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Gene Dmel\CG15890

General Information
Symbol	Dmel\CG15890	Species	D. melanogaster
Name		Annotation symbol	CG15890
Feature type	protein_coding_gene	FlyBase ID	FBgn0030576
Gene Model Status	Current	Stock availability	10 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	12F4-12F4	Sequence location	X:14,651,560..14,659,820 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG15890 (FBgn0030576). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: transmembrane transport. 8 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Major facilitator superfamily; Major facilitator superfamily domain, general substrate transporter. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 06-12 and 18-24 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval hindgut, larval Malpighian tubules, adult salivary gland, adult spermathecae. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval central nervous system, adult crop, larval salivary gland. Comments on Affy2 ProbeSet: ProbeSet 1626901_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG15890. Gene sequence location is X:14651560..14659820.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA19737 BKN25797
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 12F4-12F4   Limits computationally determined from genome sequence between P{EP}EP1599 and P{EP}EP334&P{EP}EP977
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG15890 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG15890-RA FBtr0073939  NM_132740   2709   599
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG15890-PA   FBpp0073756   66.5   599   7.49     NP_572968   AAF48383
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Major facilitator superfamily (IPR011701) Major facilitator superfamily domain, general substrate transporter (IPR016196)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014298 AAF48383   BI169992   BI362184   BI368077   BI486670   BI577258   BI579563   BI580760   BT011024   CO322221   CZ469769   CZ469770   CZ471273   CZ482456   EC085965   EV598100
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VY22
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0030576    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0030576 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 06-12 and 18-24 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0030576 expression level Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    12 embryo 04-06hr    31 embryo 06-08hr    409 embryo 08-10hr    894 embryo 10-12hr    1822 embryo 12-14hr    1053 embryo 14-16hr    947 embryo 16-18hr    1228 embryo 18-20hr    1470 embryo 20-22hr    665 embryo 22-24hr    834 larva L1    572 larva L2    1085 larva L3 12hr old    928 larva L3 puffstage 1-2    302 larva L3 puffstage 3-6    445 larva L3 puffstage 7-9    587 white prepupae new    389 white prepupae 12hr    1025 white prepupae 24hr    74 pupae 2d postWPP    132 pupae 3d postWPP    461 pupae 4d postWPP    346 adult male 01day    307 adult male 05day    246 adult male 30day    228 adult female 01day    353 adult female 05day    217 adult female 30day    205 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    12 embryo 04-06hr    31 embryo 06-08hr  (409) embryo 08-10hr  (894) embryo 10-12hr  (1822) embryo 12-14hr  (1053) embryo 14-16hr  (947) embryo 16-18hr  (1228) embryo 18-20hr  (1470) embryo 20-22hr  (665) embryo 22-24hr  (834) larva L1  (572) larva L2  (1085) larva L3 12hr old  (928) larva L3 puffstage 1-2  (302) larva L3 puffstage 3-6  (445) larva L3 puffstage 7-9  (587) white prepupae new  (389) white prepupae 12hr  (1025) white prepupae 24hr    74 pupae 2d postWPP  (132) pupae 3d postWPP  (461) pupae 4d postWPP  (346) adult male 01day  (307) adult male 05day  (246) adult male 30day  (228) adult female 01day  (353) adult female 05day  (217) adult female 30day  (205) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    12 embryo 04-06hr    31 embryo 06-08hr    409 embryo 08-10hr    894 embryo 10-12hr  (1822) embryo 12-14hr    1053 embryo 14-16hr    947 embryo 16-18hr    1228 embryo 18-20hr  1470 embryo 20-22hr    665 embryo 22-24hr    834 larva L1    572 larva L2    1085 larva L3 12hr old    928 larva L3 puffstage 1-2    302 larva L3 puffstage 3-6    445 larva L3 puffstage 7-9    587 white prepupae new    389 white prepupae 12hr    1025 white prepupae 24hr    74 pupae 2d postWPP    132 pupae 3d postWPP    461 pupae 4d postWPP    346 adult male 01day    307 adult male 05day    246 adult male 30day    228 adult female 01day    353 adult female 05day    217 adult female 30day    205 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    12 embryo 04-06hr    31 embryo 06-08hr    409 embryo 08-10hr    894 embryo 