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Gene Dmel\CG1640

General Information
Symbol	Dmel\CG1640	Species	D. melanogaster
Name		Annotation symbol	CG1640
Feature type	protein_coding_gene	FlyBase ID	FBgn0030478
Gene Model Status	Current	Stock availability	13 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	11F1-11F1	Sequence location	X:13,264,639..13,274,193 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG1640 (FBgn0030478). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: L-alanine:2-oxoglutarate aminotransferase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: biosynthetic process. 14 alleles are reported. The phenotype of these alleles is annotated with: trichogen cell. It has 6 annotated transcripts and 6 annotated polypeptides. Protein features are: Aminotransferase, class I/classII; Pyridoxal phosphate-dependent transferase, major domain; Pyridoxal phosphate-dependent transferase, major region, subdomain 1; Pyridoxal phosphate-dependent transferase, major region, subdomain 2. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 and 18-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at high levels. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval fat body, larval salivary gland. Comments on Affy2 ProbeSet: ProbeSet 1636546_s_at completely aligns to an exonic region common to each of the 6 FlyBase-annotated transcript isoforms of CG1640. Gene sequence location is X:13264639..13274193.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2011_10	References Knowles-Barley, 2011.8.24, BrainTrap expression curation. Controlled Vocabulary Terms day 42 of adulthood day 41 of adulthood day 30 of adulthood day 49 of adulthood day 17 of adulthood day 45 of adulthood day 6 of adulthood day 5 of adulthood day 8 of adulthood day 26 of adulthood day 21 of adulthood day 13 of adulthood day 25 of adulthood day 22 of adulthood day 20 of adulthood day 39 of adulthood day 7 of adulthood day 36 of adulthood day 11 of adulthood day 37 of adulthood day 27 of adulthood day 18 of adulthood day 19 of adulthood day 28 of adulthood day 9 of adulthood day 29 of adulthood adult heart day 40 of adulthood day 16 of adulthood day 24 of adulthood day 15 of adulthood day 33 of adulthood day 43 of adulthood day 47 of adulthood day 38 of adulthood day 32 of adulthood day 48 of adulthood day 35 of adulthood day 23 of adulthood day 12 of adulthood day 10 of adulthood day 31 of adulthood spermatozoon day 34 of adulthood day 44 of adulthood day 14 of adulthood male day 46 of adulthood
FB2012_01	Sequence features BKN21205 HFA19750
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 11F1-11F1   Limits computationally determined from genome sequence between P{EP}EP1461 and P{EP}CG1640EP1626
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG1640 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG1640-RA FBtr0073773  NM_132651   2624   568 CG1640-RB FBtr0073769  NM_167365   2488   575 CG1640-RC FBtr0073770  NM_167366   2554   568 CG1640-RD FBtr0073771  NM_167367   2507   568 CG1640-RE FBtr0073772  NM_167368   2353   568 CG1640-RF FBtr0073774  NM_167369   2783   568
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG1640-PA   FBpp0073604   63.1   568   9.27     NP_572879   AAF48262 CG1640-PB   FBpp0073600   64.0   575   9.49     NP_727696   AAF48263 CG1640-PC   FBpp0073601   63.1   568   9.27     NP_727697   AAN09325 CG1640-PD   FBpp0073602   63.1   568   9.27     NP_727698   AAN09326 CG1640-PE   FBpp0073603   63.1   568   9.27     NP_727699   AAN09327 CG1640-PF   FBpp0073605   63.1   568   9.27     NP_727700   AAN09328
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Aminotransferase, class I/classII (IPR004839) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (IPR015421) Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (IPR015422) Pyridoxal phosphate-dependent transferase, major domain (IPR015424)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA697958   AA698355   AA801813   AA817222   AA938843   AA951040   AA978624   AA979555   AE014298 AAF48262   AE014298 AAF48263   AE014298 AAN09325   AE014298 AAN09326   AE014298 AAN09327   AE014298 AAN09328   AI063275   AI107622   AI108130   AI108203   AI109709   AI110202   AI113687   AI134609   AI258233   AI293766   AI389501   AI402673   AI404064   AI405202   AI455152   AI533696   AI533697   AI542579   AI543522   AI544062   AI946511   AI947103   AQ025548   AW944425   AY069814 AAL39959   BE978732   BF485556   BF487291   BF488649   BF488970   BF489289   BF490338   BF490965   BF491152   BF492247   BF493320   BF494828   BF498028   BF498130   BF502607   BF503126   BF504905   BG633189   BG635022   BI168637   BI169979   BI173202   BI213965   BI234704   BI237544   BI361423   BI375333   BI485470   BI565970   