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Gene Dmel\CG7065

General Information
Symbol	Dmel\CG7065	Species	D. melanogaster
Name		Annotation symbol	CG7065
Feature type	protein_coding_gene	FlyBase ID	FBgn0030091
Gene Model Status	Current	Stock availability	4 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	8C13-8C14	Sequence location	X:9,036,585..9,041,763 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG7065 (FBgn0030091). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system. Comments on Affy2 ProbeSet: ProbeSet 1639672_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG7065. Gene sequence location is X:9036585..9041763.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	References Dekanty et al., 2010, PLoS Genet. 6(6): e1000994 Sequence features HFA18420 BKN24944
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 8C13-8C14   Limits computationally determined from genome sequence between P{EP}EP1450&P{EP}EP1356 and P{EP}EP912EP912
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG7065 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	DGC clone appears problematic: incomplete CDS
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG7065-RA FBtr0071299  NM_132301   4044   1231
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG7065-PA   FBpp0071234   136.8   1231   9.72     NP_572529   AAF46448
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014298 AAF46448   AI455802   AW943291   AY069601 AAL39746   BI363666   BI363758   BI372903   BI639610   BP547897   BP548708   BP548709   BT023505   CO185434   CO264410   CO273304   CO273316   CO289384   CO326632   CO333246   CO344076   EC058783   EC065537   EC083368   EC194480   EC198463   EC199961   EC206372   EC218120   EC225506   EC232457   EC252533
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q7YZA2
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0030091    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0030091 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-12 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0030091 expression level Developmental Stage   Expression Level embryo 00-02hr    1201 embryo 02-04hr    2259 embryo 04-06hr    2078 embryo 06-08hr    1863 embryo 08-10hr    1598 embryo 10-12hr    1142 embryo 12-14hr    886 embryo 14-16hr    1076 embryo 16-18hr    680 embryo 18-20hr    419 embryo 20-22hr    735 embryo 22-24hr    679 larva L1    548 larva L2    443 larva L3 12hr old    406 larva L3 puffstage 1-2    359 larva L3 puffstage 3-6    661 larva L3 puffstage 7-9    760 white prepupae new    709 white prepupae 12hr    860 white prepupae 24hr    1188 pupae 2d postWPP    676 pupae 3d postWPP    369 pupae 4d postWPP    354 adult male 01day    462 adult male 05day    593 adult male 30day    570 adult female 01day    693 adult female 05day    918 adult female 30day    875 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1201) embryo 02-04hr  (2259) embryo 04-06hr  (2078) embryo 06-08hr  (1863) embryo 08-10hr  (1598) embryo 10-12hr  (1142) embryo 12-14hr  (886) embryo 14-16hr  (1076) embryo 16-18hr  (680) embryo 18-20hr  (419) embryo 20-22hr  (735) embryo 22-24hr  (679) larva L1  (548) larva L2  (443) larva L3 12hr old  (406) larva L3 puffstage 1-2  (359) larva L3 puffstage 3-6  (661) larva L3 puffstage 7-9  (760) white prepupae new  (709) white prepupae 12hr  (860) white prepupae 24hr  (1188) pupae 2d postWPP  (676) pupae 3d postWPP  (369) pupae 4d postWPP  (354) adult male 01day  (462) adult male 05day  (593) adult male 30day  (570) adult female 01day  (693) adult female 05day  (918) adult female 30day  (875) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1201 embryo 02-04hr  (2259) embryo 04-06hr  (2078) embryo 06-08hr  (1863) embryo 08-10hr  (1598) embryo 10-12hr    1142 embryo 12-14hr    886 embryo 14-16hr    1076 embryo 16-18hr    680 embryo 18-20hr    419 embryo 20-22hr    735 embryo 22-24hr    679 larva L1    548 larva L2    443 larva L3 12hr old    406 larva L3 puffstage 1-2    359 larva L3 puffstage 3-6    661 larva L3 puffstage 7-9    760 white prepupae new    709 white prepupae 12hr    860 white prepupae 24hr    1188 pupae 2d postWPP    676 pupae 3d postWPP    369 pupae 4d postWPP    354 adult male 01day    462 adult male 05day    593 adult male 30day    570 adult female 01day    693 adult female 05day    918 adult female 30day    875 