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Gene Dmel\CG9413

General Information
Symbol	Dmel\CG9413	Species	D. melanogaster
Name		Annotation symbol	CG9413
Feature type	protein_coding_gene	FlyBase ID	FBgn0030574
Gene Model Status	Current	Stock availability	9 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	12F1-12F1	Sequence location	X:14,478,766..14,496,613 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG9413 (FBgn0030574). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: amino acid transmembrane transporter activity. Based on sequence similarity, it is predicted to be involved in the biological process: amino acid transmembrane transport. 11 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Amino acid/polyamine transporter I. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the larval period, during late pupal stages, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult central nervous system, adult crop, larval midgut, larval/adult hindgut, adult salivary gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval central nervous system, adult midgut, adult heart, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1634200_a_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of CG9413. Gene sequence location is X:14478766..14496613.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 12F1-12F1   Limits computationally determined from genome sequence between P{EP}EP1599 and P{EP}EP334&P{EP}EP977
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG9413 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG9413-RA FBtr0073943  NM_132738   3302   532 CG9413-RB FBtr0073944  NM_167411   3452   541
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG9413-PA   FBpp0073760   57.6   532   8.20     NP_572966   AAF48379 CG9413-PB   FBpp0073761   58.7   541   8.51     NP_727785   AAN09339
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Amino acid/polyamine transporter I (IPR002293)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014298 AAF48379   AE014298 AAN09339   AI293916   BI165362   BI171226   BI362154   BI373777   BI375887   BI484282   BI573993   BI585198   BI604299   BI604644   BI605448   BI607462   BI609115   BI609445   BI610891   BI612193   BI617468   BI625173   BI626496   BI630027   BI631547   BT021215 AAX33363   BT100005   CL526087   CO179157   CO188374   CO188443   CO263103   CO267015   CO273088   CO286625   CO295019   CO296555   CO297035   CO303587   CO323959   CO340846   CZ468640   CZ474072   CZ475147   EC060422   EC061450   EC068597   EC069839   EC070722   EC087037   EC194467   EC201719   EC201834   EC223743   EC242648   EC249029   EL881644   EL881726   EV576609   EV598493   GH748033   GH758097   GH773981   GH827860
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8IR48 Q9VY26 Q5BIK9
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
northern blot Stage Tissue/Position (including subcellular localization) Reference adult stage   adult head   (Romero-Calderon et al., 2007) adult thorax | faint   (Romero-Calderon et al., 2007) Comment:Thorax and abdomen assayed together. adult abdomen | faint   (Romero-Calderon et al., 2007) Comment:Thorax and abdomen assayed together.
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult central nervous system, adult crop, larval midgut, larval/adult hindgut, adult salivary gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval central nervous system, adult midgut, adult heart, adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    420.4 Larval Midgut    578.7 Larval Hindgut    1370.9 Larval Malpighian Tubules    23.3 Larval Fat Body    7.5 Larval Salivary Gland    12.1 Larval Trachea    20.9 Larval Carcass    810.225 Adult Head    372.3 Adult Eye    223.425 Adult Brain    545.6 Adult Thoracic-Abdominal Ganglion    721.6 Adult Crop    570.4 Adult Midgut    142.2 Adult Hindgut    1585 Adult Malpighian Tubules    16.6 Adult Fat Body    30.6 Adult Salivary Gland    626.1 Adult Heart    100.525 Adult VirginFemale Spermatheca    88.8 Adult InseminatedFemale Spermatheca    56.8 Adult Ovary    14.6 Adult Testis    41.6 Adult Male Accessory Gland    38 Adult Carcass    180.6 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    420.4 Larval Midgut  (578.7) Larval Hindgut  (1370.9) Larval Malpighian Tubules    23.3 Larval Fat Body    7.5 Larval Salivary Gland    12.1 Larval Trachea    20.9 Larval Carcass  (810.225) Adult Head    372.3 Adult Eye    223.425 Adult Brain  (545.6) Adult Thoracic-Abdominal Ganglion  (721.6) Adult Crop  (570.4) Adult Midgut    142.2 Adult Hindgut  (1585) Adult Malpighian Tubules    16.6 Adult Fat Body    30.6 Adult Salivary Gland  (626.1) Adult Heart    100.525 Adult VirginFemale Spermatheca    88.8 Adult InseminatedFemale Spermatheca    56.8 Adult Ovary    14.6 Adult Testis    41.6 Adult Male Accessory Gland    38 Adult Carcass    180.6 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    