BI566168   BI566351   BI567265   BI567421   BI567827   BI569504   BI569915   BI574536   BI575472   BI581247   BI582673   BI583060   BI583136   BI583575   BI586119   BI586978   BI587110   BI588103   BI588641   BI589061   BI589349   BI590312   BI592645   BI604408   BI605127   BI605335   BI607315   BI608172   BI608300   BI608399   BI609005   BI612263   BI616149   BI616427   BI617372   BI618139   BI619710   BI621150   BI621439   BI623321   BI623699   BI624660   BI628679   BI629546   BI629865   BI630396   BI630872   BI634140   BI634445   BI637385   BP554456   BP554457   BT031172   CA806624   CK131982   CK131984   CK657150   CK661107   CK661235   CK662297   CL527959   CO155329   CO181282   CO186069   CO190006   CO191059   CO268651   CO271267   CO271754   CO272615   CO272796   CO273148   CO277362   CO289063   CO292800   CO294332   CO302409   CO316699   CO323148   CO336051   CO337648   CO344337   CZ471561   CZ471562   CZ477591   CZ477592   CZ483647   CZ484823   CZ484824   EC058115   EC059367   EC063190   EC064336   EC068183   EC068817   EC070971   EC080836   EC082982   EC083327   EC197786   EC206241   EC208455   EC214696   EC219718   EC224318   EC224445   EC235612   EC240160   EC243800   EC247968   EC249876   EC252572   EC259660   EC263212   EC264744   EC266144   EV577391   EV578951   EV581331   EV581496   EV582747   EV583093   EV588165   EV593784   EV593889
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q7KV27 Q8T9D5 Q9VYD9
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 5 of adulthood & male -- day 7 of adulthood & male   spermatozoon   (Dorus et al., 2006) day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0030478    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0030478 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 and 18-24 hour embryonic stages, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0030478 expression level Developmental Stage   Expression Level embryo 00-02hr    4580 embryo 02-04hr    523 embryo 04-06hr    454 embryo 06-08hr    1004 embryo 08-10hr    1234 embryo 10-12hr    1344 embryo 12-14hr    1048 embryo 14-16hr    1977 embryo 16-18hr    2796 embryo 18-20hr    4257 embryo 20-22hr    6982 embryo 22-24hr    7287 larva L1    8286 larva L2    7937 larva L3 12hr old    7969 larva L3 puffstage 1-2    5869 larva L3 puffstage 3-6    4220 larva L3 puffstage 7-9    3373 white prepupae new    4280 white prepupae 12hr    4811 white prepupae 24hr    3336 pupae 2d postWPP    3235 pupae 3d postWPP    3901 pupae 4d postWPP    9095 adult male 01day    9524 adult male 05day    7926 adult male 30day    6613 adult female 01day    7425 adult female 05day    6041 adult female 30day    5753 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4580) embryo 02-04hr  (523) embryo 04-06hr  (454) embryo 06-08hr  (1004) embryo 08-10hr  (1234) embryo 10-12hr  (1344) embryo 12-14hr  (1048) embryo 14-16hr  (1977) embryo 16-18hr  (2796) embryo 18-20hr  (4257) embryo 20-22hr  (6982) embryo 22-24hr  (7287) larva L1  (8286) larva L2  (7937) larva L3 12hr old  (7969) larva L3 puffstage 1-2  (5869) larva L3 puffstage 3-6  (4220) larva L3 puffstage 7-9  (3373) white prepupae new  (4280) white prepupae 12hr  (4811) white prepupae 24hr  (3336) pupae 2d postWPP  (3235) pupae 3d postWPP  (3901) pupae 4d postWPP  (9095) adult male 01day  (9524) adult male 05day  (7926) adult male 30day  (6613) adult female 01day  (7425) adult female 05day  (6041) adult female 30day  (5753) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4580) embryo 02-04hr    523 embryo 04-06hr    454 embryo 06-08hr    1004 embryo 08-10hr    1234 embryo 10-12hr    1344 embryo 12-14hr    1048 embryo 14-16hr  (1977) embryo 16-18hr  (2796) embryo 18-20hr  (4257) embryo 20-22hr  (6982) embryo 22-24hr  (7287) larva L1  (8286) larva L2  (7937) larva L3 12hr old  (7969) larva L3 puffstage 1-2  (5869) larva L3 puffstage 3-6  (4220) larva L3 puffstage 7-9  (3373) white prepupae new  (4280) white prepupae 12hr  (4811) white prepupae 24hr  (3336) pupae 2d postWPP  (3235) pupae 3d postWPP  (3901) pupae 4d postWPP  (9095) adult male 01day  (9524) adult male 05day  (7926) adult male 30day  (6613) adult female 01day  (7425) adult female 05day  (6041) adult female 30day  (5753) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4580 embryo 02-04hr    523 embryo 04-06hr    454 embryo 06-08hr    1004 embryo 08-10hr    1234 embryo 10-12hr    1344 embryo 12-14hr    1048 embryo 14-16hr    1977 embryo 16-18hr    2796 embryo 18-20hr    4257 embryo 20-22hr    6982 embryo 22-24hr    7287 larva L1    8286 larva L2    7937 larva L3 12hr old    7969 larva L3 puffstage 1-2    5869 larva L3 puffstage 3-6    4220 larva L3 puffstage 7-9    3373 white prepupae new    4280 white prepupae 12hr    4811 white prepupae 24hr    3336 pupae 