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Gene Dmel\CG10555

General Information
Symbol	Dmel\CG10555	Species	D. melanogaster
Name		Annotation symbol	CG10555
Feature type	protein_coding_gene	FlyBase ID	FBgn0030034
Gene Model Status	Current	Stock availability	5 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	7E6-7E6	Sequence location	X:8,292,973..8,297,975 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG10555 (FBgn0030034). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. The phenotype of these alleles is annotated with: mesothoracic tergum. It has one annotated transcript and one annotated polypeptide. Protein features are: SSXT. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult salivary gland, larval trachea, adult ovary, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1638135_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG10555. Gene sequence location is X:8292973..8297975.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN31183 HFA17748
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 7E6-7E6   Limits computationally determined from genome sequence between P{EP}CG1632EP1583 and P{EP}MoeEP1652
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG10555 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	DGC clone LD19066 appears problematic: incomplete CDS
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG10555-RA FBtr0071174  NM_132246   4614   926
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG10555-PA   FBpp0071122   93.0   926   8.65     NP_572474   AAF46366
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • SSXT (IPR007726)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA391869   AA539812   AA541011   AA950145   AA950456   AA978995   AA979006   AA979035   AA990782   AE014298 AAF46366   AI514245   AW942515   AY061258 AAL28806   BG638588   BG638698   BG638700   BI166290   BI230733   BI234227   BI237029   BI357062   BI485522   BI485531   BI566890   BI641498   BT016106 AAV36991   CO178048   CO178056   CO178064   CO266921   CO269767   CO271370   CO273558   CO280116   CO280125   CO283456   CO283491   CO318468   CO319381   CO319650   EC057091   EC058275   EC069736   EC073493   EC078281   EC084725   EC204355   EC207205   EC209385   EC210477   EC220312   EC222439   EC243220   EC243457   EC245158   EC250348   EC254979   EV593861   FE863092   GH769414
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q5U0Y6 Q95RN5 Q9W3G1
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0030034    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0030034 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0030034 expression level Developmental Stage   Expression Level embryo 00-02hr    3746 embryo 02-04hr    5752 embryo 04-06hr    3002 embryo 06-08hr    2614 embryo 08-10hr    2167 embryo 10-12hr    1634 embryo 12-14hr    1459 embryo 14-16hr    1613 embryo 16-18hr    1103 embryo 18-20hr    614 embryo 20-22hr    1369 embryo 22-24hr    1028 larva L1    587 larva L2    504 larva L3 12hr old    488 larva L3 puffstage 1-2    451 larva L3 puffstage 3-6    1021 larva L3 puffstage 7-9    1131 white prepupae new    1264 white prepupae 12hr    1450 white prepupae 24hr    1986 pupae 2d postWPP    939 pupae 3d postWPP    304 pupae 4d postWPP    270 adult male 01day    284 adult male 05day    351 adult male 30day    383 adult female 01day    1379 adult female 05day    2091 adult female 30day    2208 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (3746) embryo 02-04hr  (5752) embryo 04-06hr  (3002) embryo 06-08hr  (2614) embryo 08-10hr  (2167) embryo 10-12hr  (1634) embryo 12-14hr  (1459) embryo 14-16hr  (1613) embryo 16-18hr  (1103) embryo 18-20hr  (614) embryo 20-22hr  (1369) embryo 22-24hr  (1028) larva