420.4 Larval Midgut    578.7 Larval Hindgut  (1370.9) Larval Malpighian Tubules    23.3 Larval Fat Body    7.5 Larval Salivary Gland    12.1 Larval Trachea    20.9 Larval Carcass    810.225 Adult Head    372.3 Adult Eye    223.425 Adult Brain    545.6 Adult Thoracic-Abdominal Ganglion    721.6 Adult Crop    570.4 Adult Midgut    142.2 Adult Hindgut  (1585) Adult Malpighian Tubules    16.6 Adult Fat Body    30.6 Adult Salivary Gland    626.1 Adult Heart    100.525 Adult VirginFemale Spermatheca    88.8 Adult InseminatedFemale Spermatheca    56.8 Adult Ovary    14.6 Adult Testis    41.6 Adult Male Accessory Gland    38 Adult Carcass    180.6 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    420.4 Larval Midgut    578.7 Larval Hindgut    1370.9 Larval Malpighian Tubules    23.3 Larval Fat Body    7.5 Larval Salivary Gland    12.1 Larval Trachea    20.9 Larval Carcass    810.225 Adult Head    372.3 Adult Eye    223.425 Adult Brain    545.6 Adult Thoracic-Abdominal Ganglion    721.6 Adult Crop    570.4 Adult Midgut    142.2 Adult Hindgut    1585 Adult Malpighian Tubules    16.6 Adult Fat Body    30.6 Adult Salivary Gland    626.1 Adult Heart    100.525 Adult VirginFemale Spermatheca    88.8 Adult InseminatedFemale Spermatheca    56.8 Adult Ovary    14.6 Adult Testis    41.6 Adult Male Accessory Gland    38 Adult Carcass    180.6 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    420.4 Larval Midgut    578.7 Larval Hindgut    1370.9 Larval Malpighian Tubules    23.3 Larval Fat Body    7.5 Larval Salivary Gland    12.1 Larval Trachea    20.9 Larval Carcass    810.225 Adult Head    372.3 Adult Eye    223.425 Adult Brain    545.6 Adult Thoracic-Abdominal Ganglion    721.6 Adult Crop    570.4 Adult Midgut    142.2 Adult Hindgut    1585 Adult Malpighian Tubules    16.6 Adult Fat Body    30.6 Adult Salivary Gland    626.1 Adult Heart    100.525 Adult VirginFemale Spermatheca    88.8 Adult InseminatedFemale Spermatheca    56.8 Adult Ovary    14.6 Adult Testis    41.6 Adult Male Accessory Gland    38 Adult Carcass    180.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    420.4 Larval Midgut  578.7 Larval Hindgut  (1370.9) Larval Malpighian Tubules    23.3 Larval Fat Body    7.5 Larval Salivary Gland    12.1 Larval Trachea    20.9 Larval Carcass  810.225 Adult Head    372.3 Adult Eye    223.425 Adult Brain  545.6 Adult Thoracic-Abdominal Ganglion  721.6 Adult Crop  570.4 Adult Midgut    142.2 Adult Hindgut  (1585) Adult Malpighian Tubules    16.6 Adult Fat Body    30.6 Adult Salivary Gland  626.1 Adult Heart    100.525 Adult VirginFemale Spermatheca    88.8 Adult InseminatedFemale Spermatheca    56.8 Adult Ovary    14.6 Adult Testis    41.6 Adult Male Accessory Gland    38 Adult Carcass    180.6 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    420.4 Larval Midgut    578.7 Larval Hindgut  1370.9 Larval Malpighian Tubules    23.3 Larval Fat Body    7.5 Larval Salivary Gland    12.1 Larval Trachea    20.9 Larval Carcass    810.225 Adult Head    372.3 Adult Eye    223.425 Adult Brain    545.6 Adult Thoracic-Abdominal Ganglion    721.6 Adult Crop    570.4 Adult Midgut    142.2 Adult Hindgut  1585 Adult Malpighian Tubules    16.6 Adult Fat Body    30.6 Adult Salivary Gland    626.1 Adult Heart    100.525 Adult VirginFemale Spermatheca    88.8 Adult InseminatedFemale Spermatheca    56.8 Adult Ovary    14.6 Adult Testis    41.6 Adult Male Accessory Gland    38 Adult Carcass    180.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    420.4 Larval Midgut    578.7 Larval Hindgut    1370.9 Larval Malpighian Tubules    23.3 Larval Fat Body    7.5 Larval Salivary Gland    12.1 Larval Trachea    20.9 Larval Carcass    810.225 Adult Head    372.3 Adult Eye    223.425 Adult Brain    545.6 Adult Thoracic-Abdominal Ganglion    721.6 Adult Crop    570.4 Adult Midgut    142.2 Adult Hindgut    1585 Adult Malpighian Tubules    16.6 Adult Fat Body    30.6 Adult Salivary Gland    626.1 Adult Heart    100.525 Adult VirginFemale Spermatheca    88.8 Adult InseminatedFemale Spermatheca    56.8 Adult Ovary    14.6 Adult Testis    41.6 Adult Male Accessory Gland    38 Adult Carcass    180.6 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    372.3   NA  Eye    223.425   NA  Brain    545.6   420.4  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    721.6   NA  Crop    570.4   578.7  Midgut    142.2   1370.9  Hindgut    1585   23.3  Malpighian Tubules    no informative data   7.5  Fat Body    30.6   no informative data  Salivary Gland    626.1   NA  Heart    100.525   20.9  Trachea    NA   NA  VirginFemale Spermatheca    88.8   NA  InseminatedFemale Spermatheca    56.8   NA  Ovary    14.6   NA  Testis    41.6   NA  Male Accessory Gland    38   810.225  Carcass    180.6 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    5 central nervous system, larvae L3    19 central nervous system, pupae P8    17 head, virgin 