A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\CHOp24

General Information
SymbolDmel\CHOp24SpeciesD. melanogaster
NameCHOp24Annotation symbolCG3564
Feature typeprotein_coding_geneFlyBase IDFBgn0029709
Gene Model StatusCurrent Stock availability 7 publicly available
Genomic Location
Chromosome (arm)XRecombination map
Cytogenetic map4C7-4C7Sequence locationX:4,434,943..4,436,471 [+]

Genomic Maps

GBrowse View Help
modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
The gene CHOp24 is referred to in FlyBase by the symbol Dmel\CHOp24 (CG3564, FBgn0029709). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: transport. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: GOLD; Immunoglobulin-like fold. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed within 06-18 hour embryonic stages, during early larval stages, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult eye, larval/adult midgut, larval hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, adult hindgut, adult Malpighian tubules, adult ovary, adult testis, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1623771_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CHOp24. Gene sequence location is X:4434943..4436471.

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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
Controlled Vocabulary Terms
FB2012_01
References
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
4C7-4C7  
Limits computationally determined from genome sequence between P{EP}CG2930EP1352 and P{EP}EP425  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\CHOp24 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0070702 FBtr0301530 FBtr0070675 FBtr0070676 FBtr0070703 FBpp0070670 FBpp0290745 FBpp0070643 FBpp0070644 FBti0053493 FBti0035232 FBti0048922 FBti0041829 FBti0067185
Comments on Gene Model
Gene model reviewed during 5.40
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0070675
  1102
  208
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0070643  
23.3  
208  
5.57  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
GOLD (IPR009038)
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view rb-RA rb-RB CHOp24-RA CG3568-RA CG32773-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0029709


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0029709
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderately high expression. Peak expression observed within 06-18 hour embryonic stages, during early larval stages, in adult male stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0029709 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 7579
embryo 02-04hr
 
