A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\l(1)G0232

General Information
SymbolDmel\l(1)G0232SpeciesD. melanogaster
Namelethal (1) G0232Annotation symbolCG32697
Feature typeprotein_coding_geneFlyBase IDFBgn0028341
Gene Model StatusCurrent Stock availability 24 publicly available
Also Known AsCG3101
Genomic Location
Chromosome (arm)XRecombination map
Cytogenetic map8F2-8F6Sequence locationX:9,522,755..9,552,947 [-]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene lethal (1) G0232 is referred to in FlyBase by the symbol Dmel\l(1)G0232 (CG32697, FBgn0028341). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: non-membrane spanning protein tyrosine phosphatase activity. There is experimental evidence that it is involved in the biological process: neurogenesis; phagocytosis, engulfment. 29 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum. It has 8 annotated transcripts and 8 annotated polypeptides. Protein features are: Cellular retinaldehyde-binding/triple function, C-terminal; Protein-tyrosine phosphatase, active site; Protein-tyrosine phosphatase, receptor/non-receptor type; Protein-tyrosine/Dual-specificity phosphatase. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed at stages throughout embryogenesis, during early pupal stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, larval fat body, larval/adult salivary gland, larval trachea, adult ovary, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1633682_a_at completely aligns to an exonic region common to each of the 8 FlyBase-annotated transcript isoforms of l(1)G0232. Gene sequence location is X:9522755..9552947.

hide Recent Updates
Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
Update Feed
Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
References
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
8F2-8F6  
Limits computationally determined from genome sequence between P{EP}EP912EP912 and P{EP}nejEP1149&P{EP}nejEP1179  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
8F3-8F5  
(determined by in situ hybridisation)  
8F3-8F7  
(determined by in situ hybridisation)  
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\l(1)G0232 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0100192 FBtr0303559 FBtr0071407 FBtr0071406 FBtr0303558 FBtr0071405 FBtr0071404 FBtr0100193 FBtr0071403 FBpp0099558 FBpp0292592 FBpp0099557 FBpp0099559 FBpp0099555 FBpp0292591 FBpp0099554 FBpp0099556 FBpp0071338 FBti0078325 FBti0042580 FBti0065372 FBti0064963 FBti0043616 FBti0104806 FBti0048402 FBti0143235 FBti0111217 FBti0068969 FBti0013947 FBti0070356 FBti0068697 FBti0053961 FBti0049938 FBti0071924 FBti0048222 FBti0057267 FBti0076102 FBti0054470 FBti0049182 FBti0053800 FBti0049157 FBti0143722 FBti0143553 FBti0071639 FBti0056687 FBti0056957
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0071405
  3046
  827
FBtr0071406
  2969
  802
FBtr0071404
  2822
  797
FBtr0071407
  2474
  498
FBtr0100192
  2485
  498
FBtr0100193
  2988
  597
FBtr0303558
  3241
  790
FBtr0303559
  2488
  498
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0099554  
89.3  
827  
6.88  
FBpp0099555  
86.5  
802  
6.98  
FBpp0099556  
85.8  
797  
6.43  
FBpp0099557  
53.3  
498  
4.86  
FBpp0099558  
53.3  
498  
4.86  
FBpp0099559  
64.6  
597  
6.35  
FBpp0292591  
84.9  
790  
6.68  
FBpp0292592  
53.3  
498  
4.86  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view l(1)G0232-RE l(1)G0232-RH l(1)G0232-RD l(1)G0232-RB l(1)G0232-RG l(1)G0232-RA l(1)G0232-RC l(1)G0232-RF CG3106-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0028341


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0028341
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed at stages throughout embryogenesis, during early pupal stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0028341 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 8972
embryo 02-04hr
 