L1  (587) larva L2  (504) larva L3 12hr old  (488) larva L3 puffstage 1-2  (451) larva L3 puffstage 3-6  (1021) larva L3 puffstage 7-9  (1131) white prepupae new  (1264) white prepupae 12hr  (1450) white prepupae 24hr  (1986) pupae 2d postWPP  (939) pupae 3d postWPP  (304) pupae 4d postWPP  (270) adult male 01day  (284) adult male 05day  (351) adult male 30day  (383) adult female 01day  (1379) adult female 05day  (2091) adult female 30day  (2208) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (3746) embryo 02-04hr  (5752) embryo 04-06hr  (3002) embryo 06-08hr  (2614) embryo 08-10hr  (2167) embryo 10-12hr  (1634) embryo 12-14hr  1459 embryo 14-16hr  (1613) embryo 16-18hr    1103 embryo 18-20hr    614 embryo 20-22hr    1369 embryo 22-24hr    1028 larva L1    587 larva L2    504 larva L3 12hr old    488 larva L3 puffstage 1-2    451 larva L3 puffstage 3-6    1021 larva L3 puffstage 7-9    1131 white prepupae new    1264 white prepupae 12hr  1450 white prepupae 24hr  (1986) pupae 2d postWPP    939 pupae 3d postWPP    304 pupae 4d postWPP    270 adult male 01day    284 adult male 05day    351 adult male 30day    383 adult female 01day    1379 adult female 05day  (2091) adult female 30day  (2208) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    3746 embryo 02-04hr    5752 embryo 04-06hr    3002 embryo 06-08hr    2614 embryo 08-10hr    2167 embryo 10-12hr    1634 embryo 12-14hr    1459 embryo 14-16hr    1613 embryo 16-18hr    1103 embryo 18-20hr    614 embryo 20-22hr    1369 embryo 22-24hr    1028 larva L1    587 larva L2    504 larva L3 12hr old    488 larva L3 puffstage 1-2    451 larva L3 puffstage 3-6    1021 larva L3 puffstage 7-9    1131 white prepupae new    1264 white prepupae 12hr    1450 white prepupae 24hr    1986 pupae 2d postWPP    939 pupae 3d postWPP    304 pupae 4d postWPP    270 adult male 01day    284 adult male 05day    351 adult male 30day    383 adult female 01day    1379 adult female 05day    2091 adult female 30day    2208 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    3746 embryo 02-04hr    5752 embryo 04-06hr    3002 embryo 06-08hr    2614 embryo 08-10hr    2167 embryo 10-12hr    1634 embryo 12-14hr    1459 embryo 14-16hr    1613 embryo 16-18hr    1103 embryo 18-20hr    614 embryo 20-22hr    1369 embryo 22-24hr    1028 larva L1    587 larva L2    504 larva L3 12hr old    488 larva L3 puffstage 1-2    451 larva L3 puffstage 3-6    1021 larva L3 puffstage 7-9    1131 white prepupae new    1264 white prepupae 12hr    1450 white prepupae 24hr    1986 pupae 2d postWPP    939 pupae 3d postWPP    304 pupae 4d postWPP    270 adult male 01day    284 adult male 05day    351 adult male 30day    383 adult female 01day    1379 adult female 05day    2091 adult female 30day    2208 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0030034 expression level Developmental Stage   Expression Level embryo 00-02hr    3746 embryo 02-04hr    5752 embryo 04-06hr    3002 embryo 06-08hr    2614 embryo 08-10hr    2167 embryo 10-12hr    1634 embryo 12-14hr    1459 embryo 14-16hr    1613 embryo 16-18hr    1103 embryo 18-20hr    614 embryo 20-22hr    1369 embryo 22-24hr    1028 larva L1    587 larva L2    504 larva L3 12hr old    488 larva L3 puffstage 1-2    451 larva L3 puffstage 3-6    1021 larva L3 puffstage 7-9    1131 white prepupae new    1264 white prepupae 12hr    1450 white prepupae 24hr    1986 pupae 2d postWPP    939 pupae 3d postWPP    304 pupae 4d postWPP    270 adult male 01day    284 adult male 05day    351 adult male 30day    383 adult female 01day    1379 adult female 05day    2091 adult female 30day    2208 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (3746) embryo 02-04hr  (5752) embryo 04-06hr  (3002) embryo 06-08hr  (2614) embryo 08-10hr  (2167) embryo 10-12hr  (1634) embryo 12-14hr  (1459) embryo 14-16hr  (1613) embryo 16-18hr  (1103) embryo 18-20hr  (614) embryo 20-22hr  (1369) embryo 22-24hr  (1028) larva L1  (587) larva L2  (504) larva L3 12hr old  (488) larva L3 puffstage 1-2  (451) larva L3 puffstage 3-6  (1021) larva L3 puffstage 7-9  (1131) white prepupae new  (1264) white prepupae 12hr  (1450) white prepupae 24hr  (1986) pupae 2d postWPP  (939) pupae 3d postWPP  (304) pupae 4d postWPP  (270) adult male 01day  (284) adult male 05day  (351) adult male 30day  (383) adult female 01day  (1379) adult female 05day  (2091) adult female 30day  (2208) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (3746) embryo 02-04hr  (5752) embryo 04-06hr  (3002) embryo 06-08hr  (2614) embryo 08-10hr  2167 embryo 10-12hr  1634 embryo 12-14hr  1459 embryo 14-16hr  1613 embryo 16-18hr    1103 embryo 18-20hr    614 embryo 20-22hr    1369 embryo 22-24hr    1028 larva L1    587 larva L2    504 larva L3 12hr old    488 larva L3 puffstage 1-2    451 larva L3 puffstage 3-6    1021 larva L3 puffstage 7-9    1131 white prepupae new    1264 white prepupae 12hr  1450 white prepupae 24hr  1986 pupae 2d postWPP    939 pupae 3d postWPP    304 pupae 4d postWPP    270 adult male 01day    284 adult male 05day    351 adult male 30day    383 adult female 01day    1379 adult female 05day  2091 adult female 30day  2208 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    3746 embryo 02-04hr    5752 embryo 04-06hr    3002 embryo 06-08hr    2614 embryo 08-10hr    2167 embryo 10-12hr    1634 embryo 12-14hr    1459 embryo 14-16hr    1613 embryo 16-18hr    1103 embryo 18-20hr    614 embryo 20-22hr    1369 embryo 22-24hr    1028 larva L1    587 larva L2    504 larva L3 12hr old    488 larva L3 puffstage 1-2    451 larva L3 puffstage 3-6    1021 larva L3 puffstage 7-9    1131 white prepupae new    1264 white prepupae 12hr    1450 white prepupae 24hr    1986 pupae 2d postWPP    939 pupae 3d postWPP    304 pupae 4d postWPP    270 adult male 01day    284 adult male 05day    351 adult male 30day    383 adult female 01day    1379 adult female 05day    2091 adult female 30day    2208 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    3746 embryo 02-04hr    5752 embryo 04-06hr    3002 embryo 06-08hr    2614 embryo 08-10hr    2167 embryo 10-12hr    1634 embryo 12-14hr    1459 embryo 14-16hr    1613 embryo 16-18hr    1103 embryo 18-20hr    614 embryo 20-22hr    1369 embryo 22-24hr    1028 larva L1    587 larva L2    504 larva L3 12hr old    488 larva L3 puffstage 1-2    451 larva L3 puffstage 3-6    1021 larva L3 puffstage 7-9    1131 white prepupae new    1264 white prepupae 12hr    1450 white prepupae 24hr    1986 pupae 2d postWPP    939 pupae 3d postWPP    304 pupae 4d postWPP    270 adult male 01day    284 adult male 05day    351 adult male 30day    383 adult female 01day    1379 adult female 05day    2091 adult female 30day    2208 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0030034    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0030034 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, adult salivary gland, larval trachea, adult ovary, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0030034 expression level Tissue   Expression Level Larval Central Nervous System    407.5 Larval Midgut    40.8 Larval Hindgut    94.7 Larval Malpighian Tubules    95.2 Larval Fat Body    65.5 Larval Salivary Gland    98.7 Larval Trachea    179.2 Larval Carcass    113.375 Adult Head    51 Adult Eye    68.8 Adult Brain    112 Adult Thoracic-Abdominal Ganglion    93.5 Adult Crop    81.9 Adult Midgut    59.3 Adult Hindgut    79.2 Adult Malpighian Tubules    68.7 Adult Fat Body    71.2 Adult Salivary Gland    