 8279
embryo 04-06hr
 
 8987
embryo 06-08hr
 
 13464
embryo 08-10hr
 
 16766
embryo 10-12hr
 
 27777
embryo 12-14hr
 
 12718
embryo 14-16hr
 
 18212
embryo 16-18hr
 
 10129
embryo 18-20hr
 
 6310
embryo 20-22hr
 
 4352
embryo 22-24hr
 
 3969
larva L1
 
 8778
larva L2
 
 13026
larva L3 12hr old
 
 9659
larva L3 puffstage 1-2
 
 9911
larva L3 puffstage 3-6
 
 8572
larva L3 puffstage 7-9
 
 7716
white prepupae new
 
 7456
white prepupae 12hr
 
 4760
white prepupae 24hr
 
 6412
pupae 2d postWPP
 
 6218
pupae 3d postWPP
 
 4560
pupae 4d postWPP
 
 5025
adult male 01day
 
 7351
adult male 05day
 
 7851
adult male 30day
 
 10255
adult female 01day
 
 8377
adult female 05day
 
 7196
adult female 30day
 
 7730
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (7579)
embryo 02-04hr
 (8279)
embryo 04-06hr
 (8987)
embryo 06-08hr
 (13464)
embryo 08-10hr
 (16766)
embryo 10-12hr
 (27777)
embryo 12-14hr
 (12718)
embryo 14-16hr
 (18212)
embryo 16-18hr
 (10129)
embryo 18-20hr
 (6310)
embryo 20-22hr
 (4352)
embryo 22-24hr
 (3969)
larva L1
 (8778)
larva L2
 (13026)
larva L3 12hr old
 (9659)
larva L3 puffstage 1-2
 (9911)
larva L3 puffstage 3-6
 (8572)
larva L3 puffstage 7-9
 (7716)
white prepupae new
 (7456)
white prepupae 12hr
 (4760)
white prepupae 24hr
 (6412)
pupae 2d postWPP
 (6218)
pupae 3d postWPP
 (4560)
pupae 4d postWPP
 (5025)
adult male 01day
 (7351)
adult male 05day
 (7851)
adult male 30day
 (10255)
adult female 01day
 (8377)
adult female 05day
 (7196)
adult female 30day
 (7730)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (7579)
embryo 02-04hr
 (8279)
embryo 04-06hr
 (8987)
embryo 06-08hr
 (13464)
embryo 08-10hr
 (16766)
embryo 10-12hr
 (27777)
embryo 12-14hr
 (12718)
embryo 14-16hr
 (18212)
embryo 16-18hr
 (10129)
embryo 18-20hr
 (6310)
embryo 20-22hr
 (4352)
embryo 22-24hr
 (3969)
larva L1
 (8778)
larva L2
 (13026)
larva L3 12hr old
 (9659)
larva L3 puffstage 1-2
 (9911)
larva L3 puffstage 3-6
 (8572)
larva L3 puffstage 7-9
 (7716)
white prepupae new
 (7456)
white prepupae 12hr
 (4760)
white prepupae 24hr
 (6412)
pupae 2d postWPP
 (6218)
pupae 3d postWPP
 (4560)
pupae 4d postWPP
 (5025)
adult male 01day
 (7351)
adult male 05day
 (7851)
adult male 30day
 (10255)
adult female 01day
 (8377)
adult female 05day
 (7196)
adult female 30day
 (7730)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7579
embryo 02-04hr
 
 8279
embryo 04-06hr
 
 8987
embryo 06-08hr
 (13464)
embryo 08-10hr
 (16766)
embryo 10-12hr
 (27777)
embryo 12-14hr
 (12718)
embryo 14-16hr
 (18212)
embryo 16-18hr
 10129
embryo 18-20hr
 
 6310
embryo 20-22hr
 
 4352
embryo 22-24hr
 
 3969
larva L1
 
 8778
larva L2
 (13026)
larva L3 12hr old
 
 9659
larva L3 puffstage 1-2
 
 9911
larva L3 puffstage 3-6
 
 8572
larva L3 puffstage 7-9
 
 7716
white prepupae new
 
 7456
white prepupae 12hr
 
 4760
white prepupae 24hr
 
 6412
pupae 2d postWPP
 
 6218
pupae 3d postWPP
 
 4560
pupae 4d postWPP
 
 5025
adult male 01day
 
 7351
adult male 05day
 
 7851
adult male 30day
 10255
adult female 01day
 
 8377
adult female 05day
 
 7196
adult female 30day
 
 7730
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7579
embryo 02-04hr
 
 8279
embryo 04-06hr
 
 8987
embryo 06-08hr
 
 13464
embryo 08-10hr
 
 16766
embryo 10-12hr
 
 27777
embryo 12-14hr
 
 12718
embryo 14-16hr
 
 18212
embryo 16-18hr
 
 10129
embryo 18-20hr
 
 6310
embryo 20-22hr
 
 4352
embryo 22-24hr
 
 3969
larva L1
 
 8778
larva L2
 
 13026
larva L3 12hr old
 
 9659
larva L3 puffstage 1-2
 
 9911
larva L3 puffstage 3-6
 
 8572
larva L3 puffstage 7-9
 
 7716
white prepupae new
 
 7456
white prepupae 12hr
 
 4760
white prepupae 24hr
 
 6412
pupae 2d postWPP
 
 6218
pupae 3d postWPP
 
 4560
pupae 4d postWPP
 
 5025
adult male 01day
 
 7351
adult male 05day
 
 7851
adult male 30day
 
 10255
adult female 01day
 
 8377
adult female 05day
 
 7196
adult female 30day
 
 7730
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0029709 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 7579
embryo 02-04hr
 
