• Home
• Tools
  • Tools Overview
  • Query Tools

    
    • QuickSearch
    • QueryBuilder
    • TermLink
    • CytoSearch
    • Interactions Browser
    • ImageBrowse
    • Find A Person
    • Google™ FlyBase
  • Genomic/Map Tools

    
    • BLAST
    • GBrowse
    • CytoSearch
    • Aberrations Maps
    • Chromosome Maps
    • Coordinates Converter
  • Retrieve/Convert

    
    • Batch Download
    • Coordinates Converter
    • ID Converter
  • Data Submission

    
    • Fast-Track Your Paper
    • Submit Personal Comm
    • Add A New Person
    • Update Person Info
  • People

    
    • Find A Person
    • Add A New Person
    • Update Person Info
• Files
  • Files Overview
  • Downloads:
  • Precomputed files
  • Archived data
  • Releases (FTP)
  • Genomes (FTP)
  • AAA data (FTP)
  • Lists:
  • Transposons (Dmel)
  • Transposons (other)
  • Vectors & Constructs
  • Anatomical Terms
  • Map Conversion
• Species
  • Phylogeny
  • Sequenced Species
  • Synteny Table
  • Color Illustrations
  • Abbreviations
• Documents
  • About FlyBase
  • Reference Manual:
  • Sections
  • Contents
  • Nomenclature
  • Release Notes
• Resources
  • All Resources
  • Model Organisms
  • Stock Collections
  • Other links:
  • BDGP
  • DGRC
  • FlyExpress
  • Interactive Fly
  • modENCODE
  • Textpresso for Fly
• News
  • News
  • FlyBase Forum
  • FlyBase Positions
  • Meetings
  • Courses
  • Fly Board
  • White papers
  • Funding
  • bionet.dros
• Help
  • Google™ FlyBase
  • Site Map
  • FAQs
  • FlyBase Guides
  • Video Tutorials
  • Report help
  • New to Flies
  • Pers. comm.
  • Author guidelines
  • Contact FlyBase
• Archives
  • Prior Release
  • Other Archives
  • Coordinate Converter

Gene Dmel\CG3168

General Information
Symbol	Dmel\CG3168	Species	D. melanogaster
Name		Annotation symbol	CG3168
Feature type	protein_coding_gene	FlyBase ID	FBgn0029896
Gene Model Status	Current	Stock availability	7 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	6C9-6C10	Sequence location	X:6,614,508..6,634,019 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG3168 (FBgn0029896). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: transmembrane transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: transmembrane transport. 8 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. Protein features are: General substrate transporter; Major facilitator superfamily; Major facilitator superfamily domain; Major facilitator superfamily domain, general substrate transporter; Sugar transporter, conserved site. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of extremely low expression. Peak expression observed during early pupal stages, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult hindgut, larval/adult Malpighian tubules, larval fat body, larval salivary gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult crop, larval hindgut, adult heart, adult fat body, virgin spermatheca, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1641320_s_at completely aligns to an exonic region common to each of the 3 FlyBase-annotated transcript isoforms of CG3168. Gene sequence location is X:6614508..6634019.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN22120 HFA18287
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 6C9-6C10   Limits computationally determined from genome sequence between P{EP}Ctr1AEP1364&P{EP}EP1445 and P{EP}C3GEP1613
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG3168 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG3168-RA FBtr0070985  NM_132117   3291   632 CG3168-RB FBtr0070986  NM_167085   3239   632 CG3168-RC FBtr0070984  NM_167086   3610   632
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG3168-PA   FBpp0070945   69.0   632   8.03     NP_572345   AAF46193 CG3168-PB   FBpp0070946   69.0   632   8.03     NP_727116   AAN09180 CG3168-PC   FBpp0070944   69.0   632   8.03     NP_727117   AAN09181
