Gene Dmel\CG15293

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General Information

Symbol

Dmel\CG15293

Species

D. melanogaster

Name

Annotation symbol

CG15293

Feature type

protein_coding_gene

FlyBase ID

FBgn0028526

Gene Model Status

Current

Stock availability

3 publicly available

Also Known As

BG:DS01759.2

Genomic Location

Chromosome (arm)

Recombination map

Cytogenetic map

34F4-34F4

Sequence location

2L:14,108,057..14,109,304 [-]

Genomic Maps

Select View:

Summary Information

Automatically generated summary

See sections below for more information

This gene is referred to in FlyBase by the symbol Dmel\CG15293 (FBgn0028526). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of no expression detected. Peak expression observed at stages throughout the larval period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult heart, adult fat body, adult spermathecae, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult central nervous system, adult hindgut, larval fat body. Comments on Affy2 ProbeSet: ProbeSet 1630844_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG15293. Gene sequence location is 2L:14108057..14109304.

User Contributed Data

Beta version, feedback welcome

Recent Updates

Description

What does this section display?

This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).

What does this section not display?

This section does not currently display links that were removed or gene model changes.

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FB2013_03

FB2013_02

All updates

Click here to see a list of all updates to this record from FB2010_08 and on.

Detailed Mapping Data

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

34F4-34F4

Limits computationally determined from genome sequence between P{lacW}l(2)34Fa^k00811&P{PZ}wb⁰⁹⁴³⁷ and P{EP}elB^EP2039&P{PZ}osp^rJ571

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

Left of (cM)

Right of (cM)

Notes

Gene Model & Products

Please see the GBrowse view of Dmel\CG15293 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Comments on Gene Model

Gene model reviewed during 5.44

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Associated CDS (aa)

CG15293-RA

FBtr0080603

NM_135858

1194

333

Additional Transcript Data & Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank protein

CG15293-PA

FBpp0080177

36.7

333

8.39

NP_609702

AAF53376

Additional Polypeptide Data & Comments

Reported size (kDa)

Comments

External Data

Linkouts

Crossreferences

Sequences Consistent with the Gene Model

DDBJ /
EMBL /
GenBank

DNA sequence

Protein sequence

Name

Q9V3Y7

Mapped Features

Mapped Features have been reorganized, please see this article for details.

Additional mapped features and mutations can be found on GBrowse or related reports.

Type

Symbol & Location

Additional Notes

References

External Data

Linkouts

Crossreferences

Expression Data

Transcript Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

day 7 of adulthood -- day 49 of adulthood

adult heart

(Cammarato et al., 2011)

Additional Descriptive Data

Marker for

Subcellular Localization (GO Cellular Component)

CV term

Evidence

References

extracellular region

inferred from direct assay

(Karlsson et al., 2004)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

Reference

See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)

	Styles
	Linear
	Logarithmic
	Heatmap
	Back-to-back
	Scales
	gene max expression
	Moderate expression bin max
	High level expression bin max
	Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult heart, adult fat body, adult spermathecae, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult central nervous system, adult hindgut, larval fat body.
[download data (TSV)]

Guide to FlyAtlas expression level colors
	No expression (0 - 9.999)
	Low expression (10 - 99.999)
	Moderate expression (100 - 499.999)
	High level expression (500 - 999.999)
	Very high expression (>999.999)

Linear, scaled to maximum expression level
Tissue		Expression Level
Larval Central Nervous System		6.425
Larval Midgut		15.2
Larval Hindgut		93
Larval Malpighian Tubules		8.1
Larval Fat Body		416
Larval Salivary Gland		40
Larval Trachea		57.275
Larval Carcass		27.025
Adult Head		3050
Adult Eye		1762.375
Adult Brain		120.5
Adult Thoracic-Abdominal Ganglion		111.2
Adult Crop		94.6
Adult Midgut		10.2
Adult Hindgut		368.7
Adult Malpighian Tubules		85.3
Adult Fat Body		5157.8
Adult Salivary Gland		14.3
Adult Heart		4634.45
Adult VirginFemale Spermatheca		4092.6
Adult InseminatedFemale Spermatheca		2997
Adult Ovary		3.2
Adult Testis		4.7
Adult Male Accessory Gland		11.9
Adult Carcass		3608.8
Expression Level Scale		None Low Moderate High Very high

Linear, scaled to Moderate expression
Tissue		Expression Level
Larval Central Nervous System		6.425
Larval Midgut		15.2
Larval Hindgut		93
Larval Malpighian Tubules		8.1
Larval Fat Body		416
Larval Salivary Gland		40
Larval Trachea		57.275
Larval Carcass		27.025
Adult Head		(3050)
Adult Eye		(1762.375)
Adult Brain		120.5
Adult Thoracic-Abdominal Ganglion		111.2
Adult Crop		94.6
Adult Midgut		10.2
Adult Hindgut		368.7
Adult Malpighian Tubules		85.3
Adult Fat Body		(5157.8)
Adult Salivary Gland		14.3
Adult Heart		(4634.45)
Adult VirginFemale Spermatheca		(4092.6)
Adult InseminatedFemale Spermatheca		(2997)
Adult Ovary		3.2
Adult Testis		4.7
Adult Male Accessory Gland		11.9
Adult Carcass		(3608.8)
Expression Level Scale		None Low Moderate High