 8279
embryo 04-06hr
 
 8987
embryo 06-08hr
 
 13464
embryo 08-10hr
 
 16766
embryo 10-12hr
 
 27777
embryo 12-14hr
 
 12718
embryo 14-16hr
 
 18212
embryo 16-18hr
 
 10129
embryo 18-20hr
 
 6310
embryo 20-22hr
 
 4352
embryo 22-24hr
 
 3969
larva L1
 
 8778
larva L2
 
 13026
larva L3 12hr old
 
 9659
larva L3 puffstage 1-2
 
 9911
larva L3 puffstage 3-6
 
 8572
larva L3 puffstage 7-9
 
 7716
white prepupae new
 
 7456
white prepupae 12hr
 
 4760
white prepupae 24hr
 
 6412
pupae 2d postWPP
 
 6218
pupae 3d postWPP
 
 4560
pupae 4d postWPP
 
 5025
adult male 01day
 
 7351
adult male 05day
 
 7851
adult male 30day
 
 10255
adult female 01day
 
 8377
adult female 05day
 
 7196
adult female 30day
 
 7730
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (7579)
embryo 02-04hr
 (8279)
embryo 04-06hr
 (8987)
embryo 06-08hr
 (13464)
embryo 08-10hr
 (16766)
embryo 10-12hr
 (27777)
embryo 12-14hr
 (12718)
embryo 14-16hr
 (18212)
embryo 16-18hr
 (10129)
embryo 18-20hr
 (6310)
embryo 20-22hr
 (4352)
embryo 22-24hr
 (3969)
larva L1
 (8778)
larva L2
 (13026)
larva L3 12hr old
 (9659)
larva L3 puffstage 1-2
 (9911)
larva L3 puffstage 3-6
 (8572)
larva L3 puffstage 7-9
 (7716)
white prepupae new
 (7456)
white prepupae 12hr
 (4760)
white prepupae 24hr
 (6412)
pupae 2d postWPP
 (6218)
pupae 3d postWPP
 (4560)
pupae 4d postWPP
 (5025)
adult male 01day
 (7351)
adult male 05day
 (7851)
adult male 30day
 (10255)
adult female 01day
 (8377)
adult female 05day
 (7196)
adult female 30day
 (7730)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (7579)
embryo 02-04hr
 (8279)
embryo 04-06hr
 (8987)
embryo 06-08hr
 (13464)
embryo 08-10hr
 (16766)
embryo 10-12hr
 (27777)
embryo 12-14hr
 (12718)
embryo 14-16hr
 (18212)
embryo 16-18hr
 (10129)
embryo 18-20hr
 (6310)
embryo 20-22hr
 (4352)
embryo 22-24hr
 (3969)
larva L1
 (8778)
larva L2
 (13026)
larva L3 12hr old
 (9659)
larva L3 puffstage 1-2
 (9911)
larva L3 puffstage 3-6
 (8572)
larva L3 puffstage 7-9
 (7716)
white prepupae new
 (7456)
white prepupae 12hr
 (4760)
white prepupae 24hr
 (6412)
pupae 2d postWPP
 (6218)
pupae 3d postWPP
 (4560)
pupae 4d postWPP
 (5025)
adult male 01day
 (7351)
adult male 05day
 (7851)
adult male 30day
 (10255)
adult female 01day
 (8377)
adult female 05day
 (7196)
adult female 30day
 (7730)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7579
embryo 02-04hr
 
 8279
embryo 04-06hr
 
 8987
embryo 06-08hr
 13464
embryo 08-10hr
 16766
embryo 10-12hr
 (27777)
embryo 12-14hr
 12718
embryo 14-16hr
 18212
embryo 16-18hr
 10129
embryo 18-20hr
 