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Sugar transporter, conserved site (IPR005829) Major facilitator superfamily (IPR011701) Major facilitator superfamily domain, general substrate transporter (IPR016196) General substrate transporter (IPR005828) Major facilitator superfamily domain (IPR020846)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA698464   AE014298 AAF46193   AE014298 AAN09180   AE014298 AAN09181   AI135952   AI257484   AI257817   AI260143   AI295221   AI297179   AI388711   AI406260   AI513553   AI517338   AW940523   BG639406   BI167264   BI167948   BI170021   BI170449   BI170511   BI231695   BI363709   BI366007   BI366628   BI373755   BI374415   BI566753   BI574948   BI575135   BI586694   BI593122   BI593390   BI608125   BI617180   BI621847   BI623068   BI623224   BI623448   BI627818   BI634230   BT031336   CA804233   CK658692   CK659336   CK661319   CO154524   CO181232   CO195328   CO267799   CO276547   CO276644   CO277981   CO280879   CO282029   CO288636   CO291867   CO295468   CO302126   CO307863   CO308681   CO314851   CO323934   CO332033   CO339376   CO341101   CZ472132   CZ482267   CZ482268   EC061745   EC066164   EC077372   EC084005   EC084842   EC086921   EC200845   EC201044   EC203803   EC207627   EC221209   EC222454   EC232185   EC243574   EC246691   EC248776   EC248785   EC253657   EL879758   EL880026   EL880155   EV576000   EV585518   EV590959   EV594214   EV594625   EV597154   EV599340   EV600156
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9W3W9
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0029896    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0029896 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of extremely low expression. Peak expression observed during early pupal stages, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0029896 expression level Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    26 embryo 04-06hr    101 embryo 06-08hr    431 embryo 08-10hr    443 embryo 10-12hr    412 embryo 12-14hr    502 embryo 14-16hr    955 embryo 16-18hr    1859 embryo 18-20hr    3475 embryo 20-22hr    7865 embryo 22-24hr    8401 larva L1    8670 larva L2    5524 larva L3 12hr old    6470 larva L3 puffstage 1-2    5143 larva L3 puffstage 3-6    5585 larva L3 puffstage 7-9    9232 white prepupae new    14568 white prepupae 12hr    10193 white prepupae 24hr    3999 pupae 2d postWPP    2075 pupae 3d postWPP    1371 pupae 4d postWPP    8042 adult male 01day    12415 adult male 05day    12822 adult male 30day    15927 adult female 01day    10672 adult female 05day    6618 adult female 30day    7154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    26 embryo 04-06hr  101 embryo 06-08hr  (431) embryo 08-10hr  (443) embryo 10-12hr  (412) embryo 12-14hr  (502) embryo 14-16hr  (955) embryo 16-18hr  (1859) embryo 18-20hr  (3475) embryo 20-22hr  (7865) embryo 22-24hr  (8401) larva L1  (8670) larva L2  (5524) larva L3 12hr old  (6470) larva L3 puffstage 1-2  (5143) larva L3 puffstage 3-6  (5585) larva L3 puffstage 7-9  (9232) white prepupae new  (14568) white prepupae 12hr  (10193) white prepupae 24hr  (3999) pupae 2d postWPP  (2075) pupae 3d postWPP  (1371) pupae 4d postWPP  (8042) adult male 01day  (12415) adult male 05day  (12822) adult male 30day  (15927) adult female 01day  (10672) adult female 05day  (6618) adult female 30day  (7154) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    26 embryo 04-06hr    101 embryo 06-08hr    431 embryo 08-10hr    443 embryo 10-12hr    412 embryo 12-14hr    502 embryo 14-16hr    955 embryo 16-18hr  (1859) embryo 18-20hr  (3475) embryo 20-22hr  (7865) embryo 22-24hr  (8401) larva L1  (8670) larva L2  (5524) larva L3 12hr old  (6470) larva L3 puffstage 1-2  (5143) larva L3 puffstage 3-6  (5585) larva L3 puffstage 7-9  (9232) white prepupae new  (14568) white prepupae 12hr  (10193) white prepupae 24hr  (3999) pupae 2d postWPP  (2075) pupae 3d postWPP    1371 pupae 4d postWPP  (8042) adult male 01day  (12415) adult male 05day  (12822) adult male 30day  (15927) adult female 01day  (10672) adult female 05day  (6618) adult female 30day  (7154) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    26 embryo 04-06hr    101 embryo 06-08hr    431 embryo 08-10hr    443 embryo 10-12hr    412 embryo 12-14hr    502 embryo 14-16hr    955 embryo 16-18hr    1859 embryo 18-20hr    3475 embryo 20-22hr    7865 embryo 