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1201 embryo 02-04hr    2259 embryo 04-06hr    2078 embryo 06-08hr    1863 embryo 08-10hr    1598 embryo 10-12hr    1142 embryo 12-14hr    886 embryo 14-16hr    1076 embryo 16-18hr    680 embryo 18-20hr    419 embryo 20-22hr    735 embryo 22-24hr    679 larva L1    548 larva L2    443 larva L3 12hr old    406 larva L3 puffstage 1-2    359 larva L3 puffstage 3-6    661 larva L3 puffstage 7-9    760 white prepupae new    709 white prepupae 12hr    860 white prepupae 24hr    1188 pupae 2d postWPP    676 pupae 3d postWPP    369 pupae 4d postWPP    354 adult male 01day    462 adult male 05day    593 adult male 30day    570 adult female 01day    693 adult female 05day    918 adult female 30day    875 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1201 embryo 02-04hr    2259 embryo 04-06hr    2078 embryo 06-08hr    1863 embryo 08-10hr    1598 embryo 10-12hr    1142 embryo 12-14hr    886 embryo 14-16hr    1076 embryo 16-18hr    680 embryo 18-20hr    419 embryo 20-22hr    735 embryo 22-24hr    679 larva L1    548 larva L2    443 larva L3 12hr old    406 larva L3 puffstage 1-2    359 larva L3 puffstage 3-6    661 larva L3 puffstage 7-9    760 white prepupae new    709 white prepupae 12hr    860 white prepupae 24hr    1188 pupae 2d postWPP    676 pupae 3d postWPP    369 pupae 4d postWPP    354 adult male 01day    462 adult male 05day    593 adult male 30day    570 adult female 01day    693 adult female 05day    918 adult female 30day    875 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0030091 expression level Developmental Stage   Expression Level embryo 00-02hr    1201 embryo 02-04hr    2259 embryo 04-06hr    2078 embryo 06-08hr    1863 embryo 08-10hr    1598 embryo 10-12hr    1142 embryo 12-14hr    886 embryo 14-16hr    1076 embryo 16-18hr    680 embryo 18-20hr    419 embryo 20-22hr    735 embryo 22-24hr    679 larva L1    548 larva L2    443 larva L3 12hr old    406 larva L3 puffstage 1-2    359 larva L3 puffstage 3-6    661 larva L3 puffstage 7-9    760 white prepupae new    709 white prepupae 12hr    860 white prepupae 24hr    1188 pupae 2d postWPP    676 pupae 3d postWPP    369 pupae 4d postWPP    354 adult male 01day    462 adult male 05day    593 adult male 30day    570 adult female 01day    693 adult female 05day    918 adult female 30day    875 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1201) embryo 02-04hr  (2259) embryo 04-06hr  (2078) embryo 06-08hr  (1863) embryo 08-10hr  (1598) embryo 10-12hr  (1142) embryo 12-14hr  (886) embryo 14-16hr  (1076) embryo 16-18hr  (680) embryo 18-20hr  (419) embryo 20-22hr  (735) embryo 22-24hr  (679) larva L1  (548) larva L2  (443) larva L3 12hr old  (406) larva L3 puffstage 1-2  (359) larva L3 puffstage 3-6  (661) larva L3 puffstage 7-9  (760) white prepupae new  (709) white prepupae 12hr  (860) white prepupae 24hr  (1188) pupae 2d postWPP  (676) pupae 3d postWPP  (369) pupae 4d postWPP  (354) adult male 01day  (462) adult male 05day  (593) adult male 30day  (570) adult female 01day  (693) adult female 05day  (918) adult female 30day  (875) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1201 embryo 02-04hr  2259 embryo 04-06hr  2078 embryo 06-08hr  1863 embryo 08-10hr  1598 embryo 10-12hr    1142 embryo 12-14hr    886 embryo 14-16hr    1076 embryo 16-18hr    680 embryo 18-20hr    419 embryo 20-22hr    735 embryo 22-24hr    679 larva L1    548 larva L2    443 larva L3 12hr old    406 larva L3 puffstage 1-2    359 larva L3 puffstage 3-6    661 larva L3 puffstage 7-9    760 white prepupae new    709 white prepupae 12hr    860 white prepupae 24hr    1188 pupae 2d postWPP    676 pupae 3d postWPP    369 pupae 4d postWPP    354 adult male 01day    462 adult male 05day    593 adult male 30day    570 adult female 01day    693 adult female 05day    918 adult female 30day    875 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1201 embryo 02-04hr    2259 embryo 04-06hr    2078 embryo 06-08hr    1863 embryo 08-10hr    1598 embryo 10-12hr    1142 embryo 12-14hr    886 embryo 14-16hr    1076 embryo 16-18hr    680 embryo 18-20hr    419 embryo 20-22hr    735 embryo 22-24hr    679 larva L1    548 larva L2    443 larva L3 12hr old    406 larva L3 puffstage 1-2    359 larva L3 puffstage 3-6    661 larva L3 puffstage 7-9    760 white prepupae new    709 white prepupae 12hr    860 white prepupae 24hr    1188 