1-day female    30 head, virgin 4-day female    24 head, virgin 20-day female    19 head, mated 1-day female    25 head, mated 4-day female    22 head, mated 20-day female    15 head, mated 1-day male    39 head, mated 4-day male    38 head, mated 20-day male    32 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    21 digestive system, 1-day adult    14 digestive system, 4-day adult    17 digestive system, 20-day adult    18 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    23 carcass, 1-day adult    19 carcass, 4-day adult    20 carcass, 20-day adult    13 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    5 central nervous system, larvae L3    19 central nervous system, pupae P8    17 head, virgin 1-day female  (30) head, virgin 4-day female    24 head, virgin 20-day female    19 head, mated 1-day female    25 head, mated 4-day female    22 head, mated 20-day female    15 head, mated 1-day male  (39) head, mated 4-day male  (38) head, mated 20-day male  (32) salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    21 digestive system, 1-day adult    14 digestive system, 4-day adult    17 digestive system, 20-day adult    18 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    23 carcass, 1-day adult    19 carcass, 4-day adult    20 carcass, 20-day adult    13 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    5 central nervous system, larvae L3    19 central nervous system, pupae P8    17 head, virgin 1-day female    30 head, virgin 4-day female    24 head, virgin 20-day female    19 head, mated 1-day female    25 head, mated 4-day female    22 head, mated 20-day female    15 head, mated 1-day male    39 head, mated 4-day male    38 head, mated 20-day male    32 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    21 digestive system, 1-day adult    14 digestive system, 4-day adult    17 digestive system, 20-day adult    18 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    23 carcass, 1-day adult    19 carcass, 4-day adult    20 carcass, 20-day adult    13 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    5 central nervous system, larvae L3    19 central nervous system, pupae P8    17 head, virgin 1-day female    30 head, virgin 4-day female    24 head, virgin 20-day female    19 head, mated 1-day female    25 head, mated 4-day female    22 head, mated 20-day female    15 head, mated 1-day male    39 head, mated 4-day male    38 head, mated 20-day male    32 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    21 digestive system, 1-day adult    14 digestive system, 4-day adult    17 digestive system, 20-day adult    18 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    23 carcass, 1-day adult    19 carcass, 4-day adult    20 carcass, 20-day adult    13 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    5 central nervous system, larvae L3    19 central nervous system, pupae P8    17 head, virgin 1-day female    30 head, virgin 4-day female    24 head, virgin 20-day female    19 head, mated 1-day female    25 head, mated 4-day female    22 head, mated 20-day female    15 head, mated 1-day male    39 head, mated 4-day male    38 head, mated 20-day male    32 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    21 digestive system, 1-day adult    14 digestive system, 4-day adult    17 digestive system, 20-day adult    18 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    23 carcass, 1-day adult    19 carcass, 4-day adult    20 carcass, 20-day adult    13 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    5 central nervous system, larvae L3    19 central nervous system, pupae P8    17 head, virgin 1-day female  30 head, virgin 4-day female    24 head, virgin 20-day female    19 head, mated 1-day female    25 head, mated 4-day female    22 head, mated 20-day female    15 head, mated 1-day male  (39) head, mated 4-day male  (38) head, mated 20-day male  32 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    21 digestive system, 1-day adult    14 digestive system, 4-day adult    17 digestive system, 20-day adult    18 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    23 carcass, 1-day adult    19 carcass, 4-day adult    20 carcass, 20-day adult    13 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    5 central nervous system, larvae L3    19 central nervous system, pupae P8    17 head, virgin 1-day female    30 head, virgin 4-day female    24 head, virgin 20-day female    19 head, mated 1-day female    25 head, mated 4-day female    22 head, mated 20-day female    15 head, mated 1-day male    39 head, mated 4-day male    38 head, mated 20-day male    32 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    21 digestive system, 1-day adult    14 digestive system, 4-day adult    17 digestive system, 20-day adult    18 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    23 carcass, 1-day adult    19 carcass, 4-day