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Gene Dmel\Ublcp1

General Information
Symbol	Dmel\Ublcp1	Species	D. melanogaster
Name	Ubiquitin-like domain-containing C-terminal domain phosphatase 1	Annotation symbol	CG6697
Feature type	protein_coding_gene	FlyBase ID	FBgn0027526
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	3R	Recombination map
Cytogenetic map	94D10-94D10	Sequence location	3R:18,887,215..18,888,473 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Ubiquitin-like domain-containing C-terminal domain phosphatase 1 is referred to in FlyBase by the symbol Dmel\Ublcp1 (CG6697, FBgn0027526). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: phosphoprotein phosphatase activity. The biological processes in which it is involved are not known. 9 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: HAD-like domain; HAD-superfamily hydrolase, subfamily IIID; NLI interacting factor; Ubiquitin; Ubiquitin supergroup. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1635003_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG6697. Gene sequence location is 3R:18887215..18888473.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 94D10-94D10   Limits computationally determined from genome sequence between P{lacW}GclmL0580 and P{EP}hhEP3521
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Ublcp1 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.48
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Ublcp1-RA FBtr0084347  NM_142861   1202   320
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Ublcp1-PA   FBpp0083740   37.3   320   6.92     NP_651118   AAF56091
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Ubiquitin (IPR000626) NLI interacting factor (IPR004274) HAD-superfamily hydrolase, subfamily IIID (IPR011943) Ubiquitin supergroup (IPR019955) HAD-like domain (IPR023214)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA246382   AA390894   AA735553   AA817183   AA940861   AE014297 AAF56091   AF132171 AAD34759   AI064082   AI455158   AI456079   AI515766   BF503118   BI170925   BI212122   BI228040   BI240478   BI357783   BI367252   BI482719   BI482859   BI483158   BI483219   BI617526   BI622721   BI634762   BP549290   BP549291   CO309820   CZ482997   CZ486366   CZ487206   CZ487207   CZ489509   CZ489680   EC247890   EC250164   GH752899   GH753998   GH754891   GH761395   GH772733   GH776371   GH776927   GH782754   GH786900   GH795975   GH797543   GH804236   GH806355   GH807291   GH809024   GH813266   GH816040   GH816260   GH817988   GH818197   GH818403   GH819706   GH828195   GH828666   GH829316   GH830543   GH847819   GH848537   GH849661   GH852032   GH853632   GH854160   GH854506   GH854597   GH856323   GH860909   GH869653   GH874269   GH877372   GH879260   GH881124   GH881565   GH887480   GH891709   GH893352   GH895996   GH898021   GH902199   GH904892   GH907440   GH908817   GH910049   GH914941   GH917925   GH930650   GH934661   GH935009   GH937016
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9XZ16
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   organism   (Fisher et al., 2012) embryonic stage 7 -- 8   organism | ubiquitous   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    288.75 Larval Midgut    217 Larval Hindgut    215.1 Larval Malpighian Tubules    322 Larval Fat Body    268.9 Larval Salivary Gland    437.1 Larval Trachea    336.775 Larval Carcass    324.975 Adult Head    135.1 Adult Eye    98.975 Adult Brain    186.7 Adult Thoracic-Abdominal Ganglion    169.6 Adult Crop    133.5 Adult Midgut    235.1 Adult Hindgut    123.4 Adult Malpighian Tubules    227.3 Adult Fat Body    215.4 Adult Salivary Gland    237.9 Adult Heart    201.675 Adult VirginFemale Spermatheca    125.2 Adult InseminatedFemale Spermatheca    144.3 Adult Ovary    493.2 Adult Testis    374.5 Adult Male Accessory Gland    283.6 Adult Carcass    168.8 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    288.75 Larval Midgut    217 Larval Hindgut    215.1 Larval Malpighian Tubules    322 Larval Fat Body    268.9 Larval Salivary Gland    437.1 Larval Trachea    336.775 Larval Carcass    324.975 Adult Head    135.1 Adult Eye    98.975 Adult Brain    186.7 Adult Thoracic-Abdominal Ganglion    169.6 Adult Crop    133.5 Adult Midgut    235.1 Adult Hindgut    123.4 Adult Malpighian Tubules    227.3 Adult Fat Body    215.4 Adult Salivary Gland    237.9 Adult Heart    201.675 Adult VirginFemale Spermatheca    125.2 Adult InseminatedFemale Spermatheca    144.3 Adult Ovary    493.2 Adult Testis    374.5 Adult Male Accessory Gland    283.6 Adult Carcass    168.8 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    288.75 Larval Midgut    217 Larval Hindgut    215.1 Larval Malpighian Tubules    322 Larval Fat Body    268.9 Larval Salivary Gland    437.1 Larval Trachea    336.775 Larval Carcass    324.975 Adult Head    135.1 Adult Eye    98.975 Adult Brain    186.7 Adult Thoracic-Abdominal Ganglion    169.6 Adult Crop    133.5 Adult Midgut    235.1 Adult Hindgut    123.4 Adult Malpighian Tubules    227.3 Adult Fat Body    215.4 Adult