2d postWPP    3235 pupae 3d postWPP    3901 pupae 4d postWPP    9095 adult male 01day    9524 adult male 05day    7926 adult male 30day    6613 adult female 01day    7425 adult female 05day    6041 adult female 30day    5753 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4580 embryo 02-04hr    523 embryo 04-06hr    454 embryo 06-08hr    1004 embryo 08-10hr    1234 embryo 10-12hr    1344 embryo 12-14hr    1048 embryo 14-16hr    1977 embryo 16-18hr    2796 embryo 18-20hr    4257 embryo 20-22hr    6982 embryo 22-24hr    7287 larva L1    8286 larva L2    7937 larva L3 12hr old    7969 larva L3 puffstage 1-2    5869 larva L3 puffstage 3-6    4220 larva L3 puffstage 7-9    3373 white prepupae new    4280 white prepupae 12hr    4811 white prepupae 24hr    3336 pupae 2d postWPP    3235 pupae 3d postWPP    3901 pupae 4d postWPP    9095 adult male 01day    9524 adult male 05day    7926 adult male 30day    6613 adult female 01day    7425 adult female 05day    6041 adult female 30day    5753 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0030478 expression level Developmental Stage   Expression Level embryo 00-02hr    4580 embryo 02-04hr    523 embryo 04-06hr    454 embryo 06-08hr    1004 embryo 08-10hr    1234 embryo 10-12hr    1344 embryo 12-14hr    1048 embryo 14-16hr    1977 embryo 16-18hr    2796 embryo 18-20hr    4257 embryo 20-22hr    6982 embryo 22-24hr    7287 larva L1    8286 larva L2    7937 larva L3 12hr old    7969 larva L3 puffstage 1-2    5869 larva L3 puffstage 3-6    4220 larva L3 puffstage 7-9    3373 white prepupae new    4280 white prepupae 12hr    4811 white prepupae 24hr    3336 pupae 2d postWPP    3235 pupae 3d postWPP    3901 pupae 4d postWPP    9095 adult male 01day    9524 adult male 05day    7926 adult male 30day    6613 adult female 01day    7425 adult female 05day    6041 adult female 30day    5753 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4580) embryo 02-04hr  (523) embryo 04-06hr  (454) embryo 06-08hr  (1004) embryo 08-10hr  (1234) embryo 10-12hr  (1344) embryo 12-14hr  (1048) embryo 14-16hr  (1977) embryo 16-18hr  (2796) embryo 18-20hr  (4257) embryo 20-22hr  (6982) embryo 22-24hr  (7287) larva L1  (8286) larva L2  (7937) larva L3 12hr old  (7969) larva L3 puffstage 1-2  (5869) larva L3 puffstage 3-6  (4220) larva L3 puffstage 7-9  (3373) white prepupae new  (4280) white prepupae 12hr  (4811) white prepupae 24hr  (3336) pupae 2d postWPP  (3235) pupae 3d postWPP  (3901) pupae 4d postWPP  (9095) adult male 01day  (9524) adult male 05day  (7926) adult male 30day  (6613) adult female 01day  (7425) adult female 05day  (6041) adult female 30day  (5753) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4580) embryo 02-04hr    523 embryo 04-06hr    454 embryo 06-08hr    1004 embryo 08-10hr    1234 embryo 10-12hr    1344 embryo 12-14hr    1048 embryo 14-16hr  1977 embryo 16-18hr  (2796) embryo 18-20hr  (4257) embryo 20-22hr  (6982) embryo 22-24hr  (7287) larva L1  (8286) larva L2  (7937) larva L3 12hr old  (7969) larva L3 puffstage 1-2  (5869) larva L3 puffstage 3-6  (4220) larva L3 puffstage 7-9  (3373) white prepupae new  (4280) white prepupae 12hr  (4811) white prepupae 24hr  (3336) pupae 2d postWPP  (3235) pupae 3d postWPP  (3901) pupae 4d postWPP  (9095) adult male 01day  (9524) adult male 05day  (7926) adult male 30day  (6613) adult female 01day  (7425) adult female 05day  (6041) adult female 30day  (5753) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4580 embryo 02-04hr    523 embryo 04-06hr    454 embryo 06-08hr    1004 embryo 08-10hr    1234 embryo 10-12hr    1344 embryo 12-14hr    1048 embryo 14-16hr    1977 embryo 16-18hr    2796 embryo 18-20hr    4257 embryo 20-22hr    6982 embryo 22-24hr    7287 larva L1    8286 larva L2    7937 larva L3 12hr old    7969 larva L3 puffstage 1-2    5869 larva L3 puffstage 3-6    4220 larva L3 puffstage 7-9    3373 white prepupae new    4280 white prepupae 12hr    4811 white prepupae 24hr    3336 pupae 2d postWPP    3235 pupae 3d postWPP    3901 pupae 4d postWPP    9095 adult male 01day    9524 adult male 05day    7926 adult male 30day    6613 adult female 01day    7425 adult female 05day    6041 adult female 30day    5753 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4580 embryo 02-04hr    523 embryo 04-06hr    454 embryo 06-08hr    1004 embryo 08-10hr    1234 embryo 10-12hr    1344 embryo 12-14hr    1048 embryo 14-16hr    1977 embryo 16-18hr    2796 embryo 18-20hr    4257 embryo 20-22hr    6982 embryo 22-24hr    7287 larva L1    8286 larva L2    7937 larva L3 12hr old    7969 larva L3 puffstage 1-2    5869 larva L3 puffstage 3-6    4220 larva L3 puffstage 7-9    3373 white prepupae new    4280 white prepupae 12hr    4811 white prepupae 24hr    3336 pupae 2d postWPP    3235 pupae 3d postWPP    3901 pupae 4d postWPP    9095 adult male 01day    9524 adult male 05day    7926 adult male 30day    6613 adult female 01day    7425 adult female 05day    6041 adult female 30day    5753 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0030478    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0030478 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at high levels. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval fat body, larval salivary gland. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0030478 expression level Tissue   Expression Level Larval Central Nervous System    580.05 Larval Midgut    2172.3 Larval Hindgut    2418 Larval Malpighian Tubules    731.6 Larval Fat Body    209.3 Larval Salivary Gland    495.8 Larval Trachea    927.975 Larval Carcass    1673.4 Adult Head    1506.3 Adult Eye    1739.825 Adult Brain    1455 Adult Thoracic-Abdominal Ganglion    1684 Adult Crop    716.2 Adult Midgut    1743.5 Adult Hindgut    2103.5 Adult Malpighian Tubules    678.1 Adult Fat Body    2625.8 Adult Salivary Gland    1717.5 Adult Heart    1644.1 Adult VirginFemale Spermatheca    2172.5 Adult InseminatedFemale Spermatheca    1945 Adult Ovary    648 Adult Testis    87.5 Adult Male Accessory Gland    681.5 Adult Carcass    1668.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (580.05) Larval Midgut  (2172.3) Larval Hindgut  (2418) Larval Malpighian Tubules  (731.6) Larval Fat Body    209.3 Larval Salivary Gland    495.8 Larval Trachea  (927.975) Larval Carcass  (1673.4) Adult Head  (1506.3) Adult Eye  (1739.825) Adult Brain  (1455) Adult Thoracic-Abdominal Ganglion  (1684) Adult Crop  (716.2) Adult Midgut  (1743.5) Adult Hindgut  (2103.5) Adult Malpighian Tubules  (678.1) Adult Fat Body  (2625.8) Adult Salivary Gland  (1717.5) Adult Heart  (1644.1) Adult VirginFemale Spermatheca  (2172.5) Adult InseminatedFemale Spermatheca  (1945) Adult Ovary  (648) Adult Testis    87.5 Adult Male Accessory Gland  (681.5) Adult Carcass  (1668.7) Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    580.05 Larval Midgut  (2172.3) Larval Hindgut  (2418) Larval Malpighian Tubules    731.6 Larval Fat Body    209.3 Larval Salivary Gland    495.8 Larval Trachea    927.975 Larval Carcass  (1673.4) Adult Head  (1506.3) Adult Eye  (1739.825) Adult Brain  (1455) Adult Thoracic-Abdominal Ganglion  (1684) Adult Crop    716.2 Adult Midgut  (1743.5) Adult Hindgut  (2103.5) Adult Malpighian Tubules    678.1 Adult Fat Body  (2625.8) Adult Salivary Gland  (1717.5) Adult Heart  (1644.1) Adult VirginFemale Spermatheca  (2172.5) Adult InseminatedFemale Spermatheca  (1945) Adult Ovary    648 Adult Testis    87.5 Adult Male Accessory Gland    681.5 Adult Carcass  (1668.7) Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    580.05 Larval Midgut    2172.3 Larval Hindgut    2418 Larval Malpighian Tubules    731.6 Larval Fat Body    209.3 Larval Salivary Gland    495.8 Larval Trachea    927.975 Larval Carcass    1673.4 Adult Head    1506.3 Adult Eye    1739.825 Adult Brain    1455 Adult Thoracic-Abdominal Ganglion    1684 Adult Crop    716.2 Adult Midgut    1743.5 Adult Hindgut    2103.5 Adult Malpighian Tubules    678.1 Adult Fat Body    2625.8 Adult Salivary Gland    1717.5 Adult Heart    1644.1 Adult VirginFemale Spermatheca    2172.5 Adult InseminatedFemale Spermatheca    1945 Adult Ovary    648 Adult Testis    87.5 Adult Male Accessory Gland    681.5 Adult Carcass    1668.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0030478 expression level Tissue   Expression Level Larval Central Nervous System    580.05 Larval Midgut    2172.3 Larval Hindgut    2418 Larval Malpighian Tubules    731.6 Larval Fat Body    209.3 Larval Salivary Gland    495.8 Larval Trachea    927.975 Larval Carcass    1673.4 Adult Head    1506.3 Adult Eye    1739.825 Adult Brain    1455 Adult Thoracic-Abdominal Ganglion    1684 Adult Crop    716.2 Adult Midgut    1743.5 Adult Hindgut    2103.5 Adult Malpighian Tubules    678.1 Adult Fat Body    2625.8 Adult Salivary Gland    1717.5 Adult Heart    1644.1 Adult VirginFemale Spermatheca    2172.5 Adult InseminatedFemale Spermatheca    1945 Adult Ovary    648 Adult Testis    87.5 Adult Male Accessory Gland    681.5 Adult Carcass    1668.