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Gene Dmel\Ubc-E2H

General Information
Symbol	Dmel\Ubc-E2H	Species	D. melanogaster
Name	Ubc-E2H	Annotation symbol	CG2257
Feature type	protein_coding_gene	FlyBase ID	FBgn0029996
Gene Model Status	Current	Stock availability	6 publicly available
Also Known As	dUbc-E2H
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	7D6-7D6	Sequence location	X:7,981,596..7,988,097 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Ubc-E2H is referred to in FlyBase by the symbol Dmel\Ubc-E2H (CG2257, FBgn0029996). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: ubiquitin-protein ligase activity. There is experimental evidence that it is involved in the biological process: lateral inhibition. 7 alleles are reported. The phenotype of these alleles is annotated with: mesothoracic tergum. It has 3 annotated transcripts and 3 annotated polypeptides. Protein features are: Ubiquitin-conjugating enzyme, E2; Ubiquitin-conjugating enzyme, active site; Ubiquitin-conjugating enzyme/RWD-like. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: adult eye, adult brain, larval midgut, larval Malpighian tubules, larval/adult fat body, adult salivary gland, adult ovary, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, larval salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1629843_s_at completely aligns to an exonic region common to each of the 3 FlyBase-annotated transcript isoforms of Ubc-E2H. Gene sequence location is X:7981596..7988097.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 7D6-7D6   Limits computationally determined from genome sequence between P{EP}snEP1217 and P{EP}Ubc-E2HEP1303
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Ubc-E2H for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.50 Annotated transcripts do not represent all supported alternative splices within 5' UTR. Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Ubc-E2H-RA FBtr0071112  NM_167145   2875   183 Ubc-E2H-RB FBtr0071114  NM_132210   2292   183 Ubc-E2H-RC FBtr0071113  NM_167146   2328   183
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Ubc-E2H-PA   FBpp0071067   20.9   183   4.41     NP_727233   AAF46319 Ubc-E2H-PB   FBpp0071069   20.9   183   4.41     NP_572438   AAF46318 Ubc-E2H-PC   FBpp0071068   20.9   183   4.41     NP_727234   AAN09227
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Ubiquitin-conjugating enzyme, E2 (IPR000608) Ubiquitin-conjugating enzyme/RWD-like (IPR016135) Ubiquitin-conjugating enzyme, active site (IPR023313)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA201390   AA202788   AA203018   AA246689   AA246947   AA263444   AA263847   AA391098   AA391215   AA391334   AA391407   AA440010   AA441330   AA536410   AA539125   AA539175   AA539697   AA540415   AA540448   AA735286   AA735305   AA816310   AE014298 AAF46318   AE014298 AAF46319   AE014298 AAN09227   AI062496   AI257874   AI515874   AQ073175   AW942285   AW942464   AY061237 AAL28785   AY118510 AAM49879   BI164552   BI166914   BI167208   BI168176   BI168711   BI168796   BI171208   BI172741   BI212740   BI213182   BI213888   BI214690   BI216107   BI216149   BI216163   BI216736   BI229478   BI229673   BI229987   BI230029   BI232047   BI233008   BI235957   BI239234   BI363023   BI363235   BI363447   BI363589   BI363768   BI364339   BI364467   BI365137   BI365335   BI365924   BI366654   BI367807   BI369190   BI369198   BI369646   BI370067   BI370155   BI370156   BI370361   BI371301   BI372906   BI373803   BI373887   BI374713   BI375227   BI375767   BI375817   BI482194   BI483566   BI484670   BI484696   BI484757   BI485830   BI486305   BI486763   BI577559   BI578365   BI579304   BI579401   BI579589   BI588735   BI607110   BI607340   BI622209   BI623112   BI634696   BQ103712   CA805142   CO188310   CO191070   CO192020   CO262970   CO263510   CO264831   CO269151   CO271240   CO272688   CO272706   CO272884   CO273590   CO273630   CO274750   CO275368   CO275790   CO277412   CO278303   CO278319   CO281276   CO290341   CO290769   CO294620   CO299786   CO302470   CO312140   CO312423   CO314614   CO317483   CO319951   CO320352   CO323550   CO330303   CO345483   CZ476395   CZ490155   DQ138710 ABA86316   EC059341   EC060969   EC061403   EC066730   EC070674   EC070675   EC072364   EC073252   EC078668   EC082219   EC083316   EC083558   EC084055   EC087231   EC087531   EC195632   EC197491   EC198053   EC198058   EC201212   EC204601   EC207054   EC209259   EC209492   EC211993   EC213583   EC213605   EC216294   EC219201   EC221007   EC221535   EC225858   EC228017   EC231682   EC236586   EC237182   EC237543   EC237968   EC238765   EC241034   EC242325   EC243263   EC244440   EC245936   EC249946   EC259770   EV576797   EV579968   EV584534   EV593674   EV596611
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q7JW03 Q2XYF2
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: adult eye, adult brain, larval midgut, larval Malpighian tubules, larval/adult fat body, adult salivary gland, adult ovary, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, adult midgut, larval/adult hindgut, adult Malpighian tubules, adult heart, larval salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    258.55 Larval Midgut    528.8 Larval Hindgut    381 Larval Malpighian Tubules    901.4 Larval Fat Body    784.2 Larval Salivary Gland    230.4 Larval Trachea    232.125 Larval Carcass    435.225 Adult Head    475.5 Adult Eye    524.275 Adult Brain    523.9 Adult Thoracic-Abdominal Ganglion    395 Adult Crop    479.4 Adult Midgut    493.1 Adult Hindgut    442.3 Adult Malpighian Tubules    438.9 Adult Fat Body    764.5 Adult Salivary Gland    512.2 Adult Heart    470.175 Adult VirginFemale Spermatheca    491.4 Adult InseminatedFemale Spermatheca    434.3 Adult Ovary    1226.3 Adult Testis    70.7 Adult Male Accessory Gland    372 Adult Carcass    697.