Salivary Gland    237.9 Adult Heart    201.675 Adult VirginFemale Spermatheca    125.2 Adult InseminatedFemale Spermatheca    144.3 Adult Ovary    493.2 Adult Testis    374.5 Adult Male Accessory Gland    283.6 Adult Carcass    168.8 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    288.75 Larval Midgut    217 Larval Hindgut    215.1 Larval Malpighian Tubules    322 Larval Fat Body    268.9 Larval Salivary Gland    437.1 Larval Trachea    336.775 Larval Carcass    324.975 Adult Head    135.1 Adult Eye    98.975 Adult Brain    186.7 Adult Thoracic-Abdominal Ganglion    169.6 Adult Crop    133.5 Adult Midgut    235.1 Adult Hindgut    123.4 Adult Malpighian Tubules    227.3 Adult Fat Body    215.4 Adult Salivary Gland    237.9 Adult Heart    201.675 Adult VirginFemale Spermatheca    125.2 Adult InseminatedFemale Spermatheca    144.3 Adult Ovary    493.2 Adult Testis    374.5 Adult Male Accessory Gland    283.6 Adult Carcass    168.8 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    288.75 Larval Midgut    217 Larval Hindgut    215.1 Larval Malpighian Tubules    322 Larval Fat Body    268.9 Larval Salivary Gland    437.1 Larval Trachea    336.775 Larval Carcass    324.975 Adult Head    135.1 Adult Eye    98.975 Adult Brain    186.7 Adult Thoracic-Abdominal Ganglion    169.6 Adult Crop    133.5 Adult Midgut    235.1 Adult Hindgut    123.4 Adult Malpighian Tubules    227.3 Adult Fat Body    215.4 Adult Salivary Gland    237.9 Adult Heart    201.675 Adult VirginFemale Spermatheca    125.2 Adult InseminatedFemale Spermatheca    144.3 Adult Ovary    493.2 Adult Testis    374.5 Adult Male Accessory Gland    283.6 Adult Carcass    168.8 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    288.75 Larval Midgut    217 Larval Hindgut    215.1 Larval Malpighian Tubules    322 Larval Fat Body    268.9 Larval Salivary Gland    437.1 Larval Trachea    336.775 Larval Carcass    324.975 Adult Head    135.1 Adult Eye    98.975 Adult Brain    186.7 Adult Thoracic-Abdominal Ganglion    169.6 Adult Crop    133.5 Adult Midgut    235.1 Adult Hindgut    123.4 Adult Malpighian Tubules    227.3 Adult Fat Body    215.4 Adult Salivary Gland    237.9 Adult Heart    201.675 Adult VirginFemale Spermatheca    125.2 Adult InseminatedFemale Spermatheca    144.3 Adult Ovary    493.2 Adult Testis    374.5 Adult Male Accessory Gland    283.6 Adult Carcass    168.8 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    288.75 Larval Midgut    217 Larval Hindgut    215.1 Larval Malpighian Tubules    322 Larval Fat Body    268.9 Larval Salivary Gland    437.1 Larval Trachea    336.775 Larval Carcass    324.975 Adult Head    135.1 Adult Eye    98.975 Adult Brain    186.7 Adult Thoracic-Abdominal Ganglion    169.6 Adult Crop    133.5 Adult Midgut    235.1 Adult Hindgut    123.4 Adult Malpighian Tubules    227.3 Adult Fat Body    215.4 Adult Salivary Gland    237.9 Adult Heart    201.675 Adult VirginFemale Spermatheca    125.2 Adult InseminatedFemale Spermatheca    144.3 Adult Ovary    493.2 Adult Testis    374.5 Adult Male Accessory Gland    283.6 Adult Carcass    168.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    288.75 Larval Midgut    217 Larval Hindgut    215.1 Larval Malpighian Tubules    322 Larval Fat Body    268.9 Larval Salivary Gland    437.1 Larval Trachea    336.775 Larval Carcass    324.975 Adult Head    135.1 Adult Eye    98.975 Adult Brain    186.7 Adult Thoracic-Abdominal Ganglion    169.6 Adult Crop    133.5 Adult Midgut    235.1 Adult Hindgut    123.4 Adult Malpighian Tubules    227.3 Adult Fat Body    215.4 Adult Salivary Gland    237.9 Adult Heart    201.675 Adult VirginFemale Spermatheca    125.2 Adult InseminatedFemale Spermatheca    144.3 Adult Ovary    493.2 Adult Testis    374.5 Adult Male Accessory Gland    283.6 Adult Carcass    168.8 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    135.1   NA  Eye    98.975   NA  Brain    186.7   288.75  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    169.6   NA  Crop    133.5   217  Midgut    235.1   215.1  Hindgut    123.4   322  Malpighian Tubules    227.3   268.9  Fat Body    215.4   437.1  Salivary Gland    237.9   NA  Heart    201.675   336.775  Trachea    NA   NA  VirginFemale Spermatheca    125.2   NA  InseminatedFemale Spermatheca    144.3   NA  Ovary    493.2   NA  Testis    374.5   NA  Male Accessory Gland    283.6   324.975  Carcass    168.8 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    29 central nervous system, pupae P8    15 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    12 head, mated 1-day female    8 head, mated 4-day female    10 head, mated 20-day female    9 head, mated 1-day male    9 head, mated 4-day male    15 head, mated 20-day male    20 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    26 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    15 digestive system, 4-day adult    17 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    20 fat body, pupae P8    23 carcass, larvae L3 wandering    33 carcass, 1-day adult    8 