adult    20 carcass, 20-day adult    13 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    5 central nervous system, larvae L3    19 central nervous system, pupae P8    17 head, virgin 1-day female    30 head, virgin 4-day female    24 head, virgin 20-day female    19 head, mated 1-day female    25 head, mated 4-day female    22 head, mated 20-day female    15 head, mated 1-day male    39 head, mated 4-day male    38 head, mated 20-day male    32 salivary gland, larvae L3 wandering    1 salivary gland, white prepupae    0 digestive system, larvae L3 wandering    21 digestive system, 1-day adult    14 digestive system, 4-day adult    17 digestive system, 20-day adult    18 fat body, larvae L3 wandering    0 fat body, white prepupae    0 fat body, pupae P8    0 carcass, larvae L3 wandering    23 carcass, 1-day adult    19 carcass, 4-day adult    20 carcass, 20-day adult    13 ovary, virgin 4-day female    1 ovary, mated 4-day female    1 testis, mated 4-day male    2 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, at stages throughout the larval period, during late pupal stages, in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    16 embryo 16-18hr    30 embryo 18-20hr    30 embryo 20-22hr    18 embryo 22-24hr    21 larva L1    30 larva L2    25 larva L3 12hr old    21 larva L3 puffstage 1-2    27 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    26 white prepupae new    6 white prepupae 12hr    5 white prepupae 24hr    3 pupae 2d postWPP    5 pupae 3d postWPP    20 pupae 4d postWPP    17 adult male 01day    23 adult male 05day    26 adult male 30day    23 adult female 01day    18 adult female 05day    8 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    16 embryo 16-18hr  (30) embryo 18-20hr  (30) embryo 20-22hr    18 embryo 22-24hr    21 larva L1  (30) larva L2    25 larva L3 12hr old    21 larva L3 puffstage 1-2  (27) larva L3 puffstage 3-6  (37) larva L3 puffstage 7-9  26 white prepupae new    6 white prepupae 12hr    5 white prepupae 24hr    3 pupae 2d postWPP    5 pupae 3d postWPP    20 pupae 4d postWPP    17 adult male 01day    23 adult male 05day  26 adult male 30day    23 adult female 01day    18 adult female 05day    8 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    16 embryo 16-18hr    30 embryo 18-20hr    30 embryo 20-22hr    18 embryo 22-24hr    21 larva L1    30 larva L2    25 larva L3 12hr old    21 larva L3 puffstage 1-2    27 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    26 white prepupae new    6 white prepupae 12hr    5 white prepupae 24hr    3 pupae 2d postWPP    5 pupae 3d postWPP    20 pupae 4d postWPP    17 adult male 01day    23 adult male 05day    26 adult male 30day    23 adult female 01day    18 adult female 05day    8 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    16 embryo 16-18hr    30 embryo 18-20hr    30 embryo 20-22hr    18 embryo 22-24hr    21 larva L1    30 larva L2    25 larva L3 12hr old    21 larva L3 puffstage 1-2    27 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    26 white prepupae new    6 white prepupae 12hr    5 white prepupae 24hr    3 pupae 2d postWPP    5 pupae 3d postWPP    20 pupae 4d postWPP    17 adult male 01day    23 adult male 05day    26 adult male 30day    23 adult female 01day    18 adult female 05day    8 adult female 30day    8 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    16 embryo 16-18hr    30 embryo 18-20hr    30 embryo 20-22hr    18 embryo 22-24hr    21 larva L1    30 larva L2    25 larva L3 12hr old    21 larva L3 puffstage 1-2    27 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    26 white prepupae new    6 white prepupae 12hr    5 white prepupae 24hr    3 pupae 2d postWPP    5 pupae 3d postWPP    20 pupae 4d postWPP    17 adult male 01day    23 adult male 05day    26 adult male 30day    23 adult female 01day    18 adult female 05day    8 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    16 embryo 16-18hr  30 embryo 18-20hr  30 embryo 20-22hr    18 embryo 22-24hr    21 larva L1  30 larva L2    25 larva L3 12hr old    21 larva L3 puffstage 1-2  27 larva L3 puffstage 3-6  (37) larva L3 puffstage 7-9  26 white prepupae new    6 white prepupae 12hr    5 white prepupae 24hr    3 pupae 2d postWPP    5 pupae 3d postWPP    20 pupae 4d postWPP    17 adult male 01day    23 adult male 05day  26 adult male 30day    23 adult female 01day    18 adult female 05day    8 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    16 embryo 16-18hr    30 embryo 18-20hr    30 embryo 20-22hr    18 embryo 22-24hr    21 larva L1    30 larva L2    25 larva L3 12hr old    21 larva L3 puffstage 1-2    27 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    26 white prepupae new    6 white prepupae 12hr    5 white prepupae 24hr    3 pupae 2d postWPP    5 pupae 3d postWPP    20 pupae 4d postWPP    17 adult male 01day    23 adult male 05day    26 adult male 30day    23 adult