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  580.05 Larval Midgut  (2172.3) Larval Hindgut  (2418) Larval Malpighian Tubules  731.6 Larval Fat Body    209.3 Larval Salivary Gland    495.8 Larval Trachea  (927.975) Larval Carcass  (1673.4) Adult Head  (1506.3) Adult Eye  (1739.825) Adult Brain  (1455) Adult Thoracic-Abdominal Ganglion  (1684) Adult Crop  716.2 Adult Midgut  (1743.5) Adult Hindgut  (2103.5) Adult Malpighian Tubules  678.1 Adult Fat Body  (2625.8) Adult Salivary Gland  (1717.5) Adult Heart  (1644.1) Adult VirginFemale Spermatheca  (2172.5) Adult InseminatedFemale Spermatheca  (1945) Adult Ovary  648 Adult Testis    87.5 Adult Male Accessory Gland  681.5 Adult Carcass  (1668.7) Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    580.05 Larval Midgut  (2172.3) Larval Hindgut  (2418) Larval Malpighian Tubules    731.6 Larval Fat Body    209.3 Larval Salivary Gland    495.8 Larval Trachea    927.975 Larval Carcass  1673.4 Adult Head  1506.3 Adult Eye  (1739.825) Adult Brain  1455 Adult Thoracic-Abdominal Ganglion  1684 Adult Crop    716.2 Adult Midgut  (1743.5) Adult Hindgut  (2103.5) Adult Malpighian Tubules    678.1 Adult Fat Body  (2625.8) Adult Salivary Gland  1717.5 Adult Heart  1644.1 Adult VirginFemale Spermatheca  (2172.5) Adult InseminatedFemale Spermatheca  (1945) Adult Ovary    648 Adult Testis    87.5 Adult Male Accessory Gland    681.5 Adult Carcass  1668.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    580.05 Larval Midgut    2172.3 Larval Hindgut    2418 Larval Malpighian Tubules    731.6 Larval Fat Body    209.3 Larval Salivary Gland    495.8 Larval Trachea    927.975 Larval Carcass    1673.4 Adult Head    1506.3 Adult Eye    1739.825 Adult Brain    1455 Adult Thoracic-Abdominal Ganglion    1684 Adult Crop    716.2 Adult Midgut    1743.5 Adult Hindgut    2103.5 Adult Malpighian Tubules    678.1 Adult Fat Body    2625.8 Adult Salivary Gland    1717.5 Adult Heart    1644.1 Adult VirginFemale Spermatheca    2172.5 Adult InseminatedFemale Spermatheca    1945 Adult Ovary    648 Adult Testis    87.5 Adult Male Accessory Gland    681.5 Adult Carcass    1668.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    1506.3   NA  Eye    1739.825   NA  Brain    1455   580.05  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    1684   NA  Crop    716.2   2172.3  Midgut    1743.5   2418  Hindgut    2103.5   731.6  Malpighian Tubules    678.1   209.3  Fat Body    2625.8   495.8  Salivary Gland    1717.5   NA  Heart    1644.1   927.975  Trachea    NA   NA  VirginFemale Spermatheca    2172.5   NA  InseminatedFemale Spermatheca    1945   NA  Ovary    648   NA  Testis    87.5   NA  Male Accessory Gland    681.5   1673.4  Carcass    1668.7 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_10
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030478 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG1640-RB
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG1640EY06928 CG1640G00282 viable, with Scer\GAL4pnr-MD237 CG1640GD9174 Sterility Allele fertile CG1640EY06928 CG1640G00282 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 CG1640GD9174 Phenotype manifest in Allele trichogen cell, with Scer\GAL4pnr-MD237 CG1640GD9174
Classical Alleles ( 13 )
For All Classical Alleles Show
Allele of CG1640 Class Mutagen Stocks Known lesion CG1640G00282 P-element activity 2 Yes CG16405-HA-1858 1 -- CG1640d00378 P-element activity 1 -- CG1640d11167 P-element activity 1 -- CG1640EP1626 P-element activity 1 -- CG1640EY06928 P-element activity 1 -- CG1640f01167 piggyBac transposase 1 -- CG1640f02318 piggyBac transposase 1 -- CG1640NP2509 1 -- CG1640NP3565 1 -- CG1640CPTI002793 piggyBac transposase 0 Yes CG1640CPTI003349 piggyBac transposase 0 Yes CG1640GG01426 0 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG1640 Class Mutagen Stocks Known lesion CG1640GD9174 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes
Aneuploid Aberrations
Disrupted in	Df(1)Exel6245 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD9174} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG1640EP1626 NA P{EPgy2}CG1640EY06928 NA P{Mae-UAS.6.11}CG1640GG01426 NA P{XP}CG1640d00378 NA P{XP}CG1640d11167 NA miscellaneous insertions P{PTT-GC}CG1640G00282 NA P{RS5}CG16405-HA-1858 NA PBac{754.P.FSVS-0}CG1640CPTI002793 NA PBac{754.P.FSVS-0}CG1640CPTI003349 NA PBac{WH}CG1640f01167 NA PBac{WH}CG1640f02318 NA insertion of enhancer trap binary system P{GawB}CG1640NP2509 No P{GawB}CG1640NP3565 No
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
L-alanine:2-oxoglutarate aminotransferase activity inferred from sequence or structural similarity with EMBL:U70732 (FlyBase, 1992-) pyridoxal phosphate binding inferred from electronic annotation with InterPro:IPR004839, InterPro:IPR015421, InterPro:IPR015422 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
biosynthetic process inferred from electronic annotation with InterPro:IPR004839 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG1640 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 58672 DroID - A comprehensive database of gene and protein interactions. • FBgn0030478 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 32292
Orthologs