 7570
embryo 04-06hr
 
 3169
embryo 06-08hr
 
 3654
embryo 08-10hr
 
 4651
embryo 10-12hr
 
 5660
embryo 12-14hr
 
 3716
embryo 14-16hr
 
 7209
embryo 16-18hr
 
 4370
embryo 18-20hr
 
 3347
embryo 20-22hr
 
 4310
embryo 22-24hr
 
 3380
larva L1
 
 1599
larva L2
 
 1442
larva L3 12hr old
 
 1053
larva L3 puffstage 1-2
 
 1001
larva L3 puffstage 3-6
 
 2285
larva L3 puffstage 7-9
 
 3171
white prepupae new
 
 3636
white prepupae 12hr
 
 4755
white prepupae 24hr
 
 3142
pupae 2d postWPP
 
 2811
pupae 3d postWPP
 
 1687
pupae 4d postWPP
 
 2915
adult male 01day
 
 2148
adult male 05day
 
 2499
adult male 30day
 
 2628
adult female 01day
 
 3202
adult female 05day
 
 3389
adult female 30day
 
 3763
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (8972)
embryo 02-04hr
 (7570)
embryo 04-06hr
 (3169)
embryo 06-08hr
 (3654)
embryo 08-10hr
 (4651)
embryo 10-12hr
 (5660)
embryo 12-14hr
 (3716)
embryo 14-16hr
 (7209)
embryo 16-18hr
 (4370)
embryo 18-20hr
 (3347)
embryo 20-22hr
 (4310)
embryo 22-24hr
 (3380)
larva L1
 (1599)
larva L2
 (1442)
larva L3 12hr old
 (1053)
larva L3 puffstage 1-2
 (1001)
larva L3 puffstage 3-6
 (2285)
larva L3 puffstage 7-9
 (3171)
white prepupae new
 (3636)
white prepupae 12hr
 (4755)
white prepupae 24hr
 (3142)
pupae 2d postWPP
 (2811)
pupae 3d postWPP
 (1687)
pupae 4d postWPP
 (2915)
adult male 01day
 (2148)
adult male 05day
 (2499)
adult male 30day
 (2628)
adult female 01day
 (3202)
adult female 05day
 (3389)
adult female 30day
 (3763)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (8972)
embryo 02-04hr
 (7570)
embryo 04-06hr
 (3169)
embryo 06-08hr
 (3654)
embryo 08-10hr
 (4651)
embryo 10-12hr
 (5660)
embryo 12-14hr
 (3716)
embryo 14-16hr
 (7209)
embryo 16-18hr
 (4370)
embryo 18-20hr
 (3347)
embryo 20-22hr
 (4310)
embryo 22-24hr
 (3380)
larva L1
 (1599)
larva L2
 1442
larva L3 12hr old
 
 1053
larva L3 puffstage 1-2
 
 1001
larva L3 puffstage 3-6
 (2285)
larva L3 puffstage 7-9
 (3171)
white prepupae new
 (3636)
white prepupae 12hr
 (4755)
white prepupae 24hr
 (3142)
pupae 2d postWPP
 (2811)
pupae 3d postWPP
 (1687)
pupae 4d postWPP
 (2915)
adult male 01day
 (2148)
adult male 05day
 (2499)
adult male 30day
 (2628)
adult female 01day
 (3202)
adult female 05day
 (3389)
adult female 30day
 (3763)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 8972
embryo 02-04hr
 