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    258.55 Larval Midgut  528.8 Larval Hindgut    381 Larval Malpighian Tubules  (901.4) Larval Fat Body  (784.2) Larval Salivary Gland    230.4 Larval Trachea    232.125 Larval Carcass    435.225 Adult Head    475.5 Adult Eye  524.275 Adult Brain  523.9 Adult Thoracic-Abdominal Ganglion    395 Adult Crop    479.4 Adult Midgut    493.1 Adult Hindgut    442.3 Adult Malpighian Tubules    438.9 Adult Fat Body  (764.5) Adult Salivary Gland  512.2 Adult Heart    470.175 Adult VirginFemale Spermatheca    491.4 Adult InseminatedFemale Spermatheca    434.3 Adult Ovary  (1226.3) Adult Testis    70.7 Adult Male Accessory Gland    372 Adult Carcass  (697.7) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    258.55 Larval Midgut    528.8 Larval Hindgut    381 Larval Malpighian Tubules    901.4 Larval Fat Body    784.2 Larval Salivary Gland    230.4 Larval Trachea    232.125 Larval Carcass    435.225 Adult Head    475.5 Adult Eye    524.275 Adult Brain    523.9 Adult Thoracic-Abdominal Ganglion    395 Adult Crop    479.4 Adult Midgut    493.1 Adult Hindgut    442.3 Adult Malpighian Tubules    438.9 Adult Fat Body    764.5 Adult Salivary Gland    512.2 Adult Heart    470.175 Adult VirginFemale Spermatheca    491.4 Adult InseminatedFemale Spermatheca    434.3 Adult Ovary  (1226.3) Adult Testis    70.7 Adult Male Accessory Gland    372 Adult Carcass    697.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    258.55 Larval Midgut    528.8 Larval Hindgut    381 Larval Malpighian Tubules    901.4 Larval Fat Body    784.2 Larval Salivary Gland    230.4 Larval Trachea    232.125 Larval Carcass    435.225 Adult Head    475.5 Adult Eye    524.275 Adult Brain    523.9 Adult Thoracic-Abdominal Ganglion    395 Adult Crop    479.4 Adult Midgut    493.1 Adult Hindgut    442.3 Adult Malpighian Tubules    438.9 Adult Fat Body    764.5 Adult Salivary Gland    512.2 Adult Heart    470.175 Adult VirginFemale Spermatheca    491.4 Adult InseminatedFemale Spermatheca    434.3 Adult Ovary    1226.3 Adult Testis    70.7 Adult Male Accessory Gland    372 Adult Carcass    697.7 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    258.55 Larval Midgut    528.8 Larval Hindgut    381 Larval Malpighian Tubules    901.4 Larval Fat Body    784.2 Larval Salivary Gland    230.4 Larval Trachea    232.125 Larval Carcass    435.225 Adult Head    475.5 Adult Eye    524.275 Adult Brain    523.9 Adult Thoracic-Abdominal Ganglion    395 Adult Crop    479.4 Adult Midgut    493.1 Adult Hindgut    442.3 Adult Malpighian Tubules    438.9 Adult Fat Body    764.5 Adult Salivary Gland    512.2 Adult Heart    470.175 Adult VirginFemale Spermatheca    491.4 Adult InseminatedFemale Spermatheca    434.3 Adult Ovary    1226.3 Adult Testis    70.7 Adult Male Accessory Gland    372 Adult Carcass    697.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    258.55 Larval Midgut  528.8 Larval Hindgut    381 Larval Malpighian Tubules  (901.4) Larval Fat Body  784.2 Larval Salivary Gland    230.4 Larval Trachea    232.125 Larval Carcass    435.225 Adult Head    475.5 Adult Eye  524.275 Adult Brain  523.9 Adult Thoracic-Abdominal Ganglion    395 Adult Crop    479.4 Adult Midgut    493.1 Adult Hindgut    442.3 Adult Malpighian Tubules    438.9 Adult Fat Body  764.5 Adult Salivary Gland  512.2 Adult Heart    470.175 Adult VirginFemale Spermatheca    491.4 Adult InseminatedFemale Spermatheca    434.3 Adult Ovary  (1226.3) Adult Testis    70.7 Adult Male Accessory Gland    372 Adult Carcass  697.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    258.55 Larval Midgut    528.8 Larval Hindgut    381 Larval Malpighian Tubules    901.4 Larval Fat Body    784.2 Larval Salivary Gland    230.4 Larval Trachea    232.125 Larval Carcass    435.225 Adult Head    475.5 Adult Eye    524.275 Adult Brain    523.9 Adult Thoracic-Abdominal Ganglion    395 Adult Crop    479.4 Adult Midgut    493.1 Adult Hindgut    442.3 Adult Malpighian Tubules    438.9 Adult Fat Body    764.5 Adult Salivary Gland    512.2 Adult Heart    470.175 Adult VirginFemale Spermatheca    491.4 Adult InseminatedFemale Spermatheca    434.3 Adult Ovary  1226.3 Adult Testis    70.7 Adult Male Accessory Gland    372 Adult Carcass    697.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    258.55 Larval Midgut    528.8 Larval Hindgut    381 Larval Malpighian Tubules    901.4 Larval Fat Body    784.2 Larval Salivary Gland    230.4 Larval Trachea    232.125 Larval Carcass    435.225 Adult Head    475.5 Adult Eye    524.275 Adult Brain    523.9 Adult Thoracic-Abdominal Ganglion    395 Adult Crop    479.4 Adult Midgut    493.1 Adult Hindgut    442.3 Adult Malpighian Tubules    438.9 Adult Fat Body    764.5 Adult Salivary Gland    512.2 Adult Heart    470.175 Adult VirginFemale Spermatheca    491.4 Adult InseminatedFemale Spermatheca    434.3 Adult Ovary    1226.3 Adult Testis    70.7 Adult Male Accessory Gland    372 Adult Carcass    697.