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    75 ovary, mated 4-day female    59 testis, mated 4-day male    56 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (49) central nervous system, larvae L3  (29) central nervous system, pupae P8    15 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    12 head, mated 1-day female    8 head, mated 4-day female    10 head, mated 20-day female    9 head, mated 1-day male    9 head, mated 4-day male    15 head, mated 20-day male    20 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae  26 digestive system, larvae L3 wandering  (30) digestive system, 1-day adult    15 digestive system, 4-day adult    17 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    20 fat body, pupae P8    23 carcass, larvae L3 wandering  (33) carcass, 1-day adult    8 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female  (75) ovary, mated 4-day female  (59) testis, mated 4-day male  (56) accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    29 central nervous system, pupae P8    15 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    12 head, mated 1-day female    8 head, mated 4-day female    10 head, mated 20-day female    9 head, mated 1-day male    9 head, mated 4-day male    15 head, mated 20-day male    20 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    26 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    15 digestive system, 4-day adult    17 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    20 fat body, pupae P8    23 carcass, larvae L3 wandering    33 carcass, 1-day adult    8 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    75 ovary, mated 4-day female    59 testis, mated 4-day male    56 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    29 central nervous system, pupae P8    15 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    12 head, mated 1-day female    8 head, mated 4-day female    10 head, mated 20-day female    9 head, mated 1-day male    9 head, mated 4-day male    15 head, mated 20-day male    20 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    26 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    15 digestive system, 4-day adult    17 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    20 fat body, pupae P8    23 carcass, larvae L3 wandering    33 carcass, 1-day adult    8 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    75 ovary, mated 4-day female    59 testis, mated 4-day male    56 accessory gland, mated 4-day male    14 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    29 central nervous system, pupae P8    15 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    12 head, mated 1-day female    8 head, mated 4-day female    10 head, mated 20-day female    9 head, mated 1-day male    9 head, mated 4-day male    15 head, mated 20-day male    20 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    26 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    15 digestive system, 4-day adult    17 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    20 fat body, pupae P8    23 carcass, larvae L3 wandering    33 carcass, 1-day adult    8 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    75 ovary, mated 4-day female    59 testis, mated 4-day male    56 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (49) central nervous system, larvae L3  29 central nervous system, pupae P8    15 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    12 head, mated 1-day female    8 head, mated 4-day female    10 head, mated 20-day female    9 head, mated 1-day male    9 head, mated 4-day male    15 head, mated 20-day male    20 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae  26 digestive system, larvae L3 wandering  30 digestive system, 1-day adult    15 digestive system, 4-day adult    17 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    20 fat body, pupae P8    23 carcass, larvae L3 wandering  (33) carcass, 1-day adult    8 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female  (75) ovary, mated 4-day female  (59) testis, mated 4-day male  (56) accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    29 central nervous system, pupae P8    15 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    12 head, mated 1-day female    8 head, mated 4-day female    10 head, mated 20-day female    9 head, mated 1-day male    9 head, mated 4-day male    15 head, mated 20-day male    20 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    26 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    15 digestive system, 4-day adult    17 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    20 fat body, pupae P8    23 carcass, larvae L3 wandering    33 carcass, 1-day adult    8 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    75 ovary, mated 4-day female    59 testis, mated 4-day male    56 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    29 central nervous system, pupae P8    15 head, virgin 1-day female    6 head, virgin 4-day female    8 head, virgin 20-day female    12 head, mated 1-day female    