 7570
embryo 04-06hr
 
 3169
embryo 06-08hr
 
 3654
embryo 08-10hr
 
 4651
embryo 10-12hr
 
 5660
embryo 12-14hr
 
 3716
embryo 14-16hr
 
 7209
embryo 16-18hr
 
 4370
embryo 18-20hr
 
 3347
embryo 20-22hr
 
 4310
embryo 22-24hr
 
 3380
larva L1
 
 1599
larva L2
 
 1442
larva L3 12hr old
 
 1053
larva L3 puffstage 1-2
 
 1001
larva L3 puffstage 3-6
 
 2285
larva L3 puffstage 7-9
 
 3171
white prepupae new
 
 3636
white prepupae 12hr
 
 4755
white prepupae 24hr
 
 3142
pupae 2d postWPP
 
 2811
pupae 3d postWPP
 
 1687
pupae 4d postWPP
 
 2915
adult male 01day
 
 2148
adult male 05day
 
 2499
adult male 30day
 
 2628
adult female 01day
 
 3202
adult female 05day
 
 3389
adult female 30day
 
 3763
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 8972
embryo 02-04hr
 
 7570
embryo 04-06hr
 
 3169
embryo 06-08hr
 
 3654
embryo 08-10hr
 
 4651
embryo 10-12hr
 
 5660
embryo 12-14hr
 
 3716
embryo 14-16hr
 
 7209
embryo 16-18hr
 
 4370
embryo 18-20hr
 
 3347
embryo 20-22hr
 
 4310
embryo 22-24hr
 
 3380
larva L1
 
 1599
larva L2
 
 1442
larva L3 12hr old
 
 1053
larva L3 puffstage 1-2
 
 1001
larva L3 puffstage 3-6
 
 2285
larva L3 puffstage 7-9
 
 3171
white prepupae new
 
 3636
white prepupae 12hr
 
 4755
white prepupae 24hr
 
 3142
pupae 2d postWPP
 
 2811
pupae 3d postWPP
 
 1687
pupae 4d postWPP
 
 2915
adult male 01day
 
 2148
adult male 05day
 
 2499
adult male 30day
 
 2628
adult female 01day
 
 3202
adult female 05day
 
 3389
adult female 30day
 
 3763
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0028341 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 8972
embryo 02-04hr
 
 7570
embryo 04-06hr
 
 3169
embryo 06-08hr
 
 3654
embryo 08-10hr
 
 4651
embryo 10-12hr
 
 5660
embryo 12-14hr
 
 3716
embryo 14-16hr
 
 7209
embryo 16-18hr
 
 4370
embryo 18-20hr
 
 3347
embryo 20-22hr
 
 4310
embryo 22-24hr
 
 3380
larva L1
 
 1599
larva L2
 
 1442
larva L3 12hr old
 
 1053
larva L3 puffstage 1-2
 
 1001
larva L3 puffstage 3-6
 
 2285
larva L3 puffstage 7-9
 
 3171
white prepupae new
 
 3636
white prepupae 12hr
 
 4755
white prepupae 24hr
 
 3142
pupae 2d postWPP
 
 2811
pupae 3d postWPP
 
 1687
pupae 4d postWPP
 
 2915
adult male 01day
 
 2148
adult male 05day
 
 2499
adult male 30day
 
 2628
adult female 01day
 
 3202
adult female 05day
 
 3389
adult female 30day
 
 3763
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (8972)
embryo 02-04hr
 (7570)
embryo 04-06hr
 (3169)
embryo 06-08hr
 (3654)
embryo 08-10hr
 (4651)
embryo 10-12hr
 (5660)
embryo 12-14hr
 (3716)
embryo 14-16hr
 (7209)
embryo 16-18hr
 (4370)
embryo 18-20hr
 (3347)
embryo 20-22hr
 (4310)
embryo 22-24hr
 (3380)
larva L1
 (1599)
larva L2
 (1442)
larva L3 12hr old
 (1053)
larva L3 puffstage 1-2
 (1001)
larva L3 puffstage 3-6
 (2285)
larva L3 puffstage 7-9
 (3171)
white prepupae new
 (3636)
white prepupae 12hr
 (4755)
white prepupae 24hr
 (3142)
pupae 2d postWPP
 (2811)
pupae 3d postWPP
 (1687)
pupae 4d postWPP
 (2915)
adult male 01day
 (2148)
adult male 05day
 (2499)
adult male 30day
 (2628)
adult female 01day
 (3202)
adult female 05day
 (3389)
adult female 30day
 (3763)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (8972)
embryo 02-04hr
 (7570)
embryo 04-06hr
 (3169)
embryo 06-08hr
 (3654)
embryo 08-10hr
 (4651)
embryo 10-12hr
 (5660)
embryo 12-14hr
 (3716)
embryo 14-16hr
 (7209)
embryo 16-18hr
 (4370)
embryo 18-20hr
 (3347)
embryo 20-22hr
 (4310)
embryo 22-24hr
 (3380)
larva L1
 1599
larva L2
 1442
larva L3 12hr old
 