female 01day    18 adult female 05day    8 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    0 embryo 02-04hr    0 embryo 04-06hr    0 embryo 06-08hr    0 embryo 08-10hr    0 embryo 10-12hr    1 embryo 12-14hr    2 embryo 14-16hr    16 embryo 16-18hr    30 embryo 18-20hr    30 embryo 20-22hr    18 embryo 22-24hr    21 larva L1    30 larva L2    25 larva L3 12hr old    21 larva L3 puffstage 1-2    27 larva L3 puffstage 3-6    37 larva L3 puffstage 7-9    26 white prepupae new    6 white prepupae 12hr    5 white prepupae 24hr    3 pupae 2d postWPP    5 pupae 3d postWPP    20 pupae 4d postWPP    17 adult male 01day    23 adult male 05day    26 adult male 30day    23 adult female 01day    18 adult female 05day    8 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    2 embryonic 1182-4H    0 embryonic GM2    1 embryonic Kc167    1 embryonic S1    1 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    6 CNS ML-DmBG1-c1    3 CNS ML-DmBG2-c2    3 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    2 embryonic 1182-4H    0 embryonic GM2    1 embryonic Kc167    1 embryonic S1    1 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    6 CNS ML-DmBG1-c1    3 CNS ML-DmBG2-c2    3 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    2 embryonic 1182-4H    0 embryonic GM2    1 embryonic Kc167    1 embryonic S1    1 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    6 CNS ML-DmBG1-c1    3 CNS ML-DmBG2-c2    3 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    2 embryonic 1182-4H    0 embryonic GM2    1 embryonic Kc167    1 embryonic S1    1 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    6 CNS ML-DmBG1-c1    3 CNS ML-DmBG2-c2    3 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    2 embryonic 1182-4H    0 embryonic GM2    1 embryonic Kc167    1 embryonic S1    1 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    6 CNS ML-DmBG1-c1    3 CNS ML-DmBG2-c2    3 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    2 embryonic 1182-4H    0 embryonic GM2    1 embryonic Kc167    1 embryonic S1    1 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    6 CNS ML-DmBG1-c1    3 CNS ML-DmBG2-c2    3 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    2 embryonic 1182-4H    0 embryonic GM2    1 embryonic Kc167    1 embryonic S1    1 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    6 CNS ML-DmBG1-c1    3 CNS ML-DmBG2-c2    3 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    2 Schneider line 2 Sg4    2 embryonic 1182-4H    0 embryonic GM2    1 embryonic Kc167    1 embryonic S1    1 embryonic S3    1 leg disc CME L1    1 wing disc CME-W2    1 wing disc ML-DmD8    0 wing disc ML-DmD9    0 wing disc ML-DmD16-c3    0 wing disc ML-DmD21    0 wing disc ML-DmD32    0 haltere disc ML-DmD17-c3    0 eye-antennal disc ML-DmD11    0 antennal disc ML-DmD20-c5    1 mixed discs ML-DmD4-c1    6 CNS ML-DmBG1-c1    3 CNS ML-DmBG2-c2    3 tumorous blood cells mbn2    0 ovary fGS/OSS    0 ovary OSC    0 ovary OSS    0 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    4 cold shock, 4-day adult    4 heat shock, 4-day adult    14 Cadmium 50 mM 6 hrs, larvae L3    22 Cadmium 50 mM 12 hrs, larvae L3    27 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    7 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    6 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    6 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    9 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    22 Rotenone 8 μg 12 hrs, larvae L3    17 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    4 cold shock, 4-day adult    4 heat shock, 4-day adult    14 Cadmium 50 mM 6 hrs, larvae L3    22 Cadmium 50 mM 12 hrs, larvae L3  (27) Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    7 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    6 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    6 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    9 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    22 Rotenone 8 μg 12 hrs, larvae L3    17 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    4 cold shock, 4-day adult    4 heat shock, 4-day adult    14 Cadmium 50 mM 6 hrs, larvae L3    22 Cadmium 50 mM 12 hrs, larvae L3    27 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    7 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    6 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    6 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    9 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    22 Rotenone 8 μg 12 hrs, larvae L3    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    4 cold shock, 4-day adult    4 heat shock, 4-day adult    14 Cadmium 50 mM 6 hrs, larvae L3    22 Cadmium 50 mM 12 hrs, larvae L3    27 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    7 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    6 