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Gene Dmel\RpS28b

General Information
Symbol	Dmel\RpS28b	Species	D. melanogaster
Name	Ribosomal protein S28b	Annotation symbol	CG2998
Feature type	protein_coding_gene	FlyBase ID	FBgn0030136
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	8E7-8E7	Sequence location	X:9,448,655..9,449,242 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Ribosomal protein S28b is referred to in FlyBase by the symbol Dmel\RpS28b (CG2998, FBgn0030136). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: structural constituent of ribosome. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: translation. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Nucleic acid-binding, OB-fold; Nucleic acid-binding, OB-fold-like; Ribosomal protein S28e. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1624792_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of RpS28b. Gene sequence location is X:9448655..9449242.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	Sequence features BKN29420 HFA18258
FB2011_10	Controlled Vocabulary Terms day 42 of adulthood day 41 of adulthood day 30 of adulthood day 49 of adulthood day 17 of adulthood day 45 of adulthood day 8 of adulthood day 26 of adulthood day 21 of adulthood day 13 of adulthood day 25 of adulthood day 22 of adulthood day 20 of adulthood day 39 of adulthood day 7 of adulthood day 36 of adulthood day 11 of adulthood day 37 of adulthood day 27 of adulthood day 18 of adulthood day 19 of adulthood day 28 of adulthood day 9 of adulthood day 29 of adulthood adult heart day 40 of adulthood day 16 of adulthood day 24 of adulthood day 15 of adulthood day 33 of adulthood day 43 of adulthood day 47 of adulthood day 38 of adulthood day 32 of adulthood day 48 of adulthood day 23 of adulthood day 35 of adulthood day 12 of adulthood day 10 of adulthood day 31 of adulthood day 34 of adulthood day 44 of adulthood day 14 of adulthood day 46 of adulthood
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 8E7-8E7   Limits computationally determined from genome sequence between P{EP}EP1450&P{EP}EP1356 and P{EP}EP912EP912
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\RpS28b for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) RpS28b-RA FBtr0071360  NM_132340   521   65
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein RpS28b-PA   FBpp0071295   7.5   65   11.10     NP_572568   AAF46503
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein S28e (IPR000289) Nucleic acid-binding, OB-fold (IPR012340) Nucleic acid-binding, OB-fold-like (IPR016027)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA696914   AA801763   AA802950   AA820190   AA978787   AE014298 AAF46503   AI061842   AI062646   AI063797   AI108934   AI109587   AI238730   AI256896   AI293272   AI297621   AI387877   AI455358   AI945538   AY061320 AAL28868   AY231975   AY232136   BG632761   BG636936   BI142066   BI142185   BI166137   BI167442   BI172348   BI212458   BI227836   BI228492   BI231847   BI234863   BI235447   BI236481   BI243526   BI243658   BI352572   BI353545   BI353594   BI354669   BI358438   BI364218   BI365802   BI374433   BI375455   BI375844   BI486840   BI486904   BI487028   BI487128   BI564011   BI566096   BI566441   BI566795   BI566945   BI567547   BI568835   BI568836   BI568972   BI568973   BI568996   BI568997   BI569040   BI569041   BI569511   BI569704   BI569876   BI570042   BI570162   BI571298   BI571323   BI571399   BI571724   BI571827   BI571963   BI572481   BI574859   BI575035   BI575532   BI575678   BI576182   BI576229   BI576847   BI577687   BI579088   BI579170   BI581788   BI581862   BI581994   BI582228   BI582369   BI582889   BI582961   BI583428   BI584006   BI584809   BI585911   BI588023   BI589070   BI589179   BI589208   BI589613   BI589699   BI589869   BI590331   BI590367   BI591027   BI591029   BI591181   BI591202   BI593276   BI604279   BI605292   BI605459   BI606406   BI607467   BI608780   BI610501   BI610656   BI611833   BI612633   BI612636   BI612681   BI612802   BI613552   BI613717   BI614207   BI617071   BI617525   BI619741   BI621074   BI621650   BI621734   BI621746   BI622001   BI623161   BI623806   BI624793   BI625521   BI625620   BI626265   BI626572   BI626703   BI627181   BI627685   BI627714   BI627751   BI628266   BI628338   BI628994   BI629494   BI629968   BI630778   BI631469   BI632553   BI632860   BI634121   BI634134   BI636084   BI637411   BP541223   BP541391   BP541688   BP543481   BP543482   BP543788   BP544346   BP544347   BP544572   BP544573   BP544726   BP544727   BP545015   BP545016   BP547795   BP549979   BP550968   BP551254   BP551255   BP551721   BP551882   BP551883   BP553648   BP553649   BP554632   BP554633   BP555650   BP555651   BP555969   BP555970   BP560379   BQ102879   BX010239   BX010433   BX012869   BX024727   BX035088   