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    475.5   NA  Eye    524.275   NA  Brain    523.9   258.55  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    395   NA  Crop    479.4   528.8  Midgut    493.1   381  Hindgut    442.3   901.4  Malpighian Tubules    438.9   784.2  Fat Body    764.5   230.4  Salivary Gland    512.2   NA  Heart    470.175   232.125  Trachea    NA   NA  VirginFemale Spermatheca    491.4   NA  InseminatedFemale Spermatheca    434.3   NA  Ovary    1226.3   NA  Testis    70.7   NA  Male Accessory Gland    372   435.225  Carcass    697.7 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    60 central nervous system, pupae P8    63 head, virgin 1-day female    86 head, virgin 4-day female    77 head, virgin 20-day female    30 head, mated 1-day female    106 head, mated 4-day female    65 head, mated 20-day female    41 head, mated 1-day male    82 head, mated 4-day male    78 head, mated 20-day male    53 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    52 digestive system, larvae L3 wandering    178 digestive system, 1-day adult    38 digestive system, 4-day adult    55 digestive system, 20-day adult    39 fat body, larvae L3 wandering    43 fat body, white prepupae    123 fat body, pupae P8    65 carcass, larvae L3 wandering    60 carcass, 1-day adult    81 carcass, 4-day adult    74 carcass, 20-day adult    54 ovary, virgin 4-day female    284 ovary, mated 4-day female    341 testis, mated 4-day male    6 accessory gland, mated 4-day male    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (29) central nervous system, larvae L3  (60) central nervous system, pupae P8  (63) head, virgin 1-day female  (86) head, virgin 4-day female  (77) head, virgin 20-day female  (30) head, mated 1-day female  (106) head, mated 4-day female  (65) head, mated 20-day female  (41) head, mated 1-day male  (82) head, mated 4-day male  (78) head, mated 20-day male  (53) salivary gland, larvae L3 wandering    16 salivary gland, white prepupae  (52) digestive system, larvae L3 wandering  (178) digestive system, 1-day adult  (38) digestive system, 4-day adult  (55) digestive system, 20-day adult  (39) fat body, larvae L3 wandering  (43) fat body, white prepupae  (123) fat body, pupae P8  (65) carcass, larvae L3 wandering  (60) carcass, 1-day adult  (81) carcass, 4-day adult  (74) carcass, 20-day adult  (54) ovary, virgin 4-day female  (284) ovary, mated 4-day female  (341) testis, mated 4-day male    6 accessory gland, mated 4-day male    17 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    60 central nervous system, pupae P8    63 head, virgin 1-day female    86 head, virgin 4-day female    77 head, virgin 20-day female    30 head, mated 1-day female  106 head, mated 4-day female    65 head, mated 20-day female    41 head, mated 1-day male    82 head, mated 4-day male    78 head, mated 20-day male    53 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    52 digestive system, larvae L3 wandering  (178) digestive system, 1-day adult    38 digestive system, 4-day adult    55 digestive system, 20-day adult    39 fat body, larvae L3 wandering    43 fat body, white prepupae  (123) fat body, pupae P8    65 carcass, larvae L3 wandering    60 carcass, 1-day adult    81 carcass, 4-day adult    74 carcass, 20-day adult    54 ovary, virgin 4-day female  (284) ovary, mated 4-day female  (341) testis, mated 4-day male    6 accessory gland, mated 4-day male    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    60 central nervous system, pupae P8    63 head, virgin 1-day female    86 head, virgin 4-day female    77 head, virgin 20-day female    30 head, mated 1-day female    106 head, mated 4-day female    65 head, mated 20-day female    41 head, mated 1-day male    82 head, mated 4-day male    78 head, mated 20-day male    53 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    52 digestive system, larvae L3 wandering    178 digestive system, 1-day adult    38 digestive system, 4-day adult    55 digestive system, 20-day adult    39 fat body, larvae L3 wandering    43 fat body, white prepupae    123 fat body, pupae P8    65 carcass, larvae L3 wandering    60 carcass, 1-day adult    81 carcass, 4-day adult    74 carcass, 20-day adult    54 ovary, virgin 4-day female    284 ovary, mated 4-day female    341 testis, mated 4-day male    6 accessory gland, mated 4-day male    17 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    60 central nervous system, pupae P8    63 head, virgin 1-day female    86 head, virgin 4-day female    77 head, virgin 20-day female    30 head, mated 1-day female    106 head, mated 4-day female    65 head, mated 20-day female    41 head, mated 1-day male    82 head, mated 4-day male    78 head, mated 20-day male    53 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    52 digestive system, larvae L3 wandering    178 digestive system, 1-day adult    38 digestive system, 4-day adult    55 digestive system, 20-day adult    39 fat body, larvae L3 wandering    43 fat body, white prepupae    123 fat body, pupae P8    65 carcass, larvae L3 wandering    60 carcass, 1-day adult    81 carcass, 4-day adult    74 carcass, 20-day adult    54 ovary, virgin 4-day female    284 ovary, mated 4-day female    341 testis, mated 4-day male    6 accessory gland, mated 4-day male    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  29 central nervous system, larvae L3  (60) central nervous system, pupae P8  (63) head, virgin 1-day female  (86) head, virgin 4-day female  (77) head, virgin 20-day female  30 head, mated 1-day female  (106) head, mated 4-day female  (65) head, mated 20-day female  (41) head, mated 1-day male  (82) head, mated 4-day male  (78) head, mated 20-day male  (53) salivary gland, larvae L3 wandering    16 salivary gland, white prepupae  (52) digestive system, larvae L3 wandering  (178) digestive system, 1-day adult  (38) digestive system, 4-day adult  (55) digestive system, 20-day adult  (39) fat body, larvae L3 wandering  (43) fat body, white prepupae  (123) fat body, pupae P8  (65) carcass, larvae L3 wandering  (60) carcass, 1-day adult  (81) carcass, 4-day adult  (74) carcass, 20-day adult  (54) ovary, virgin 4-day female  (284) ovary, mated 4-day female  (341) testis, mated 