 1053
larva L3 puffstage 1-2
 
 1001
larva L3 puffstage 3-6
 2285
larva L3 puffstage 7-9
 (3171)
white prepupae new
 (3636)
white prepupae 12hr
 (4755)
white prepupae 24hr
 (3142)
pupae 2d postWPP
 (2811)
pupae 3d postWPP
 1687
pupae 4d postWPP
 (2915)
adult male 01day
 2148
adult male 05day
 (2499)
adult male 30day
 (2628)
adult female 01day
 (3202)
adult female 05day
 (3389)
adult female 30day
 (3763)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 8972
embryo 02-04hr
 
 7570
embryo 04-06hr
 
 3169
embryo 06-08hr
 
 3654
embryo 08-10hr
 
 4651
embryo 10-12hr
 
 5660
embryo 12-14hr
 
 3716
embryo 14-16hr
 
 7209
embryo 16-18hr
 
 4370
embryo 18-20hr
 
 3347
embryo 20-22hr
 
 4310
embryo 22-24hr
 
 3380
larva L1
 
 1599
larva L2
 
 1442
larva L3 12hr old
 
 1053
larva L3 puffstage 1-2
 
 1001
larva L3 puffstage 3-6
 
 2285
larva L3 puffstage 7-9
 
 3171
white prepupae new
 
 3636
white prepupae 12hr
 
 4755
white prepupae 24hr
 
 3142
pupae 2d postWPP
 
 2811
pupae 3d postWPP
 
 1687
pupae 4d postWPP
 
 2915
adult male 01day
 
 2148
adult male 05day
 
 2499
adult male 30day
 
 2628
adult female 01day
 
 3202
adult female 05day
 
 3389
adult female 30day
 
 3763
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 8972
embryo 02-04hr
 
 7570
embryo 04-06hr
 
 3169
embryo 06-08hr
 
 3654
embryo 08-10hr
 
 4651
embryo 10-12hr
 
 5660
embryo 12-14hr
 
 3716
embryo 14-16hr
 
 7209
embryo 16-18hr
 
 4370
embryo 18-20hr
 
 3347
embryo 20-22hr
 
 4310
embryo 22-24hr
 
 3380
larva L1
 
 1599
larva L2
 
 1442
larva L3 12hr old
 
 1053
larva L3 puffstage 1-2
 
 1001
larva L3 puffstage 3-6
 
 2285
larva L3 puffstage 7-9
 
 3171
white prepupae new
 
 3636
white prepupae 12hr
 
 4755
white prepupae 24hr
 
 3142
pupae 2d postWPP
 
 2811
pupae 3d postWPP
 
 1687
pupae 4d postWPP
 
 2915
adult male 01day
 
 2148
adult male 05day
 
 2499
adult male 30day
 
 2628
adult female 01day
 
 3202
adult female 05day
 
 3389
adult female 30day
 
 3763
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0028341


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0028341
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, larval fat body, larval/adult salivary gland, larval trachea, adult ovary, adult male reproductive system, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0028341 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 109.9
Larval Midgut
 