22-24hr    8401 larva L1    8670 larva L2    5524 larva L3 12hr old    6470 larva L3 puffstage 1-2    5143 larva L3 puffstage 3-6    5585 larva L3 puffstage 7-9    9232 white prepupae new  (14568) white prepupae 12hr  10193 white prepupae 24hr    3999 pupae 2d postWPP    2075 pupae 3d postWPP    1371 pupae 4d postWPP    8042 adult male 01day  (12415) adult male 05day  (12822) adult male 30day  (15927) adult female 01day  10672 adult female 05day    6618 adult female 30day    7154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    26 embryo 04-06hr    101 embryo 06-08hr    431 embryo 08-10hr    443 embryo 10-12hr    412 embryo 12-14hr    502 embryo 14-16hr    955 embryo 16-18hr    1859 embryo 18-20hr    3475 embryo 20-22hr    7865 embryo 22-24hr    8401 larva L1    8670 larva L2    5524 larva L3 12hr old    6470 larva L3 puffstage 1-2    5143 larva L3 puffstage 3-6    5585 larva L3 puffstage 7-9    9232 white prepupae new    14568 white prepupae 12hr    10193 white prepupae 24hr    3999 pupae 2d postWPP    2075 pupae 3d postWPP    1371 pupae 4d postWPP    8042 adult male 01day    12415 adult male 05day    12822 adult male 30day    15927 adult female 01day    10672 adult female 05day    6618 adult female 30day    7154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0029896 expression level Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    26 embryo 04-06hr    101 embryo 06-08hr    431 embryo 08-10hr    443 embryo 10-12hr    412 embryo 12-14hr    502 embryo 14-16hr    955 embryo 16-18hr    1859 embryo 18-20hr    3475 embryo 20-22hr    7865 embryo 22-24hr    8401 larva L1    8670 larva L2    5524 larva L3 12hr old    6470 larva L3 puffstage 1-2    5143 larva L3 puffstage 3-6    5585 larva L3 puffstage 7-9    9232 white prepupae new    14568 white prepupae 12hr    10193 white prepupae 24hr    3999 pupae 2d postWPP    2075 pupae 3d postWPP    1371 pupae 4d postWPP    8042 adult male 01day    12415 adult male 05day    12822 adult male 30day    15927 adult female 01day    10672 adult female 05day    6618 adult female 30day    7154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    26 embryo 04-06hr  101 embryo 06-08hr  (431) embryo 08-10hr  (443) embryo 10-12hr  (412) embryo 12-14hr  (502) embryo 14-16hr  (955) embryo 16-18hr  (1859) embryo 18-20hr  (3475) embryo 20-22hr  (7865) embryo 22-24hr  (8401) larva L1  (8670) larva L2  (5524) larva L3 12hr old  (6470) larva L3 puffstage 1-2  (5143) larva L3 puffstage 3-6  (5585) larva L3 puffstage 7-9  (9232) white prepupae new  (14568) white prepupae 12hr  (10193) white prepupae 24hr  (3999) pupae 2d postWPP  (2075) pupae 3d postWPP  (1371) pupae 4d postWPP  (8042) adult male 01day  (12415) adult male 05day  (12822) adult male 30day  (15927) adult female 01day  (10672) adult female 05day  (6618) adult female 30day  (7154) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    26 embryo 04-06hr    101 embryo 06-08hr    431 embryo 08-10hr    443 embryo 10-12hr    412 embryo 12-14hr    502 embryo 14-16hr    955 embryo 16-18hr  1859 embryo 18-20hr  (3475) embryo 20-22hr  (7865) embryo 22-24hr  (8401) larva L1  (8670) larva L2  (5524) larva L3 12hr old  (6470) larva L3 puffstage 1-2  (5143) larva L3 puffstage 3-6  (5585) larva L3 puffstage 7-9  (9232) white prepupae new  (14568) white prepupae 12hr  (10193) white prepupae 24hr  (3999) pupae 2d postWPP  2075 pupae 3d postWPP    1371 pupae 4d postWPP  (8042) adult male 01day  (12415) adult male 05day  (12822) adult male 30day  (15927) adult female 01day  (10672) adult female 05day  (6618) adult female 30day  (7154) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    26 embryo 04-06hr    101 embryo 06-08hr    431 embryo 08-10hr    443 embryo 10-12hr    412 embryo 12-14hr    502 embryo 14-16hr    955 embryo 16-18hr    1859 embryo 18-20hr    3475 embryo 20-22hr    7865 embryo 22-24hr    8401 larva L1    8670 larva L2    5524 larva L3 12hr old    6470 larva L3 puffstage 1-2    5143 larva L3 puffstage 3-6    5585 larva L3 puffstage 7-9    9232 white prepupae new  14568 white prepupae 12hr  10193 white prepupae 24hr    3999 pupae 2d postWPP    2075 pupae 3d postWPP    1371 pupae 4d