CA805120   CA806014   CK131831   CK658304   CK659001   CK659697   CO153062   CO153393   CO153977   CO154159   CO154161   CO154167   CO154590   CO154718   CO155045   CO155150   CO155173   CO155218   CO155396   CO155421   CO155673   CO155711   CO155958   CO156292   CO156774   CO156913   CO156982   CO157117   CO182914   CO184443   CO184925   CO186752   CO191280   CO191365   CO193548   CO194756   CO195655   CO264316   CO266013   CO277188   CO280938   CO284258   CO285829   CO285904   CO293061   CO296359   CO304899   CO305008   CO335622   CO336157   CO336385   CO336470   CO336585   CO336649   CO336848   CO337498   CO337735   CO338114   CO338255   CO338360   CO338570   CO338608   CO338615   CO338681   DQ440266   DQ910367   EC060669   EC061931   EC067300   EC083147   EC083859   EC086634   EC087176   EC194895   EC205007   EC209632   EC218762   EC218776   EC222036   EC237753   EC237765   EC243930   EC260815   EC260854   EC260940   EC261009   EC261061   EC261095   EC261676   EC261814   EC262249   EC263081   EC263744   EC263937   EC264044   EC264162   EC264209   EC264416   EC264601   EC264657   EC264753   EC264785   EC264915   EC265128   EC265261   EC265298   EC265885   EC265995   EC266282   EC266432   EC266600   EC266900   EC267433   EC267452   EC267561   EC267704   EC267928   EV575229   EV575443   EV576829   EV578341   EV578642   EV579299   EV580210   EV580253   EV580774   EV581721   EV581724   EV581735   EV582170   EV582447   EV582672   EV583263   EV583648   EV583975   EV584508   EV584533   EV584929   EV585840   EV586366   EV587080   EV588651   EV590455   EV590679   EV591070   EV594176   EV594955   EV595385   EV595576   EV597444   EV599551   EV599897   EV600380
UniProtKB/Swiss-Prot	Q9W334
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0030136    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0030136 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of extremely high expression to a trough of very high expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0030136 expression level Developmental Stage   Expression Level embryo 00-02hr    68037 embryo 02-04hr    124379 embryo 04-06hr    148116 embryo 06-08hr    153265 embryo 08-10hr    170058 embryo 10-12hr    163153 embryo 12-14hr    139079 embryo 14-16hr    109403 embryo 16-18hr    114309 embryo 18-20hr    109702 embryo 20-22hr    143387 embryo 22-24hr    147725 larva L1    119242 larva L2    134650 larva L3 12hr old    100216 larva L3 puffstage 1-2    104742 larva L3 puffstage 3-6    94009 larva L3 puffstage 7-9    105880 white prepupae new    99460 white prepupae 12hr    91495 white prepupae 24hr    85013 pupae 2d postWPP    82892 pupae 3d postWPP    67899 pupae 4d postWPP    48313 adult male 01day    50914 adult male 05day    45520 adult male 30day    45059 adult female 01day    68418 adult female 05day    103470 adult female 30day    96074 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (68037) embryo 02-04hr  (124379) embryo 04-06hr  (148116) embryo 06-08hr  (153265) embryo 08-10hr  (170058) embryo 10-12hr  (163153) embryo 12-14hr  (139079) embryo 14-16hr  (109403) embryo 16-18hr  (114309) embryo 18-20hr  (109702) embryo 20-22hr  (143387) embryo 22-24hr  (147725) larva L1  (119242) larva L2  (134650) larva L3 12hr old  (100216) larva L3 puffstage 1-2  (104742) larva L3 puffstage 3-6  (94009) larva L3 puffstage 7-9  (105880) white prepupae new  (99460) white prepupae 12hr  (91495) white prepupae 24hr  (85013) pupae 2d postWPP  (82892) pupae 3d postWPP  (67899) pupae 4d postWPP  (48313) adult male 01day  (50914) adult male 05day  (45520) adult male 30day  (45059) adult female 01day  (68418) adult female 05day  (103470) adult female 30day  (96074) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (68037) embryo 02-04hr  (124379) embryo 04-06hr  (148116) embryo 06-08hr  (153265) embryo 08-10hr  (170058) embryo 10-12hr  (163153) embryo 12-14hr  (139079) embryo 14-16hr  (109403) embryo 16-18hr  (114309) embryo 18-20hr  (109702) embryo 20-22hr  (143387) embryo 22-24hr  (147725) larva L1  (119242) larva L2  (134650) larva L3 12hr old  (100216) larva L3 puffstage 1-2  (104742) larva L3 puffstage 3-6  (94009) larva L3 puffstage 7-9  (105880) white prepupae new  (99460) white prepupae 12hr  (91495) white prepupae 24hr  (85013) pupae 2d postWPP  (82892) pupae 3d postWPP  (67899) pupae 4d postWPP  (48313) adult male 01day  (50914) adult male 05day  (45520) adult male 30day  (45059) adult female 01day  (68418) adult female 05day  (103470) adult female 30day  (96074) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (68037) embryo 02-04hr  (124379) embryo 04-06hr  (148116) embryo 06-08hr  (153265) embryo 08-10hr  (170058) embryo 10-12hr  (163153) embryo 12-14hr  (139079) embryo 14-16hr  (109403) embryo 16-18hr  (114309) embryo 18-20hr  (109702) embryo 20-22hr  (143387) embryo 22-24hr  (147725) larva L1  (119242) larva L2  (134650) larva L3 12hr old  (100216) larva L3 puffstage 1-2  (104742) larva L3 puffstage 3-6  (94009) larva L3 puffstage 7-9  (105880) white prepupae new  (99460) white prepupae 12hr  (91495) white prepupae 24hr  (85013) pupae 2d postWPP  (82892) pupae 3d postWPP  (67899) pupae 4d postWPP  (48313) adult male 01day  (50914) adult male 05day  (45520) adult male 30day  (45059) adult female 01day  (68418) adult female 05day  (103470) adult female 30day  (96074) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    68037 embryo 02-04hr    124379 embryo 04-06hr    148116 embryo 06-08hr    153265 embryo 08-10hr    170058 embryo 10-12hr    163153 embryo 12-14hr    139079 embryo 14-16hr    109403 embryo 16-18hr    114309 embryo 18-20hr    109702 embryo 20-22hr    143387 embryo 22-24hr    147725 larva L1    119242 larva L2    134650 larva L3 12hr old    100216 larva L3 puffstage 1-2    104742 larva L3 puffstage 3-6    94009 larva L3 puffstage 7-9    105880 white prepupae new    99460 white prepupae 12hr    91495 white prepupae 24hr    85013 pupae 2d postWPP    82892 pupae 3d postWPP    67899 pupae 4d postWPP    48313 adult male 01day    50914 adult male 05day    45520 adult male 30day    45059 adult female 01day    68418 adult female 05day    103470 adult female 30day    96074 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0030136 expression level Developmental Stage   Expression Level embryo 00-02hr    68037 embryo 02-04hr    124379 embryo 04-06hr    148116 embryo 06-08hr    153265 embryo 08-10hr    170058 embryo 10-12hr    163153 embryo 12-14hr    139079 embryo 14-16hr    109403 embryo 16-18hr    114309 embryo 18-20hr    109702 embryo 20-22hr    143387 embryo 22-24hr    147725 larva L1    119242 larva L2    134650 larva L3 12hr old    100216 larva L3 puffstage 1-2    104742 larva L3 puffstage 3-6    94009 larva L3 puffstage 7-9    105880 white prepupae new    99460 white prepupae 12hr    91495 white prepupae 24hr    85013 pupae 2d postWPP    82892 pupae 3d postWPP    67899 pupae 4d postWPP    48313 adult male 01day    50914 adult male 05day    45520 adult male 30day    45059 adult female 01day    68418 adult female 05day    103470 adult female 30day    96074 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (68037) embryo 02-04hr  (124379) embryo 04-06hr  (148116) embryo 06-08hr  (153265) embryo 08-10hr  (170058) embryo 10-12hr  (163153) embryo 12-14hr  (139079) embryo 14-16hr  (109403) embryo 16-18hr  (114309) embryo 18-20hr  (109702) embryo 20-22hr  (143387) embryo 22-24hr  (147725) larva L1  (119242) larva L2  (134650) larva L3 12hr old  (100216) larva L3 puffstage 1-2  (104742) larva L3 puffstage 3-6  (94009) larva L3 puffstage 7-9  (105880) white prepupae new  (99460) white prepupae 12hr  (91495) white prepupae 24hr  (85013) pupae 2d postWPP  (82892) pupae 3d postWPP  (67899) pupae 4d postWPP  (48313) adult male 01day  (50914) adult male 05day  (45520) adult male 30day  (45059) adult female 01day  (68418) adult female 05day  (103470) adult female 30day  (96074) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (68037) embryo 02-04hr  (124379) embryo 04-06hr  (148116) embryo 06-08hr  (153265) embryo 08-10hr  (170058) embryo 10-12hr  (163153) embryo 12-14hr  (139079) embryo 14-16hr  (109403) embryo 16-18hr  (114309) embryo 18-20hr  (109702) embryo 20-22hr  (143387) embryo 22-24hr  (147725) larva L1  (119242) larva L2  (134650) larva L3 12hr old  (100216) larva L3 puffstage 1-2  (104742) larva L3 puffstage 3-6  (94009) larva L3 puffstage 7-9  (105880) white prepupae new  (99460) white prepupae 12hr  (91495) white prepupae 24hr  (85013) pupae 2d postWPP  (82892) pupae 3d postWPP  (67899) pupae 4d postWPP  (48313) adult male 01day  (50914) adult male 05day  (45520) adult male 30day  (45059) adult female 01day  (68418) adult female 05day  (103470) adult female 30day  (96074) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (68037) embryo 02-04hr  (124379) embryo 04-06hr  (148116) embryo 06-08hr  (153265) embryo 08-10hr  (170058) embryo 10-12hr  (163153) embryo 12-14hr  (139079) embryo 14-16hr  (109403) embryo 16-18hr  (114309) embryo 18-20hr  (109702) embryo 20-22hr  (143387) embryo 22-24hr  (147725) larva L1  (119242) larva L2  (134650) larva L3 12hr old  (100216) larva L3 puffstage 1-2  (104742) larva L3 puffstage 3-6  (94009) larva L3 puffstage 7-9  (105880) white prepupae new  (99460) white prepupae 12hr  (91495) white prepupae 24hr  (85013) pupae 2d postWPP  (82892) pupae 3d postWPP  (67899) pupae 4d postWPP  (48313) adult male 01day  (50914) adult male 05day  (45520) adult male 30day  (45059) adult female 01day  (68418) adult female 05day  (103470) adult female 30day  (96074) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    68037 embryo 02-04hr    124379 embryo 04-06hr    148116 embryo 