4-day male    6 accessory gland, mated 4-day male    17 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    60 central nervous system, pupae P8    63 head, virgin 1-day female    86 head, virgin 4-day female    77 head, virgin 20-day female    30 head, mated 1-day female  106 head, mated 4-day female    65 head, mated 20-day female    41 head, mated 1-day male    82 head, mated 4-day male    78 head, mated 20-day male    53 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    52 digestive system, larvae L3 wandering  (178) digestive system, 1-day adult    38 digestive system, 4-day adult    55 digestive system, 20-day adult    39 fat body, larvae L3 wandering    43 fat body, white prepupae  123 fat body, pupae P8    65 carcass, larvae L3 wandering    60 carcass, 1-day adult    81 carcass, 4-day adult    74 carcass, 20-day adult    54 ovary, virgin 4-day female  (284) ovary, mated 4-day female  (341) testis, mated 4-day male    6 accessory gland, mated 4-day male    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    60 central nervous system, pupae P8    63 head, virgin 1-day female    86 head, virgin 4-day female    77 head, virgin 20-day female    30 head, mated 1-day female    106 head, mated 4-day female    65 head, mated 20-day female    41 head, mated 1-day male    82 head, mated 4-day male    78 head, mated 20-day male    53 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    52 digestive system, larvae L3 wandering    178 digestive system, 1-day adult    38 digestive system, 4-day adult    55 digestive system, 20-day adult    39 fat body, larvae L3 wandering    43 fat body, white prepupae    123 fat body, pupae P8    65 carcass, larvae L3 wandering    60 carcass, 1-day adult    81 carcass, 4-day adult    74 carcass, 20-day adult    54 ovary, virgin 4-day female    284 ovary, mated 4-day female    341 testis, mated 4-day male    6 accessory gland, mated 4-day male    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    115 embryo 02-04hr    150 embryo 04-06hr    46 embryo 06-08hr    36 embryo 08-10hr    58 embryo 10-12hr    56 embryo 12-14hr    77 embryo 14-16hr    76 embryo 16-18hr    90 embryo 18-20hr    56 embryo 20-22hr    49 embryo 22-24hr    66 larva L1    16 larva L2    13 larva L3 12hr old    12 larva L3 puffstage 1-2    15 larva L3 puffstage 3-6    44 larva L3 puffstage 7-9    81 white prepupae new    83 white prepupae 12hr    45 white prepupae 24hr    42 pupae 2d postWPP    36 pupae 3d postWPP    33 pupae 4d postWPP    46 adult male 01day    41 adult male 05day    24 adult male 30day    20 adult female 01day    58 adult female 05day    75 adult female 30day    69 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (115) embryo 02-04hr  (150) embryo 04-06hr  (46) embryo 06-08hr  (36) embryo 08-10hr  (58) embryo 10-12hr  (56) embryo 12-14hr  (77) embryo 14-16hr  (76) embryo 16-18hr  (90) embryo 18-20hr  (56) embryo 20-22hr  (49) embryo 22-24hr  (66) larva L1    16 larva L2    13 larva L3 12hr old    12 larva L3 puffstage 1-2    15 larva L3 puffstage 3-6  (44) larva L3 puffstage 7-9  (81) white prepupae new  (83) white prepupae 12hr  (45) white prepupae 24hr  (42) pupae 2d postWPP  (36) pupae 3d postWPP  (33) pupae 4d postWPP  (46) adult male 01day  (41) adult male 05day    24 adult male 30day    20 adult female 01day  (58) adult female 05day  (75) adult female 30day  (69) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (115) embryo 02-04hr  (150) embryo 04-06hr    46 embryo 06-08hr    36 embryo 08-10hr    58 embryo 10-12hr    56 embryo 12-14hr    77 embryo 14-16hr    76 embryo 16-18hr    90 embryo 18-20hr    56 embryo 20-22hr    49 embryo 22-24hr    66 larva L1    16 larva L2    13 larva L3 12hr old    12 larva L3 puffstage 1-2    15 larva L3 puffstage 3-6    44 larva L3 puffstage 7-9    81 white prepupae new    83 white prepupae 12hr    45 white prepupae 24hr    42 pupae 2d postWPP    36 pupae 3d postWPP    33 pupae 4d postWPP    46 adult male 01day    41 adult male 05day    24 adult male 30day    20 adult female 01day    58 adult female 05day    75 adult female 30day    69 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    115 embryo 02-04hr    150 embryo 04-06hr    46 embryo 06-08hr    36 embryo 08-10hr    58 embryo 10-12hr    56 embryo 12-14hr    77 embryo 14-16hr    76 embryo 16-18hr    90 embryo 18-20hr    56 embryo 20-22hr    49 embryo 22-24hr    66 larva L1    16 larva L2    13 larva L3 12hr old    12 larva L3 puffstage 1-2    15 larva L3 puffstage 3-6    44 larva L3 puffstage 7-9    81 white prepupae new    83 white prepupae 12hr    45 white prepupae 24hr    42 pupae 2d postWPP    36 pupae 3d postWPP    33 pupae 4d postWPP    46 adult male 01day    41 adult male 05day    24 adult male 30day    20 adult female 01day    58 adult female 05day    75 adult female 30day    69 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    115 embryo 02-04hr    150 embryo 04-06hr    46 embryo 06-08hr    36 embryo 08-10hr    58 embryo 10-12hr    56 embryo 12-14hr    77 embryo 14-16hr    76 embryo 16-18hr    90 embryo 18-20hr    56 embryo 20-22hr    49 embryo 22-24hr    66 larva L1    16 larva L2    13 larva L3 12hr old    12 larva L3 puffstage 1-2    15 larva L3 puffstage 3-6    44 larva L3 puffstage 7-9    81 white prepupae new    83 white prepupae 12hr    45 white prepupae 24hr    42 pupae 2d postWPP    36 pupae 3d postWPP    33 pupae 4d postWPP    46 adult male 01day    41 adult male 05day    24 adult male 30day    20 adult female 01day    58 adult female 05day    75 adult female 30day    69 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (115) embryo 02-04hr  (150) embryo 04-06hr  (46) embryo 06-08hr  (36) embryo 08-10hr  (58) embryo 