 237.6
Larval Hindgut
 
 153.5
Larval Malpighian Tubules
 
 518.3
Larval Fat Body
 
 306.6
Larval Salivary Gland
 
 152.6
Larval Trachea
 
 163.325
Larval Carcass
 
 156.325
Adult Head
 
 93.3
Adult Eye
 
 291.475
Adult Brain
 
 204.9
Adult Thoracic-Abdominal Ganglion
 
 148.1
Adult Crop
 
 178.6
Adult Midgut
 
 159.2
Adult Hindgut
 
 137.5
Adult Malpighian Tubules
 
 377
Adult Fat Body
 
 87.5
Adult Salivary Gland
 
 195.4
Adult Heart
 
 201
Adult VirginFemale Spermatheca
 
 72.3
Adult InseminatedFemale Spermatheca
 
 77.6
Adult Ovary
 
 469.1
Adult Testis
 
 228.5
Adult Male Accessory Gland
 
 140.9
Adult Carcass
 
 139.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.9
Larval Midgut
 
 237.6
Larval Hindgut
 
 153.5
Larval Malpighian Tubules
 518.3
Larval Fat Body
 
 306.6
Larval Salivary Gland
 
 152.6
Larval Trachea
 
 163.325
Larval Carcass
 
 156.325
Adult Head
 
 93.3
Adult Eye
 
 291.475
Adult Brain
 
 204.9
Adult Thoracic-Abdominal Ganglion
 
 148.1
Adult Crop
 
 178.6
Adult Midgut
 
 159.2
Adult Hindgut
 
 137.5
Adult Malpighian Tubules
 
 377
Adult Fat Body
 
 87.5
Adult Salivary Gland
 
 195.4
Adult Heart
 
 201
Adult VirginFemale Spermatheca
 
 72.3
Adult InseminatedFemale Spermatheca
 
 77.6
Adult Ovary
 
 469.1
Adult Testis
 
 228.5
Adult Male Accessory Gland
 
 140.9
Adult Carcass
 
 139.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.9
Larval Midgut
 
 237.6
Larval Hindgut
 
 153.5
Larval Malpighian Tubules
 
 518.3
Larval Fat Body
 
 306.6
Larval Salivary Gland
 
 152.6
Larval Trachea
 
 163.325
Larval Carcass
 
 156.325
Adult Head
 
 93.3
Adult Eye
 
 291.475
Adult Brain
 
 204.9
Adult Thoracic-Abdominal Ganglion
 
 148.1
Adult Crop
 
 178.6
Adult Midgut
 
 159.2
Adult Hindgut
 
 137.5
Adult Malpighian Tubules
 
 377
Adult Fat Body
 
 87.5
Adult Salivary Gland
 
 195.4
Adult Heart
 
 201
Adult VirginFemale Spermatheca
 
 72.3
Adult InseminatedFemale Spermatheca
 
 77.6
Adult Ovary
 
 469.1
Adult Testis
 
 228.5
Adult Male Accessory Gland
 
 140.9
Adult Carcass
 
 139.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.9
Larval Midgut
 
 237.6
Larval Hindgut
 
 153.5
Larval Malpighian Tubules
 
 518.3
Larval Fat Body
 
 306.6
Larval Salivary Gland
 
 152.6
Larval Trachea
 
 163.325
Larval Carcass
 
 156.325
Adult Head
 
 93.3
Adult Eye
 
 291.475
Adult Brain
 
 204.9
Adult Thoracic-Abdominal Ganglion
 
 148.1
Adult Crop
 
 178.6
Adult Midgut
 
 159.2
Adult Hindgut
 
 137.5
Adult Malpighian Tubules
 
 377
Adult Fat Body
 
 87.5
Adult Salivary Gland
 
 195.4
Adult Heart
 
 201
Adult VirginFemale Spermatheca
 
 72.3
Adult InseminatedFemale Spermatheca
 
 77.6
Adult Ovary
 
 469.1
Adult Testis
 
 228.5
Adult Male Accessory Gland
 
 140.9
Adult Carcass
 
 139.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0028341 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 109.9
Larval Midgut
 
