similarity (Swiss-Prot Project Members, 2000.10.1) inferred from sequence or structural similarity with UniProtKB:O60220 AND inferred from sequence or structural similarity with UniProt:Q9Y5J9 (Sardiello et al., 2003.6.11) non-traceable author statement (Bauer, 1999.4.12) mitochondrial intermembrane space protein transporter complex inferred from electronic annotation with InterPro:IPR004217 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Tim8 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 58493 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0027359 DroID - A comprehensive database of gene and protein interactions. • FBgn0027359 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 32081
Orthologs
Genome-wide drosophilid orthologs	Dana\GF19075 Dere\GG18412 Dgri\GH12183 Dmoj\GI15714 Dper\GL14853 Dpse\GA14436 Dsec\GM11476 Dsim\GD17019 Dvir\GJ15242 Dwil\GK25334 Dyak\GE15929
Curated drosophilid orthologs	Dpse\GA14436
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL000941-PA Aedes aegypti (mosquito) AGAP010606-PA Anopheles gambiae (mosquito) XP_001122230.1 Apis mellifera (honey bee) XP_001948140.1 Acyrthosiphon pisum (pea aphid) At5g50810.1 Arabidopsis thaliana (wall cress) 85581 Batrachochytrium dendrobatidis (chytrid fungus) 125212 Branchiostoma floridae (lancelet) XP_001898635.1 Brugia malayi (roundworm nematode) BGIBMGA014607-PA Bombyx mori (silk worm) ENSBTAP00000002594 Bos taurus (bovine) CAL0006119 Candida albicans (a form of yeast) CBP23176 Caenorhabditis briggsae (nematode) CE21655 Caenorhabditis elegans (worm) ENSCAFP00000020622 Canis familiaris (dog) CAGL0M00418g Candida glabrata (haploid yeast) JA02932 Caenorhabditis japonica (nematode) CMI216C Cyanidioschyzon merolae (red alga) cn06345 Cryptococcus neoformans (yeast-like fungus) CPIJ018054 Culex pipens (mosquito) ENSCPOP00000009946 Cavia porcellus (guinea pig) 94420 Chlamidomonas reinhardtii (green alga) RP10699 Caenorhabditis remanei (nematode) ENSCSAVP00000003555 Ciona savignyi (sedentary tunicate) 166027 Capitella spl (polychaete worm) DEHA2F00836g Debaryomyces Hansenii (yeast) 58280 Daphnia pulex (daphnia) ENSDARP00000072577 Danio rerio (zebra fish) ENSECAP00000012439 Equus caballus (horse) ENSGACP00000000050 Gymnopilus aculeatus (mushroom) ENSGALP00000007945 Gallus gallus (chicken) 83205 Hypsipyla robusta (cedar shoot borer) ENSP00000280354 Homo sapiens (human) ISCW010274-PA Ixodes scapularis (deer tick) KLLA0B04048g Kluyveromyces lactis (yeast) 125271 Lottia gigantea (owl limpet) 15640 Monocosta brevicollis (choanoflagellate) ENSMODP00000017990 Monodelphis domestica (gray opossum) ENSMMUP00000011560 Macaca mulatta (rhesus monkey) ENSMUSP00000039335 Mus musculus (house mouse) 154974 Nematostella vectensis (starlet anemone) 163262 Nematostella vectensis (starlet anemone) ENSOANP00000006708 Ornithorynchus anatinus (platypus) ENSORLP00000012707 Oryzias latipes (japanese killifish) LOC_Os08g42380.1 Oryza sativa (asian rice) PFL2065c Plasmodium falciparum (protozoal parasite) PHUM000957-PA Pediculus humanus (human body louse) 104663 Physcomitrella patens (moss) ENSPPYP00000004438 Pongo pygmaeus (orangutan) ENSPPYP00000023208 Pongo pygmaeus (orangutan) 74944 Phytophthora ramorum (sudden oak death pathogen) 570315 Populus trichocarpa (black cottonwood) ENSPTRP00000007357 Pan troglodytes (chimpanzee) ENSRNOP00000013188 Rattus norvegicus (norway rat) 4764737 Sorghum bicolor (sorghum) YJR135W-A Saccharomyces cerevisiae (budding yeast) Smp_010000 Schistosoma mansoni (trematode parasite) SPAC13G6.04 Schizosaccharomyces pombe (fission yeast) XP_001179520.1 Strongylocentrotus purpuratus (purple sea urchin) XP_001179640.1 Strongylocentrotus purpuratus (purple sea urchin) XP_001183127.1 Strongylocentrotus purpuratus (purple sea urchin) XP_001197587.1 Strongylocentrotus purpuratus (purple sea urchin) 24994 Trichoplax adhaerens (metazoa) TA17995 Theileria annulata (apicomplexan parasite) XP_974324.1 Tribolium castaneum (red flour beetle) ENSTNIP00000017393 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000031402 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000057627 Xenopus tropicalis (frog) YALI0D11572g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • LH11444 ISCW010274 FBgn0233486 FBgn0227325 FBgn0227293 FBgn0223801 FBgn0223486 FBgn0202438 FBgn0166419 JGI_V11_58280 FBgn0074464 FBgn0152457 FBgn0138463 FBgn0119662 FBgn0110627 FBgn0096087 CPIJ018054 CPIJ018053 BGIBMGA014607 ACYPI008610 GB14140 AGAP010606 AAEL000941 PB22076 PHUM206070 GLEAN_07570