101.4 Adult Heart    60.7 Adult VirginFemale Spermatheca    54.2 Adult InseminatedFemale Spermatheca    52.5 Adult Ovary    308.7 Adult Testis    13.5 Adult Male Accessory Gland    76.2 Adult Carcass    46.7 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    407.5 Larval Midgut    40.8 Larval Hindgut    94.7 Larval Malpighian Tubules    95.2 Larval Fat Body    65.5 Larval Salivary Gland    98.7 Larval Trachea    179.2 Larval Carcass    113.375 Adult Head    51 Adult Eye    68.8 Adult Brain    112 Adult Thoracic-Abdominal Ganglion    93.5 Adult Crop    81.9 Adult Midgut    59.3 Adult Hindgut    79.2 Adult Malpighian Tubules    68.7 Adult Fat Body    71.2 Adult Salivary Gland    101.4 Adult Heart    60.7 Adult VirginFemale Spermatheca    54.2 Adult InseminatedFemale Spermatheca    52.5 Adult Ovary    308.7 Adult Testis    13.5 Adult Male Accessory Gland    76.2 Adult Carcass    46.7 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    407.5 Larval Midgut    40.8 Larval Hindgut    94.7 Larval Malpighian Tubules    95.2 Larval Fat Body    65.5 Larval Salivary Gland    98.7 Larval Trachea    179.2 Larval Carcass    113.375 Adult Head    51 Adult Eye    68.8 Adult Brain    112 Adult Thoracic-Abdominal Ganglion    93.5 Adult Crop    81.9 Adult Midgut    59.3 Adult Hindgut    79.2 Adult Malpighian Tubules    68.7 Adult Fat Body    71.2 Adult Salivary Gland    101.4 Adult Heart    60.7 Adult VirginFemale Spermatheca    54.2 Adult InseminatedFemale Spermatheca    52.5 Adult Ovary    308.7 Adult Testis    13.5 Adult Male Accessory Gland    76.2 Adult Carcass    46.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    407.5 Larval Midgut    40.8 Larval Hindgut    94.7 Larval Malpighian Tubules    95.2 Larval Fat Body    65.5 Larval Salivary Gland    98.7 Larval Trachea    179.2 Larval Carcass    113.375 Adult Head    51 Adult Eye    68.8 Adult Brain    112 Adult Thoracic-Abdominal Ganglion    93.5 Adult Crop    81.9 Adult Midgut    59.3 Adult Hindgut    79.2 Adult Malpighian Tubules    68.7 Adult Fat Body    71.2 Adult Salivary Gland    101.4 Adult Heart    60.7 Adult VirginFemale Spermatheca    54.2 Adult InseminatedFemale Spermatheca    52.5 Adult Ovary    308.7 Adult Testis    13.5 Adult Male Accessory Gland    76.2 Adult Carcass    46.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0030034 expression level Tissue   Expression Level Larval Central Nervous System    407.5 Larval Midgut    40.8 Larval Hindgut    94.7 Larval Malpighian Tubules    95.2 Larval Fat Body    65.5 Larval Salivary Gland    98.7 Larval Trachea    179.2 Larval Carcass    113.375 Adult Head    51 Adult Eye    68.8 Adult Brain    112 Adult Thoracic-Abdominal Ganglion    93.5 Adult Crop    81.9 Adult Midgut    59.3 Adult Hindgut    79.2 Adult Malpighian Tubules    68.7 Adult Fat Body    71.2 Adult Salivary Gland    101.4 Adult Heart    60.7 Adult VirginFemale Spermatheca    54.2 Adult InseminatedFemale Spermatheca    52.5 Adult Ovary    308.7 Adult Testis    13.5 Adult Male Accessory Gland    76.2 Adult Carcass    46.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    407.5 Larval Midgut    40.8 Larval Hindgut    94.7 Larval Malpighian Tubules    95.2 Larval Fat Body    65.5 Larval Salivary Gland    98.7 Larval Trachea    179.2 Larval Carcass    113.375 Adult Head    51 Adult Eye    68.8 Adult Brain    112 Adult Thoracic-Abdominal Ganglion    93.5 Adult Crop    81.9 Adult Midgut    59.3 Adult Hindgut    79.2 Adult Malpighian Tubules    68.7 Adult Fat Body    71.2 Adult Salivary Gland    101.4 Adult Heart    60.7 Adult VirginFemale Spermatheca    54.2 Adult InseminatedFemale Spermatheca    52.5 Adult Ovary    308.7 Adult Testis    13.5 Adult Male Accessory Gland    76.2 Adult Carcass    46.