06-08hr    153265 embryo 08-10hr    170058 embryo 10-12hr    163153 embryo 12-14hr    139079 embryo 14-16hr    109403 embryo 16-18hr    114309 embryo 18-20hr    109702 embryo 20-22hr    143387 embryo 22-24hr    147725 larva L1    119242 larva L2    134650 larva L3 12hr old    100216 larva L3 puffstage 1-2    104742 larva L3 puffstage 3-6    94009 larva L3 puffstage 7-9    105880 white prepupae new    99460 white prepupae 12hr    91495 white prepupae 24hr    85013 pupae 2d postWPP    82892 pupae 3d postWPP    67899 pupae 4d postWPP    48313 adult male 01day    50914 adult male 05day    45520 adult male 30day    45059 adult female 01day    68418 adult female 05day    103470 adult female 30day    96074 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0030136    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0030136 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0030136 expression level Tissue   Expression Level Larval Central Nervous System    2792.825 Larval Midgut    5400.8 Larval Hindgut    4650.2 Larval Malpighian Tubules    5759.3 Larval Fat Body    8046 Larval Salivary Gland    8004.1 Larval Trachea    6940.775 Larval Carcass    5118.025 Adult Head    5068.3 Adult Eye    6908.775 Adult Brain    3575.2 Adult Thoracic-Abdominal Ganglion    4888 Adult Crop    6677.8 Adult Midgut    5889 Adult Hindgut    5408.9 Adult Malpighian Tubules    5344.3 Adult Fat Body    5770.3 Adult Salivary Gland    14654.8 Adult Heart    7737.9 Adult VirginFemale Spermatheca    5300.5 Adult InseminatedFemale Spermatheca    5566 Adult Ovary    3682.8 Adult Testis    1388.2 Adult Male Accessory Gland    10050.1 Adult Carcass    6443.4 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (2792.825) Larval Midgut  (5400.8) Larval Hindgut  (4650.2) Larval Malpighian Tubules  (5759.3) Larval Fat Body  (8046) Larval Salivary Gland  (8004.1) Larval Trachea  (6940.775) Larval Carcass  (5118.025) Adult Head  (5068.3) Adult Eye  (6908.775) Adult Brain  (3575.2) Adult Thoracic-Abdominal Ganglion  (4888) Adult Crop  (6677.8) Adult Midgut  (5889) Adult Hindgut  (5408.9) Adult Malpighian Tubules  (5344.3) Adult Fat Body  (5770.3) Adult Salivary Gland  (14654.8) Adult Heart  (7737.9) Adult VirginFemale Spermatheca  (5300.5) Adult InseminatedFemale Spermatheca  (5566) Adult Ovary  (3682.8) Adult Testis  (1388.2) Adult Male Accessory Gland  (10050.1) Adult Carcass  (6443.4) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System  (2792.825) Larval Midgut  (5400.8) Larval Hindgut  (4650.2) Larval Malpighian Tubules  (5759.3) Larval Fat Body  (8046) Larval Salivary Gland  (8004.1) Larval Trachea  (6940.775) Larval Carcass  (5118.025) Adult Head  (5068.3) Adult Eye  (6908.775) Adult Brain  (3575.2) Adult Thoracic-Abdominal Ganglion  (4888) Adult Crop  (6677.8) Adult Midgut  (5889) Adult Hindgut  (5408.9) Adult Malpighian Tubules  (5344.3) Adult Fat Body  (5770.3) Adult Salivary Gland  (14654.8) Adult Heart  (7737.9) Adult VirginFemale Spermatheca  (5300.5) Adult InseminatedFemale Spermatheca  (5566) Adult Ovary  (3682.8) Adult Testis  (1388.2) Adult Male Accessory Gland  (10050.1) Adult Carcass  (6443.4) Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    2792.825 Larval Midgut    5400.8 Larval Hindgut    4650.2 Larval Malpighian Tubules    5759.3 Larval Fat Body    8046 Larval Salivary Gland    8004.1 Larval Trachea    6940.775 Larval Carcass    5118.025 Adult Head    5068.3 Adult Eye    6908.775 Adult Brain    3575.2 Adult Thoracic-Abdominal Ganglion    4888 Adult Crop    6677.8 Adult Midgut    5889 Adult Hindgut    5408.9 Adult Malpighian Tubules    5344.3 Adult Fat Body    5770.3 Adult Salivary Gland    14654.8 Adult Heart    7737.9 Adult VirginFemale Spermatheca    5300.5 Adult InseminatedFemale Spermatheca    5566 Adult Ovary    3682.8 Adult Testis    1388.2 Adult Male Accessory Gland    10050.1 Adult Carcass    6443.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0030136 expression level Tissue   Expression Level Larval Central Nervous System    2792.825 Larval Midgut    5400.8 Larval Hindgut    4650.2 Larval Malpighian Tubules    5759.3 Larval Fat Body    8046 Larval Salivary Gland    8004.1 Larval Trachea    6940.775 Larval Carcass    5118.025 Adult Head    5068.3 Adult Eye    6908.775 Adult Brain    3575.2 Adult Thoracic-Abdominal Ganglion    4888 Adult Crop    6677.8 Adult Midgut    5889 Adult Hindgut    5408.9 Adult Malpighian Tubules    5344.3 Adult Fat Body    5770.3 Adult Salivary Gland    14654.8 Adult Heart    7737.9 Adult VirginFemale Spermatheca    5300.5 Adult InseminatedFemale Spermatheca    5566 Adult Ovary    3682.8 Adult Testis    1388.2 Adult Male Accessory Gland    10050.1 Adult Carcass    6443.4 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (2792.825) Larval Midgut  (5400.8) Larval Hindgut  (4650.2) Larval Malpighian Tubules  (5759.3) Larval Fat Body  (8046) Larval Salivary Gland  (8004.1) Larval Trachea  (6940.775) Larval Carcass  (5118.025) Adult Head  (5068.3) Adult Eye  (6908.775) Adult Brain  (3575.2) Adult Thoracic-Abdominal Ganglion  (4888) Adult Crop  (6677.8) Adult Midgut  (5889) Adult Hindgut  (5408.9) Adult Malpighian Tubules  (5344.3) Adult Fat Body  (5770.3) Adult Salivary Gland  (14654.8) Adult Heart  (7737.9) Adult VirginFemale Spermatheca  (5300.5) Adult InseminatedFemale Spermatheca  (5566) Adult Ovary  (3682.8) Adult Testis  (1388.2) Adult Male Accessory Gland  (10050.1) Adult Carcass  (6443.4) Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System  (2792.825) Larval Midgut  (5400.8) Larval Hindgut  (4650.2) Larval Malpighian Tubules  (5759.3) Larval Fat Body  (8046) Larval Salivary Gland  (8004.1) Larval Trachea  (6940.775) Larval Carcass  (5118.025) Adult Head  (5068.3) Adult Eye  (6908.775) Adult Brain  (3575.2) Adult Thoracic-Abdominal Ganglion  (4888) Adult Crop  (6677.8) Adult Midgut  (5889) Adult Hindgut  (5408.9) Adult Malpighian Tubules  (5344.3) Adult Fat Body  (5770.3) Adult Salivary Gland  (14654.8) Adult Heart  (7737.9) Adult VirginFemale Spermatheca  (5300.5) Adult InseminatedFemale Spermatheca  (5566) Adult Ovary  (3682.8) Adult Testis  1388.2 Adult Male Accessory Gland  (10050.1) Adult Carcass  (6443.4) Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    2792.825 Larval Midgut    5400.8 Larval Hindgut    4650.2 Larval Malpighian Tubules    5759.3 Larval Fat Body    8046 Larval Salivary Gland    8004.1 Larval Trachea    6940.775 Larval Carcass    5118.025 Adult Head    5068.3 Adult Eye    6908.775 Adult Brain    3575.2 Adult Thoracic-Abdominal Ganglion    4888 Adult Crop    6677.8 Adult Midgut    5889 Adult Hindgut    5408.9 Adult Malpighian Tubules    5344.3 Adult Fat Body    5770.3 Adult Salivary Gland    14654.8 Adult Heart    7737.9 Adult VirginFemale Spermatheca    5300.5 Adult InseminatedFemale Spermatheca    5566 Adult Ovary    3682.8 Adult Testis    1388.2 Adult Male Accessory Gland    10050.1 Adult Carcass    6443.4 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    5068.3   NA  Eye    6908.775   NA  Brain    3575.2   2792.825  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    4888   NA  Crop    6677.8   5400.8  Midgut    5889   4650.2  Hindgut    5408.9   5759.3  Malpighian Tubules    5344.3   8046  Fat Body    5770.3   8004.1  Salivary Gland    14654.8   NA  Heart    7737.9   6940.775  Trachea    NA   NA  VirginFemale Spermatheca    5300.5   NA  InseminatedFemale Spermatheca    5566   NA  Ovary    3682.8   NA  Testis    1388.2   NA  Male Accessory Gland    10050.1   5118.025  Carcass    6443.4 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_22
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030136 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG2998-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal, with Scer\GAL4pnr-MD237 RpS28bGD13671 RpS28bGD15553 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of RpS28b Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 5 )
For All Alleles Carried on Transgenic Constructs Show
Allele of RpS28b Class Mutagen Stocks Known lesion RpS28bGD13671 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes RpS28bGD15553 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes RpS28bHMS00635 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes RpS28bKK109420 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes RpS28bGD16844 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD13671} NA P{GD15553} NA P{GD16844} NA P{KK109420} NA P{TRiP.HMS00635} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{SUPor-P}l(1)G0320KG03129 NA
Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
lipid particle inferred from direct assay (Beller et al., 2006)
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
structural constituent of ribosome inferred from sequence or structural similarity with NCBI_gi:4506715 (FlyBase, 1992-)
Biological Process
CV term Evidence References
translation inferred from electronic annotation with InterPro:IPR000289 (FlyBase Curators et al., 2004-)
Cellular Component
CV term Evidence References
cytosolic small ribosomal subunit inferred from sequence or structural similarity with NCBI_gi:4506715 (FlyBase, 1992-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions RpS28b allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 58339 DroID - A comprehensive database of gene and protein interactions. • FBgn0030136 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 31897
Orthologs
Genome-wide drosophilid orthologs	Dana\GF21783 Dere\GG18316 Dgri\GH12901 Dmoj\GI14378 Dpse\GA15566 Dsec\GM11375 Dsim\GD16052 Dvir\GJ19416 Dwil\GK25380 Dyak\GE17798
Curated drosophilid orthologs	Dpse\GA15566   Dyak\GE17798