postWPP    8042 adult male 01day  12415 adult male 05day  12822 adult male 30day  15927 adult female 01day  10672 adult female 05day    6618 adult female 30day    7154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    26 embryo 04-06hr    101 embryo 06-08hr    431 embryo 08-10hr    443 embryo 10-12hr    412 embryo 12-14hr    502 embryo 14-16hr    955 embryo 16-18hr    1859 embryo 18-20hr    3475 embryo 20-22hr    7865 embryo 22-24hr    8401 larva L1    8670 larva L2    5524 larva L3 12hr old    6470 larva L3 puffstage 1-2    5143 larva L3 puffstage 3-6    5585 larva L3 puffstage 7-9    9232 white prepupae new    14568 white prepupae 12hr    10193 white prepupae 24hr    3999 pupae 2d postWPP    2075 pupae 3d postWPP    1371 pupae 4d postWPP    8042 adult male 01day    12415 adult male 05day    12822 adult male 30day    15927 adult female 01day    10672 adult female 05day    6618 adult female 30day    7154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0029896    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0029896 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult hindgut, larval/adult Malpighian tubules, larval fat body, larval salivary gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult crop, larval hindgut, adult heart, adult fat body, virgin spermatheca, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0029896 expression level Tissue   Expression Level Larval Central Nervous System    582.1 Larval Midgut    86.6 Larval Hindgut    318.2 Larval Malpighian Tubules    5432.7 Larval Fat Body    883.3 Larval Salivary Gland    762.7 Larval Trachea    79.675 Larval Carcass    262 Adult Head    466.9 Adult Eye    291.8 Adult Brain    892.6 Adult Thoracic-Abdominal Ganglion    823.1 Adult Crop    119.9 Adult Midgut no informative data Adult Hindgut    548.3 Adult Malpighian Tubules    7340.4 Adult Fat Body    134.2 Adult Salivary Gland no informative data Adult Heart    454.05 Adult VirginFemale Spermatheca    105.2 Adult InseminatedFemale Spermatheca    65.6 Adult Ovary    77.7 Adult Testis    23.1 Adult Male Accessory Gland    49.5 Adult Carcass    253 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (582.1) Larval Midgut    86.6 Larval Hindgut    318.2 Larval Malpighian Tubules  (5432.7) Larval Fat Body  (883.3) Larval Salivary Gland  (762.7) Larval Trachea    79.675 Larval Carcass    262 Adult Head    466.9 Adult Eye    291.8 Adult Brain  (892.6) Adult Thoracic-Abdominal Ganglion  (823.1) Adult Crop    119.9 Adult Midgut no informative data Adult Hindgut  (548.3) Adult Malpighian Tubules  (7340.4) Adult Fat Body    134.2 Adult Salivary Gland no informative data Adult Heart    454.05 Adult VirginFemale Spermatheca    105.2 Adult InseminatedFemale Spermatheca    65.6 Adult Ovary    77.7 Adult Testis    23.1 Adult Male Accessory Gland    49.5 Adult Carcass    253 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    582.1 Larval Midgut    86.6 Larval Hindgut    318.2 Larval Malpighian Tubules  (5432.7) Larval Fat Body    883.3 Larval Salivary Gland    762.7 Larval Trachea    79.675 Larval Carcass    262 Adult Head    466.9 Adult Eye    291.8 Adult Brain    892.6 Adult Thoracic-Abdominal Ganglion    823.1 Adult Crop    119.9 Adult Midgut no informative data Adult Hindgut    548.3 Adult Malpighian Tubules  (7340.4) Adult Fat Body    134.2 Adult Salivary Gland no informative data Adult Heart    454.05 Adult VirginFemale Spermatheca    105.2 Adult InseminatedFemale Spermatheca    65.6 Adult Ovary    77.7 Adult Testis    23.1 Adult Male Accessory Gland    49.5 Adult Carcass    253 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    582.1 Larval Midgut    86.6 Larval Hindgut    318.2 Larval Malpighian Tubules    5432.7 Larval Fat Body    883.3 Larval Salivary Gland    762.7 Larval Trachea    79.675 Larval Carcass    262 Adult Head    466.9 Adult Eye    291.8 Adult Brain    892.6 Adult Thoracic-Abdominal Ganglion    823.1 Adult Crop    119.9 Adult Midgut no informative data Adult Hindgut    548.3 Adult Malpighian Tubules    7340.4 Adult Fat Body    134.2 Adult Salivary Gland no informative data Adult Heart    454.05 Adult VirginFemale Spermatheca    