 237.6
Larval Hindgut
 
 153.5
Larval Malpighian Tubules
 
 518.3
Larval Fat Body
 
 306.6
Larval Salivary Gland
 
 152.6
Larval Trachea
 
 163.325
Larval Carcass
 
 156.325
Adult Head
 
 93.3
Adult Eye
 
 291.475
Adult Brain
 
 204.9
Adult Thoracic-Abdominal Ganglion
 
 148.1
Adult Crop
 
 178.6
Adult Midgut
 
 159.2
Adult Hindgut
 
 137.5
Adult Malpighian Tubules
 
 377
Adult Fat Body
 
 87.5
Adult Salivary Gland
 
 195.4
Adult Heart
 
 201
Adult VirginFemale Spermatheca
 
 72.3
Adult InseminatedFemale Spermatheca
 
 77.6
Adult Ovary
 
 469.1
Adult Testis
 
 228.5
Adult Male Accessory Gland
 
 140.9
Adult Carcass
 
 139.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.9
Larval Midgut
 
 237.6
Larval Hindgut
 
 153.5
Larval Malpighian Tubules
 518.3
Larval Fat Body
 
 306.6
Larval Salivary Gland
 
 152.6
Larval Trachea
 
 163.325
Larval Carcass
 
 156.325
Adult Head
 
 93.3
Adult Eye
 
 291.475
Adult Brain
 
 204.9
Adult Thoracic-Abdominal Ganglion
 
 148.1
Adult Crop
 
 178.6
Adult Midgut
 
 159.2
Adult Hindgut
 
 137.5
Adult Malpighian Tubules
 
 377
Adult Fat Body
 
 87.5
Adult Salivary Gland
 
 195.4
Adult Heart
 
 201
Adult VirginFemale Spermatheca
 
 72.3
Adult InseminatedFemale Spermatheca
 
 77.6
Adult Ovary
 
 469.1
Adult Testis
 
 228.5
Adult Male Accessory Gland
 
 140.9
Adult Carcass
 
 139.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.9
Larval Midgut
 
 237.6
Larval Hindgut
 
 153.5
Larval Malpighian Tubules
 
 518.3
Larval Fat Body
 
 306.6
Larval Salivary Gland
 
 152.6
Larval Trachea
 
 163.325
Larval Carcass
 
 156.325
Adult Head
 
 93.3
Adult Eye
 
 291.475
Adult Brain
 
 204.9
Adult Thoracic-Abdominal Ganglion
 
 148.1
Adult Crop
 
 178.6
Adult Midgut
 
 159.2
Adult Hindgut
 
 137.5
Adult Malpighian Tubules
 
 377
Adult Fat Body
 
 87.5
Adult Salivary Gland
 
 195.4
Adult Heart
 
 201
Adult VirginFemale Spermatheca
 
 72.3
Adult InseminatedFemale Spermatheca
 
 77.6
Adult Ovary
 
 469.1
Adult Testis
 
 228.5
Adult Male Accessory Gland
 
 140.9
Adult Carcass
 
 139.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 109.9
Larval Midgut
 
 237.6
Larval Hindgut
 
 153.5
Larval Malpighian Tubules
 
 518.3
Larval Fat Body
 
 306.6
Larval Salivary Gland
 
 152.6
Larval Trachea
 
 163.325
Larval Carcass
 
 156.325
Adult Head
 
 93.3
Adult Eye
 
 291.475
Adult Brain
 
 204.9
Adult Thoracic-Abdominal Ganglion
 
 148.1
Adult Crop
 
 178.6
Adult Midgut
 
 159.2
Adult Hindgut
 
 137.5
Adult Malpighian Tubules
 
 377
Adult Fat Body
 
 87.5
Adult Salivary Gland
 
 195.4
Adult Heart
 
 201
Adult VirginFemale Spermatheca
 
 72.3
Adult InseminatedFemale Spermatheca
 
 77.6
Adult Ovary
 
 469.1
Adult Testis
 
 228.5
Adult Male Accessory Gland
 
 140.9
Adult Carcass
 
 139.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 93.3
 
NA 
Eye
 
 291.475
 
NA 
Brain
 
 204.9
 
109.9 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 148.1
 
NA 
Crop
 
 178.6
 
237.6 
Midgut
 
 159.2
 
153.5 
Hindgut
 
 137.5
 
518.3 
Malpighian Tubules
 
 377
 
306.6 
Fat Body
 
 87.5
 
152.6 
Salivary Gland
 
 195.4
 
NA 
Heart
 