Genome-wide drosophilid orthologs	Dana\GF19406 Dere\GG17777 Dgri\GH24493 Dmoj\GI15248 Dper\GL18066 Dpse\GA22670 Dsec\GM11628 Dsim\GD17120 Dvir\GJ14820 Dwil\GK17070 Dyak\GE17071
Curated drosophilid orthologs	Dpse\GA14067
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL009872-PA Aedes aegypti (mosquito) AGAP000901-PA Anopheles gambiae (mosquito) XP_392720.2 Apis mellifera (honey bee) XP_001948711.1 Acyrthosiphon pisum (pea aphid) At1g72330.1 Arabidopsis thaliana (wall cress) 20287 Batrachochytrium dendrobatidis (chytrid fungus) 99414 Branchiostoma floridae (lancelet) BGIBMGA011983-PA Bombyx mori (silk worm) ENSBTAP00000003881 Bos taurus (bovine) CAL0004796 Candida albicans (a form of yeast) CN05947 Caenorhabditis brenneri (small nematode) CN27640 Caenorhabditis brenneri (small nematode) CBP01035 Caenorhabditis briggsae (nematode) CE32815 Caenorhabditis elegans (worm) ENSCAFP00000002409 Canis familiaris (dog) CAGL0L12254g Candida glabrata (haploid yeast) ENSCINP00000006906 Ciona intestinalis (sea squirt) JA10838 Caenorhabditis japonica (nematode) CMM066C Cyanidioschyzon merolae (red alga) cn07331 Cryptococcus neoformans (yeast-like fungus) CPIJ014256 Culex pipens (mosquito) CPIJ017506 Culex pipens (mosquito) ENSCPOP00000012324 Cavia porcellus (guinea pig) 127267 Chlamidomonas reinhardtii (green alga) RP01114 Caenorhabditis remanei (nematode) ENSCSAVP00000012524 Ciona savignyi (sedentary tunicate) 162690 Capitella spl (polychaete worm) DDB0232139 Dictyostelium discoideum (amoeba) DEHA2B08382g Debaryomyces Hansenii (yeast) 309150 Daphnia pulex (daphnia) ENSDARP00000016765 Danio rerio (zebra fish) ENSECAP00000007432 Equus caballus (horse) XP_650249 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000003311 Gymnopilus aculeatus (mushroom) ENSGALP00000006600 Gallus gallus (chicken) GL50803_12150 Giardia lamblia (flagellated protozoan) 185412 Hypsipyla robusta (cedar shoot borer) ENSP00000345282 Homo sapiens (human) ISCW013629-PA Ixodes scapularis (deer tick) KLLA0F19162g Kluyveromyces lactis (yeast) 114341 Lottia gigantea (owl limpet) LmjF12.0630 Leishmania major (virus) 31676 Monocosta brevicollis (choanoflagellate) ENSMODP00000016065 Monodelphis domestica (gray opossum) ENSMMUP00000004379 Macaca mulatta (rhesus monkey) ENSMUSP00000034136 Mus musculus (house mouse) 236165 Nematostella vectensis (starlet anemone) XP_001606833.1 Nasonia vitripennis (wasp) ENSOANP00000005582 Ornithorynchus anatinus (platypus) ENSORLP00000022172 Oryzias latipes (japanese killifish) LOC_Os07g42600.1 Oryza sativa (asian rice) PHUM005641-PA Pediculus humanus (human body louse) PP16166 Pristionchus pacificus (nematode) 135465 Physcomitrella patens (moss) ENSPPYP00000008268 Pongo pygmaeus (orangutan) 71911 Phytophthora ramorum (sudden oak death pathogen) 71912 Phytophthora ramorum (sudden oak death pathogen) 108810 Phytophthora sojae (root rot pathogen) 584163 Populus trichocarpa (black cottonwood) ENSPTRP00000013801 Pan troglodytes (chimpanzee) ENSRNOP00000044411 Rattus norvegicus (norway rat) 5052033 Sorghum bicolor (sorghum) YLR089C Saccharomyces cerevisiae (budding yeast) Smp_007760 Schistosoma mansoni (trematode parasite) SPBC582.08 Schizosaccharomyces pombe (fission yeast) 50189 Trichoplax adhaerens (metazoa) XP_971666.2 Tribolium castaneum (red flour beetle) Tc00.1047053506529.420 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053506529.430 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053510889.120 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053510889.140 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000017885 Tetraodon nigroviridis (green spotted pufferfish) 35402 Thalassiosira pseudonana (marine diatom) ENSTRUP00000002222 Takifugu rubripes (pufferfish Takifugu) 3691.m00178 Tetrahymena thermophila (ciliate protozoa) 84843.m00283 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000008471 Xenopus tropicalis (frog) YALI0D06325g Yarrowia lipolytica (nonconventional yeast) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB18238 NV13995 LH22627 ISCW019179 ISCW013629 ISCW002343 FBgn0234554 FBgn0219069 FBgn0202024 FBgn0188690 FBgn0183691 FBgn0166571 JGI_V11_309150 FBgn0244073 FBgn0155669 FBgn0153823 FBgn0137997 FBgn0131949 FBgn0109999 FBgn0096416 CPIJ017506 CPIJ014256 BGIBMGA011983 BGIBMGA011984 ACYPI005880 GB17641 AGAP000901 AAEL009875 AAEL009872 PHUM467330 PHUM470220 GLEAN_12980
Stocks & Reagents
Stocks Listed in FlyBase ( 13 )
Bloomington	11395 w1118 P{EP}CG1640EP1626 6843 w1118 P{PTT-GC}CG1640G00282 16771 y1 w67c23 P{EPgy2}CG1640EY06928
Harvard	- P{XP}CG1640d00378 - P{XP}CG1640d11167 - PBac{WH}CG1640f01167 - PBac{WH}CG1640f02318
Kyoto	110649 P{PTT-GC}CG1640G00282 125436 w1118 P{RS5}CG16405-HA-1858 113344 w* P{GawB}CG1640NP3565 / FM7c
VDRC	v32681 w1118; P{GD9174}v32681 v32680 w1118; P{GD9174}v32680/TM3
	More stocks available...