pupae 2d postWPP    676 pupae 3d postWPP    369 pupae 4d postWPP    354 adult male 01day    462 adult male 05day    593 adult male 30day    570 adult female 01day    693 adult female 05day    918 adult female 30day    875 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1201 embryo 02-04hr    2259 embryo 04-06hr    2078 embryo 06-08hr    1863 embryo 08-10hr    1598 embryo 10-12hr    1142 embryo 12-14hr    886 embryo 14-16hr    1076 embryo 16-18hr    680 embryo 18-20hr    419 embryo 20-22hr    735 embryo 22-24hr    679 larva L1    548 larva L2    443 larva L3 12hr old    406 larva L3 puffstage 1-2    359 larva L3 puffstage 3-6    661 larva L3 puffstage 7-9    760 white prepupae new    709 white prepupae 12hr    860 white prepupae 24hr    1188 pupae 2d postWPP    676 pupae 3d postWPP    369 pupae 4d postWPP    354 adult male 01day    462 adult male 05day    593 adult male 30day    570 adult female 01day    693 adult female 05day    918 adult female 30day    875 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0030091    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0030091 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0030091 expression level Tissue   Expression Level Larval Central Nervous System    112.625 Larval Midgut    30.8 Larval Hindgut    32.4 Larval Malpighian Tubules    29.9 Larval Fat Body no informative data Larval Salivary Gland    39.4 Larval Trachea    39.375 Larval Carcass    31.35 Adult Head no informative data Adult Eye    48.15 Adult Brain    123.7 Adult Thoracic-Abdominal Ganglion    70.2 Adult Crop    33.9 Adult Midgut    28.8 Adult Hindgut    41.1 Adult Malpighian Tubules no informative data Adult Fat Body    28.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    56.7 Adult Testis    40.5 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    112.625 Larval Midgut    30.8 Larval Hindgut    32.4 Larval Malpighian Tubules    29.9 Larval Fat Body no informative data Larval Salivary Gland    39.4 Larval Trachea    39.375 Larval Carcass    31.35 Adult Head no informative data Adult Eye    48.15 Adult Brain    123.7 Adult Thoracic-Abdominal Ganglion    70.2 Adult Crop    33.9 Adult Midgut    28.8 Adult Hindgut    41.1 Adult Malpighian Tubules no informative data Adult Fat Body    28.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    56.7 Adult Testis    40.5 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    112.625 Larval Midgut    30.8 Larval Hindgut    32.4 Larval Malpighian Tubules    29.9 Larval Fat Body no informative data Larval Salivary Gland    39.4 Larval Trachea    39.375 Larval Carcass    31.35 Adult Head no informative data Adult Eye    48.15 Adult Brain    123.7 Adult Thoracic-Abdominal Ganglion    70.2 Adult Crop    33.9 Adult Midgut    28.8 Adult Hindgut    41.1 Adult Malpighian Tubules no informative data Adult Fat Body    28.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    56.7 Adult Testis    40.5 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    112.625 Larval Midgut    30.8 Larval Hindgut    32.4 Larval Malpighian Tubules    29.9 Larval Fat Body no informative data Larval Salivary Gland    39.4 Larval Trachea    39.375 Larval Carcass    31.35 Adult Head no informative data Adult Eye    48.15 Adult Brain    123.7 Adult Thoracic-Abdominal Ganglion    70.2 Adult Crop    33.9 Adult Midgut    28.8 Adult Hindgut    41.1 Adult Malpighian Tubules no informative data Adult Fat Body    28.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    56.7 Adult Testis    40.5 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0030091 expression level Tissue   Expression Level Larval Central Nervous System    112.625 Larval Midgut    30.8 Larval Hindgut    32.4 Larval Malpighian Tubules    29.9 Larval Fat Body no informative data Larval Salivary Gland    39.4 Larval Trachea    39.375 Larval Carcass    31.35 Adult Head no informative data Adult Eye    48.15 Adult Brain    123.7 Adult Thoracic-Abdominal Ganglion    70.2 Adult Crop    33.9 Adult Midgut    28.8 Adult Hindgut    41.1 Adult Malpighian Tubules no informative data Adult Fat Body    28.