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    407.5 Larval Midgut    40.8 Larval Hindgut    94.7 Larval Malpighian Tubules    95.2 Larval Fat Body    65.5 Larval Salivary Gland    98.7 Larval Trachea    179.2 Larval Carcass    113.375 Adult Head    51 Adult Eye    68.8 Adult Brain    112 Adult Thoracic-Abdominal Ganglion    93.5 Adult Crop    81.9 Adult Midgut    59.3 Adult Hindgut    79.2 Adult Malpighian Tubules    68.7 Adult Fat Body    71.2 Adult Salivary Gland    101.4 Adult Heart    60.7 Adult VirginFemale Spermatheca    54.2 Adult InseminatedFemale Spermatheca    52.5 Adult Ovary    308.7 Adult Testis    13.5 Adult Male Accessory Gland    76.2 Adult Carcass    46.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    407.5 Larval Midgut    40.8 Larval Hindgut    94.7 Larval Malpighian Tubules    95.2 Larval Fat Body    65.5 Larval Salivary Gland    98.7 Larval Trachea    179.2 Larval Carcass    113.375 Adult Head    51 Adult Eye    68.8 Adult Brain    112 Adult Thoracic-Abdominal Ganglion    93.5 Adult Crop    81.9 Adult Midgut    59.3 Adult Hindgut    79.2 Adult Malpighian Tubules    68.7 Adult Fat Body    71.2 Adult Salivary Gland    101.4 Adult Heart    60.7 Adult VirginFemale Spermatheca    54.2 Adult InseminatedFemale Spermatheca    52.5 Adult Ovary    308.7 Adult Testis    13.5 Adult Male Accessory Gland    76.2 Adult Carcass    46.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    51   NA  Eye    68.8   NA  Brain    112   407.5  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    93.5   NA  Crop    81.9   40.8  Midgut    59.3   94.7  Hindgut    79.2   95.2  Malpighian Tubules    68.7   65.5  Fat Body    71.2   98.7  Salivary Gland    101.4   NA  Heart    60.7   179.2  Trachea    NA   NA  VirginFemale Spermatheca    54.2   NA  InseminatedFemale Spermatheca    52.5   NA  Ovary    308.7   NA  Testis    13.5   NA  Male Accessory Gland    76.2   113.375  Carcass    46.7 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_17
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030034 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10555-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele semi-lethal | pupal stage, with Scer\GAL4pnr-MD237 CG10555GD16211 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 CG10555GD16211 Phenotype manifest in Allele mesothoracic tergum, with Scer\GAL4pnr-MD237 CG10555GD16211
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG10555 Class Mutagen Stocks Known lesion CG10555e04596 piggyBac transposase 2 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG10555 Class Mutagen Stocks Known lesion CG10555GD16211 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG10555KK111183 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Duplicated in	Dp(1;3)DC190 (Popodi et al., 2010-) Dp(1;3)DC191 (Popodi et al., 2010-)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD16211} NA P{KK111183} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{RB}CG10555e04596 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG10555 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0030034 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 31771
Orthologs
Genome-wide drosophilid orthologs	Dana\GF21726 Dere\GG19316 Dgri\GH11848 Dmoj\GI14330 Dpse\GA22563 Dsec\GM21540 Dsim\GD20100 Dvir\GJ19384 Dwil\GK16293 Dyak\GE15779
Curated drosophilid orthologs	Dpse\GA10391   Dsim\CG10555 (Montchamp-Moreau et al., 2006)