Linear, scaled to High level expression
Tissue		Expression Level
Larval Central Nervous System		6.425
Larval Midgut		15.2
Larval Hindgut		93
Larval Malpighian Tubules		8.1
Larval Fat Body		416
Larval Salivary Gland		40
Larval Trachea		57.275
Larval Carcass		27.025
Adult Head		(3050)
Adult Eye		(1762.375)
Adult Brain		120.5
Adult Thoracic-Abdominal Ganglion		111.2
Adult Crop		94.6
Adult Midgut		10.2
Adult Hindgut		368.7
Adult Malpighian Tubules		85.3
Adult Fat Body		(5157.8)
Adult Salivary Gland		14.3
Adult Heart		(4634.45)
Adult VirginFemale Spermatheca		(4092.6)
Adult InseminatedFemale Spermatheca		(2997)
Adult Ovary		3.2
Adult Testis		4.7
Adult Male Accessory Gland		11.9
Adult Carcass		(3608.8)
Expression Level Scale		None Low Moderate High Very high

Linear, scaled to Very high expression
Tissue		Expression Level
Larval Central Nervous System		6.425
Larval Midgut		15.2
Larval Hindgut		93
Larval Malpighian Tubules		8.1
Larval Fat Body		416
Larval Salivary Gland		40
Larval Trachea		57.275
Larval Carcass		27.025
Adult Head		3050
Adult Eye		1762.375
Adult Brain		120.5
Adult Thoracic-Abdominal Ganglion		111.2
Adult Crop		94.6
Adult Midgut		10.2
Adult Hindgut		368.7
Adult Malpighian Tubules		85.3
Adult Fat Body		5157.8
Adult Salivary Gland		14.3
Adult Heart		4634.45
Adult VirginFemale Spermatheca		4092.6
Adult InseminatedFemale Spermatheca		2997
Adult Ovary		3.2
Adult Testis		4.7
Adult Male Accessory Gland		11.9
Adult Carcass		3608.8
Expression Level Scale		Very high

log, scaled to maximum expression level
Tissue		Expression Level
Larval Central Nervous System		6.425
Larval Midgut		15.2
Larval Hindgut		93
Larval Malpighian Tubules		8.1
Larval Fat Body		416
Larval Salivary Gland		40
Larval Trachea		57.275
Larval Carcass		27.025
Adult Head		3050
Adult Eye		1762.375
Adult Brain		120.5
Adult Thoracic-Abdominal Ganglion		111.2
Adult Crop		94.6
Adult Midgut		10.2
Adult Hindgut		368.7
Adult Malpighian Tubules		85.3
Adult Fat Body		5157.8
Adult Salivary Gland		14.3
Adult Heart		4634.45
Adult VirginFemale Spermatheca		4092.6
Adult InseminatedFemale Spermatheca		2997
Adult Ovary		3.2
Adult Testis		4.7
Adult Male Accessory Gland		11.9
Adult Carcass		3608.8
Expression Level Scale		None Low Moderate High Very high

log, scaled to Moderate expression
Tissue		Expression Level
Larval Central Nervous System		6.425
Larval Midgut		15.2
Larval Hindgut		93
Larval Malpighian Tubules		8.1
Larval Fat Body		416
Larval Salivary Gland		40
Larval Trachea		57.275
Larval Carcass		27.025
Adult Head		(3050)
Adult Eye		(1762.375)
Adult Brain		120.5
Adult Thoracic-Abdominal Ganglion		111.2
Adult Crop		94.6
Adult Midgut		10.2
Adult Hindgut		368.7
Adult Malpighian Tubules		85.3
Adult Fat Body		(5157.8)
Adult Salivary Gland		14.3
Adult Heart		(4634.45)
Adult VirginFemale Spermatheca		(4092.6)
Adult InseminatedFemale Spermatheca		(2997)
Adult Ovary		3.2
Adult Testis		4.7
Adult Male Accessory Gland		11.9
Adult Carcass		(3608.8)
Expression Level Scale		None Low Moderate High

log, scaled to High level expression
Tissue		Expression Level
Larval Central Nervous System		6.425
Larval Midgut		15.2
Larval Hindgut		93
Larval Malpighian Tubules		8.1
Larval Fat Body		416
Larval Salivary Gland		40
Larval Trachea		57.275
Larval Carcass		27.025
Adult Head		(3050)
Adult Eye		(1762.375)
Adult Brain		120.5
Adult Thoracic-Abdominal Ganglion		111.2
Adult Crop		94.6
Adult Midgut		10.2
Adult Hindgut		368.7
Adult Malpighian Tubules		85.3
Adult Fat Body		(5157.8)
Adult Salivary Gland		14.3
Adult Heart		(4634.45)
Adult VirginFemale Spermatheca		(4092.6)
Adult InseminatedFemale Spermatheca		(2997)
Adult Ovary		3.2
Adult Testis		4.7
Adult Male Accessory Gland		11.9
Adult Carcass		(3608.8)
Expression Level Scale		None Low Moderate High Very high

log, scaled to Very high expression
Tissue		Expression Level
Larval Central Nervous System		6.425
Larval Midgut		15.2
Larval Hindgut		93
Larval Malpighian Tubules		8.1
Larval Fat Body		416
Larval Salivary Gland		40
Larval Trachea		57.275
Larval Carcass		27.025
Adult Head		3050
Adult Eye		1762.375
Adult Brain		120.5
Adult Thoracic-Abdominal Ganglion		111.2
Adult Crop		94.6
Adult Midgut		10.2
Adult Hindgut		368.7
Adult Malpighian Tubules		85.3
Adult Fat Body		5157.8
Adult Salivary Gland		14.3
Adult Heart		4634.45
Adult VirginFemale Spermatheca		4092.6
Adult InseminatedFemale Spermatheca		2997
Adult Ovary		3.2
Adult Testis		4.7
Adult Male Accessory Gland		11.9
Adult Carcass		3608.8
Expression Level Scale		None Low Moderate High Very high