105.2 Adult InseminatedFemale Spermatheca    65.6 Adult Ovary    77.7 Adult Testis    23.1 Adult Male Accessory Gland    49.5 Adult Carcass    253 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0029896 expression level Tissue   Expression Level Larval Central Nervous System    582.1 Larval Midgut    86.6 Larval Hindgut    318.2 Larval Malpighian Tubules    5432.7 Larval Fat Body    883.3 Larval Salivary Gland    762.7 Larval Trachea    79.675 Larval Carcass    262 Adult Head    466.9 Adult Eye    291.8 Adult Brain    892.6 Adult Thoracic-Abdominal Ganglion    823.1 Adult Crop    119.9 Adult Midgut no informative data Adult Hindgut    548.3 Adult Malpighian Tubules    7340.4 Adult Fat Body    134.2 Adult Salivary Gland no informative data Adult Heart    454.05 Adult VirginFemale Spermatheca    105.2 Adult InseminatedFemale Spermatheca    65.6 Adult Ovary    77.7 Adult Testis    23.1 Adult Male Accessory Gland    49.5 Adult Carcass    253 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  582.1 Larval Midgut    86.6 Larval Hindgut    318.2 Larval Malpighian Tubules  (5432.7) Larval Fat Body  (883.3) Larval Salivary Gland  762.7 Larval Trachea    79.675 Larval Carcass    262 Adult Head    466.9 Adult Eye    291.8 Adult Brain  (892.6) Adult Thoracic-Abdominal Ganglion  (823.1) Adult Crop    119.9 Adult Midgut no informative data Adult Hindgut  548.3 Adult Malpighian Tubules  (7340.4) Adult Fat Body    134.2 Adult Salivary Gland no informative data Adult Heart    454.05 Adult VirginFemale Spermatheca    105.2 Adult InseminatedFemale Spermatheca    65.6 Adult Ovary    77.7 Adult Testis    23.1 Adult Male Accessory Gland    49.5 Adult Carcass    253 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    582.1 Larval Midgut    86.6 Larval Hindgut    318.2 Larval Malpighian Tubules  (5432.7) Larval Fat Body    883.3 Larval Salivary Gland    762.7 Larval Trachea    79.675 Larval Carcass    262 Adult Head    466.9 Adult Eye    291.8 Adult Brain    892.6 Adult Thoracic-Abdominal Ganglion    823.1 Adult Crop    119.9 Adult Midgut no informative data Adult Hindgut    548.3 Adult Malpighian Tubules  (7340.4) Adult Fat Body    134.2 Adult Salivary Gland no informative data Adult Heart    454.05 Adult VirginFemale Spermatheca    105.2 Adult InseminatedFemale Spermatheca    65.6 Adult Ovary    77.7 Adult Testis    23.1 Adult Male Accessory Gland    49.5 Adult Carcass    253 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    582.1 Larval Midgut    86.6 Larval Hindgut    318.2 Larval Malpighian Tubules    5432.7 Larval Fat Body    883.3 Larval Salivary Gland    762.7 Larval Trachea    79.675 Larval Carcass    262 Adult Head    466.9 Adult Eye    291.8 Adult Brain    892.6 Adult Thoracic-Abdominal Ganglion    823.1 Adult Crop    119.9 Adult Midgut no informative data Adult Hindgut    548.3 Adult Malpighian Tubules    7340.4 Adult Fat Body    134.2 Adult Salivary Gland no informative data Adult Heart    454.05 Adult VirginFemale Spermatheca    105.2 Adult InseminatedFemale Spermatheca    65.6 Adult Ovary    77.7 Adult Testis    23.1 Adult Male Accessory Gland    49.5 Adult Carcass    253 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut no informative data Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    466.9   NA  Eye    291.8   NA  Brain    892.6   582.1  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    823.1   NA  Crop    119.9   86.6  Midgut    no informative data   318.2  Hindgut    548.3   5432.7  Malpighian Tubules    7340.4   883.3  Fat Body    134.2   762.7  Salivary Gland    no informative data   NA  Heart    454.05   79.675  Trachea    NA   NA  VirginFemale Spermatheca    105.2   NA  InseminatedFemale Spermatheca    65.6   NA  Ovary    77.7   NA  Testis    23.1   NA  Male Accessory Gland    49.5   262  Carcass    253 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_10
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0029896 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG3168-RC FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG3168 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 6 )
For All Classical Alleles Show