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL006860-PA Aedes aegypti (mosquito) AGAP003412-PA Anopheles gambiae (mosquito) XP_001119886.1 Apis mellifera (honey bee) NP_001119669.1 Acyrthosiphon pisum (pea aphid) NP_001119670.1 Acyrthosiphon pisum (pea aphid) XP_001943747.1 Acyrthosiphon pisum (pea aphid) At3g10090.1 Arabidopsis thaliana (wall cress) At5g03850.1 Arabidopsis thaliana (wall cress) 12294 Batrachochytrium dendrobatidis (chytrid fungus) XP_001895164.1 Brugia malayi (roundworm nematode) BGIBMGA011948-PA Bombyx mori (silk worm) ENSBTAP00000003201 Bos taurus (bovine) CAF0007095 Candida albicans (a form of yeast) CBP09372 Caenorhabditis briggsae (nematode) CE21842 Caenorhabditis elegans (worm) ENSCAFP00000027316 Canis familiaris (dog) CAGL0K06061g Candida glabrata (haploid yeast) CAGL0L04510g Candida glabrata (haploid yeast) ENSCINP00000004592 Ciona intestinalis (sea squirt) JA00514 Caenorhabditis japonica (nematode) CMO024C Cyanidioschyzon merolae (red alga) CPIJ015554 Culex pipens (mosquito) CPIJ015556 Culex pipens (mosquito) ENSCPOP00000017409 Cavia porcellus (guinea pig) 144646 Chlamidomonas reinhardtii (green alga) RP22144 Caenorhabditis remanei (nematode) 163836 Capitella spl (polychaete worm) DEHA2D14256g Debaryomyces Hansenii (yeast) DEHA2F22748g Debaryomyces Hansenii (yeast) 128589 Daphnia pulex (daphnia) ENSDARP00000052062 Danio rerio (zebra fish) ENSECAP00000014817 Equus caballus (horse) XP_650750 Entamoeba histolytica (anaerobic protozoan) XP_652698 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000020533 Gymnopilus aculeatus (mushroom) ENSGALP00000040484 Gallus gallus (chicken) GL50803_3570 Giardia lamblia (flagellated protozoan) 72007 Hypsipyla robusta (cedar shoot borer) KLLA0F20383g Kluyveromyces lactis (yeast) 150772 Lottia gigantea (owl limpet) 28421 Monocosta brevicollis (choanoflagellate) ENSMODP00000004765 Monodelphis domestica (gray opossum) ENSMMUP00000031886 Macaca mulatta (rhesus monkey) ENSMUSP00000110013 Mus musculus (house mouse) 149719 Nematostella vectensis (starlet anemone) XP_001606958.1 Nasonia vitripennis (wasp) ENSORLP00000006626 Oryzias latipes (japanese killifish) LOC_Os10g27174.1 Oryza sativa (asian rice) 33997 Ostreococcus tauri (green alga) PHUM003539-PA Pediculus humanus (human body louse) PP04114 Pristionchus pacificus (nematode) 198079 Physcomitrella patens (moss) 206518 Physcomitrella patens (moss) ENSPPYP00000002683 Pongo pygmaeus (orangutan) 725361 Populus trichocarpa (black cottonwood) 820186 Populus trichocarpa (black cottonwood) 835446 Populus trichocarpa (black cottonwood) ENSRNOP00000039276 Rattus norvegicus (norway rat) 4745717 Sorghum bicolor (sorghum) 4871194 Sorghum bicolor (sorghum) YLR264W Saccharomyces cerevisiae (budding yeast) YOR167C Saccharomyces cerevisiae (budding yeast) Smp_026100 Schistosoma mansoni (trematode parasite) SPAC25G10.06 Schizosaccharomyces pombe (fission yeast) SPCC285.15c Schizosaccharomyces pombe (fission yeast) XP_001190124.1 Strongylocentrotus purpuratus (purple sea urchin) XP_001200730.1 Strongylocentrotus purpuratus (purple sea urchin) XP_971000.1 Tribolium castaneum (red flour beetle) ENSTNIP00000013997 Tetraodon nigroviridis (green spotted pufferfish) 38925 Thalassiosira pseudonana (marine diatom) ENSTRUP00000023160 Takifugu rubripes (pufferfish Takifugu) 82012.m00109 Trichomonas vaginalis (parasitic flagellated protozoan) 82184.m00096 Trichomonas vaginalis (parasitic flagellated protozoan) 89135.m00239 Trichomonas vaginalis (parasitic flagellated protozoan) 89311.m00075 Trichomonas vaginalis (parasitic flagellated protozoan) 89311.m00076 Trichomonas vaginalis (parasitic flagellated protozoan) 91481.m00046 Trichomonas vaginalis (parasitic flagellated protozoan) 95634.m00072 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000047407 Xenopus tropicalis (frog) YALI0C05148g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB16949 NV11392 LH13681 FBgn0240609 FBgn0068343 FBgn0227339 FBgn0206559 FBgn0187691 FBgn0167128 FBgn0166318 JGI_V11_128589 FBgn0075583 FBgn0137130 FBgn0039739 FBgn0120380 FBgn0110532 FBgn0104266 FBgn0098783 CPIJ015556 CPIJ015554 BGIBMGA011948 ACYPI008478 ACYPI000048 ACYPI000047 GB13692 AGAP003412 AAEL006860 PHUM521030 GLEAN_11517
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	32850 y1 sc* v1; P{TRiP.HMS00635}attP2
VDRC	v107810 P{KK109420}VIE-260B v35783 w1118; P{GD13671}v35783 v35784 w1118; P{GD13671}v35784 v42417 w1118; P{GD15553}v42417/TM3 v42419 w1118; P{GD15553}v42419/TM3
Genomic Clones ( 1 )
	BACR18F10 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 323 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD23674