Genomic Clones ( 1 )
	BACR27O05 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 173 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	AT04676 SD05601
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT01648 AT03584 AT07036 AT12382 AT12495 AT18393 AT19037 AT19589 AT22050 AT24140 AT24652 AT25250 AT26680 AT27607 AT27828 AT29150 AT31473 GH05402 GH06877 GH06977 GH08966 GH09751 GH10116 GH12122 GH20694 GH23653 GH25138 GM13068 GM13894 HL03528 HL04331 LD21467 LD22405 LD31310 LD32126 LD33713 LD34172 LD46086 LP01375 LP06978 LP13127 LP13129 LP20257 LP20515 LP22388 LP23227 RE09465 RE11308 RE15966 RE19630 RE30452 RE33788 RE45630 RE63114 RE68794 RH01590 RH02115 RH03915 RH10390 RH12350 RH12702 RH12888 RH13734 RH18613 RH20956 RH21495 RH21610 RH22224 RH24461 RH25871 RH27223 RH27378 RH29135 RH30028 RH30734 RH31143 RH31771 RH35025 RH35336 RH35568 RH37166 RH37349 RH37801 RH38524 RH38603 RH40682 RH46020 RH46373 RH47681 RH48705 RH50802 RH52451 RH52781 RH55448 RH56026 RH57185 RH58433 RH58792 RH59432 RH60211 RH64256 RH69745 RH70658 RH70922 RH74358 SD05602 SD08974 SD10313 SD19385
Other clones	5136 9608 10058 64314 72186 74430 76457 81520 98934 145592 162242 291823 294143 569487 bs27c04 bs35b05 bs82c05 CK01.15C.F10 CK01.22A.D6 CK01.57D.C12 CK01.62C.H12 CK01.89A.E7 CK01.108A.H9 CK01.110C.H11 CK01.111B.D2 CK01.114A.F1 CK01.168A.G7 Dmel_dig_001044_0716_0959 Dmel_dig_009428_0675_3135 Dmel_dig_011713_0706_1966 Dmel_dig_013216_0684_1648 Dmel_dig_018189_0616_0989 Dmel_dig_019379_0639_1174 Dmel_neb_008215_0696_2094 Dmel_neb_013621_0105_3400 Dmel_neb_014144_0616_2335 EC13951 EC252572 EC259660 EK015555 EK045944 EK050562 EK070020 EK092229 EK102724 EK104519 EK107824 EK108424 EK109825 EK123938 EK184105 EK189830 EK200963 EK206563 EK265656 EN05837 EN11727 EN14963 EP19061 ESG014b.E21_A07 FGM230A02 GH21936
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0030478 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32292
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_132651 NM_167365 NM_167366 NM_167367 NM_167368 NM_167369 RefSeq (Proteins) • NP_572879 NP_727696 NP_727697 NP_727698 NP_727699 NP_727700 DDBJ / EMBL / GenBank • AA697958 AAF48262 AAF48263 AAL39959 AAN09325 AAN09326 AAN09327 AAN09328 AI402673 AI533696 AI946511 AI947103 AQ025548 AW944425 AY069814 CL527959 CZ471561 CZ471562 CZ477591 CZ477592 CZ483647 CZ484823 CZ484824 Entrez Gene - A searchable database of RefSeq genes. • 32292 UniProtKB/TrEMBL • Q7KV27 Q8T9D5 Q9VYD9
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Aminotransferase, class I/classII (IPR004839) Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (IPR015421) Pyridoxal phosphate-dependent transferase, major region, subdomain 2 (IPR015422) Pyridoxal phosphate-dependent transferase, major domain (IPR015424)
Linkouts
	BioGRID - A database of protein and genetic interactions • 58672 DroID - A comprehensive database of gene and protein interactions. • FBgn0030478 DRSC - Results from RNAi screens. • FBgn0030478 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030478 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG1640-RB FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0030478 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32292 InParanoid A subset of ortholog calls from InParanoid. • AAEL009872-PA Aedes aegypti (mosquito) AGAP000901-PA Anopheles gambiae (mosquito) XP_392720.2 Apis mellifera (honey bee) XP_001948711.1 Acyrthosiphon pisum (pea aphid) At1g72330.1 Arabidopsis thaliana (wall cress) 20287 Batrachochytrium dendrobatidis (chytrid fungus) 99414 Branchiostoma floridae (lancelet) BGIBMGA011983-PA Bombyx mori (silk worm) ENSBTAP00000003881 Bos taurus (bovine) CAL0004796 Candida albicans (a form of yeast) CN05947 Caenorhabditis brenneri (small nematode) CN27640 Caenorhabditis brenneri (small nematode) CBP01035 Caenorhabditis briggsae (nematode) CE32815 Caenorhabditis elegans (worm) ENSCAFP00000002409 Canis familiaris (dog) CAGL0L12254g Candida glabrata (haploid yeast) ENSCINP00000006906 Ciona intestinalis (sea squirt) JA10838 Caenorhabditis japonica (nematode) CMM066C Cyanidioschyzon merolae (red