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • XP_624990.2 Apis mellifera (honey bee) CBP29096 Caenorhabditis briggsae (nematode) ENSCAFP00000026806 Canis familiaris (dog) CPIJ017455 Culex pipens (mosquito) DDB0220507 Dictyostelium discoideum (amoeba) PHUM007013-PA Pediculus humanus (human body louse) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13490 LH26030 FBgn0233344 FBgn0218295 FBgn0206527 FBgn0191580 JGI_V11_318296 FBgn0243966 FBgn0154014 FBgn0137083 FBgn0053179 FBgn0119327 FBgn0111520 FBgn0098726 CPIJ017455 BGIBMGA003006 ACYPI007108 GB10168 AGAP013441 AGAP002485 AAEL014701 PHUM137510 GLEAN_04108
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
Bloomington	18277 w1118; PBac{RB}CG10555e04596/FM7c
Harvard	- PBac{RB}CG10555e04596
VDRC	v105802 P{KK111183}VIE-260B v50115 w1118; P{GD16211}v50115 v50116 w1118; P{GD16211}v50116
Genomic Clones ( 1 )
	BACR04P05 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 55 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD19066 LD20133
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH27333 LD10905 LD20769 LD30062 LD33228 LD33241 LD33251 LD33281 LD34656 RE06365 RE14762 RE29893 RE33173 RE43410 RE68868 RE68878 RH36667 SD24849
Other clones	11470 36970 39387 39459 43922 44303 167116 167453.2 175222.1 214573.15 CK01.18D.H4 CK01.68D.D12 CK01.68D.G11 CK01.68D.H12 CK01.129C.C12 CK01.144B.H5 CK01.168B.C5 Dmel_neb_011512_0601_3100 EK055121 EK055136 EK055148 EK095844 EK103211 EK111433 EK147939 EK152639 EK152656 EK163324 EK163416 EK272248 EK277843 EK279830 LD30257 RM07189 RP001031135
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0030034 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 31771
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_132246 RefSeq (Proteins) • NP_572474 DDBJ / EMBL / GenBank • AA539812 AAF46366 AAL28806 AAV36991 AW942515 AY061258 BT016106 Entrez Gene - A searchable database of RefSeq genes. • 31771 UniProtKB/TrEMBL • Q5U0Y6 Q9W3G1 Q95RN5
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • SSXT (IPR007726)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0030034 DRSC - Results from RNAi screens. • FBgn0030034 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030034 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10555-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0030034 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 31771 InParanoid A subset of ortholog calls from InParanoid. • XP_624990.2 Apis mellifera (honey bee) CBP29096 Caenorhabditis briggsae (nematode) ENSCAFP00000026806 Canis familiaris (dog) CPIJ017455 Culex pipens (mosquito) DDB0220507 Dictyostelium discoideum (amoeba) PHUM007013-PA Pediculus humanus (human body louse) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 31771 modMine - Data generated by the modENCODE project. • FBgn0030034 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13490 LH26030 FBgn0233344 FBgn0218295 FBgn0206527 FBgn0191580 JGI_V11_318296 FBgn0243966 FBgn0154014 FBgn0137083 FBgn0053179 FBgn0119327 FBgn0111520 FBgn0098726 CPIJ017455 BGIBMGA003006 ACYPI007108 GB10168 AGAP013441 AGAP002485 AAEL014701 PHUM137510 GLEAN_04108
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG10555 (Derome et al., 2008, Keleman et al., 2009.8.5, Popodi et al., 2010-)
Name Synonym
Secondary FlyBase IDs
References ( 10 )
Research paper	Derome et al., 2008, Mol. Biol. Evol. 25(2): 409--416 Selective sweeps in a 2-locus model for sex-ratio meiotic drive in Drosophila simulans. [FBrf0204227] Montchamp-Moreau et al., 2006, Genetics 174(3): 1365--1371 Organization of the sex-ratio meiotic drive region in Drosophila simulans. [FBrf0192398]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Popodi et al., 2010-, Small X duplications for the stock center collection. Small X duplications for the stock center collection. [FBrf0210621] Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase. Exelixis insertion alleles that are not in FlyBase. [FBrf0179797]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]