Heatmap
Tissue		Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level	Tissue	Adult Expression Level
NA	Head	3050
NA	Eye	1762.375
NA	Brain	120.5
6.425	Central Nervous System	NA
NA	Thoracic-Abdominal Ganglion	111.2
NA	Crop	94.6
no informative data	Midgut	no informative data
93	Hindgut	368.7
8.1	Malpighian Tubules	no informative data
416	Fat Body	5157.8
40	Salivary Gland	no informative data
NA	Heart	4634.45
57.275	Trachea	NA
NA	VirginFemale Spermatheca	4092.6
NA	InseminatedFemale Spermatheca	2997
NA	Ovary	3.2
NA	Testis	4.7
NA	Male Accessory Gland	no informative data
27.025	Carcass	3608.8

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)

modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		0
central nervous system, pupae P8		2
head, virgin 1-day female		337
head, virgin 4-day female		429
head, virgin 20-day female		789
head, mated 1-day female		316
head, mated 4-day female		432
head, mated 20-day female		626
head, mated 1-day male		268
head, mated 4-day male		483
head, mated 20-day male		853
salivary gland, larvae L3 wandering		2
salivary gland, white prepupae		1
digestive system, larvae L3 wandering		2
digestive system, 1-day adult		46
digestive system, 4-day adult		32
digestive system, 20-day adult		30
fat body, larvae L3 wandering		146
fat body, white prepupae		0
fat body, pupae P8		0
carcass, larvae L3 wandering		5
carcass, 1-day adult		483
carcass, 4-day adult		420
carcass, 20-day adult		784
ovary, virgin 4-day female		2
ovary, mated 4-day female		1
testis, mated 4-day male		13
accessory gland, mated 4-day male		12
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		0
central nervous system, pupae P8		2
head, virgin 1-day female		(337)
head, virgin 4-day female		(429)
head, virgin 20-day female		(789)
head, mated 1-day female		(316)
head, mated 4-day female		(432)
head, mated 20-day female		(626)
head, mated 1-day male		(268)
head, mated 4-day male		(483)
head, mated 20-day male		(853)
salivary gland, larvae L3 wandering		2
salivary gland, white prepupae		1
digestive system, larvae L3 wandering		2
digestive system, 1-day adult		(46)
digestive system, 4-day adult		(32)
digestive system, 20-day adult		(30)
fat body, larvae L3 wandering		(146)
fat body, white prepupae		0
fat body, pupae P8		0
carcass, larvae L3 wandering		5
carcass, 1-day adult		(483)
carcass, 4-day adult		(420)
carcass, 20-day adult		(784)
ovary, virgin 4-day female		2
ovary, mated 4-day female		1
testis, mated 4-day male		13
accessory gland, mated 4-day male		12
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		0
central nervous system, pupae P8		2
head, virgin 1-day female		(337)
head, virgin 4-day female		(429)
head, virgin 20-day female		(789)
head, mated 1-day female		(316)
head, mated 4-day female		(432)
head, mated 20-day female		(626)
head, mated 1-day male		(268)
head, mated 4-day male		(483)
head, mated 20-day male		(853)
salivary gland, larvae L3 wandering		2
salivary gland, white prepupae		1
digestive system, larvae L3 wandering		2
digestive system, 1-day adult		46
digestive system, 4-day adult		32
digestive system, 20-day adult		30
fat body, larvae L3 wandering		(146)
fat body, white prepupae		0
fat body, pupae P8		0
carcass, larvae L3 wandering		5
carcass, 1-day adult		(483)
carcass, 4-day adult		(420)
carcass, 20-day adult		(784)
ovary, virgin 4-day female		2
ovary, mated 4-day female		1
testis, mated 4-day male		13
accessory gland, mated 4-day male		12
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		0
central nervous system, pupae P8		2
head, virgin 1-day female		337
head, virgin 4-day female		429
head, virgin 20-day female		789
head, mated 1-day female		316
head, mated 4-day female		432
head, mated 20-day female		626
head, mated 1-day male		268
head, mated 4-day male		483
head, mated 20-day male		853
salivary gland, larvae L3 wandering		2
salivary gland, white prepupae		1
digestive system, larvae L3 wandering		2
digestive system, 1-day adult		46
digestive system, 4-day adult		32
digestive system, 20-day adult		30
fat body, larvae L3 wandering		146
fat body, white prepupae		0
fat body, pupae P8		0
carcass, larvae L3 wandering		5
carcass, 1-day adult		483
carcass, 4-day adult		420
carcass, 20-day adult		784
ovary, virgin 4-day female		2
ovary, mated 4-day female		1
testis, mated 4-day male		13
accessory gland, mated 4-day male		12
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		0
central nervous system, pupae P8		2
head, virgin 1-day female		337
head, virgin 4-day female		429
head, virgin 20-day female		789
head, mated 1-day female		316
head, mated 4-day female		432
head, mated 20-day female		626
head, mated 1-day male		268
head, mated 4-day male		483
head, mated 20-day male		853
salivary gland, larvae L3 wandering		2
salivary gland, white prepupae		1
digestive system, larvae L3 wandering		2
digestive system, 1-day adult		46
digestive system, 4-day adult		32
digestive system, 20-day adult		30
fat body, larvae L3 wandering		146
fat body, white prepupae		0
fat body, pupae P8		0
carcass, larvae L3 wandering		5
carcass, 1-day adult		483
carcass, 4-day adult		420
carcass, 20-day adult		784
ovary, virgin 4-day female		2
ovary, mated 4-day female		1
testis, mated 4-day male		13
accessory gland, mated 4-day male		12
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

log, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		0
central nervous system, pupae P8		2
head, virgin 1-day female		(337)
head, virgin 4-day female		(429)
head, virgin 20-day female		(789)
head, mated 1-day female		(316)
head, mated 4-day female		(432)
head, mated 20-day female		(626)
head, mated 1-day male		(268)
head, mated 4-day male		(483)
head, mated 20-day male		(853)
salivary gland, larvae L3 wandering		2
salivary gland, white prepupae		1
digestive system, larvae L3 wandering		2
digestive system, 1-day adult		(46)
digestive system, 4-day adult		32
digestive system, 20-day adult		30
fat body, larvae L3 wandering		(146)
fat body, white prepupae		0
fat body, pupae P8		0
carcass, larvae L3 wandering		5
carcass, 1-day adult		(483)
carcass, 4-day adult		(420)
carcass, 20-day adult		(784)
ovary, virgin 4-day female		2
ovary, mated 4-day female		1
testis, mated 4-day male		13
accessory gland, mated 4-day male		12
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		0
central nervous system, pupae P8		2
head, virgin 1-day female		(337)
head, virgin 4-day female		(429)
head, virgin 20-day female		(789)
head, mated 1-day female		(316)
head, mated 4-day female		(432)
head, mated 20-day female		(626)
head, mated 1-day male		(268)
head, mated 4-day male		(483)
head, mated 20-day male		(853)
salivary gland, larvae L3 wandering		2
salivary gland, white prepupae		1
digestive system, larvae L3 wandering		2
digestive system, 1-day adult		46
digestive system, 4-day adult		32
digestive system, 20-day adult		30
fat body, larvae L3 wandering		(146)
fat body, white prepupae		0
fat body, pupae P8		0
carcass, larvae L3 wandering		5
carcass, 1-day adult		(483)
carcass, 4-day adult		(420)
carcass, 20-day adult		(784)
ovary, virgin 4-day female		2
ovary, mated 4-day female		1
testis, mated 4-day male		13
accessory gland, mated 4-day male		12
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		1
central nervous system, larvae L3		0
central nervous system, pupae P8		2
head, virgin 1-day female		337
head, virgin 4-day female		429
head, virgin 20-day female		789
head, mated 1-day female		316
head, mated 4-day female		432
head, mated 20-day female		626
head, mated 1-day male		268
head, mated 4-day male		483
head, mated 20-day male		853
salivary gland, larvae L3 wandering		2
salivary gland, white prepupae		1
digestive system, larvae L3 wandering		2
digestive system, 1-day adult		46
digestive system, 4-day adult		32
digestive system, 20-day adult		30
fat body, larvae L3 wandering		146
fat body, white prepupae		0
fat body, pupae P8		0
carcass, larvae L3 wandering		5
carcass, 1-day adult		483
carcass, 4-day adult		420
carcass, 20-day adult		784
ovary, virgin 4-day female		2
ovary, mated 4-day female		1
testis, mated 4-day male		13
accessory gland, mated 4-day male		12
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Tissue		Expression Level
imaginal disc, larvae L3 wandering
central nervous system, larvae L3
central nervous system, pupae P8
head, virgin 1-day female
head, virgin 4-day female
head, virgin 20-day female
head, mated 1-day female
head, mated 4-day female
head, mated 20-day female
head, mated 1-day male
head, mated 4-day male
head, mated 20-day male
salivary gland, larvae L3 wandering
salivary gland, white prepupae
digestive system, larvae L3 wandering
digestive system, 1-day adult
digestive system, 4-day adult
digestive system, 20-day adult
fat body, larvae L3 wandering
fat body, white prepupae
fat body, pupae P8
carcass, larvae L3 wandering
carcass, 1-day adult
carcass, 4-day adult
carcass, 20-day adult
ovary, virgin 4-day female
ovary, mated 4-day female
testis, mated 4-day male
accessory gland, mated 4-day male

modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of no expression detected. Peak expression observed at stages throughout the larval period, in stages of adults of both sexes.
[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		0
embryo 16-18hr		0
embryo 18-20hr		0
embryo 20-22hr		2
embryo 22-24hr		3
larva L1		3
larva L2		12
larva L3 12hr old		69
larva L3 puffstage 1-2		60
larva L3 puffstage 3-6		14
larva L3 puffstage 7-9		2
white prepupae new		0
white prepupae 12hr		1
white prepupae 24hr		0
pupae 2d postWPP		1
pupae 3d postWPP		32
pupae 4d postWPP		32
adult male 01day		110
adult male 05day		68
adult male 30day		42
adult female 01day		41
adult female 05day		46
adult female 30day		71
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		0
embryo 16-18hr		0
embryo 18-20hr		0
embryo 20-22hr		2
embryo 22-24hr		3
larva L1		3
larva L2		12
larva L3 12hr old		(69)
larva L3 puffstage 1-2		(60)
larva L3 puffstage 3-6		14
larva L3 puffstage 7-9		2
white prepupae new		0
white prepupae 12hr		1
white prepupae 24hr		0
pupae 2d postWPP		1
pupae 3d postWPP		(32)
pupae 4d postWPP		(32)
adult male 01day		(110)
adult male 05day		(68)
adult male 30day		(42)
adult female 01day		(41)
adult female 05day		(46)
adult female 30day		(71)
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		0
embryo 16-18hr		0
embryo 18-20hr		0
embryo 20-22hr		2
embryo 22-24hr		3
larva L1		3
larva L2		12
larva L3 12hr old		69
larva L3 puffstage 1-2		60
larva L3 puffstage 3-6		14
larva L3 puffstage 7-9		2
white prepupae new		0
white prepupae 12hr		1
white prepupae 24hr		0
pupae 2d postWPP		1
pupae 3d postWPP		32
pupae 4d postWPP		32
adult male 01day		(110)
adult male 05day		68
adult male 30day		42
adult female 01day		41
adult female 05day		46
adult female 30day		71
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		0
embryo 16-18hr		0
embryo 18-20hr		0
embryo 20-22hr		2
embryo 22-24hr		3
larva L1		3
larva L2		12
larva L3 12hr old		69
larva L3 puffstage 1-2		60
larva L3 puffstage 3-6		14
larva L3 puffstage 7-9		2
white prepupae new		0
white prepupae 12hr		1
white prepupae 24hr		0
pupae 2d postWPP		1
pupae 3d postWPP		32
pupae 4d postWPP		32
adult male 01day		110
adult male 05day		68
adult male 30day		42
adult female 01day		41
adult female 05day		46
adult female 30day		71
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		0
embryo 16-18hr		0
embryo 18-20hr		0
embryo 20-22hr		2
embryo 22-24hr		3
larva L1		3
larva L2		12
larva L3 12hr old		69
larva L3 puffstage 1-2		60
larva L3 puffstage 3-6		14
larva L3 puffstage 7-9		2
white prepupae new		0
white prepupae 12hr		1
white prepupae 24hr		0
pupae 2d postWPP		1
pupae 3d postWPP		32
pupae 4d postWPP		32
adult male 01day		110
adult male 05day		68
adult male 30day		42
adult female 01day		41
adult female 05day		46
adult female 30day		71
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		0
embryo 16-18hr		0
embryo 18-20hr		0
embryo 20-22hr		2
embryo 22-24hr		3
larva L1		3
larva L2		12
larva L3 12hr old		(69)
larva L3 puffstage 1-2		(60)
larva L3 puffstage 3-6		14
larva L3 puffstage 7-9		2
white prepupae new		0
white prepupae 12hr		1
white prepupae 24hr		0
pupae 2d postWPP		1
pupae 3d postWPP		32
pupae 4d postWPP		32
adult male 01day		(110)
adult male 05day		(68)
adult male 30day		(42)
adult female 01day		(41)
adult female 05day		(46)
adult female 30day		(71)
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		0
embryo 16-18hr		0
embryo 18-20hr		0
embryo 20-22hr		2
embryo 22-24hr		3
larva L1		3
larva L2		12
larva L3 12hr old		69
larva L3 puffstage 1-2		60
larva L3 puffstage 3-6		14
larva L3 puffstage 7-9		2
white prepupae new		0
white prepupae 12hr		1
white prepupae 24hr		0
pupae 2d postWPP		1
pupae 3d postWPP		32
pupae 4d postWPP		32
adult male 01day		110
adult male 05day		68
adult male 30day		42
adult female 01day		41
adult female 05day		46
adult female 30day		71
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		0
embryo 02-04hr		0
embryo 04-06hr		0
embryo 06-08hr		0
embryo 08-10hr		0
embryo 10-12hr		0
embryo 12-14hr		0
embryo 14-16hr		0
embryo 16-18hr		0
embryo 18-20hr		0
embryo 20-22hr		2
embryo 22-24hr		3
larva L1		3
larva L2		12
larva L3 12hr old		69
larva L3 puffstage 1-2		60
larva L3 puffstage 3-6		14
larva L3 puffstage 7-9		2
white prepupae new		0
white prepupae 12hr		1
white prepupae 24hr		0
pupae 2d postWPP		1
pupae 3d postWPP		32
pupae 4d postWPP		32
adult male 01day		110
adult male 05day		68
adult male 30day		42
adult female 01day		41
adult female 05day		46
adult female 30day		71
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Developmental Stage		Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day

modENCODE Temporal Expression Data (Graveley et al., 2011)

modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		0
embryonic Kc167		0
embryonic S1		0
embryonic S3		0
leg disc CME L1		0
wing disc CME-W2		3
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		0
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		2
tumorous blood cells mbn2		0
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate

Linear, scaled to Moderate expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		0
embryonic Kc167		0
embryonic S1		0
embryonic S3		0
leg disc CME L1		0
wing disc CME-W2		3
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		0
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		2
tumorous blood cells mbn2		0
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		0
embryonic Kc167		0
embryonic S1		0
embryonic S3		0
leg disc CME L1		0
wing disc CME-W2		3
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		0
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		2
tumorous blood cells mbn2		0
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		0
embryonic Kc167		0
embryonic S1		0
embryonic S3		0
leg disc CME L1		0
wing disc CME-W2		3
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		0
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		2
tumorous blood cells mbn2		0
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		0
embryonic Kc167		0
embryonic S1		0
embryonic S3		0
leg disc CME L1		0
wing disc CME-W2		3
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		0
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		2
tumorous blood cells mbn2		0
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate

log, scaled to Moderate expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		0
embryonic Kc167		0
embryonic S1		0
embryonic S3		0
leg disc CME L1		0
wing disc CME-W2		3
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		0
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		2
tumorous blood cells mbn2		0
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		0
embryonic Kc167		0
embryonic S1		0
embryonic S3		0
leg disc CME L1		0
wing disc CME-W2		3
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		0
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		2
tumorous blood cells mbn2		0
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Cell Line		Expression Level
Schneider line 2 S2R+		0
Schneider line 2 Sg4		0
embryonic 1182-4H		0
embryonic GM2		0
embryonic Kc167		0
embryonic S1		0
embryonic S3		0
leg disc CME L1		0
wing disc CME-W2		3
wing disc ML-DmD8		0
wing disc ML-DmD9		0
wing disc ML-DmD16-c3		0
wing disc ML-DmD21		0
wing disc ML-DmD32		0
haltere disc ML-DmD17-c3		0
eye-antennal disc ML-DmD11		0
antennal disc ML-DmD20-c5		0
mixed discs ML-DmD4-c1		0
CNS ML-DmBG1-c1		0
CNS ML-DmBG2-c2		2
tumorous blood cells mbn2		0
ovary fGS/OSS		0
ovary OSC		0
ovary OSS		0
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Cell Line		Expression Level
Schneider line 2 S2R+
Schneider line 2 Sg4
embryonic 1182-4H
embryonic GM2
embryonic Kc167
embryonic S1
embryonic S3
leg disc CME L1
wing disc CME-W2
wing disc ML-DmD8
wing disc ML-DmD9
wing disc ML-DmD16-c3
wing disc ML-DmD21
wing disc ML-DmD32
haltere disc ML-DmD17-c3
eye-antennal disc ML-DmD11
antennal disc ML-DmD20-c5
mixed discs ML-DmD4-c1
CNS ML-DmBG1-c1
CNS ML-DmBG2-c2
tumorous blood cells mbn2
ovary fGS/OSS
ovary OSC
ovary OSS

modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		24
cold shock, 4-day adult		18
heat shock, 4-day adult		80
Cadmium 50 mM 6 hrs, larvae L3		57
Cadmium 50 mM 12 hrs, larvae L3		29
Cadmium 50 mM 48 hrs, 4-day adult		62
Cadmium 100 mM 48 hrs, 4-day adult		71
Copper 0.5 mM 12 hrs, larvae L3		3
Copper 15 mM 48 hrs, 4-day adult		164
Zinc 5 mM 12 hrs, larvae L3		16
Zinc 4.5 mM 48 hrs, 4-day adult		315
Ethanol 2.5% 3 hrs, larvae L3		58
Ethanol 5% 3 hrs, larvae L3		113
Ethanol 10% 3 hrs, larvae L3		56
Caffeine 1.5 mg/ml 4 hrs, larvae L3		99
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		174
Caffeine 25 mg/ml 48 hrs, 4-day adult		73
Paraquat 5 mM 48 hrs, 4-day adult		120
Paraquat 10 mM 48 hrs, 4-day adult		102
Rotenone 2 μg 12 hrs, larvae L3		74
Rotenone 8 μg 12 hrs, larvae L3		22
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		24
cold shock, 4-day adult		18
heat shock, 4-day adult		(80)
Cadmium 50 mM 6 hrs, larvae L3		(57)
Cadmium 50 mM 12 hrs, larvae L3		(29)
Cadmium 50 mM 48 hrs, 4-day adult		(62)
Cadmium 100 mM 48 hrs, 4-day adult		(71)
Copper 0.5 mM 12 hrs, larvae L3		3
Copper 15 mM 48 hrs, 4-day adult		(164)
Zinc 5 mM 12 hrs, larvae L3		16
Zinc 4.5 mM 48 hrs, 4-day adult		(315)
Ethanol 2.5% 3 hrs, larvae L3		(58)
Ethanol 5% 3 hrs, larvae L3		(113)
Ethanol 10% 3 hrs, larvae L3		(56)
Caffeine 1.5 mg/ml 4 hrs, larvae L3		(99)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		(174)
Caffeine 25 mg/ml 48 hrs, 4-day adult		(73)
Paraquat 5 mM 48 hrs, 4-day adult		(120)
Paraquat 10 mM 48 hrs, 4-day adult		(102)
Rotenone 2 μg 12 hrs, larvae L3		(74)
Rotenone 8 μg 12 hrs, larvae L3		22
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		24
cold shock, 4-day adult		18
heat shock, 4-day adult		80
Cadmium 50 mM 6 hrs, larvae L3		57
Cadmium 50 mM 12 hrs, larvae L3		29
Cadmium 50 mM 48 hrs, 4-day adult		62
Cadmium 100 mM 48 hrs, 4-day adult		71
Copper 0.5 mM 12 hrs, larvae L3		3
Copper 15 mM 48 hrs, 4-day adult		(164)
Zinc 5 mM 12 hrs, larvae L3		16
Zinc 4.5 mM 48 hrs, 4-day adult		(315)
Ethanol 2.5% 3 hrs, larvae L3		58
Ethanol 5% 3 hrs, larvae L3		(113)
Ethanol 10% 3 hrs, larvae L3		56
Caffeine 1.5 mg/ml 4 hrs, larvae L3		99
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		(174)
Caffeine 25 mg/ml 48 hrs, 4-day adult		73
Paraquat 5 mM 48 hrs, 4-day adult		(120)
Paraquat 10 mM 48 hrs, 4-day adult		102
Rotenone 2 μg 12 hrs, larvae L3		74
Rotenone 8 μg 12 hrs, larvae L3		22
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		24
cold shock, 4-day adult		18
heat shock, 4-day adult		80
Cadmium 50 mM 6 hrs, larvae L3		57
Cadmium 50 mM 12 hrs, larvae L3		29
Cadmium 50 mM 48 hrs, 4-day adult		62
Cadmium 100 mM 48 hrs, 4-day adult		71
Copper 0.5 mM 12 hrs, larvae L3		3
Copper 15 mM 48 hrs, 4-day adult		164
Zinc 5 mM 12 hrs, larvae L3		16
Zinc 4.5 mM 48 hrs, 4-day adult		315
Ethanol 2.5% 3 hrs, larvae L3		58
Ethanol 5% 3 hrs, larvae L3		113
Ethanol 10% 3 hrs, larvae L3		56
Caffeine 1.5 mg/ml 4 hrs, larvae L3		99
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		174
Caffeine 25 mg/ml 48 hrs, 4-day adult		73
Paraquat 5 mM 48 hrs, 4-day adult		120
Paraquat 10 mM 48 hrs, 4-day adult		102
Rotenone 2 μg 12 hrs, larvae L3		74
Rotenone 8 μg 12 hrs, larvae L3		22
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		24
cold shock, 4-day adult		18
heat shock, 4-day adult		80
Cadmium 50 mM 6 hrs, larvae L3		57
Cadmium 50 mM 12 hrs, larvae L3		29
Cadmium 50 mM 48 hrs, 4-day adult		62
Cadmium 100 mM 48 hrs, 4-day adult		71
Copper 0.5 mM 12 hrs, larvae L3		3
Copper 15 mM 48 hrs, 4-day adult		164
Zinc 5 mM 12 hrs, larvae L3		16
Zinc 4.5 mM 48 hrs, 4-day adult		315
Ethanol 2.5% 3 hrs, larvae L3		58
Ethanol 5% 3 hrs, larvae L3		113
Ethanol 10% 3 hrs, larvae L3		56
Caffeine 1.5 mg/ml 4 hrs, larvae L3		99
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		174
Caffeine 25 mg/ml 48 hrs, 4-day adult		73
Paraquat 5 mM 48 hrs, 4-day adult		120
Paraquat 10 mM 48 hrs, 4-day adult		102
Rotenone 2 μg 12 hrs, larvae L3		74
Rotenone 8 μg 12 hrs, larvae L3		22
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		24
cold shock, 4-day adult		18
heat shock, 4-day adult		(80)
Cadmium 50 mM 6 hrs, larvae L3		(57)
Cadmium 50 mM 12 hrs, larvae L3		29
Cadmium 50 mM 48 hrs, 4-day adult		(62)
Cadmium 100 mM 48 hrs, 4-day adult		(71)
Copper 0.5 mM 12 hrs, larvae L3		3
Copper 15 mM 48 hrs, 4-day adult		(164)
Zinc 5 mM 12 hrs, larvae L3		16
Zinc 4.5 mM 48 hrs, 4-day adult		(315)
Ethanol 2.5% 3 hrs, larvae L3		(58)
Ethanol 5% 3 hrs, larvae L3		(113)
Ethanol 10% 3 hrs, larvae L3		(56)
Caffeine 1.5 mg/ml 4 hrs, larvae L3		(99)
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		(174)
Caffeine 25 mg/ml 48 hrs, 4-day adult		(73)
Paraquat 5 mM 48 hrs, 4-day adult		(120)
Paraquat 10 mM 48 hrs, 4-day adult		(102)
Rotenone 2 μg 12 hrs, larvae L3		(74)
Rotenone 8 μg 12 hrs, larvae L3		22
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		24
cold shock, 4-day adult		18
heat shock, 4-day adult		80
Cadmium 50 mM 6 hrs, larvae L3		57
Cadmium 50 mM 12 hrs, larvae L3		29
Cadmium 50 mM 48 hrs, 4-day adult		62
Cadmium 100 mM 48 hrs, 4-day adult		71
Copper 0.5 mM 12 hrs, larvae L3		3
Copper 15 mM 48 hrs, 4-day adult		(164)
Zinc 5 mM 12 hrs, larvae L3		16
Zinc 4.5 mM 48 hrs, 4-day adult		(315)
Ethanol 2.5% 3 hrs, larvae L3		58
Ethanol 5% 3 hrs, larvae L3		113
Ethanol 10% 3 hrs, larvae L3		56
Caffeine 1.5 mg/ml 4 hrs, larvae L3		99
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		(174)
Caffeine 25 mg/ml 48 hrs, 4-day adult		73
Paraquat 5 mM 48 hrs, 4-day adult		120
Paraquat 10 mM 48 hrs, 4-day adult		102
Rotenone 2 μg 12 hrs, larvae L3		74
Rotenone 8 μg 12 hrs, larvae L3		22
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		24
cold shock, 4-day adult		18
heat shock, 4-day adult		80
Cadmium 50 mM 6 hrs, larvae L3		57
Cadmium 50 mM 12 hrs, larvae L3		29
Cadmium 50 mM 48 hrs, 4-day adult		62
Cadmium 100 mM 48 hrs, 4-day adult		71
Copper 0.5 mM 12 hrs, larvae L3		3
Copper 15 mM 48 hrs, 4-day adult		164
Zinc 5 mM 12 hrs, larvae L3		16
Zinc 4.5 mM 48 hrs, 4-day adult		315
Ethanol 2.5% 3 hrs, larvae L3		58
Ethanol 5% 3 hrs, larvae L3		113
Ethanol 10% 3 hrs, larvae L3		56
Caffeine 1.5 mg/ml 4 hrs, larvae L3		99
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		174
Caffeine 25 mg/ml 48 hrs, 4-day adult		73
Paraquat 5 mM 48 hrs, 4-day adult		120
Paraquat 10 mM 48 hrs, 4-day adult		102
Rotenone 2 μg 12 hrs, larvae L3		74
Rotenone 8 μg 12 hrs, larvae L3		22
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Treatment		Expression Level
extended cold, 4-day adult
cold shock, 4-day adult
heat shock, 4-day adult
Cadmium 50 mM 6 hrs, larvae L3
Cadmium 50 mM 12 hrs, larvae L3
Cadmium 50 mM 48 hrs, 4-day adult
Cadmium 100 mM 48 hrs, 4-day adult
Copper 0.5 mM 12 hrs, larvae L3
Copper 15 mM 48 hrs, 4-day adult
Zinc 5 mM 12 hrs, larvae L3
Zinc 4.5 mM 48 hrs, 4-day adult
Ethanol 2.5% 3 hrs, larvae L3
Ethanol 5% 3 hrs, larvae L3
Ethanol 10% 3 hrs, larvae L3
Caffeine 1.5 mg/ml 4 hrs, larvae L3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
Caffeine 25 mg/ml 48 hrs, 4-day adult
Paraquat 5 mM 48 hrs, 4-day adult
Paraquat 10 mM 48 hrs, 4-day adult
Rotenone 2 μg 12 hrs, larvae L3
Rotenone 8 μg 12 hrs, larvae L3