10-12hr  (56) embryo 12-14hr  (77) embryo 14-16hr  (76) embryo 16-18hr  (90) embryo 18-20hr  (56) embryo 20-22hr  (49) embryo 22-24hr  (66) larva L1    16 larva L2    13 larva L3 12hr old    12 larva L3 puffstage 1-2    15 larva L3 puffstage 3-6  (44) larva L3 puffstage 7-9  (81) white prepupae new  (83) white prepupae 12hr  (45) white prepupae 24hr  (42) pupae 2d postWPP  (36) pupae 3d postWPP  (33) pupae 4d postWPP  (46) adult male 01day  (41) adult male 05day    24 adult male 30day    20 adult female 01day  (58) adult female 05day  (75) adult female 30day  (69) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  115 embryo 02-04hr  (150) embryo 04-06hr    46 embryo 06-08hr    36 embryo 08-10hr    58 embryo 10-12hr    56 embryo 12-14hr    77 embryo 14-16hr    76 embryo 16-18hr    90 embryo 18-20hr    56 embryo 20-22hr    49 embryo 22-24hr    66 larva L1    16 larva L2    13 larva L3 12hr old    12 larva L3 puffstage 1-2    15 larva L3 puffstage 3-6    44 larva L3 puffstage 7-9    81 white prepupae new    83 white prepupae 12hr    45 white prepupae 24hr    42 pupae 2d postWPP    36 pupae 3d postWPP    33 pupae 4d postWPP    46 adult male 01day    41 adult male 05day    24 adult male 30day    20 adult female 01day    58 adult female 05day    75 adult female 30day    69 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    115 embryo 02-04hr    150 embryo 04-06hr    46 embryo 06-08hr    36 embryo 08-10hr    58 embryo 10-12hr    56 embryo 12-14hr    77 embryo 14-16hr    76 embryo 16-18hr    90 embryo 18-20hr    56 embryo 20-22hr    49 embryo 22-24hr    66 larva L1    16 larva L2    13 larva L3 12hr old    12 larva L3 puffstage 1-2    15 larva L3 puffstage 3-6    44 larva L3 puffstage 7-9    81 white prepupae new    83 white prepupae 12hr    45 white prepupae 24hr    42 pupae 2d postWPP    36 pupae 3d postWPP    33 pupae 4d postWPP    46 adult male 01day    41 adult male 05day    24 adult male 30day    20 adult female 01day    58 adult female 05day    75 adult female 30day    69 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    50 Schneider line 2 Sg4    16 embryonic 1182-4H    55 embryonic GM2    319 embryonic Kc167    176 embryonic S1    56 embryonic S3    27 leg disc CME L1    17 wing disc CME-W2    48 wing disc ML-DmD8    69 wing disc ML-DmD9    74 wing disc ML-DmD16-c3    80 wing disc ML-DmD21    53 wing disc ML-DmD32    90 haltere disc ML-DmD17-c3    93 eye-antennal disc ML-DmD11    79 antennal disc ML-DmD20-c5    37 mixed discs ML-DmD4-c1    70 CNS ML-DmBG1-c1    91 CNS ML-DmBG2-c2    87 tumorous blood cells mbn2    56 ovary fGS/OSS    179 ovary OSC    176 ovary OSS    127 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (50) Schneider line 2 Sg4    16 embryonic 1182-4H  (55) embryonic GM2  (319) embryonic Kc167  (176) embryonic S1  (56) embryonic S3  (27) leg disc CME L1    17 wing disc CME-W2  (48) wing disc ML-DmD8  (69) wing disc ML-DmD9  (74) wing disc ML-DmD16-c3  (80) wing disc ML-DmD21  (53) wing disc ML-DmD32  (90) haltere disc ML-DmD17-c3  (93) eye-antennal disc ML-DmD11  (79) antennal disc ML-DmD20-c5  (37) mixed discs ML-DmD4-c1  (70) CNS ML-DmBG1-c1  (91) CNS ML-DmBG2-c2  (87) tumorous blood cells mbn2  (56) ovary fGS/OSS  (179) ovary OSC  (176) ovary OSS  (127) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    50 Schneider line 2 Sg4    16 embryonic 1182-4H    55 embryonic GM2  (319) embryonic Kc167  (176) embryonic S1    56 embryonic S3    27 leg disc CME L1    17 wing disc CME-W2    48 wing disc ML-DmD8    69 wing disc ML-DmD9    74 wing disc ML-DmD16-c3    80 wing disc ML-DmD21    53 wing disc ML-DmD32    90 haltere disc ML-DmD17-c3    93 eye-antennal disc ML-DmD11    79 antennal disc ML-DmD20-c5    37 mixed discs ML-DmD4-c1    70 CNS ML-DmBG1-c1    91 CNS ML-DmBG2-c2    87 tumorous blood cells mbn2    56 ovary fGS/OSS  (179) ovary OSC  (176) ovary OSS  (127) Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    50 Schneider line 2 Sg4    16 embryonic 1182-4H    55 embryonic GM2    319 embryonic Kc167    176 embryonic S1    56 embryonic S3    27 leg disc CME L1    17 wing disc CME-W2    48 wing disc ML-DmD8    69 wing disc ML-DmD9    74 wing disc ML-DmD16-c3    80 wing disc ML-DmD21    53 wing disc ML-DmD32    90 haltere disc ML-DmD17-c3    93 eye-antennal disc ML-DmD11    79 antennal disc ML-DmD20-c5    37 mixed discs ML-DmD4-c1    70 CNS ML-DmBG1-c1    91 CNS ML-DmBG2-c2    87 tumorous blood cells mbn2    56 ovary fGS/OSS    179 ovary OSC    176 ovary OSS    127 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    50 Schneider line 2 Sg4    16 embryonic 1182-4H    55 embryonic GM2    319 embryonic Kc167    176 embryonic S1    56 embryonic S3    27 leg disc CME L1    17 wing disc CME-W2    48 wing disc ML-DmD8    69 wing disc ML-DmD9    74 wing disc ML-DmD16-c3    80 wing disc ML-DmD21    53 wing disc ML-DmD32    90 haltere disc ML-DmD17-c3    93 eye-antennal disc ML-DmD11    79 antennal disc ML-DmD20-c5    37 mixed discs ML-DmD4-c1    70 CNS ML-DmBG1-c1    91 CNS ML-DmBG2-c2    87 tumorous blood cells mbn2    56 ovary fGS/OSS    179 ovary OSC    176 ovary OSS    127 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (50) Schneider line 2 Sg4    16 embryonic 1182-4H  (55) embryonic GM2  (319) embryonic Kc167  (176) embryonic S1  (56) embryonic S3  27 leg disc CME L1    17 wing disc CME-W2  (48) wing disc ML-DmD8  (69) wing disc ML-DmD9  (74) wing disc ML-DmD16-c3  (80) wing disc ML-DmD21  (53) wing disc ML-DmD32  (90) haltere disc ML-DmD17-c3  (93) eye-antennal disc ML-DmD11  (79) antennal disc ML-DmD20-c5  (37) mixed discs ML-DmD4-c1  (70) CNS ML-DmBG1-c1  (91) CNS ML-DmBG2-c2  (87) tumorous blood cells mbn2  (56) ovary fGS/OSS  (179) ovary