 6310
embryo 20-22hr
 
 4352
embryo 22-24hr
 
 3969
larva L1
 
 8778
larva L2
 13026
larva L3 12hr old
 
 9659
larva L3 puffstage 1-2
 
 9911
larva L3 puffstage 3-6
 
 8572
larva L3 puffstage 7-9
 
 7716
white prepupae new
 
 7456
white prepupae 12hr
 
 4760
white prepupae 24hr
 
 6412
pupae 2d postWPP
 
 6218
pupae 3d postWPP
 
 4560
pupae 4d postWPP
 
 5025
adult male 01day
 
 7351
adult male 05day
 
 7851
adult male 30day
 10255
adult female 01day
 
 8377
adult female 05day
 
 7196
adult female 30day
 
 7730
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 7579
embryo 02-04hr
 
 8279
embryo 04-06hr
 
 8987
embryo 06-08hr
 
 13464
embryo 08-10hr
 
 16766
embryo 10-12hr
 
 27777
embryo 12-14hr
 
 12718
embryo 14-16hr
 
 18212
embryo 16-18hr
 
 10129
embryo 18-20hr
 
 6310
embryo 20-22hr
 
 4352
embryo 22-24hr
 
 3969
larva L1
 
 8778
larva L2
 
 13026
larva L3 12hr old
 
 9659
larva L3 puffstage 1-2
 
 9911
larva L3 puffstage 3-6
 
 8572
larva L3 puffstage 7-9
 
 7716
white prepupae new
 
 7456
white prepupae 12hr
 
 4760
white prepupae 24hr
 
 6412
pupae 2d postWPP
 
 6218
pupae 3d postWPP
 
 4560
pupae 4d postWPP
 
 5025
adult male 01day
 
 7351
adult male 05day
 
 7851
adult male 30day
 
 10255
adult female 01day
 
 8377
adult female 05day
 
 7196
adult female 30day
 
 7730
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0029709


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0029709
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult eye, larval/adult midgut, larval hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, adult hindgut, adult Malpighian tubules, adult ovary, adult testis, adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0029709 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 393.7
Larval Midgut
 
 618.9
Larval Hindgut
 
 579.1
Larval Malpighian Tubules
 
 535.4
Larval Fat Body
 
 760.5
Larval Salivary Gland
 
 3628.3
Larval Trachea
 
 936.875
Larval Carcass
 
 699.7
Adult Head
 
 437.7
Adult Eye
 
 836.025
Adult Brain
 
 331.1
Adult Thoracic-Abdominal Ganglion
 
 342.9
Adult Crop
 
 441.9
Adult Midgut
 
 610.6
Adult Hindgut
 
 410.8
Adult Malpighian Tubules
 
 346.9
Adult Fat Body
 
 606.4
Adult Salivary Gland
 
 2124.4
Adult Heart
 
 737.675
Adult VirginFemale Spermatheca
 
 915
Adult InseminatedFemale Spermatheca
 
 1007.3
Adult Ovary
 
 305.3
Adult Testis
 
 114.2
Adult Male Accessory Gland
 
 2034.2
Adult Carcass
 
 449.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 393.7
Larval Midgut
 (618.9)
Larval Hindgut
 (579.1)
Larval Malpighian Tubules
 535.4
Larval Fat Body
 (760.5)
Larval Salivary Gland
 (3628.3)
Larval Trachea
 (936.875)
Larval Carcass
 (699.7)
Adult Head
 
 437.7
Adult Eye
 (836.025)
Adult Brain
 
 331.1
Adult Thoracic-Abdominal Ganglion
 
 342.9
Adult Crop
 
 441.9
Adult Midgut
 (610.6)
Adult Hindgut
 
 410.8
Adult Malpighian Tubules
 
 346.9
Adult Fat Body
 (606.4)
Adult Salivary Gland
 (2124.4)
Adult Heart
 (737.675)
Adult VirginFemale Spermatheca
 (915)
Adult InseminatedFemale Spermatheca
 (1007.3)
Adult Ovary
 