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    6 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    9 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    22 Rotenone 8 μg 12 hrs, larvae L3    17 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    4 cold shock, 4-day adult    4 heat shock, 4-day adult    14 Cadmium 50 mM 6 hrs, larvae L3    22 Cadmium 50 mM 12 hrs, larvae L3    27 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    7 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    6 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    6 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    9 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    22 Rotenone 8 μg 12 hrs, larvae L3    17 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    4 cold shock, 4-day adult    4 heat shock, 4-day adult    14 Cadmium 50 mM 6 hrs, larvae L3    22 Cadmium 50 mM 12 hrs, larvae L3  27 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    7 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    6 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    6 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    9 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    22 Rotenone 8 μg 12 hrs, larvae L3    17 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    4 cold shock, 4-day adult    4 heat shock, 4-day adult    14 Cadmium 50 mM 6 hrs, larvae L3    22 Cadmium 50 mM 12 hrs, larvae L3    27 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    7 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    6 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    6 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    9 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    22 Rotenone 8 μg 12 hrs, larvae L3    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    4 cold shock, 4-day adult    4 heat shock, 4-day adult    14 Cadmium 50 mM 6 hrs, larvae L3    22 Cadmium 50 mM 12 hrs, larvae L3    27 Cadmium 50 mM 48 hrs, 4-day adult    17 Cadmium 100 mM 48 hrs, 4-day adult    7 Copper 0.5 mM 12 hrs, larvae L3    19 Copper 15 mM 48 hrs, 4-day adult    11 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    6 Ethanol 5% 3 hrs, larvae L3    16 Ethanol 10% 3 hrs, larvae L3    17 Caffeine 1.5 mg/ml 4 hrs, larvae L3    19 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    6 Caffeine 25 mg/ml 48 hrs, 4-day adult    5 Paraquat 5 mM 48 hrs, 4-day adult    9 Paraquat 10 mM 48 hrs, 4-day adult    11 Rotenone 2 μg 12 hrs, larvae L3    22 Rotenone 8 μg 12 hrs, larvae L3    17 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_18 mE1_20_mRNA_expression_cluster_16
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030574 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9413-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | recessive CG9413PL5 viable CG9413EY09200 viable, with Scer\GAL4pnr-MD237 CG9413GD3355 Sterility Allele fertile CG9413EY09200 Phenotype manifest in Allele
Classical Alleles ( 9 )
For All Classical Alleles Show
Allele of CG9413 Class Mutagen Stocks Known lesion CG9413c03391 piggyBac transposase 1 -- CG9413d04694 P-element activity 1 -- CG9413d06466 P-element activity 1 -- CG9413EY09200 P-element activity 1 -- CG9413KG04428 1 -- CG9413BG00922 P-element activity 0 -- CG9413GG01815 0 -- CG9413PL5 Delta2-3 0 -- CG9413pogo128 natural population 0 Yes
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG9413 Class Mutagen Stocks Known lesion CG9413GD3355 in vitro construct - RNAi in vitro construct - regulatory fusion 4 Yes CG9413KK101306 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD3355} NA P{KK101306} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{GT1}CG9413BG00922 NA P{SUPor-P}CG9413KG04428 NA PBac{PB}CG9413c03391 NA insertion of mobile activating element P{EPgy2}CG9413EY09200 NA P{Mae-UAS.6.11}CG9413GG01815 NA P{XP}CG9413d04694 NA P{XP}CG9413d06466 NA insertion of enhancer trap P{lacW}CG9413PL5 No
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
amino acid transmembrane transporter activity inferred from sequence or structural similarity with EMBL:Y12716 (FlyBase, 1992-) inferred from sequence or structural similarity with Eaat1 (Romero-Calderon et al., 2007)
Biological Process
CV term Evidence References
amino acid transmembrane transport inferred from sequence or structural similarity with Eaat1 (Romero-Calderon et al., 2007)
Cellular Component
CV term Evidence References
membrane inferred from electronic annotation with InterPro:IPR002293, InterPro:IPR004841 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	gene_with_edited_transcript (Graveley et al., 2011) nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG9413 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0030574
Orthologs
OrthoDB Orthologs (117) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6HT9BV Dipteran inclusive ortholog search EOG66T38T Insect inclusive ortholog search EOG669PQ1 Arthropod inclusive ortholog search EOG6XGXF9 Metazoa inclusive ortholog search EOG6KHFNF