8 head, mated 4-day female    10 head, mated 20-day female    9 head, mated 1-day male    9 head, mated 4-day male    15 head, mated 20-day male    20 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    26 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    15 digestive system, 4-day adult    17 digestive system, 20-day adult    14 fat body, larvae L3 wandering    8 fat body, white prepupae    20 fat body, pupae P8    23 carcass, larvae L3 wandering    33 carcass, 1-day adult    8 carcass, 4-day adult    11 carcass, 20-day adult    10 ovary, virgin 4-day female    75 ovary, mated 4-day female    59 testis, mated 4-day male    56 accessory gland, mated 4-day male    14 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    111 embryo 02-04hr    134 embryo 04-06hr    66 embryo 06-08hr    48 embryo 08-10hr    57 embryo 10-12hr    45 embryo 12-14hr    38 embryo 14-16hr    40 embryo 16-18hr    32 embryo 18-20hr    19 embryo 20-22hr    34 embryo 22-24hr    32 larva L1    17 larva L2    19 larva L3 12hr old    15 larva L3 puffstage 1-2    24 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    53 white prepupae new    53 white prepupae 12hr    31 white prepupae 24hr    37 pupae 2d postWPP    31 pupae 3d postWPP    20 pupae 4d postWPP    19 adult male 01day    23 adult male 05day    33 adult male 30day    32 adult female 01day    29 adult female 05day    48 adult female 30day    50 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (111) embryo 02-04hr  (134) embryo 04-06hr  (66) embryo 06-08hr  (48) embryo 08-10hr  (57) embryo 10-12hr  (45) embryo 12-14hr  (38) embryo 14-16hr  (40) embryo 16-18hr  (32) embryo 18-20hr    19 embryo 20-22hr  (34) embryo 22-24hr  (32) larva L1    17 larva L2    19 larva L3 12hr old    15 larva L3 puffstage 1-2    24 larva L3 puffstage 3-6  (37) larva L3 puffstage 7-9  (53) white prepupae new  (53) white prepupae 12hr  (31) white prepupae 24hr  (37) pupae 2d postWPP  (31) pupae 3d postWPP    20 pupae 4d postWPP    19 adult male 01day    23 adult male 05day  (33) adult male 30day  (32) adult female 01day  (29) adult female 05day  (48) adult female 30day  (50) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (111) embryo 02-04hr  (134) embryo 04-06hr    66 embryo 06-08hr    48 embryo 08-10hr    57 embryo 10-12hr    45 embryo 12-14hr    38 embryo 14-16hr    40 embryo 16-18hr    32 embryo 18-20hr    19 embryo 20-22hr    34 embryo 22-24hr    32 larva L1    17 larva L2    19 larva L3 12hr old    15 larva L3 puffstage 1-2    24 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    53 white prepupae new    53 white prepupae 12hr    31 white prepupae 24hr    37 pupae 2d postWPP    31 pupae 3d postWPP    20 pupae 4d postWPP    19 adult male 01day    23 adult male 05day    33 adult male 30day    32 adult female 01day    29 adult female 05day    48 adult female 30day    50 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    111 embryo 02-04hr    134 embryo 04-06hr    66 embryo 06-08hr    48 embryo 08-10hr    57 embryo 10-12hr    45 embryo 12-14hr    38 embryo 14-16hr    40 embryo 16-18hr    32 embryo 18-20hr    19 embryo 20-22hr    34 embryo 22-24hr    32 larva L1    17 larva L2    19 larva L3 12hr old    15 larva L3 puffstage 1-2    24 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    53 white prepupae new    53 white prepupae 12hr    31 white prepupae 24hr    37 pupae 2d postWPP    31 pupae 3d postWPP    20 pupae 4d postWPP    19 adult male 01day    23 adult male 05day    33 adult male 30day    32 adult female 01day    29 adult female 05day    48 adult female 30day    50 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    111 embryo 02-04hr    134 embryo 04-06hr    66 embryo 06-08hr    48 embryo 08-10hr    57 embryo 10-12hr    45 embryo 12-14hr    38 embryo 14-16hr    40 embryo 16-18hr    32 embryo 18-20hr    19 embryo 20-22hr    34 embryo 22-24hr    32 larva L1    17 larva L2    19 larva L3 12hr old    15 larva L3 puffstage 1-2    24 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    53 white prepupae new    53 white prepupae 12hr    31 white prepupae 24hr    37 pupae 2d postWPP    31 pupae 3d postWPP    20 pupae 4d postWPP    19 adult male 01day    23 adult male 05day    33 adult male 30day    32 adult female 01day    29 adult female 05day    48 adult female 30day    50 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (111) embryo 02-04hr  (134) embryo 04-06hr  (66) embryo 06-08hr  (48) embryo 08-10hr  (57) embryo 10-12hr  (45) embryo 12-14hr  (38) embryo 14-16hr  (40) embryo 16-18hr  32 embryo 18-20hr    19 embryo 20-22hr  (34) embryo 22-24hr  32 larva L1    17 larva L2    19 larva L3 12hr old    15 larva L3 puffstage 1-2    24 larva L3 puffstage 3-6  (37) larva L3 puffstage 7-9  (53) white prepupae new  (53) white prepupae 12hr  31 white prepupae 24hr  (37) pupae 2d postWPP  31 pupae 3d postWPP    20 pupae 4d postWPP    19 adult male 01day    23 adult male 05day  (33) adult male 30day  32 adult female 01day  29 adult female 05day  (48) adult female 30day  (50) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  