OSC  (176) ovary OSS  (127) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    50 Schneider line 2 Sg4    16 embryonic 1182-4H    55 embryonic GM2  (319) embryonic Kc167  (176) embryonic S1    56 embryonic S3    27 leg disc CME L1    17 wing disc CME-W2    48 wing disc ML-DmD8    69 wing disc ML-DmD9    74 wing disc ML-DmD16-c3    80 wing disc ML-DmD21    53 wing disc ML-DmD32    90 haltere disc ML-DmD17-c3    93 eye-antennal disc ML-DmD11    79 antennal disc ML-DmD20-c5    37 mixed discs ML-DmD4-c1    70 CNS ML-DmBG1-c1    91 CNS ML-DmBG2-c2    87 tumorous blood cells mbn2    56 ovary fGS/OSS  (179) ovary OSC  (176) ovary OSS  127 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    50 Schneider line 2 Sg4    16 embryonic 1182-4H    55 embryonic GM2    319 embryonic Kc167    176 embryonic S1    56 embryonic S3    27 leg disc CME L1    17 wing disc CME-W2    48 wing disc ML-DmD8    69 wing disc ML-DmD9    74 wing disc ML-DmD16-c3    80 wing disc ML-DmD21    53 wing disc ML-DmD32    90 haltere disc ML-DmD17-c3    93 eye-antennal disc ML-DmD11    79 antennal disc ML-DmD20-c5    37 mixed discs ML-DmD4-c1    70 CNS ML-DmBG1-c1    91 CNS ML-DmBG2-c2    87 tumorous blood cells mbn2    56 ovary fGS/OSS    179 ovary OSC    176 ovary OSS    127 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    73 cold shock, 4-day adult    51 heat shock, 4-day adult    53 Cadmium 50 mM 6 hrs, larvae L3    12 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult    101 Cadmium 100 mM 48 hrs, 4-day adult    292 Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult    467 Zinc 5 mM 12 hrs, larvae L3    21 Zinc 4.5 mM 48 hrs, 4-day adult    193 Ethanol 2.5% 3 hrs, larvae L3    100 Ethanol 5% 3 hrs, larvae L3    32 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    42 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    282 Caffeine 25 mg/ml 48 hrs, 4-day adult    134 Paraquat 5 mM 48 hrs, 4-day adult    153 Paraquat 10 mM 48 hrs, 4-day adult    75 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (73) cold shock, 4-day adult  (51) heat shock, 4-day adult  (53) Cadmium 50 mM 6 hrs, larvae L3    12 Cadmium 50 mM 12 hrs, larvae L3  (46) Cadmium 50 mM 48 hrs, 4-day adult  (101) Cadmium 100 mM 48 hrs, 4-day adult  (292) Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult  (467) Zinc 5 mM 12 hrs, larvae L3    21 Zinc 4.5 mM 48 hrs, 4-day adult  (193) Ethanol 2.5% 3 hrs, larvae L3  (100) Ethanol 5% 3 hrs, larvae L3  (32) Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3  (42) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (282) Caffeine 25 mg/ml 48 hrs, 4-day adult  (134) Paraquat 5 mM 48 hrs, 4-day adult  (153) Paraquat 10 mM 48 hrs, 4-day adult  (75) Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    73 cold shock, 4-day adult    51 heat shock, 4-day adult    53 Cadmium 50 mM 6 hrs, larvae L3    12 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult  101 Cadmium 100 mM 48 hrs, 4-day adult  (292) Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult  (467) Zinc 5 mM 12 hrs, larvae L3    21 Zinc 4.5 mM 48 hrs, 4-day adult  (193) Ethanol 2.5% 3 hrs, larvae L3    100 Ethanol 5% 3 hrs, larvae L3    32 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    42 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (282) Caffeine 25 mg/ml 48 hrs, 4-day adult  (134) Paraquat 5 mM 48 hrs, 4-day adult  (153) Paraquat 10 mM 48 hrs, 4-day adult    75 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    73 cold shock, 4-day adult    51 heat shock, 4-day adult    53 Cadmium 50 mM 6 hrs, larvae L3    12 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult    101 Cadmium 100 mM 48 hrs, 4-day adult    292 Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult    467 Zinc 5 mM 12 hrs, larvae L3    21 Zinc 4.5 mM 48 hrs, 4-day adult    193 Ethanol 2.5% 3 hrs, larvae L3    100 Ethanol 5% 3 hrs, larvae L3    32 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    42 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    282 Caffeine 25 mg/ml 48 hrs, 4-day adult    134 Paraquat 5 mM 48 hrs, 4-day adult    153 Paraquat 10 mM 48 hrs, 4-day adult    75 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    73 cold shock, 4-day adult    51 heat shock, 4-day adult    53 Cadmium 50 mM 6 hrs, larvae L3    12 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult    101 Cadmium 100 mM 48 hrs, 4-day adult    292 Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult    467 Zinc 5 mM 12 hrs, larvae L3    21 Zinc 4.5 mM 48 hrs, 4-day adult    193 Ethanol 2.5% 3 hrs, larvae L3    100 Ethanol 5% 3 hrs, larvae L3    32 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    42 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    282 Caffeine 25 mg/ml 48 hrs, 4-day adult    134 Paraquat 5 mM 48 hrs, 4-day adult    153 Paraquat 10 mM 48 hrs, 4-day adult    75 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult  (73) cold shock, 4-day adult  (51) heat shock, 4-day adult  (53) Cadmium 50 mM 6 hrs, larvae L3    12 Cadmium 50 mM 12 hrs, larvae L3  (46) Cadmium 50 mM 48 hrs, 4-day adult  (101) Cadmium 100 mM 48 hrs, 4-day adult  (292) Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult  (467) Zinc 5 mM 12 hrs, larvae L3    21 Zinc 4.5 mM 48 hrs, 4-day adult  (193) Ethanol 2.5% 3 hrs, larvae L3  (100) Ethanol 5% 3 hrs, larvae L3  32 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3  (42) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (282) Caffeine 25 mg/ml 48 hrs, 4-day adult  (134) Paraquat 5 mM 48 hrs, 4-day adult  (153) Paraquat 10 mM 48 hrs, 4-day adult  (75) Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    73 cold shock, 4-day adult    51 heat shock, 4-day