Orthologs in Drosophila Species (EOG6HT9BV)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG9413     Drosophila simulans   Dsim\GD15847 Y   Drosophila sechellia   Dsec\GM17545 Y   Drosophila erecta   Dere\GG19454 Y   Drosophila yakuba   Dyak\GE16110 Y   Drosophila ananassae   Dana\GF22383 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA21769 Y   Drosophila persimilis   Dper\GL20417 Y   Drosophila willistoni   Dwil\GK18491 Y   Drosophila virilis   Dvir\GJ19085 Y   Drosophila mojavensis   Dmoj\GI14010     Drosophila grimshawi   Dgri\GH12784 Y
Orthologs in non-Drosophila Dipterans (EOG66T38T)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL003387   Anopheles gambiae Malaria mosquito  Agam\AGAP001870   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ008928
Orthologs in non-Dipteran Insects (EOG669PQ1)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB46541   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG012657   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH20289   Atta cephalotes Leafcutter ant  Acep\ACEP23813   Camponotus floridanus Florida carpenter ant  Cflo\CFLO23034   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL20504   Linepithema humile Argentine ant  Lhum\LH13732   Pogonomyrmex barbatus Red harvester ant  Pbar\PB18549   Solenopsis invicta Red fire ant  Sinv\SINV17565   Acyrthosiphon pisum Pea aphid  Apim\ACYPI006356   Pediculus humanus Human body louse  Phum\PHUM212700   Tribolium castaneum Red flour beetle  Tcas\TC000583
Orthologs in non-Insect Arthropods (EOG6XGXF9)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\MECP2   Ixodes scapularis Deer tick  Isca\ISCW022258
Orthologs in non-Arthropod Metazoa (EOG6KHFNF)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\aat-2 Y Caenorhabditis elegans Nematode  Cele\T11F9.4 Y Caenorhabditis elegans Nematode  Cele\aat-3 Y Caenorhabditis elegans Nematode  Cele\aat-8 Y Caenorhabditis elegans Nematode  Cele\aat-1 Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_016082gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_011434gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_026696gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_011041gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_004503gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_027797gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_004504gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_016924gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_023311gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_008804gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_007985gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_002429gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_028004gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_020155gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_005290gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_008803gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_013361gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_027794gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_009252gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_004210gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_015946gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_025952gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_027799gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_004506gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_013231gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_004209gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_013944gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_026694gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_017342gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_009609gn Y Danio rerio Zebrafish  Drer\slc7a6 Y Danio rerio Zebrafish  Drer\slc7a7 Y Danio rerio Zebrafish  Drer\CU367845.1 Y Danio rerio Zebrafish  Drer\slc7a9 Y Danio rerio Zebrafish  Drer\ENSDARG00000054343 Y Danio rerio Zebrafish  Drer\ENSDARG00000040610 Y Danio rerio Zebrafish  Drer\si:dkeyp-120h9.1 Y Danio rerio Zebrafish  Drer\si:ch211-14a17.3 Y Danio rerio Zebrafish  Drer\ENSDARG00000089192 Y Danio rerio Zebrafish  Drer\ENSDARG00000051730 Y Danio rerio Zebrafish  Drer\ENSDARG00000051887 Y Danio rerio Zebrafish  Drer\CU367845.1 Y Danio rerio Zebrafish  Drer\ENSDARG00000008100 Y Xenopus tropicalis Western clawed frog  Xtro\ENSXETG00000014619 Y Xenopus tropicalis Western clawed frog  Xtro\slc7a15 Y Xenopus tropicalis Western clawed frog  Xtro\slc7a11 Y Xenopus tropicalis Western clawed frog  Xtro\slc7a6 Y Xenopus tropicalis Western clawed frog  Xtro\slc7a5 Y Xenopus tropicalis Western clawed frog  Xtro\slc7a7 Y Xenopus tropicalis Western clawed frog  Xtro\slc7a9 Y Xenopus tropicalis Western clawed