Allele of CG3168 Class Mutagen Stocks Known lesion CG3168BG00892 1 -- CG3168BG01406 P-element activity 1 -- CG3168d01276 P-element activity 1 -- CG3168e04519 piggyBac transposase 1 -- CG3168BG00417 P-element activity 0 -- CG3168CB-5826-3 0 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG3168 Class Mutagen Stocks Known lesion CG3168GD3258 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG3168JF02441 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD3258} NA P{TRiP.JF02441} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{GT1}CG3168BG00417 NA P{GT1}CG3168BG00892 NA P{GT1}CG3168BG01406 NA P{RS3}CG3168CB-5826-3 NA PBac{RB}CG3168e04519 NA insertion of mobile activating element P{XP}CG3168d01276 NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
transmembrane transporter activity inferred from electronic annotation with InterPro:IPR005828 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
transmembrane transport inferred from electronic annotation with InterPro:IPR005828, InterPro:IPR005829, InterPro:IPR011701 (FlyBase Curators et al., 2004-)
Cellular Component
CV term Evidence References
integral to membrane inferred from electronic annotation with InterPro:IPR005828, InterPro:IPR011701 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG3168 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0029896 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 31612
Orthologs
Genome-wide drosophilid orthologs	Dana\GF20843 Dere\GG17659 Dgri\GH11966 Dmoj\GI15388 Dper\GL26881 Dpse\GA16389 Dsec\GM12555 Dsim\GD16183 Dvir\GJ16810 Dwil\GK16302 Dyak\GE16450
Curated drosophilid orthologs	Dpse\GA16389
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL005849-PA Aedes aegypti (mosquito) AGAP010892-PA Anopheles gambiae (mosquito) XP_393415.2 Apis mellifera (honey bee) XP_001948090.1 Acyrthosiphon pisum (pea aphid) 12850 Batrachochytrium dendrobatidis (chytrid fungus) 102736 Branchiostoma floridae (lancelet) BGIBMGA001498-PA Bombyx mori (silk worm) ENSBTAP00000036478 Bos taurus (bovine) CAL0002137 Candida albicans (a form of yeast) CAL0003288 Candida albicans (a form of yeast) ENSCAFP00000016624 Canis familiaris (dog) CAGL0B02475g Candida glabrata (haploid yeast) ENSCINP00000000831 Ciona intestinalis (sea squirt) cgd3_3100 Cryptosporidium parvum (protozoan parasite) CPIJ005417 Culex pipens (mosquito) ENSCPOP00000007697 Cavia porcellus (guinea pig) 152685 Chlamidomonas reinhardtii (green alga) ENSCSAVP00000013995 Ciona savignyi (sedentary tunicate) 18946 Capitella spl (polychaete worm) DEHA2E04730g Debaryomyces Hansenii (yeast) 304078 Daphnia pulex (daphnia) ENSDARP00000087165 Danio rerio (zebra fish) ENSECAP00000008995 Equus caballus (horse) NP_414587.1 Escherichia coli K12 (bacteria) NP_417251.2 Escherichia coli K12 (bacteria) XP_654379 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000009650 Gymnopilus aculeatus (mushroom) ENSGALP00000011089 Gallus gallus (chicken) 103014 Hypsipyla robusta (cedar shoot borer) ENSP00000316983 Homo sapiens (human) ISCW024324-PA Ixodes scapularis (deer tick) 191516 Lottia gigantea (owl limpet) 33459 Monocosta brevicollis (choanoflagellate) ENSMODP00000016652 Monodelphis domestica (gray opossum) ENSMMUP00000026140 Macaca mulatta (rhesus monkey) ENSMUSP00000052801 Mus musculus (house mouse) XP_001606406.1 Nasonia vitripennis (wasp) ENSOANP00000024850 Ornithorynchus anatinus (platypus) ENSORLP00000002458 Oryzias latipes (japanese killifish) PFB0275w Plasmodium falciparum (protozoal parasite) PHUM004538-PA Pediculus humanus (human body louse) ENSPPYP00000007707 Pongo pygmaeus (orangutan) 84871 Phytophthora ramorum (sudden oak death pathogen) 131478 Phytophthora sojae (root rot pathogen) ENSPTRP00000029115 Pan troglodytes (chimpanzee) ENSRNOP00000015084 Rattus norvegicus (norway rat) ENSRNOP00000024459 Rattus norvegicus (norway rat) XP_787750.2 Strongylocentrotus purpuratus (purple sea urchin) 36521 Trichoplax adhaerens (metazoa) XP_971503.1 Tribolium castaneum (red flour beetle) ENSTNIP00000011284 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000040506 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000016588 Xenopus tropicalis (frog) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB17375 NV13511 LH16651 ISCW024324 FBgn0233973 FBgn0218304 FBgn0203989 FBgn0187812 FBgn0167492 JGI_V11_304078 JGI_V11_304079 FBgn0076404 FBgn0164462 FBgn0138137 FBgn0119445 FBgn0109881 FBgn0097849 CPIJ005417 BGIBMGA001498 ACYPI54681 ACYPI008139 GB16424 AGAP010892 AAEL005849 PHUM413600 GLEAN_04597