adult    53 Cadmium 50 mM 6 hrs, larvae L3    12 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult  101 Cadmium 100 mM 48 hrs, 4-day adult  (292) Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult  (467) Zinc 5 mM 12 hrs, larvae L3    21 Zinc 4.5 mM 48 hrs, 4-day adult  (193) Ethanol 2.5% 3 hrs, larvae L3    100 Ethanol 5% 3 hrs, larvae L3    32 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    42 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (282) Caffeine 25 mg/ml 48 hrs, 4-day adult  134 Paraquat 5 mM 48 hrs, 4-day adult  (153) Paraquat 10 mM 48 hrs, 4-day adult    75 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    73 cold shock, 4-day adult    51 heat shock, 4-day adult    53 Cadmium 50 mM 6 hrs, larvae L3    12 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult    101 Cadmium 100 mM 48 hrs, 4-day adult    292 Copper 0.5 mM 12 hrs, larvae L3    13 Copper 15 mM 48 hrs, 4-day adult    467 Zinc 5 mM 12 hrs, larvae L3    21 Zinc 4.5 mM 48 hrs, 4-day adult    193 Ethanol 2.5% 3 hrs, larvae L3    100 Ethanol 5% 3 hrs, larvae L3    32 Ethanol 10% 3 hrs, larvae L3    15 Caffeine 1.5 mg/ml 4 hrs, larvae L3    42 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    282 Caffeine 25 mg/ml 48 hrs, 4-day adult    134 Paraquat 5 mM 48 hrs, 4-day adult    153 Paraquat 10 mM 48 hrs, 4-day adult    75 Rotenone 2 μg 12 hrs, larvae L3    20 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_27 mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0029996 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG2257-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | recessive Ubc-E2HPG165 viable, with Scer\GAL4pnr-MD237 Ubc-E2HGD9765 Other Phenotypes Allele body color defective, with Scer\GAL4pnr-MD237 Ubc-E2HGD9765 visible, with Scer\GAL4pnr-MD237 Ubc-E2HGD9765 Phenotype manifest in Allele chaeta | supernumerary, with Scer\GAL4pnr-MD237 Ubc-E2HGD9765 mesothoracic tergum, with Scer\GAL4pnr-MD237 Ubc-E2HGD9765
Classical Alleles ( 5 )
For All Classical Alleles Show
Allele of Ubc-E2H Class Mutagen Stocks Known lesion Ubc-E2Hd08756 P-element activity 1 -- Ubc-E2HEP1303 P-element activity 1 Yes Ubc-E2Hf07345 piggyBac transposase 1 -- Ubc-E2H5-HA-2368 0 -- Ubc-E2HPG165 Delta2-3 0 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Ubc-E2H Class Mutagen Stocks Known lesion Ubc-E2HGD9765 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes Ubc-E2HKK108626 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD9765} NA P{KK108626} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}Ubc-E2HEP1303 NA P{XP}Ubc-E2Hd08756 NA miscellaneous insertions P{RS5}Ubc-E2H5-HA-2368 NA PBac{WH}Ubc-E2Hf07345 NA insertion of enhancer trap binary system P{GawB}Ubc-E2HPG165 No
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
lateral inhibition inferred from mutant phenotype (Mummery-Widmer et al., 2009)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term Evidence References
ubiquitin-protein ligase activity inferred from sequence or structural similarity with NCBI_gi:4507783 (FlyBase, 1992-)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
Ubc-E2H - fs(1)K10 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Ubc-E2H allele Gene References unspecified Ppt1 (Buff et al., 2007)
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 58198 DroID - A comprehensive database of gene and protein interactions. • FBgn0029996 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 31728 SignaLink - A protein-protein and protein-miRNA interaction database with multi-layered structure and multiple confidence scores. • Q2XYF2
Orthologs
OrthoDB Orthologs (40) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6XD4BN Dipteran inclusive ortholog search EOG65B1QS Insect inclusive ortholog search EOG6VMDBV Arthropod inclusive ortholog search EOG6VHHPT Metazoa inclusive ortholog search EOG6RRKCF
Orthologs in Drosophila Species (EOG6XD4BN)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Ubc-E2H     Drosophila simulans   Dsim\GD16131 Y   Drosophila sechellia   Dsec\GM11213 Y   Drosophila erecta   Dere\GG17585 Y   Drosophila yakuba   Dyak\GE17485 Y   Drosophila ananassae   Dana\GF20984 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA15327 Y   Drosophila persimilis   Dper\GL26898 Y   Drosophila willistoni   Dwil\GK25273 Y   Drosophila virilis   Dvir\GJ15600 Y   Drosophila mojavensis   Dmoj\GI11001 Y   Drosophila grimshawi   Dgri\GH24347 Y
Orthologs in non-Drosophila Dipterans (EOG65B1QS)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL017518   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL013633   Anopheles gambiae Malaria mosquito  Agam\AGAP001068   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ015105
Orthologs in non-Dipteran Insects (EOG6VMDBV)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\Ubc-E2H   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG009386   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH24787   Atta cephalotes Leafcutter ant  Acep\ACEP20533   Camponotus floridanus Florida carpenter ant  Cflo\CFLO21717   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL21325   Linepithema humile Argentine ant  Lhum\LH16469   Pogonomyrmex barbatus Red harvester ant  Pbar\PB17335   Solenopsis invicta Red fire ant  Sinv\SINV26028   Acyrthosiphon pisum Pea aphid  Apim\ACYPI009659   Bombyx mori Silkmoth  Bmor\BGIBMGA013365   Pediculus humanus Human body louse  Phum\PHUM601260   Tribolium castaneum Red flour beetle  Tcas\TC005175
Orthologs in non-Insect Arthropods (EOG6VHHPT)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_302154   Ixodes scapularis Deer tick  Isca\ISCW018315