frog  Xtro\slc7a10 Y Xenopus tropicalis Western clawed frog  Xtro\slc7a8 Y Xenopus tropicalis Western clawed frog  Xtro\ENSXETG00000024735 Y Gallus gallus Domestic chicken  Ggal\SLC7A11 Y Gallus gallus Domestic chicken  Ggal\SLC7A7 Y Gallus gallus Domestic chicken  Ggal\SLC7A5 Y Gallus gallus Domestic chicken  Ggal\SLC7A10 Y Gallus gallus Domestic chicken  Ggal\SLC7A6 Y Gallus gallus Domestic chicken  Ggal\LOC421965 Y Gallus gallus Domestic chicken  Ggal\SLC7A9 Y Gallus gallus Domestic chicken  Ggal\LOC418109 Y Mus musculus House mouse  Mmus\Slc7a6 Y Mus musculus House mouse  Mmus\Slc7a7 Y Mus musculus House mouse  Mmus\Slc7a9 Y Mus musculus House mouse  Mmus\Slc7a5 Y Mus musculus House mouse  Mmus\Slc7a8 Y Mus musculus House mouse  Mmus\Slc7a15 Y Mus musculus House mouse  Mmus\Slc7a11 Y Rattus norvegicus Norway rat  Rnor\Slc7a8 Y Rattus norvegicus Norway rat  Rnor\Slc7a5 Y Rattus norvegicus Norway rat  Rnor\Slc7a10 Y Rattus norvegicus Norway rat  Rnor\Slc7a6 Y Rattus norvegicus Norway rat  Rnor\Slc7a11 Y Rattus norvegicus Norway rat  Rnor\Slc7a7 Y Rattus norvegicus Norway rat  Rnor\Slc7a15 Y Rattus norvegicus Norway rat  Rnor\Slc7a9 Y Homo sapiens Human  Hsap\SLC7A7 Y Homo sapiens Human  Hsap\SLC7A5 Y Homo sapiens Human  Hsap\ENSG00000151012 Y Homo sapiens Human  Hsap\SLC7A9 Y Homo sapiens Human  Hsap\SLC7A10 Y Homo sapiens Human  Hsap\SLC7A8 Y Homo sapiens Human  Hsap\SLC7A6 Y
Human Orthologs (7)
Gene OMIM HGNC Hsap\SLC7A7     Hsap\SLC7A5     Hsap\ENSG00000151012     Hsap\SLC7A9     Hsap\SLC7A10     Hsap\SLC7A8     Hsap\SLC7A6
AAA Orthologs (10) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD15847 Drosophila sechellia Dsec\GM17545 Drosophila erecta Dere\GG19454 Drosophila yakuba Dyak\GE16110 Drosophila ananassae Dana\GF22383 Drosophila pseudoobscura pseudoobscura Dpse\GA21769 Drosophila persimilis Dper\GL20417 Drosophila willistoni Dwil\GK18491 Drosophila virilis Dvir\GJ19085 Drosophila grimshawi Dgri\GH12784
Stocks & Reagents
Stocks Listed in FlyBase ( 9 )
Bloomington	13596 y1 P{SUPor-P}CG9413KG04428 17541 y1 w67c23 P{EPgy2}CG9413EY09200
Harvard	- P{XP}CG9413d04694 - P{XP}CG9413d06466 - PBac{PB}CG9413c03391
VDRC	v5566 w1118 P{GD3355}v5566 v45178 w1118; P{GD3355}v45178 v45180 w1118; P{GD3355}v45180 v45181 w1118; P{GD3355}v45181/CyO
Genomic Clones ( 2 )
	BACR22I24 BACR33F13 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 56 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE43767 RH65810
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	LP07175 RE05242 RE12945 RE46643 RE61186 RE63788 RE67361 RH13859 RH14229 RH16885 RH24693 RH40593 RH47816 RH58981 RH61137 RH65189 RH67455 RH69612 RH70076 RH71055 RH74537
Other clones	9769 33902 65410 78651 80683 82189 122247 CK01.6A.E6 CK01.19A.C11 CK01.74C.H9 CK01.104B.F8 Dmel_dig_011029_0708_0507 Dmel_neb_015554_0926_2604 EK039423 EK040218 EK058629 EK063405 EK087456 EK109454 EK148347 EK192039 EK208158 EK213960 EK215761 EK242155 EP11441 IP11444 IP11544 RH09428 RP003015777 RP003119022 RP003297237 RP003327266
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0030574 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32397
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	Nonsense-mediated mRNA decay (NMD) down-regulates a distinct splice isoform(s) of this gene. (Hansen et al., 2009)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_132738 NM_167411 RefSeq (Proteins) • NP_572966 NP_727785 DDBJ / EMBL / GenBank • AAF48379 AAN09339 AAX33363 AI293916 BT021215 CL526087 CZ468640 CZ474072 CZ475147 Entrez Gene - A searchable database of RefSeq genes. • 32397 UniProtKB/TrEMBL • Q5BIK9 Q8IR48 Q9VY26
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Amino acid/polyamine transporter I (IPR002293)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0030574 DRSC - Results from RNAi screens. • FBgn0030574 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030574 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9413-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0030574 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32397 modMine - Data generated by the modENCODE project. • FBgn0030574
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG9413 (Augustin et al., 2007, Romero-Calderon et al., 2007, González et al., 2008, Brandt et al., 2008, Reynolds et al., 2009, Hansen et al., 2009, Keleman et al., 2009.8.5, González et al., 2010, Azad et al., 2012)
Name Synonym
Secondary FlyBase IDs
References ( 24 )
Generate a list of	All references relating to this gene ( 24 )
List References by type	Research paper  ( 9 ) Supplementary material  ( 4 ) Personal communication to FlyBase  ( 6 ) FlyBase analysis  ( 3 ) Curated genome annotation  ( 2 )
Recent research papers ( 1 )
	Azad et al., 2012, G3 (Bethesda) 2(10): 1169--1178 Identification of Genes Underlying Hypoxia Tolerance in Drosophila by a P-element Screen. [FBrf0219647] Show all research papers ...