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH01931 GH02966 GH03777 GH07417 GH08823 GH13425 GH14832 GH16426 GH18558 GM06628 GM08693 GM12937 GM19850 GM24110 GM24340 GM27817 LD32946 LP03596 LP11957 LP12852 LP15145 LP16386 LP17638 RE06168 RE07830 RE24386 RE30631 RE31289 RE32540 RE41363 RE45210 RE49282 RE51182 RE62022 RE63275 RE71403 RH02047 RH02279 RH03068 RH03170 RH03372 RH03936 RH03975 RH04730 RH04912 RH04934 RH06140 RH06169 RH06417 RH07128 RH07286 RH11268 RH13475 RH15992 RH16204 RH18257 RH19676 RH21386 RH22756 RH24091 RH29021 RH30746 RH31236 RH31530 RH31568 RH33488 RH34979 RH37337 RH37361 RH37967 RH41616 RH41773 RH42727 RH42937 RH43531 RH47284 RH47888 RH50841 RH52360 RH53030 RH53806 RH55252 RH56154 RH56625 RH56708 RH58371 RH58915 RH60077 RH61048 RH64479 RH65967 RH66081 RH66833 RH67722 RH68417 RH69058 RH69096 RH69159 RH70871 RH71068 RH72850 RH74544 SD14764 SD16063 SD16194 SD17652 SD19426 SD26362 SD26750
Other clones	1705 12254 14593 30451 37596 41877 72711 80559 124316 124742 190009 193482 475318 521804 522360 522511 523007 523199 523203 523211 523909 524045 524376 524478 524497 524812 524837 525454 525499 525810 526999 528229 533457 533533 533937 533982 542556 557061 557800 558016 558083 561910 569171 569965 571199 572803 572841 bs14a04 CK01.25C.C12 CK01.78A.A6 CK01.78C.A6 Dmel_dig_001568_0627_3768 Dmel_dig_003852_0692_0426 Dmel_dig_004683_0705_2392 Dmel_dig_004836_0590_1567 Dmel_dig_006709_0696_1037 Dmel_dig_006923_0617_2552 Dmel_dig_007789_0687_0582 Dmel_dig_007985_0706_1285 Dmel_dig_008919_0593_0771 Dmel_dig_009524_0632_1443 Dmel_dig_011845_0680_2709 Dmel_dig_012173_0596_2193 Dmel_dig_014160_0680_3582 Dmel_dig_014275_0606_1439 Dmel_dig_014335_0620_2442 Dmel_dig_015051_0623_2010 Dmel_dig_015683_0686_2327 Dmel_dig_016453_0582_2324 Dmel_dig_018033_0662_1131 Dmel_dig_018281_0621_2252 Dmel_dig_018956_0716_1895 Dmel_dig_020882_0582_3268 Dmel_neb_009420_0853_2553 Dmel_neb_010626_0591_1710 Dmel_neb_010749_0081_1479 Dmel_neb_011111_0683_2261 Dmel_neb_011833_0601_2229 Dmel_neb_013075_0440_2267 Dmel_neb_013190_0894_1977 Dmel_neb_013559_0388_2027 Dmel_neb_013575_0376_1829 Dmel_neb_014532_0939_1824 Dmel_neb_014616_0943_3441 Dmel_neb_014891_0137_0426 Dmel_neb_015446_0179_1906 Dmel_neb_015520_0568_1382 EC24274 EC28103 EC28801 EC30622 EC30761 EC36369 EC39173 EC40735 EK022742 EK060835 EK061135 EK123254 EK138455 EK144707 EK155526 EK165617 EK201613 EK213448 EK246703 EK246938 EN01208 EN01862 EN03230 EN03619 EN03622 EN03631 EN04425 EN04648 EN05252 EN05454 EN05515 EN05607 EN05954 EN06023 EN06537 EN06615 EN07113 EN07758 EN09063 EN09547 EN09710 EN09953 EN10842 EN11945 EN12429 EN12609 EN12831 EN12947 EN13348 EN14653 EN15205 EN15961 EN16326 EN16609 EN17114 EN17157 EN17203 EN17405 ESG0116c.B21_D10 ESG0120c.B21_H01 FGA011F09 FGC001B06 FGC004D01 FGC020F12 FGC022D05 FGC025D05 FGC026F03 FGC027D12 FGC029A08 FGH120G07 FGM104E12 FGM210C01 FGM211H04 FGM214D09 FGM215D06 FGM225E09 FGM230H08 FGM236D08 FGM238D03 FGX001F12 RE14695 RE17553 RE25215 RE26049 RE41187 RE63736 RE70316 RE70386 RE70533 RE70640 RE73062 RE73158 RH01130 RH01218 RH01230 RH01254 RH01601 RH01836 RH02435 RH04732 RH07005 RH08008 RH19496 RH19855 RH20187 RH20412 RH21312 RH22038 RH25613 RH27406 RH27594 RH31453 RH32689 RH32751 RH35213 RH35685 RH36542 RH36755 RH41567 RH41571 RH53133 RH53145 RH57778 RH67554 RH69587 UUGC0273
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0030136 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 31897
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments	"RpS28b" likely corresponds to "M(1)8F". (Marygold et al., 2007) The RpS28a gene may have been derived from the RpS28b gene by retroposition. (Dai et al., 2006)
Other Comments
	Likely Minute gene. (Marygold et al., 2007) RpS28b lies in a gap in deletion coverage. (Marygold et al., 2007)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_132340 RefSeq (Proteins) • NP_572568 DDBJ / EMBL / GenBank • AA820190 AAF46503 AAL28868 AI108934 AI455358 AI945538 AY061320 Entrez Gene - A searchable database of RefSeq genes. • 31897 UniProtKB/Swiss-Prot • Q9W334
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein S28e (IPR000289) Nucleic acid-binding, OB-fold (IPR012340) Nucleic acid-binding, OB-fold-like (IPR016027)
Linkouts
	BioGRID - A database of protein and genetic interactions • 58339 DroID - A comprehensive database of gene and protein interactions. • FBgn0030136 DRSC - Results from RNAi screens. • FBgn0030136 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030136 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG2998-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0030136 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 31897 InParanoid A subset of ortholog calls from InParanoid. • AAEL006860-PA Aedes aegypti (mosquito) AGAP003412-PA Anopheles gambiae (mosquito) XP_001119886.1 Apis mellifera (honey bee) NP_001119669.1 Acyrthosiphon pisum (pea aphid) NP_001119670.1 Acyrthosiphon pisum (pea aphid) XP_001943747.1 Acyrthosiphon pisum (pea aphid) At3g10090.1 Arabidopsis thaliana (wall cress) At5g03850.1 Arabidopsis