111 embryo 02-04hr  134 embryo 04-06hr    66 embryo 06-08hr    48 embryo 08-10hr    57 embryo 10-12hr    45 embryo 12-14hr    38 embryo 14-16hr    40 embryo 16-18hr    32 embryo 18-20hr    19 embryo 20-22hr    34 embryo 22-24hr    32 larva L1    17 larva L2    19 larva L3 12hr old    15 larva L3 puffstage 1-2    24 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    53 white prepupae new    53 white prepupae 12hr    31 white prepupae 24hr    37 pupae 2d postWPP    31 pupae 3d postWPP    20 pupae 4d postWPP    19 adult male 01day    23 adult male 05day    33 adult male 30day    32 adult female 01day    29 adult female 05day    48 adult female 30day    50 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    111 embryo 02-04hr    134 embryo 04-06hr    66 embryo 06-08hr    48 embryo 08-10hr    57 embryo 10-12hr    45 embryo 12-14hr    38 embryo 14-16hr    40 embryo 16-18hr    32 embryo 18-20hr    19 embryo 20-22hr    34 embryo 22-24hr    32 larva L1    17 larva L2    19 larva L3 12hr old    15 larva L3 puffstage 1-2    24 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    53 white prepupae new    53 white prepupae 12hr    31 white prepupae 24hr    37 pupae 2d postWPP    31 pupae 3d postWPP    20 pupae 4d postWPP    19 adult male 01day    23 adult male 05day    33 adult male 30day    32 adult female 01day    29 adult female 05day    48 adult female 30day    50 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    64 Schneider line 2 Sg4    39 embryonic 1182-4H    43 embryonic GM2    59 embryonic Kc167    132 embryonic S1    102 embryonic S3    55 leg disc CME L1    54 wing disc CME-W2    45 wing disc ML-DmD8    38 wing disc ML-DmD9    59 wing disc ML-DmD16-c3    59 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    52 eye-antennal disc ML-DmD11    37 antennal disc ML-DmD20-c5    43 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    55 CNS ML-DmBG2-c2    63 tumorous blood cells mbn2    47 ovary fGS/OSS    54 ovary OSC    53 ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (64) Schneider line 2 Sg4  (39) embryonic 1182-4H  (43) embryonic GM2  (59) embryonic Kc167  (132) embryonic S1  (102) embryonic S3  (55) leg disc CME L1  (54) wing disc CME-W2  (45) wing disc ML-DmD8  (38) wing disc ML-DmD9  (59) wing disc ML-DmD16-c3  (59) wing disc ML-DmD21  (39) wing disc ML-DmD32  (53) haltere disc ML-DmD17-c3  (52) eye-antennal disc ML-DmD11  (37) antennal disc ML-DmD20-c5  (43) mixed discs ML-DmD4-c1  (43) CNS ML-DmBG1-c1  (55) CNS ML-DmBG2-c2  (63) tumorous blood cells mbn2  (47) ovary fGS/OSS  (54) ovary OSC  (53) ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    64 Schneider line 2 Sg4    39 embryonic 1182-4H    43 embryonic GM2    59 embryonic Kc167  (132) embryonic S1  102 embryonic S3    55 leg disc CME L1    54 wing disc CME-W2    45 wing disc ML-DmD8    38 wing disc ML-DmD9    59 wing disc ML-DmD16-c3    59 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    52 eye-antennal disc ML-DmD11    37 antennal disc ML-DmD20-c5    43 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    55 CNS ML-DmBG2-c2    63 tumorous blood cells mbn2    47 ovary fGS/OSS    54 ovary OSC    53 ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    64 Schneider line 2 Sg4    39 embryonic 1182-4H    43 embryonic GM2    59 embryonic Kc167    132 embryonic S1    102 embryonic S3    55 leg disc CME L1    54 wing disc CME-W2    45 wing disc ML-DmD8    38 wing disc ML-DmD9    59 wing disc ML-DmD16-c3    59 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    52 eye-antennal disc ML-DmD11    37 antennal disc ML-DmD20-c5    43 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    55 CNS ML-DmBG2-c2    63 tumorous blood cells mbn2    47 ovary fGS/OSS    54 ovary OSC    53 ovary OSS    21 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    64 Schneider line 2 Sg4    39 embryonic 1182-4H    43 embryonic GM2    59 embryonic Kc167    132 embryonic S1    102 embryonic S3    55 leg disc CME L1    54 wing disc CME-W2    45 wing disc ML-DmD8    38 wing disc ML-DmD9    59 wing disc ML-DmD16-c3    59 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    52 eye-antennal disc ML-DmD11    37 antennal disc ML-DmD20-c5    43 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    55 CNS ML-DmBG2-c2    63 tumorous blood cells mbn2    47 ovary fGS/OSS    54 ovary OSC    53 ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (64) Schneider line 2 Sg4  (39) embryonic 1182-4H  (43) embryonic GM2  (59) embryonic Kc167  (132) embryonic S1  (102) embryonic S3  (55) leg disc CME L1  (54) wing disc CME-W2  (45) wing disc ML-DmD8  (38) wing disc ML-DmD9  (59) wing disc ML-DmD16-c3  (59) wing disc ML-DmD21  (39) wing disc ML-DmD32  (53) haltere disc ML-DmD17-c3  (52) eye-antennal disc ML-DmD11  (37) antennal disc ML-DmD20-c5  (43) mixed discs ML-DmD4-c1  (43) CNS ML-DmBG1-c1  (55) CNS ML-DmBG2-c2  (63) tumorous blood cells mbn2  (47) ovary fGS/OSS  (54) ovary OSC  (53) ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    64 Schneider line 2 Sg4    39 embryonic 