alga) cn07331 Cryptococcus neoformans (yeast-like fungus) CPIJ014256 Culex pipens (mosquito) CPIJ017506 Culex pipens (mosquito) ENSCPOP00000012324 Cavia porcellus (guinea pig) 127267 Chlamidomonas reinhardtii (green alga) RP01114 Caenorhabditis remanei (nematode) ENSCSAVP00000012524 Ciona savignyi (sedentary tunicate) 162690 Capitella spl (polychaete worm) DDB0232139 Dictyostelium discoideum (amoeba) DEHA2B08382g Debaryomyces Hansenii (yeast) 309150 Daphnia pulex (daphnia) ENSDARP00000016765 Danio rerio (zebra fish) ENSECAP00000007432 Equus caballus (horse) XP_650249 Entamoeba histolytica (anaerobic protozoan) ENSGACP00000003311 Gymnopilus aculeatus (mushroom) ENSGALP00000006600 Gallus gallus (chicken) GL50803_12150 Giardia lamblia (flagellated protozoan) 185412 Hypsipyla robusta (cedar shoot borer) ENSP00000345282 Homo sapiens (human) ISCW013629-PA Ixodes scapularis (deer tick) KLLA0F19162g Kluyveromyces lactis (yeast) 114341 Lottia gigantea (owl limpet) LmjF12.0630 Leishmania major (virus) 31676 Monocosta brevicollis (choanoflagellate) ENSMODP00000016065 Monodelphis domestica (gray opossum) ENSMMUP00000004379 Macaca mulatta (rhesus monkey) ENSMUSP00000034136 Mus musculus (house mouse) 236165 Nematostella vectensis (starlet anemone) XP_001606833.1 Nasonia vitripennis (wasp) ENSOANP00000005582 Ornithorynchus anatinus (platypus) ENSORLP00000022172 Oryzias latipes (japanese killifish) LOC_Os07g42600.1 Oryza sativa (asian rice) PHUM005641-PA Pediculus humanus (human body louse) PP16166 Pristionchus pacificus (nematode) 135465 Physcomitrella patens (moss) ENSPPYP00000008268 Pongo pygmaeus (orangutan) 71911 Phytophthora ramorum (sudden oak death pathogen) 71912 Phytophthora ramorum (sudden oak death pathogen) 108810 Phytophthora sojae (root rot pathogen) 584163 Populus trichocarpa (black cottonwood) ENSPTRP00000013801 Pan troglodytes (chimpanzee) ENSRNOP00000044411 Rattus norvegicus (norway rat) 5052033 Sorghum bicolor (sorghum) YLR089C Saccharomyces cerevisiae (budding yeast) Smp_007760 Schistosoma mansoni (trematode parasite) SPBC582.08 Schizosaccharomyces pombe (fission yeast) 50189 Trichoplax adhaerens (metazoa) XP_971666.2 Tribolium castaneum (red flour beetle) Tc00.1047053506529.420 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053506529.430 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053510889.120 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053510889.140 Trypanosoma cruzi (parasitic trypanosome) ENSTNIP00000017885 Tetraodon nigroviridis (green spotted pufferfish) 35402 Thalassiosira pseudonana (marine diatom) ENSTRUP00000002222 Takifugu rubripes (pufferfish Takifugu) 3691.m00178 Tetrahymena thermophila (ciliate protozoa) 84843.m00283 Trichomonas vaginalis (parasitic flagellated protozoan) ENSXETP00000008471 Xenopus tropicalis (frog) YALI0D06325g Yarrowia lipolytica (nonconventional yeast) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 32292 modMine - Data generated by the modENCODE project. • FBgn0030478 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB18238 NV13995 LH22627 ISCW019179 ISCW013629 ISCW002343 FBgn0234554 FBgn0219069 FBgn0202024 FBgn0188690 FBgn0183691 FBgn0166571 JGI_V11_309150 FBgn0244073 FBgn0155669 FBgn0153823 FBgn0137997 FBgn0131949 FBgn0109999 FBgn0096416 CPIJ017506 CPIJ014256 BGIBMGA011983 BGIBMGA011984 ACYPI005880 GB17641 AGAP000901 AAEL009875 AAEL009872 PHUM467330 PHUM470220 GLEAN_12980
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG1640 (Legube et al., 2006, Quinones-Coello, 2007, Gan et al., 2010, Dorus et al., 2006, Cammarato et al., 2011)
Name Synonym
Secondary FlyBase IDs
References ( 25 )
Generate a list of	All references relating to this gene ( 25 )
List References by type	Research paper  ( 4 ) Supplementary material  ( 7 ) Personal communication to FlyBase  ( 7 ) FlyBase analysis  ( 2 ) Computer file  ( 3 ) Curated genome annotation  ( 1 )
Recent research papers ( 1 )
	Gan et al., 2010, Cell Res. 20(7): 763--783 Dynamic regulation of alternative splicing and chromatin structure in Drosophila gonads revealed by RNA-seq. [FBrf0211191] Show all research papers ...