 305.3
Adult Testis
 
 114.2
Adult Male Accessory Gland
 (2034.2)
Adult Carcass
 
 449.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 393.7
Larval Midgut
 
 618.9
Larval Hindgut
 
 579.1
Larval Malpighian Tubules
 
 535.4
Larval Fat Body
 
 760.5
Larval Salivary Gland
 (3628.3)
Larval Trachea
 
 936.875
Larval Carcass
 
 699.7
Adult Head
 
 437.7
Adult Eye
 
 836.025
Adult Brain
 
 331.1
Adult Thoracic-Abdominal Ganglion
 
 342.9
Adult Crop
 
 441.9
Adult Midgut
 
 610.6
Adult Hindgut
 
 410.8
Adult Malpighian Tubules
 
 346.9
Adult Fat Body
 
 606.4
Adult Salivary Gland
 (2124.4)
Adult Heart
 
 737.675
Adult VirginFemale Spermatheca
 
 915
Adult InseminatedFemale Spermatheca
 1007.3
Adult Ovary
 
 305.3
Adult Testis
 
 114.2
Adult Male Accessory Gland
 (2034.2)
Adult Carcass
 
 449.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 393.7
Larval Midgut
 
 618.9
Larval Hindgut
 
 579.1
Larval Malpighian Tubules
 
 535.4
Larval Fat Body
 
 760.5
Larval Salivary Gland
 
 3628.3
Larval Trachea
 
 936.875
Larval Carcass
 
 699.7
Adult Head
 
 437.7
Adult Eye
 
 836.025
Adult Brain
 
 331.1
Adult Thoracic-Abdominal Ganglion
 
 342.9
Adult Crop
 
 441.9
Adult Midgut
 
 610.6
Adult Hindgut
 
 410.8
Adult Malpighian Tubules
 
 346.9
Adult Fat Body
 
 606.4
Adult Salivary Gland
 
 2124.4
Adult Heart
 
 737.675
Adult VirginFemale Spermatheca
 
 915
Adult InseminatedFemale Spermatheca
 
 1007.3
Adult Ovary
 
 305.3
Adult Testis
 
 114.2
Adult Male Accessory Gland
 
 2034.2
Adult Carcass
 
 449.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0029709 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 393.7
Larval Midgut
 
 618.9
Larval Hindgut
 
 579.1
Larval Malpighian Tubules
 
 535.4
Larval Fat Body
 
 760.5
Larval Salivary Gland
 
 3628.3
Larval Trachea
 
 936.875
Larval Carcass
 
 699.7
Adult Head
 
 437.7
Adult Eye
 
 836.025
Adult Brain
 
 331.1
Adult Thoracic-Abdominal Ganglion
 
 342.9
Adult Crop
 
 441.9
Adult Midgut
 
 610.6
Adult Hindgut
 
 410.8
Adult Malpighian Tubules
 
 346.9
Adult Fat Body
 
 606.4
Adult Salivary Gland
 
 2124.4
Adult Heart
 
 737.675
Adult VirginFemale Spermatheca
 
 915
Adult InseminatedFemale Spermatheca
 
 1007.3
Adult Ovary
 
 305.3
Adult Testis
 
 114.2
Adult Male Accessory Gland
 
 2034.2
Adult Carcass
 
 449.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 393.7
Larval Midgut
 618.9
Larval Hindgut
 579.1
Larval Malpighian Tubules
 535.4
Larval Fat Body
 760.5
Larval Salivary Gland
 (3628.3)
Larval Trachea
 (936.875)
Larval Carcass
 699.7
Adult Head
 
 437.7
Adult Eye
 (836.025)
Adult Brain
 
 331.1
Adult Thoracic-Abdominal Ganglion
 
 342.9
Adult Crop
 
 441.9
Adult Midgut
 610.6
Adult Hindgut
 
 410.8
Adult Malpighian Tubules
 
 346.9
Adult Fat Body
 606.4
Adult Salivary Gland
 (2124.4)
Adult Heart
 737.675
Adult VirginFemale Spermatheca
 (915)
Adult InseminatedFemale Spermatheca
 (1007.3)
Adult Ovary
 