1182-4H    43 embryonic GM2    59 embryonic Kc167  132 embryonic S1  102 embryonic S3    55 leg disc CME L1    54 wing disc CME-W2    45 wing disc ML-DmD8    38 wing disc ML-DmD9    59 wing disc ML-DmD16-c3    59 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    52 eye-antennal disc ML-DmD11    37 antennal disc ML-DmD20-c5    43 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    55 CNS ML-DmBG2-c2    63 tumorous blood cells mbn2    47 ovary fGS/OSS    54 ovary OSC    53 ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    64 Schneider line 2 Sg4    39 embryonic 1182-4H    43 embryonic GM2    59 embryonic Kc167    132 embryonic S1    102 embryonic S3    55 leg disc CME L1    54 wing disc CME-W2    45 wing disc ML-DmD8    38 wing disc ML-DmD9    59 wing disc ML-DmD16-c3    59 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    52 eye-antennal disc ML-DmD11    37 antennal disc ML-DmD20-c5    43 mixed discs ML-DmD4-c1    43 CNS ML-DmBG1-c1    55 CNS ML-DmBG2-c2    63 tumorous blood cells mbn2    47 ovary fGS/OSS    54 ovary OSC    53 ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    16 heat shock, 4-day adult    36 Cadmium 50 mM 6 hrs, larvae L3    17 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    32 Cadmium 100 mM 48 hrs, 4-day adult    52 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    58 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    53 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    40 Paraquat 10 mM 48 hrs, 4-day adult    44 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    16 heat shock, 4-day adult  (36) Cadmium 50 mM 6 hrs, larvae L3    17 Cadmium 50 mM 12 hrs, larvae L3  (35) Cadmium 50 mM 48 hrs, 4-day adult  (32) Cadmium 100 mM 48 hrs, 4-day adult  (52) Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult  (36) Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3  (58) Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (53) Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult  (40) Paraquat 10 mM 48 hrs, 4-day adult  (44) Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    21 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    16 heat shock, 4-day adult    36 Cadmium 50 mM 6 hrs, larvae L3    17 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    32 Cadmium 100 mM 48 hrs, 4-day adult    52 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    58 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    53 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    40 Paraquat 10 mM 48 hrs, 4-day adult    44 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    16 heat shock, 4-day adult    36 Cadmium 50 mM 6 hrs, larvae L3    17 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    32 Cadmium 100 mM 48 hrs, 4-day adult    52 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    58 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    53 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    40 Paraquat 10 mM 48 hrs, 4-day adult    44 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    21 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    16 heat shock, 4-day adult    36 Cadmium 50 mM 6 hrs, larvae L3    17 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    32 Cadmium 100 mM 48 hrs, 4-day adult    52 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    58 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    53 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    40 Paraquat 10 mM 48 hrs, 4-day adult    44 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    16 heat shock, 4-day adult  (36) Cadmium 50 mM 6 hrs, larvae L3    17 Cadmium 50 mM 12 hrs, larvae L3  (35) Cadmium 50 mM 48 hrs, 4-day adult  32 Cadmium 100 mM 48 hrs, 4-day adult  (52) Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult  (36) Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3  (58) Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (53) Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult  (40) Paraquat 10 mM 48 hrs, 4-day adult  (44) Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    21 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    16 heat shock, 4-day adult    36 Cadmium 50 mM 6 hrs, larvae L3    17 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    32 Cadmium 100 mM 48 hrs, 4-day adult    52 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    58 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    53 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    40 Paraquat 10 mM 48 hrs, 4-day adult    44 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    16 heat shock, 4-day adult    36 Cadmium 50 mM 6 hrs, larvae L3    17 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    32 Cadmium 100 mM 48 hrs, 4-day adult    52 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    36 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    58 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    20 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    53 Caffeine 25 mg/ml 48 hrs, 4-day adult    19 Paraquat 5 mM 48 hrs, 4-day adult    40 Paraquat 10 mM 48 hrs, 4-day adult    44 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_01 mE1_20_mRNA_expression_cluster_03