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	31082 y1 v1; P{TRiP.JF01533}attP2
VDRC	v101349 P{KK108530}VIE-260B v40331 w1118; P{GD13633}v40331 v40332 w1118; P{GD13633}v40332 v28805 w1118; P{GD13633}v28805/TM3 v29583 w1118; P{GD13633}v29583/TM3
Genomic Clones ( 2 )
	BACR07P15 BACR28L07 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 30 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	SD06593
Other clones	DPiM_SD06593
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT05102 GM25093
Other clones	61713 72124 72822 99292 bs02b09 bs17d07 CK01.3D.B8 CK01.24D.D7 CK01.40A.D8 CK01.51A.D9 CK01.95A.D12 CK01.95B.E4 CK01.123D.H5 Dmel_dig_018616_0616_3498 EK063213 EK074036 EK074150 EK098703 EK185052 EK200423 EK201356 FGC012B03 FGC029G02 FGH102F02 FGM210C12 FGM219B01
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0027359 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32081
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Tim8 CG1728 (Zhong, 1999.11)
Source for database merge of	Source for merge of: Tim8 BcDNA:SD06593 (FlyBase, 1996-)
Additional comments	Source for merge of Tim8 BcDNA:SD06593 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_132485 RefSeq (Proteins) • NP_572713 DDBJ / EMBL / GenBank • AAD39162 AAF48036 AAM50018 AF142424 AI534085 AI944577 AI945835 AY118649 Entrez Gene - A searchable database of RefSeq genes. • 32081 UniProtKB/Swiss-Prot • Q9Y1A3
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Mitochondrial inner membrane translocase complex, Tim8/9/10/13-zinc finger-like (IPR004217) MitoDrome - A database of annotated Dmel nuclear genes encoding mitochondrial proteins • MTDROME01728
Linkouts
	BioGRID - A database of protein and genetic interactions • 58493 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0027359 DroID - A comprehensive database of gene and protein interactions. • FBgn0027359 DRSC - Results from RNAi screens. • FBgn0027359 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0027359 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG1728-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0027359 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32081 InParanoid A subset of ortholog calls from InParanoid. • AAEL000941-PA Aedes aegypti (mosquito) AGAP010606-PA Anopheles gambiae (mosquito) XP_001122230.1 Apis mellifera (honey bee) XP_001948140.1 Acyrthosiphon pisum (pea aphid) At5g50810.1 Arabidopsis thaliana (wall cress) 85581 Batrachochytrium dendrobatidis (chytrid fungus) 125212 Branchiostoma floridae (lancelet) XP_001898635.1 Brugia malayi (roundworm nematode) BGIBMGA014607-PA Bombyx mori (silk worm) ENSBTAP00000002594 Bos taurus (bovine) CAL0006119 Candida albicans (a form of yeast) CBP23176 Caenorhabditis briggsae (nematode) CE21655 Caenorhabditis elegans (worm) ENSCAFP00000020622 Canis familiaris (dog) CAGL0M00418g Candida glabrata (haploid yeast) JA02932 Caenorhabditis japonica (nematode) CMI216C Cyanidioschyzon merolae (red alga) cn06345 Cryptococcus neoformans (yeast-like fungus) CPIJ018054 Culex pipens (mosquito) ENSCPOP00000009946 Cavia porcellus (guinea pig) 94420 Chlamidomonas reinhardtii (green alga) RP10699 Caenorhabditis remanei (nematode) ENSCSAVP00000003555 Ciona savignyi (sedentary tunicate) 166027 Capitella spl (polychaete worm) DEHA2F00836g Debaryomyces Hansenii (yeast) 58280 Daphnia pulex (daphnia) ENSDARP00000072577 Danio rerio (zebra fish) ENSECAP00000012439 Equus caballus (horse) ENSGACP00000000050 Gymnopilus aculeatus (mushroom) ENSGALP00000007945 Gallus gallus (chicken) 83205 Hypsipyla robusta (cedar shoot borer) ENSP00000280354 Homo sapiens (human) ISCW010274-PA Ixodes scapularis (deer tick) KLLA0B04048g Kluyveromyces lactis (yeast) 125271 Lottia gigantea (owl limpet) 15640 Monocosta brevicollis (choanoflagellate) ENSMODP00000017990 Monodelphis domestica (gray opossum) ENSMMUP00000011560 Macaca mulatta (rhesus monkey) ENSMUSP00000039335 Mus musculus (house mouse) 154974 