 305.3
Adult Testis
 
 114.2
Adult Male Accessory Gland
 (2034.2)
Adult Carcass
 
 449.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 393.7
Larval Midgut
 
 618.9
Larval Hindgut
 
 579.1
Larval Malpighian Tubules
 
 535.4
Larval Fat Body
 
 760.5
Larval Salivary Gland
 (3628.3)
Larval Trachea
 
 936.875
Larval Carcass
 
 699.7
Adult Head
 
 437.7
Adult Eye
 
 836.025
Adult Brain
 
 331.1
Adult Thoracic-Abdominal Ganglion
 
 342.9
Adult Crop
 
 441.9
Adult Midgut
 
 610.6
Adult Hindgut
 
 410.8
Adult Malpighian Tubules
 
 346.9
Adult Fat Body
 
 606.4
Adult Salivary Gland
 (2124.4)
Adult Heart
 
 737.675
Adult VirginFemale Spermatheca
 
 915
Adult InseminatedFemale Spermatheca
 1007.3
Adult Ovary
 
 305.3
Adult Testis
 
 114.2
Adult Male Accessory Gland
 (2034.2)
Adult Carcass
 
 449.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 393.7
Larval Midgut
 
 618.9
Larval Hindgut
 
 579.1
Larval Malpighian Tubules
 
 535.4
Larval Fat Body
 
 760.5
Larval Salivary Gland
 
 3628.3
Larval Trachea
 
 936.875
Larval Carcass
 
 699.7
Adult Head
 
 437.7
Adult Eye
 
 836.025
Adult Brain
 
 331.1
Adult Thoracic-Abdominal Ganglion
 
 342.9
Adult Crop
 
 441.9
Adult Midgut
 
 610.6
Adult Hindgut
 
 410.8
Adult Malpighian Tubules
 
 346.9
Adult Fat Body
 
 606.4
Adult Salivary Gland
 
 2124.4
Adult Heart
 
 737.675
Adult VirginFemale Spermatheca
 
 915
Adult InseminatedFemale Spermatheca
 
 1007.3
Adult Ovary
 
 305.3
Adult Testis
 
 114.2
Adult Male Accessory Gland
 
 2034.2
Adult Carcass
 
 449.3
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 437.7
 
NA 
Eye
 
 836.025
 
NA 
Brain
 
 331.1
 
393.7 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 342.9
 
NA 
Crop
 
 441.9
 
618.9 
Midgut
 
 610.6
 
579.1 
Hindgut
 
 410.8
 
535.4 
Malpighian Tubules
 
 346.9
 
760.5 
Fat Body
 
 606.4
 
3628.3 
Salivary Gland
 
 2124.4
 
NA 
Heart
 
 737.675
 
936.875 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 915
 
NA 
InseminatedFemale Spermatheca
 
 1007.3
 
NA 
Ovary
 
 305.3
 
NA 
Testis
 
 114.2
 
NA 
Male Accessory Gland
 
 2034.2
 
699.7 
Carcass
 
 449.3

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
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A cluster of genes with similar mRNA expression dynamics across development.
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FLIGHT - Cell culture data for RNAi and other high-throughput technologies
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Lethality
Allele
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Allele
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Allele
hide Classical Alleles ( 3 )
For All Classical Alleles Show

Allele of CHOp24ClassMutagenStocksKnown lesion
CHOp24e045263 --
CHOp24e045671 --
CHOp24e046010 --
hide Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show

Allele of CHOp24ClassMutagenStocksKnown lesion
CHOp24GD32252 Yes
CHOp24KK1073841 Yes
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characterization construct
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References
inferred from electronic annotation with InterPro:IPR009038
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CV term
References
inferred from sequence or structural similarity with UniProtKB:Q63524
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Interacts with
Please look at the allele data for full details of the genetic interactions
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BioGRID - A database of protein and genetic interactions
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hide Orthologs
Genome-wide drosophilid orthologs
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Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
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cDNA Clones, End Sequenced (ESTs)
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Source for database identity of
Source for identity of: CHOp24 CG3564
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Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
GOLD (IPR009038)
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
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Symbol Synonym
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hide Recent research papers ( 3 )
Port et al., 2011, EMBO Rep. 12(11): 1144--1152
A genome-wide RNA interference screen uncovers two p24 proteins as regulators of Wingless secretion. [FBrf0216532]
Blanco et al., 2010, BMC Dev. Biol. 10: 94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
Fox et al., 2010, J. Cell Biol. 191(3): 479--492
The CrebA/Creb3-like transcription factors are major and direct regulators of secretory capacity. [FBrf0212217]
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All reviews listed in FlyBase were published before 2010