External Data & Images
Linkouts	BDGP expression data • LD21504 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0027526 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6697-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for Ublcp1 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 Ublcp1GD12006 Phenotype manifest in Allele
Classical Alleles ( 6 )
For All Classical Alleles Show
Allele of Ublcp1 Class Mutagen Stocks Known lesion Ublcp1DG04502 P-element activity 1 -- Ublcp1f00534 piggyBac transposase 1 -- Ublcp1f03776 piggyBac transposase 1 -- Ublcp1f04661 piggyBac transposase 0 -- Ublcp1f06785 piggyBac transposase 0 -- Ublcp1f06939 piggyBac transposase 0 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Ublcp1 Class Mutagen Stocks Known lesion Ublcp1GD12006 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Ublcp1GL00450 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Ublcp1JF03179 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(3R)Exel6193 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{wHy}Ublcp1DG04502 NA PBac{WH}Ublcp1f00534 NA PBac{WH}Ublcp1f03776 NA PBac{WH}Ublcp1f04661 NA PBac{WH}Ublcp1f06785 NA PBac{WH}Ublcp1f06939 NA
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term Evidence References
phosphoprotein phosphatase activity inferred from electronic annotation with InterPro:IPR011943 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
nucleus inferred from electronic annotation with InterPro:IPR011943 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
Ublcp1 - CG10077 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - CG11266 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - CG15735 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - CG1785 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - CG3862 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - Fmr1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - Gnf1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - Imp anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - Jupiter anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - Map205 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - Mtpα anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - RpL35A anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - Rpb8 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - Rrp46 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - Rs1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - SmG anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - TFAM anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - Zn72D anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - ctp anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - mRpS24 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - mTerf3 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - mod anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Ublcp1 - nito anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Ublcp1 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 67671 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0027526 DroID - A comprehensive database of gene and protein interactions. • FBgn0027526 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42726
Orthologs
OrthoDB Orthologs (37) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6868ZJ Dipteran inclusive ortholog search EOG64J2SS Insect inclusive ortholog search EOG6GHXJZ Arthropod inclusive ortholog search EOG67M0DN Metazoa inclusive ortholog search EOG63C0GV
Orthologs in Drosophila Species (EOG6868ZJ)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Ublcp1     Drosophila sechellia   Dsec\GM26482 Y   Drosophila erecta   Dere\GG11183 Y   Drosophila yakuba   Dyak\GE10350 Y   Drosophila ananassae   Dana\GF16974 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA19790 Y   Drosophila persimilis   Dper\GL13660 Y   Drosophila willistoni   Dwil\GK14409 Y   Drosophila virilis   Dvir\GJ24610 Y   Drosophila mojavensis   Dmoj\GI23016 Y   Drosophila grimshawi   Dgri\GH23676 Y
Orthologs in non-Drosophila Dipterans (EOG64J2SS)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL003230   Anopheles gambiae Malaria mosquito  Agam\AGAP005270   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ801491
Orthologs in non-Dipteran Insects (EOG6GHXJZ)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\LOC725786   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG001969   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH20506   Atta cephalotes Leafcutter ant  Acep\ACEP22822   Camponotus floridanus Florida carpenter ant  Cflo\CFLO21176   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL16909   Linepithema humile Argentine ant  Lhum\LH18255   Pogonomyrmex barbatus Red harvester ant  Pbar\PB25369   Solenopsis invicta Red fire ant  Sinv\SINV18255   Acyrthosiphon pisum Pea aphid  Apim\ACYPI008191   Bombyx mori Silkmoth  Bmor\BGIBMGA014179   Pediculus humanus Human body louse  Phum\PHUM497920   Tribolium castaneum Red flour beetle  Tcas\TC030602