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    56.7 Adult Testis    40.5 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    112.625 Larval Midgut    30.8 Larval Hindgut    32.4 Larval Malpighian Tubules    29.9 Larval Fat Body no informative data Larval Salivary Gland    39.4 Larval Trachea    39.375 Larval Carcass    31.35 Adult Head no informative data Adult Eye    48.15 Adult Brain    123.7 Adult Thoracic-Abdominal Ganglion    70.2 Adult Crop    33.9 Adult Midgut    28.8 Adult Hindgut    41.1 Adult Malpighian Tubules no informative data Adult Fat Body    28.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    56.7 Adult Testis    40.5 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    112.625 Larval Midgut    30.8 Larval Hindgut    32.4 Larval Malpighian Tubules    29.9 Larval Fat Body no informative data Larval Salivary Gland    39.4 Larval Trachea    39.375 Larval Carcass    31.35 Adult Head no informative data Adult Eye    48.15 Adult Brain    123.7 Adult Thoracic-Abdominal Ganglion    70.2 Adult Crop    33.9 Adult Midgut    28.8 Adult Hindgut    41.1 Adult Malpighian Tubules no informative data Adult Fat Body    28.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    56.7 Adult Testis    40.5 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    112.625 Larval Midgut    30.8 Larval Hindgut    32.4 Larval Malpighian Tubules    29.9 Larval Fat Body no informative data Larval Salivary Gland    39.4 Larval Trachea    39.375 Larval Carcass    31.35 Adult Head no informative data Adult Eye    48.15 Adult Brain    123.7 Adult Thoracic-Abdominal Ganglion    70.2 Adult Crop    33.9 Adult Midgut    28.8 Adult Hindgut    41.1 Adult Malpighian Tubules no informative data Adult Fat Body    28.3 Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    56.7 Adult Testis    40.5 Adult Male Accessory Gland no informative data Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body no informative data Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head no informative data Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules no informative data Adult Fat Body     Adult Salivary Gland no informative data Adult Heart no informative data Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary     Adult Testis     Adult Male Accessory Gland no informative data Adult Carcass no informative data FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    no informative data   NA  Eye    48.15   NA  Brain    123.7   112.625  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    70.2   NA  Crop    33.9   30.8  Midgut    28.8   32.4  Hindgut    41.1   29.9  Malpighian Tubules    no informative data   no informative data  Fat Body    28.3   39.4  Salivary Gland    no informative data   NA  Heart    no informative data   39.375  Trachea    NA   NA  VirginFemale Spermatheca    no informative data   NA  InseminatedFemale Spermatheca    no informative data   NA  Ovary    56.7   NA  Testis    40.5   NA  Male Accessory Gland    no informative data   31.35  Carcass    no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_17
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030091 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7065-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG7065GD12119 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG7065 Class Mutagen Stocks Known lesion CG7065G17383 P-element activity 1 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG7065 Class Mutagen Stocks Known lesion CG7065GD12119 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG7065GD16811 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG7065HMS00448 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD12119} NA P{GD16811} NA P{TRiP.HMS00448} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG7065G17383 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
	There is no information supporting a biological process, cellular component or molecular function term for this gene. (Based on a review of available data on: 2009-05-29)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG7065 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 58299 DroID - A comprehensive database of gene and protein interactions. • FBgn0030091 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 31844
Orthologs
Genome-wide drosophilid orthologs	Dana\GF19172 Dere\GG18290 Dgri\GH12290 Dmoj\GI15535 Dper\GL26800 Dpse\GA20072 Dsec\GM13721 Dsim\GD16930 Dvir\GJ14879 Dwil\GK25038 Dyak\GE15823
Curated drosophilid orthologs	Dpse\GA20072