Orthologs in non-Arthropod Metazoa (EOG6RRKCF)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\ubc-8   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_014145gn   Danio rerio Zebrafish  Drer\ube2h   Xenopus tropicalis Western clawed frog  Xtro\ube2h   Gallus gallus Domestic chicken  Ggal\UBE2H   Mus musculus House mouse  Mmus\Ube2h   Mus musculus House mouse  Mmus\Gm2058   Rattus norvegicus Norway rat  Rnor\LOC100361890   Homo sapiens Human  Hsap\UBE2H
Human Orthologs (1)
Gene OMIM HGNC Hsap\UBE2H
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD16131 Drosophila sechellia Dsec\GM11213 Drosophila erecta Dere\GG17585 Drosophila yakuba Dyak\GE17485 Drosophila ananassae Dana\GF20984 Drosophila pseudoobscura pseudoobscura Dpse\GA15327 Drosophila persimilis Dper\GL26898 Drosophila willistoni Dwil\GK25273 Drosophila virilis Dvir\GJ15600 Drosophila mojavensis Dmoj\GI11001 Drosophila grimshawi Dgri\GH24347
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	17216 w1118 P{EP}Ubc-E2HEP1303
Harvard	- P{XP}Ubc-E2Hd08756 - PBac{WH}Ubc-E2Hf07345
VDRC	v108386 P{KK108626}VIE-260B v33509 w1118; P{GD9765}v33509 v33510 w1118; P{GD9765}v33510
Genomic Clones ( 1 )
	BACR24A02 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 180 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD13772 LD17992
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH01719 LD01181 LD02890 LD03428 LD03474 LD04557 LD05607 LD05968 LD06921 LD07290 LD09878 LD10061 LD10294 LD10409 LD15074 LD16226 LD17011 LD17212 LD17279 LD19902 LD19941 LD41569 LP06362 RE04252 RE07160 RE07542 RE08752 RE09556 RE09676 RE12922 RE15412 RE17879 RE18531 RE19523 RE20688 RE23026 RE23080 RE23096 RE23972 RE27265 RE27506 RE27901 RE27950 RE28048 RE29273 RE31928 RE35670 RE47741 RE47996 RE48258 RE48463 RE48709 RE49428 RE49585 RE50368 RE50609 RE51328 RE52240 RE53653 RE55305 RE55313 RE55892 RE56452 RE56569 RE56570 RE56853 RE58165 RE60104 RE61223 RE61318 RE62378 RE62978 RE63638 RE63695 RE64852 RE66479 RE67811 RE67837 RE67908 RE69175 RE69722 RE70227 RE71257 RE72231 RE73317 RE73428 RE73647 RH30147 RH38906 RH54046 RH55196 RH74110 RH74389
Other clones	9139 9365 11289 11400 13388 13531 14544 17261 17293 17989 29806 31127 33192 39467 55807 63879 73051 81459 98980 98989 101748 102091 106999 117912 119707 147181 163715 165740 166035 176431 179560 192109 194749 214511.16 CK01.39D.D10 CK01.62D.G3 CK01.63C.G7 CK01.94D.A10 CK01.96D.H7 CK01.103C.D8 CK01.106B.C5 CK01.123A.A2 CK01.131C.D11 CK01.144A.B8 Dmel_dig_009575_0589_1861 Dmel_dig_011557_0649_0960 Dmel_dig_012421_0633_1054 Dmel_neb_007345_0593_3432 Dmel_neb_015510_0840_2869 EC32613 EK039157 EK050626 EK073735 EK075132 EK086948 EK088711 EK093733 EK102514 EK108046 EK108111 EK108646 EK111524 EK111654 EK115329 EK117317 EK118640 EK124342 EK129710 EK129741 EK140430 EK156338 EK176531 EK184225 EK190811 EK207314 EK227935 EK228726 EK237152 EK268337 EK281542 EK284418 EK294929 EP22138 ESG0116c.B21_H03 UUGC1123
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0029996 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 31728
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Ubc-E2H CG2257 (Fernandez-Funez et al., 2000)
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_132210 NM_167145 NM_167146 RefSeq (Proteins) • NP_572438 NP_727233 NP_727234 DDBJ / EMBL / GenBank • AA539697 AA735305 AAF46318 AAF46319 AAL28785 AAM49879 AAN09227 ABA86316 AQ073175 AW942285 AW942464 AY061237 AY118510 CZ476395 CZ490155 DQ138710 Entrez Gene - A searchable database of RefSeq genes. • 31728 UniProtKB/TrEMBL • Q2XYF2 Q7JW03
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Ubiquitin-conjugating enzyme, E2 (IPR000608) Ubiquitin-conjugating enzyme/RWD-like (IPR016135) Ubiquitin-conjugating enzyme, active site (IPR023313)
Linkouts
	BioGRID - A database of protein and genetic interactions • 58198 DroID - A comprehensive database of gene and protein interactions. • FBgn0029996 DRSC - Results from RNAi screens. • FBgn0029996 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0029996 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG2257-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0029996 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 31728 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 31728 modMine - Data generated by the modENCODE project. • FBgn0029996 SignaLink - A protein-protein and protein-miRNA interaction database with multi-layered structure and multiple confidence scores. • Q2XYF2
Synonyms & Secondary IDs ( 5 )
Reported As
Symbol Synonym	CG2257 (Bourbon et al., 2002, Keleman et al., 2009.8.5) dUbc-E2H (Shulman and Feany, 2003, Zoghbi and Botas, 2002, Fernandez-Funez et al., 2000) Ubc-E2H (Branco et al., 2008, Seong et al., 2011, Franco et al., 2011) UbcE2H (Buff et al., 2007) Ubc-E2Hs (Michelle et al., 2009)
Name Synonym	Ubc-E2H
Secondary FlyBase IDs
References ( 32 )
Generate a list of	All references relating to this gene ( 32 )
List References by type	Research paper  ( 11 ) Supplementary material  ( 4 ) Review  ( 2 ) Personal communication to FlyBase  ( 7 ) FlyBase analysis  ( 2 ) Curated genome annotation  ( 2 ) DNA/RNA sequence record  ( 3 )
Recent research papers ( 3 )
	Palgi et al., 2012, BMC Genomics 13: 134 Gene expression analysis of Drosophilaa Manf mutants reveals perturbations in membrane traffic and major metabolic changes. [FBrf0218515] Franco et al., 2011, Mol. Cell. Proteomics 10(5): M110.002188 A Novel Strategy to Isolate Ubiquitin Conjugates Reveals Wide Role for Ubiquitination during Neural Development. [FBrf0213919] Seong et al., 2011, Biogerontology 12(2): 93--107 Genome-wide analysis of low-dose irradiated male Drosophila melanogaster with extended longevity. [FBrf0213307] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2011 Show reviews ...