Stocks & Reagents
Stocks Listed in FlyBase ( 7 )
Bloomington	12516 w1118 P{GT1}CG3168BG00892 12731 P{GT1}CG3168BG01406 w1118 29301 y1 v1; P{TRiP.JF02441}attP2
Harvard	- P{XP}CG3168d01276 - PBac{RB}CG3168e04519
VDRC	v48010 w1118; P{GD3258}v48010 v48011 w1118; P{GD3258}v48011
Genomic Clones ( 2 )
	BACR11K20 BACR48O24 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 89 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LP17136
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH19693 GH26496 GH26679 GH28052 HL04728 LP03836 LP05868 LP11426 LP15842 LP17035 LP20729 RE07609 RE08466 RE11356 RE11893 RE11993 RE23314 RE48634 RE51434 RE52207 RE61155 RE61995 RH11040 RH11421 RH12292 RH26779 RH27502 RH28409 RH36487 RH37663 RH47427 RH53267 RH55137 RH55325 RH55704 RH69260
Other clones	669 849 16480 29235 38818 41985 44448 65489 66172 70667 77042 118624 118745 145972 149768 156379 214575.4 CK01.87B.G5 Dmel_dig_006572_0720_0464 Dmel_dig_006703_0656_3213 Dmel_neb_005649_0342_2440 Dmel_neb_009989_0856_0861 Dmel_neb_010815_0582_0987 Dmel_neb_012912_0574_3223 Dmel_neb_013141_0861_1731 Dmel_neb_013996_0828_3597 EC13839 EC40059 EK069027 EK121264 EK121737 EK127949 EK151854 EK155320 EK159352 EK183208 EK192007 EK198546 EK209912 EK238036 EK255857 EK259111 EK302343 EN04307 EP01814 EP11855 ESG0112c.B21.1_G05 GH13883 IP09679 IP09879 IP09979 LP08790
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0029896 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 31612
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	Identified with: LP06294.5prime <up>FlyBase curator comment: EST subsequently found to be chimeric</up>. (Oliver, 2001.8.16) EST LP06294 is chimeric; the 3' portion corresponds to part of CG3168, while the 5' portion matches 18SrRNA sequences (but on the wrong strand). (FlyBase, 1996-)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_132117 NM_167085 NM_167086 RefSeq (Proteins) • NP_572345 NP_727116 NP_727117 DDBJ / EMBL / GenBank • AAF46193 AAN09180 AAN09181 AI135952 AI257817 AW940523 CZ472132 CZ482267 CZ482268 Entrez Gene - A searchable database of RefSeq genes. • 31612 UniProtKB/TrEMBL • Q9W3W9
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Sugar transporter, conserved site (IPR005829) Major facilitator superfamily (IPR011701) Major facilitator superfamily domain, general substrate transporter (IPR016196) General substrate transporter (IPR005828) Major facilitator superfamily domain (IPR020846)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0029896 DRSC - Results from RNAi screens. • FBgn0029896 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0029896 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG3168-RC FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0029896 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 31612 InParanoid A subset of ortholog calls from InParanoid. • AAEL005849-PA Aedes aegypti (mosquito) AGAP010892-PA Anopheles gambiae (mosquito) XP_393415.2 Apis mellifera (honey bee) XP_001948090.1 Acyrthosiphon pisum (pea aphid) 12850 Batrachochytrium dendrobatidis (chytrid fungus) 102736 Branchiostoma floridae (lancelet) BGIBMGA001498-PA Bombyx mori (silk worm) ENSBTAP00000036478 Bos taurus (bovine) CAL0002137 Candida albicans (a form of yeast) CAL0003288 Candida albicans (a form of yeast) ENSCAFP00000016624 Canis familiaris (dog) CAGL0B02475g Candida glabrata (haploid yeast) ENSCINP00000000831 Ciona intestinalis (sea squirt) cgd3_3100 Cryptosporidium parvum (protozoan parasite) CPIJ005417 Culex pipens (mosquito) ENSCPOP00000007697 Cavia porcellus (guinea pig) 152685 Chlamidomonas reinhardtii (green alga) ENSCSAVP00000013995 Ciona savignyi (sedentary tunicate) 18946 Capitella spl (polychaete worm) DEHA2E04730g Debaryomyces Hansenii (yeast) 304078 Daphnia pulex (daphnia) ENSDARP00000087165 Danio