Orthologs in non-Insect Arthropods (EOG67M0DN)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_308510   Ixodes scapularis Deer tick  Isca\ISCW006674
Orthologs in non-Arthropod Metazoa (EOG63C0GV)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_013375gn   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_001087gn   Danio rerio Zebrafish  Drer\ublcp1   Xenopus tropicalis Western clawed frog  Xtro\ublcp1   Gallus gallus Domestic chicken  Ggal\UBLCP1   Mus musculus House mouse  Mmus\Ublcp1   Rattus norvegicus Norway rat  Rnor\Ublcp1   Homo sapiens Human  Hsap\UBLCP1
Human Orthologs (1)
Gene OMIM HGNC Hsap\UBLCP1
AAA Orthologs (10) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila sechellia Dsec\GM26482 Drosophila erecta Dere\GG11183 Drosophila yakuba Dyak\GE10350 Drosophila ananassae Dana\GF16974 Drosophila pseudoobscura pseudoobscura Dpse\GA19790 Drosophila persimilis Dper\GL13660 Drosophila willistoni Dwil\GK14409 Drosophila virilis Dvir\GJ24610 Drosophila mojavensis Dmoj\GI23016 Drosophila grimshawi Dgri\GH23676
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	28751 y1 v1; P{TRiP.JF03179}attP2 35610 y1 sc* v1; P{TRiP.GL00450}attP2/TM3, Sb1 20381 y1 w67c23; P{wHy}Ublcp1DG04502/TM3, Sb1 Ser1
Harvard	- PBac{WH}Ublcp1f00534 - PBac{WH}Ublcp1f03776
VDRC	v27719 w1118; P{GD12006}v27719
Genomic Clones ( 2 )
	BACR01K08 BACR17P04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 85 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD21504
Other clones	DPiM_LD21504
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT19028 GH04344 LD05231 LD11737 LD22356 LD23142 LD35915 LD41429 RE12555 RE17143 RE25456 RE37329 RE44349 RE52970 RE65449 RE65637 RE66005 RE66078 RH38989 RH47889 RH54634
Other clones	97196 172676 EK219418 FGM004G01 RP003010296 RP003032955 RP003034857 RP003037868 RP003046026 RP003046214 RP003057852 RP003062878 RP003074120 RP003078640 RP003083067 RP003092923 RP003124379 RP003136725 RP003141768 RP003148081 RP003156588 RP003161493 RP003165330 RP003168577 RP003172659 RP003176573 RP003183360 RP003192216 RP003192791 RP003205533 RP003205967 RP003209299 RP003221702 RP003226180 RP003246537 RP003273560 RP003312336 RP003328037 RP003330891 RP003334417 RP003360546 RP003363488 RP003386717 RP003399238 RP003420735 RP003427530 RP003437994 RP003443123 RP003455855 RP003521016 RP003522525 RP003529046 RP003562479 RP003564531 RP003588475 RP003593866 RP003612437 RP003645706 RP003649186 RP003654258 RP003671439 RP003673093
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0027526 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42726
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Ublcp1 CG6697 (Guo et al., 2011)
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_142861 RefSeq (Proteins) • NP_651118 DDBJ / EMBL / GenBank • AA735553 AAD34759 AAF56091 AF132171 AI455158 CZ482997 CZ486366 CZ487206 CZ487207 CZ489509 CZ489680 Entrez Gene - A searchable database of RefSeq genes. • 42726 UniProtKB/TrEMBL • Q9XZ16
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Ubiquitin (IPR000626) NLI interacting factor (IPR004274) HAD-superfamily hydrolase, subfamily IIID (IPR011943) Ubiquitin supergroup (IPR019955) HAD-like domain (IPR023214) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LD21504
Linkouts
	BioGRID - A database of protein and genetic interactions • 67671 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0027526 DroID - A comprehensive database of gene and protein interactions. • FBgn0027526 DRSC - Results from RNAi screens. • FBgn0027526 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0027526 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6697-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0027526 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 42726 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 42726 modMine - Data generated by the modENCODE project. • FBgn0027526
Synonyms & Secondary IDs ( 6 )
Reported As
Symbol Synonym	BcDNA:LD21504 (Giot et al., 2003, ) CG6697 (Quinones-Coello, 2007, Lundgren et al., 2005, Ni et al., 2011.7.19, Perkins et al., 2009) DmUBLCP1 (Guo et al., 2011) UBLCP1 (Guo et al., 2011) Ublcp1
Name Synonym	Ubiquitin-like domain-containing C-terminal domain phosphatase 1
Secondary FlyBase IDs
References ( 19 )
Research paper	Guo et al., 2011, Proc. Natl. Acad. Sci. U.S.A. 108(46): 18649--18654 UBLCP1 is a 26S proteasome phosphatase that regulates nuclear proteasome activity. [FBrf0217344] Lundgren et al., 2005, Mol. Cell. Biol. 25(11): 4662--4675 Identification and characterization of a Drosophila proteasome regulatory network. [FBrf0188596]
Supplementary material	Graveley et al., 2011, Nature 471(7339): Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Quinones-Coello, 2007, Genetics 175(3): Supplemental Table 1. List of genes associated with protein or enhancer traps. [FBrf0200393] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
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