Nematostella vectensis (starlet anemone) 163262 Nematostella vectensis (starlet anemone) ENSOANP00000006708 Ornithorynchus anatinus (platypus) ENSORLP00000012707 Oryzias latipes (japanese killifish) LOC_Os08g42380.1 Oryza sativa (asian rice) PFL2065c Plasmodium falciparum (protozoal parasite) PHUM000957-PA Pediculus humanus (human body louse) 104663 Physcomitrella patens (moss) ENSPPYP00000004438 Pongo pygmaeus (orangutan) ENSPPYP00000023208 Pongo pygmaeus (orangutan) 74944 Phytophthora ramorum (sudden oak death pathogen) 570315 Populus trichocarpa (black cottonwood) ENSPTRP00000007357 Pan troglodytes (chimpanzee) ENSRNOP00000013188 Rattus norvegicus (norway rat) 4764737 Sorghum bicolor (sorghum) YJR135W-A Saccharomyces cerevisiae (budding yeast) Smp_010000 Schistosoma mansoni (trematode parasite) SPAC13G6.04 Schizosaccharomyces pombe (fission yeast) XP_001179520.1 Strongylocentrotus purpuratus (purple sea urchin) XP_001179640.1 Strongylocentrotus purpuratus (purple sea urchin) XP_001183127.1 Strongylocentrotus purpuratus (purple sea urchin) XP_001197587.1 Strongylocentrotus purpuratus (purple sea urchin) 24994 Trichoplax adhaerens (metazoa) TA17995 Theileria annulata (apicomplexan parasite) XP_974324.1 Tribolium castaneum (red flour beetle) ENSTNIP00000017393 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000031402 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000057627 Xenopus tropicalis (frog) YALI0D11572g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 32081 modMine - Data generated by the modENCODE project. • FBgn0027359 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • LH11444 ISCW010274 FBgn0233486 FBgn0227325 FBgn0227293 FBgn0223801 FBgn0223486 FBgn0202438 FBgn0166419 JGI_V11_58280 FBgn0074464 FBgn0152457 FBgn0138463 FBgn0119662 FBgn0110627 FBgn0096087 CPIJ018054 CPIJ018053 BGIBMGA014607 ACYPI008610 GB14140 AGAP010606 AAEL000941 PB22076 PHUM206070 GLEAN_07570
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	BcDNA:SD06593   CG1728 (Keleman et al., 2009.8.5, Ni et al., 2008) Tim8 (Mack et al., 2006, McGraw et al., 2008)
Name Synonym	Tim8
Secondary FlyBase IDs
	FBgn0062891
References ( 19 )
Research paper	McGraw et al., 2008, Genetics 179(3): 1395--1408 Post-mating gene expression profiles of female Drosophila melanogaster in response to time and to four male accessory gland proteins. [FBrf0207105] Ni et al., 2008, Nature Methods 5(1): 49--51 Vector and parameters for targeted transgenic RNA interference in Drosophila melanogaster. [FBrf0200406] Mack et al., 2006, Proc. Natl. Acad. Sci. USA 103(27): 10358--10363 Mating-responsive genes in reproductive tissues of female Drosophila melanogaster. [FBrf0194111] Inlow and Restifo, 2004, Genetics 166(2): 835--881 Molecular and comparative genetics of mental retardation. [FBrf0174714]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Driscoll and Gerstbrein, 2003, Nature Rev. Genet. 4(3): Dying for a cause: invertebrate genetics takes on human neurodegeneration. [FBrf0159901] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Sardiello et al., 2003.6.11, MitoDrome: A database of Drosophila melanogaster nuclear genes encoding proteins targeted to the mitochondrion. MitoDrome: A database of Drosophila melanogaster nuclear genes encoding proteins targeted to the mitochondrion. [FBrf0159903] Oliver, 2001.8.16, File from B. Oliver containing information on ESTs expressed in the Drosophila testis, described in Andrews et al., 2000, Genome Res. 10(12): 2030-2043 (FBrf0132348). File from B. Oliver containing information on ESTs expressed in the Drosophila testis, described in Andrews et al., 2000, Genome Res. 10(12): 2030-2043 (FBrf0132348). [FBrf0137492]
FlyBase analysis	FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946]
Curated genome annotation	Zhong, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126703]
DNA/RNA sequence record	Bauer, 1999.4.12, GenBank/EMBL/DDBJ: AF142424 Drosophila melanogaster small zinc finger protein Tim8 (Tim8) mRNA, complete cds. [FBrf0113138]
Protein sequence record	Swiss-Prot Project Members, 2000.10.1, UniProtKB: Q9Y1A3 MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM8. [FBrf0136217]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]