Expression Clusters

A cluster of genes with similar mRNA expression dynamics across development.

(The modENCODE Consortium, 2010)

mE2_34_mRNA_expression_cluster_04

External Data & Images

Linkouts

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0028526

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

•

CG15293-RA

Alleles & Phenotypes

Summary of Allele Phenotypes

Lethality

Allele

viable, with Scer\GAL4^pnr-MD237

CG15293^GD13383

Phenotype manifest in

Allele

Classical Alleles ( 1 )

For All Classical Alleles Show

Allele of CG15293	Class	Mutagen	Stocks	Known lesion
CG15293^MI06486			1	--

Alleles Carried on Transgenic Constructs ( 3 )

For All Alleles Carried on Transgenic Constructs Show

Allele of CG15293	Mutagen	Stocks	Known lesion
CG15293^GD13383	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
CG15293^KK105595	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
CG15293^NIG.15293R	in vitro construct - RNAi in vitro construct - regulatory fusion	0	Yes

Aneuploid Aberrations

Disrupted in

Df(2L)Exel8032

(Ryder, 2004.4.26)

Transgenic Constructs & Insertions

Transgenic Constructs

Type of construct

Name

Expression data

UAS construct

P{GD13383}

P{KK105595}

P{NIG.15293R}

Insertions

Type of insertions

Name

Expression data

miscellaneous insertions

Mi{MIC}CG15293^MI06486

Gene Ontology: Function, Process & Cellular Component ( 1 unique term )

Terms Based on Experimental Evidence ( 1 term )

Molecular Function ( 0 terms)

Biological Process ( 0 terms)

Cellular Component

CV term

Evidence

References

extracellular region

inferred from direct assay

(Karlsson et al., 2004)

Terms Based on Predictions or Assertions ( 0 terms )

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Interactions & Pathways

Summary of Physical Interactions

Summary of Genetic Interactions

Interacts with

Please look at the allele data for full details of the genetic interactions

CG15293 allele

Gene

References

External Data

Linkouts

BioGRID - A database of protein and genetic interactions

•

60854

DroID - A comprehensive database of gene and protein interactions.

•

FBgn0028526

InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.

•

34828

Orthologs

OrthoDB Orthologs (16) - based on analysis using Dmel annotation version 5.41

OrthoDB Ortholog Groups

OrthoDB orthology group searches

(Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288)

Drosophila inclusive ortholog search

EOG6K9BZ8

Dipteran inclusive ortholog search

No orthologs identified

Insect inclusive ortholog search

No orthologs identified

Arthropod inclusive ortholog search

No orthologs identified

Metazoa inclusive ortholog search

No orthologs identified

Orthologs in Drosophila Species (EOG6K9BZ8)

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila melanogaster

fruit fly

Dmel\CG15293

Drosophila melanogaster

fruit fly

Drosophila simulans

Drosophila simulans

Drosophila sechellia

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA13631

Drosophila persimilis

Dper\GL21057

Drosophila willistoni

Dwil\GK15103

Drosophila virilis

Dvir\GJ18065

Drosophila mojavensis

Dmoj\GI17387

Drosophila grimshawi

Dgri\GH10599

Orthologs in non-Drosophila Dipterans (None identified)

No non-Drosophilid orthologies identified

Orthologs in non-Dipteran Insects (None identified)

No non-Dipteran orthologies identified

Orthologs in non-Insect Arthropods (None identified)

No non-Insect Arthropod orthologies identified

Orthologs in non-Arthropod Metazoa (None identified)

No non-Arthropod Metazoa orthologies identified

Human Orthologs (0)

Gene

OMIM

HGNC

AAA Orthologs (4) based on analysis using Dmel annotation version 4.3

Organism

Gene

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Stocks & Reagents

Stocks Listed in FlyBase ( 3 )

Bloomington

43070

y¹ w^*; Mi{MIC}CG15293^MI06486

VDRC

v102861

P{KK105595}VIE-260B

v44627

w¹¹¹⁸; P{GD13383}v44627/TM3

Genomic Clones ( 1 )

BACR18J08

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones ( 25 )

Please Note

This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA Clones, Fully Sequenced

BDGP DGC clones