rerio (zebra fish) ENSECAP00000008995 Equus caballus (horse) NP_414587.1 Escherichia coli K12 (bacteria) NP_417251.2 Escherichia coli K12 (bacteria) XP_654379 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000009650 Gymnopilus aculeatus (mushroom) ENSGALP00000011089 Gallus gallus (chicken) 103014 Hypsipyla robusta (cedar shoot borer) ENSP00000316983 Homo sapiens (human) ISCW024324-PA Ixodes scapularis (deer tick) 191516 Lottia gigantea (owl limpet) 33459 Monocosta brevicollis (choanoflagellate) ENSMODP00000016652 Monodelphis domestica (gray opossum) ENSMMUP00000026140 Macaca mulatta (rhesus monkey) ENSMUSP00000052801 Mus musculus (house mouse) XP_001606406.1 Nasonia vitripennis (wasp) ENSOANP00000024850 Ornithorynchus anatinus (platypus) ENSORLP00000002458 Oryzias latipes (japanese killifish) PFB0275w Plasmodium falciparum (protozoal parasite) PHUM004538-PA Pediculus humanus (human body louse) ENSPPYP00000007707 Pongo pygmaeus (orangutan) 84871 Phytophthora ramorum (sudden oak death pathogen) 131478 Phytophthora sojae (root rot pathogen) ENSPTRP00000029115 Pan troglodytes (chimpanzee) ENSRNOP00000015084 Rattus norvegicus (norway rat) ENSRNOP00000024459 Rattus norvegicus (norway rat) XP_787750.2 Strongylocentrotus purpuratus (purple sea urchin) 36521 Trichoplax adhaerens (metazoa) XP_971503.1 Tribolium castaneum (red flour beetle) ENSTNIP00000011284 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000040506 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000016588 Xenopus tropicalis (frog) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 31612 modMine - Data generated by the modENCODE project. • FBgn0029896 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB17375 NV13511 LH16651 ISCW024324 FBgn0233973 FBgn0218304 FBgn0203989 FBgn0187812 FBgn0167492 JGI_V11_304078 JGI_V11_304079 FBgn0076404 FBgn0164462 FBgn0138137 FBgn0119445 FBgn0109881 FBgn0097849 CPIJ005417 BGIBMGA001498 ACYPI54681 ACYPI008139 GB16424 AGAP010892 AAEL005849 PHUM413600 GLEAN_04597
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	BEST:LP06294   CG3168 (Wang et al., 2004, Altenhein et al., 2006, Wang et al., 2004, Brandt et al., 2008, Perkins et al., 2009) LP06294.5prime (Oliver, 2001.8.16)
Name Synonym
Secondary FlyBase IDs
	FBgn0046238
References ( 20 )
Research paper	Brandt et al., 2008, Genetics 180(3): 1671--1678 Use of a Drosophila model to identify genes regulating Plasmodium growth in the mosquito. [FBrf0207038] Altenhein et al., 2006, Dev. Biol. 296(2): 545--560 Expression profiling of glial genes during Drosophila embryogenesis. [FBrf0195367] Kearney et al., 2004, Dev. Biol. 275(2): 473--492 Gene expression profiling of the developing Drosophila CNS midline cells. [FBrf0180108] Wang et al., 2004, GenomeBiol. 5(9): R69 Function-informed transcriptome analysis of Drosophila renal tubule. [FBrf0180324] Wang et al., 2004, J. Neurosci. 24(19): 4518--4529 A Drosophila temperature-sensitive seizure mutant in phosphoglycerate kinase disrupts ATP generation and alters synaptic function. [FBrf0174860]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979]
Personal communication to FlyBase	Perkins et al., 2009, Update to TRiP stock collection. Update to TRiP stock collection. [FBrf0208864] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Levis, 2001.1.10, FlyBase error report for CG3168 on Wed Jan 10 17:56:05 2001. FlyBase error report for CG3168 on Wed Jan 10 17:56:05 2001. [FBrf0133240] Oliver, 2001.8.16, File from B. Oliver containing information on ESTs expressed in the Drosophila testis, described in Andrews et al., 2000, Genome Res. 10(12): 2030-2043 (FBrf0132348). File from B. Oliver containing information on ESTs expressed in the Drosophila testis, described in Andrews et al., 2000, Genome Res. 10(12): 2030-2043 (FBrf0132348). [FBrf0137492] Verstreken and Bellen, 2000.9.4, New genes and synaptic vesicle cycle proteins. New genes and synaptic vesicle cycle proteins. [FBrf0131218]
FlyBase analysis	FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955] FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Ketchum, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126677]