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL008714-PA Aedes aegypti (mosquito) AGAP003633-PA Anopheles gambiae (mosquito) XP_623873.1 Apis mellifera (honey bee) XP_001946293.1 Acyrthosiphon pisum (pea aphid) BGIBMGA003350-PA Bombyx mori (silk worm) CPIJ017180 Culex pipens (mosquito) 305135 Daphnia pulex (daphnia) XP_001604137.1 Nasonia vitripennis (wasp) PHUM007373-PA Pediculus humanus (human body louse) XP_974003.1 Tribolium castaneum (red flour beetle) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13945 NV12193 LH21639 FBgn0233387 FBgn0226997 FBgn0202083 FBgn0188510 FBgn0168652 JGI_V11_305135 FBgn0080068 FBgn0164381 FBgn0138284 FBgn0119769 FBgn0110506 FBgn0096183 CPIJ017180 BGIBMGA003350 ACYPI007032 GB12366 AGAP003633 AAEL008714 PHUM190150 GLEAN_05594
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	26633 w* P{EP}CG7065G17383/FM6, w* 32449 y1 sc* v1; P{TRiP.HMS00448}attP2
VDRC	v27828 w1118; P{GD12119}v27828 v50376 w1118; P{GD16811}v50376
Genomic Clones ( 2 )
	BACR04L24 BACR39L04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 27 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD15018 LD35502
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	RE48579 RE48693 RE60096 SD22241
Other clones	10572 10604 30007 54116 105166 119294 214225.8 CK01.6B.E7 CK01.26B.D12 CK01.51A.G6 CK01.90B.D5 EK009420 EK070915 EK110431 EK110463 EK139062 EK306303 EP04341 EP18630 FGH121H02 FGM001D03
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0030091 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 31844
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_132301 RefSeq (Proteins) • NP_572529 DDBJ / EMBL / GenBank • AAF46448 AAL39746 AI455802 AW943291 AY069601 Entrez Gene - A searchable database of RefSeq genes. • 31844 UniProtKB/TrEMBL • Q7YZA2
Other Crossreferences
Linkouts
	BioGRID - A database of protein and genetic interactions • 58299 DroID - A comprehensive database of gene and protein interactions. • FBgn0030091 DRSC - Results from RNAi screens. • FBgn0030091 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030091 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7065-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0030091 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 31844 InParanoid A subset of ortholog calls from InParanoid. • AAEL008714-PA Aedes aegypti (mosquito) AGAP003633-PA Anopheles gambiae (mosquito) XP_623873.1 Apis mellifera (honey bee) XP_001946293.1 Acyrthosiphon pisum (pea aphid) BGIBMGA003350-PA Bombyx mori (silk worm) CPIJ017180 Culex pipens (mosquito) 305135 Daphnia pulex (daphnia) XP_001604137.1 Nasonia vitripennis (wasp) PHUM007373-PA Pediculus humanus (human body louse) XP_974003.1 Tribolium castaneum (red flour beetle) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 31844 modMine - Data generated by the modENCODE project. • FBgn0030091 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13945 NV12193 LH21639 FBgn0233387 FBgn0226997 FBgn0202083 FBgn0188510 FBgn0168652 JGI_V11_305135 FBgn0080068 FBgn0164381 FBgn0138284 FBgn0119769 FBgn0110506 FBgn0096183 CPIJ017180 BGIBMGA003350 ACYPI007032 GB12366 AGAP003633 AAEL008714 PHUM190150 GLEAN_05594
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG7065 (Umemiya et al., 2002, Zhou et al., 2008, Ni et al., 2010.12.1, Dekanty et al., 2010)
Name Synonym
Secondary FlyBase IDs
References ( 13 )
Research paper	Dekanty et al., 2010, PLoS Genet. 6(6): e1000994 Drosophila Genome-Wide RNAi Screen Identifies Multiple Regulators of HIF-Dependent Transcription in Hypoxia. [FBrf0211155] Zhou et al., 2008, Mol. Cell 32(4): 592--599 Comparative analysis of argonaute-dependent small RNA pathways in Drosophila. [FBrf0206362] Glasscock et al., 2005, Genetics 170(4): 1677--1689 The mei-P26 Gene Encodes a RING Finger B-box Coiled-Coil-NHL Protein That Regulates Seizure Susceptibility in Drosophilia. [FBrf0187640] Umemiya et al., 2002, J. Neurobiol. 51(3): 205--214 Forked end: a novel transmembrane protein involved in neuromuscular specificity in Drosophila identified by gain-of-function screening. [FBrf0149069]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Ni et al., 2010.12.1, A genome-scale shRNA resource for transgenic RNAi in Drosophila. A genome-scale shRNA resource for transgenic RNAi in Drosophila. [FBrf0212437] Bellen, 2009.2.6, BDGP_2009_0206.GenExel.xml BDGP_2009_0206.GenExel.xml [FBrf0206623] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
FlyBase analysis	FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]