 201
 
163.325 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 72.3
 
NA 
InseminatedFemale Spermatheca
 
 77.6
 
NA 
Ovary
 
 469.1
 
NA 
Testis
 
 228.5
 
NA 
Male Accessory Gland
 
 140.9
 
156.325 
Carcass
 
 139.3

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 25 )
For All Classical Alleles Show

Allele of l(1)G0232ClassMutagenStocksKnown lesion
l(1)G0232f066002 --
l(1)G0232G02322 --
l(1)G0232c013931 --
l(1)G0232c030741 --
l(1)G0232d002331 --
l(1)G0232d013951 --
l(1)G0232d086531 --
l(1)G0232d098351 --
l(1)G0232d11353
1 --
l(1)G0232e033191 --
l(1)G0232e03628
1 --
l(1)G0232EY229131 --
l(1)G0232f002291 --
l(1)G0232f002671 --
l(1)G0232f014091 --
l(1)G0232f080361 --
l(1)G0232GG011291 --
l(1)G0232MI03011
1 --
l(1)G0232c013950 --
l(1)G0232CPTI0027500 Yes
l(1)G0232CPTI0037060 Yes
l(1)G0232d022240 --
l(1)G0232d040060 --
l(1)G0232d101180 --
l(1)G0232GG01417
0 --
hide Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show

Allele of l(1)G0232ClassMutagenStocksKnown lesion
l(1)G0232GD101302 Yes
l(1)G0232GD101351 Yes
l(1)G0232KK1087231 Yes
l(1)G0232HMS007310 Yes
hide Aneuploid Aberrations
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
Insertions
Type of insertions
Name
Expression data
insertion of enhancer trap
hide Gene Ontology: Function, Process & Cellular Component ( 5 unique terms )
hide Terms Based on Experimental Evidence ( 2 terms )
Molecular Function ( 0 terms)
Biological Process
CV term
References
inferred from mutant phenotype
Cellular Component ( 0 terms)
hide Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term
References
Biological Process
CV term
References
inferred from electronic annotation with InterPro:IPR000242
non-traceable author statement
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
l(1)G0232 allele
Gene
References
hide External Data
Linkouts
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 24 )
Harvard
VDRC
hide Genomic Clones ( 2 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 137 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: CG3101 CG3102
Source for merge of: l(1)G0232 CG32697
Additional comments
Annotations CG3101, CG3102 merged as CG32697 in release 3 of the genome annotation.
hide Other Comments
S2 cells treated with dsRNA generated against this gene show reduced phagocytosis of Candida albicans compared to untreated cells.
dsRNA made from templates generated with primers directed against this gene tested in RNAi screen for effects on Kc167 and S2R+ cell morphology.
EST LP08165 is chimeric; the 5' portion matches part of AE on the opposite strand to l(1)G0232, the 3' portion corresponds to part of CG31775.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 8 )
Reported As
Symbol Synonym
l(1)G0232
 
L(1)G0232
Name Synonym
lethal (1) G0232
 
Secondary FlyBase IDs
  • FBgn0030146
  • FBgn0030147
  • FBgn0052697
hide References ( 34 )
Generate a list of
List References by type
hide Recent research papers ( 1 )
Horn et al., 2011, Nat. Methods 8(4): 341--346
Mapping of signaling networks through synthetic genetic interaction analysis by RNAi. [FBrf0213352]