thaliana (wall cress) 12294 Batrachochytrium dendrobatidis (chytrid fungus) XP_001895164.1 Brugia malayi (roundworm nematode) BGIBMGA011948-PA Bombyx mori (silk worm) ENSBTAP00000003201 Bos taurus (bovine) CAF0007095 Candida albicans (a form of yeast) CBP09372 Caenorhabditis briggsae (nematode) CE21842 Caenorhabditis elegans (worm) ENSCAFP00000027316 Canis familiaris (dog) CAGL0K06061g Candida glabrata (haploid yeast) CAGL0L04510g Candida glabrata (haploid yeast) ENSCINP00000004592 Ciona intestinalis (sea squirt) JA00514 Caenorhabditis japonica (nematode) CMO024C Cyanidioschyzon merolae (red alga) CPIJ015554 Culex pipens (mosquito) CPIJ015556 Culex pipens (mosquito) ENSCPOP00000017409 Cavia porcellus (guinea pig) 144646 Chlamidomonas reinhardtii (green alga) RP22144 Caenorhabditis remanei (nematode) 163836 Capitella spl (polychaete worm) DEHA2D14256g Debaryomyces Hansenii (yeast) DEHA2F22748g Debaryomyces Hansenii (yeast) 128589 Daphnia pulex (daphnia) ENSDARP00000052062 Danio rerio (zebra fish) ENSECAP00000014817 Equus caballus (horse) XP_650750 Entamoeba histolytica (anaerobic protozoan) XP_652698 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000020533 Gymnopilus aculeatus (mushroom) ENSGALP00000040484 Gallus gallus (chicken) GL50803_3570 Giardia lamblia (flagellated protozoan) 72007 Hypsipyla robusta (cedar shoot borer) KLLA0F20383g Kluyveromyces lactis (yeast) 150772 Lottia gigantea (owl limpet) 28421 Monocosta brevicollis (choanoflagellate) ENSMODP00000004765 Monodelphis domestica (gray opossum) ENSMMUP00000031886 Macaca mulatta (rhesus monkey) ENSMUSP00000110013 Mus musculus (house mouse) 149719 Nematostella vectensis (starlet anemone) XP_001606958.1 Nasonia vitripennis (wasp) ENSORLP00000006626 Oryzias latipes (japanese killifish) LOC_Os10g27174.1 Oryza sativa (asian rice) 33997 Ostreococcus tauri (green alga) PHUM003539-PA Pediculus humanus (human body louse) PP04114 Pristionchus pacificus (nematode) 198079 Physcomitrella patens (moss) 206518 Physcomitrella patens (moss) ENSPPYP00000002683 Pongo pygmaeus (orangutan) 725361 Populus trichocarpa (black cottonwood) 820186 Populus trichocarpa (black cottonwood) 835446 Populus trichocarpa (black cottonwood) ENSRNOP00000039276 Rattus norvegicus (norway rat) 4745717 Sorghum bicolor (sorghum) 4871194 Sorghum bicolor (sorghum) YLR264W Saccharomyces cerevisiae (budding yeast) YOR167C Saccharomyces cerevisiae (budding yeast) Smp_026100 Schistosoma mansoni (trematode parasite) SPAC25G10.06 Schizosaccharomyces pombe (fission yeast) SPCC285.15c Schizosaccharomyces pombe (fission yeast) XP_001190124.1 Strongylocentrotus purpuratus (purple sea urchin) XP_001200730.1 Strongylocentrotus purpuratus (purple sea urchin) XP_971000.1 Tribolium castaneum (red flour beetle) ENSTNIP00000013997 Tetraodon nigroviridis (green spotted pufferfish) 38925 Thalassiosira pseudonana (marine diatom) ENSTRUP00000023160 Takifugu rubripes (pufferfish Takifugu) 82012.m00109 Trichomonas vaginalis (parasitic flagellated protozoan) 82184.m00096 Trichomonas vaginalis (parasitic flagellated protozoan) 89135.m00239 Trichomonas vaginalis (parasitic flagellated protozoan) 89311.m00075 Trichomonas vaginalis (parasitic flagellated protozoan) 89311.m00076 Trichomonas vaginalis (parasitic flagellated protozoan) 91481.m00046 Trichomonas vaginalis (parasitic flagellated protozoan) 95634.m00072 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000047407 Xenopus tropicalis (frog) YALI0C05148g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 31897 modMine - Data generated by the modENCODE project. • FBgn0030136 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB16949 NV11392 LH13681 FBgn0240609 FBgn0068343 FBgn0227339 FBgn0206559 FBgn0187691 FBgn0167128 FBgn0166318 JGI_V11_128589 FBgn0075583 FBgn0137130 FBgn0039739 FBgn0120380 FBgn0110532 FBgn0104266 FBgn0098783 CPIJ015556 CPIJ015554 BGIBMGA011948 ACYPI008478 ACYPI000048 ACYPI000047 GB13692 AGAP003412 AAEL006860 PHUM521030 GLEAN_11517
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	CG2998 (Dai et al., 2006, Marygold et al., 2007, Keleman et al., 2009.8.5, Ni et al., 2010.12.1, Cammarato et al., 2011) RpS28b (Beller et al., 2006, Marygold et al., 2007, Zhou et al., 2008)
Name Synonym	Ribosomal protein S28b (Ashburner and Marygold, 2004.7.2, Cammarato et al., 2011)
Secondary FlyBase IDs
References ( 22 )
Generate a list of	All references relating to this gene ( 22 )
List References by type	Research paper  ( 4 ) Supplementary material  ( 6 ) Personal communication to FlyBase  ( 6 ) FlyBase analysis  ( 1 ) Computer file  ( 2 ) Curated genome annotation  ( 1 ) Automatic genome annotation  ( 1 )
Recent research papers ( 1 )
	Booker et al., 2011, BMC Genomics 12: 50 False negative rates in Drosophila cell-based RNAi screens: a case study. [FBrf0212969] Show all research papers ...