10-12hr    1822 embryo 12-14hr    1053 embryo 14-16hr    947 embryo 16-18hr    1228 embryo 18-20hr    1470 embryo 20-22hr    665 embryo 22-24hr    834 larva L1    572 larva L2    1085 larva L3 12hr old    928 larva L3 puffstage 1-2    302 larva L3 puffstage 3-6    445 larva L3 puffstage 7-9    587 white prepupae new    389 white prepupae 12hr    1025 white prepupae 24hr    74 pupae 2d postWPP    132 pupae 3d postWPP    461 pupae 4d postWPP    346 adult male 01day    307 adult male 05day    246 adult male 30day    228 adult female 01day    353 adult female 05day    217 adult female 30day    205 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    12 embryo 04-06hr    31 embryo 06-08hr    409 embryo 08-10hr    894 embryo 10-12hr    1822 embryo 12-14hr    1053 embryo 14-16hr    947 embryo 16-18hr    1228 embryo 18-20hr    1470 embryo 20-22hr    665 embryo 22-24hr    834 larva L1    572 larva L2    1085 larva L3 12hr old    928 larva L3 puffstage 1-2    302 larva L3 puffstage 3-6    445 larva L3 puffstage 7-9    587 white prepupae new    389 white prepupae 12hr    1025 white prepupae 24hr    74 pupae 2d postWPP    132 pupae 3d postWPP    461 pupae 4d postWPP    346 adult male 01day    307 adult male 05day    246 adult male 30day    228 adult female 01day    353 adult female 05day    217 adult female 30day    205 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0030576 expression level Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    12 embryo 04-06hr    31 embryo 06-08hr    409 embryo 08-10hr    894 embryo 10-12hr    1822 embryo 12-14hr    1053 embryo 14-16hr    947 embryo 16-18hr    1228 embryo 18-20hr    1470 embryo 20-22hr    665 embryo 22-24hr    834 larva L1    572 larva L2    1085 larva L3 12hr old    928 larva L3 puffstage 1-2    302 larva L3 puffstage 3-6    445 larva L3 puffstage 7-9    587 white prepupae new    389 white prepupae 12hr    1025 white prepupae 24hr    74 pupae 2d postWPP    132 pupae 3d postWPP    461 pupae 4d postWPP    346 adult male 01day    307 adult male 05day    246 adult male 30day    228 adult female 01day    353 adult female 05day    217 adult female 30day    205 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    12 embryo 04-06hr    31 embryo 06-08hr  (409) embryo 08-10hr  (894) embryo 10-12hr  (1822) embryo 12-14hr  (1053) embryo 14-16hr  (947) embryo 16-18hr  (1228) embryo 18-20hr  (1470) embryo 20-22hr  (665) embryo 22-24hr  (834) larva L1  (572) larva L2  (1085) larva L3 12hr old  (928) larva L3 puffstage 1-2  (302) larva L3 puffstage 3-6  (445) larva L3 puffstage 7-9  (587) white prepupae new  (389) white prepupae 12hr  (1025) white prepupae 24hr    74 pupae 2d postWPP  132 pupae 3d postWPP  (461) pupae 4d postWPP  (346) adult male 01day  (307) adult male 05day  (246) adult male 30day  (228) adult female 01day  (353) adult female 05day  (217) adult female 30day  (205) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    12 embryo 04-06hr    31 embryo 06-08hr    409 embryo 08-10hr    894 embryo 10-12hr  1822 embryo 12-14hr    1053 embryo 14-16hr    947 embryo 16-18hr    1228 embryo 18-20hr  1470 embryo 20-22hr    665 embryo 22-24hr    834 larva L1    572 larva L2    1085 larva L3 12hr old    928 larva L3 puffstage 1-2    302 larva L3 puffstage 3-6    445 larva L3 puffstage 7-9    587 white prepupae new    389 white prepupae 12hr    1025 white prepupae 24hr    74 pupae 2d postWPP    132 pupae 3d postWPP    461 pupae 4d postWPP    346 adult male 01day    307 adult male 05day    246 adult male 30day    228 adult female 01day    353 adult female 05day    217 adult female 30day    205 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    12 embryo 04-06hr    31 embryo 06-08hr    409 embryo 08-10hr    894 embryo 10-12hr    1822 embryo 12-14hr    1053 embryo 14-16hr    947 embryo 16-18hr    1228 embryo 18-20hr    1470 embryo 20-22hr    665 embryo 22-24hr    834 larva L1    572 larva L2    1085 larva L3 12hr old    928 larva L3 puffstage 1-2    302 larva L3 puffstage 3-6    445 larva L3 puffstage 7-9    587 white prepupae new    389 white prepupae 12hr    1025 white prepupae 24hr    74 pupae 2d postWPP    132 pupae 3d postWPP    461 pupae 4d postWPP    346 adult male 01day    307 adult male 05day    246 adult male 30day    228 adult female 01day    353 adult female 05day    217 adult female 30day    205 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4 embryo 02-04hr    12 embryo 04-06hr    31 embryo 06-08hr    409 embryo 08-10hr    894 embryo 10-12hr    1822 embryo 12-14hr    1053 embryo 14-16hr    947 embryo 16-18hr    1228 embryo 18-20hr    1470 embryo 20-22hr    665 embryo 22-24hr    834 larva L1    572 larva L2    1085 larva L3 12hr old    928 larva L3 puffstage 1-2    302 larva L3 puffstage 3-6    445 larva L3 puffstage 7-9    587 white prepupae new    389 white prepupae 12hr    1025 white prepupae 24hr    74 pupae 2d postWPP    132 pupae 3d postWPP    461 pupae 4d postWPP    346 adult male 01day    307 adult male 05day    246 adult male 30day    228 adult female 01day    353 adult female 05day    217 adult female 30day    205 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0030576    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0030576 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval hindgut, larval Malpighian tubules, adult salivary gland, adult spermathecae. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval central nervous system, adult crop, larval salivary gland. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0030576 expression level Tissue   Expression Level Larval Central Nervous System    113.925 Larval Midgut    79.4 Larval Hindgut    875.8 Larval Malpighian Tubules    565.8 Larval Fat Body    6.5 Larval Salivary Gland    466.6 Larval Trachea    5.825 Larval Carcass    19.775 Adult Head    246.9 Adult Eye    98.075 Adult Brain    86 Adult Thoracic-Abdominal Ganglion    62.2 Adult Crop    433.8 Adult Midgut    8.8 Adult Hindgut    22 Adult Malpighian Tubules no informative data Adult Fat Body    11.2 Adult Salivary Gland    1016.4 Adult Heart    3.175 Adult VirginFemale Spermatheca    684.5 Adult InseminatedFemale Spermatheca    890.4 Adult Ovary    19.2 Adult Testis    22.6 Adult Male Accessory Gland    5.5 Adult Carcass    28.8 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    113.925 Larval Midgut    79.4 Larval Hindgut  (875.8) Larval Malpighian Tubules  (565.8) Larval Fat Body    6.5 Larval Salivary Gland    466.6 Larval Trachea    5.825 Larval Carcass    19.775 Adult Head    246.9 Adult Eye    98.075 Adult Brain    86 Adult Thoracic-Abdominal Ganglion    62.2 Adult Crop    433.8 Adult Midgut    8.8 Adult Hindgut    22 Adult Malpighian Tubules no informative data Adult Fat Body    11.2 Adult Salivary Gland  (1016.4) Adult Heart    3.175 Adult VirginFemale Spermatheca  (684.5) Adult InseminatedFemale Spermatheca  (890.4) Adult Ovary    19.2 Adult Testis    22.6 Adult Male Accessory Gland    5.5 Adult Carcass    28.8 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    113.925 Larval Midgut    79.4 Larval Hindgut    875.8 Larval Malpighian Tubules    565.8 Larval Fat Body    6.5 Larval Salivary Gland    466.6 Larval Trachea    5.825 Larval Carcass    19.775 Adult Head    246.9 Adult Eye    98.075 Adult Brain    86 Adult Thoracic-Abdominal Ganglion    62.2 Adult Crop    433.8 Adult Midgut    8.8 Adult Hindgut    22 Adult Malpighian Tubules no informative data Adult Fat Body    11.2 Adult Salivary Gland  1016.4 Adult Heart    3.175 Adult VirginFemale Spermatheca    684.5 Adult InseminatedFemale Spermatheca    890.4 Adult Ovary    19.2 Adult Testis    22.6 Adult Male Accessory Gland    5.5 Adult Carcass    28.8 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    113.925 Larval Midgut    79.4 Larval Hindgut    875.8 Larval Malpighian Tubules    565.8 Larval Fat Body    6.5 Larval Salivary Gland    466.6 Larval Trachea    5.825 Larval Carcass    19.775 Adult Head    246.9 Adult Eye    98.075 Adult Brain    86 Adult Thoracic-Abdominal Ganglion    62.2 Adult Crop    433.8 Adult Midgut    8.8 Adult Hindgut    22 Adult Malpighian Tubules no informative data Adult Fat Body    11.2 Adult Salivary Gland    1016.4 Adult Heart    3.175 Adult VirginFemale Spermatheca    684.5 Adult InseminatedFemale Spermatheca    890.4 Adult Ovary    19.2 Adult Testis    22.6 Adult Male Accessory Gland    5.5 Adult Carcass    28.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0030576 expression level Tissue   Expression Level Larval Central Nervous System    113.925 Larval Midgut    79.4 Larval Hindgut    875.8 Larval Malpighian Tubules    565.8 Larval Fat Body    6.5 Larval Salivary Gland    466.6 Larval Trachea    5.825 Larval Carcass    19.775 Adult Head    246.9 Adult Eye    98.075 Adult Brain    86 Adult Thoracic-Abdominal Ganglion    62.2 Adult Crop    433.8 Adult Midgut    8.8 Adult Hindgut    22 Adult Malpighian Tubules no informative data Adult Fat Body    11.2 Adult Salivary Gland    1016.4 Adult Heart    3.175 Adult VirginFemale Spermatheca    684.5 Adult InseminatedFemale Spermatheca    890.4 Adult Ovary    19.2 Adult Testis    22.6 Adult Male Accessory Gland    5.5 Adult Carcass    28.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    113.925 Larval Midgut    79.4 Larval Hindgut  (875.8) Larval Malpighian Tubules  565.8 Larval Fat Body    6.5 Larval Salivary Gland    466.6 Larval Trachea    5.825 Larval Carcass    19.775 Adult Head    246.9 Adult Eye    98.075 Adult Brain    86 Adult Thoracic-Abdominal Ganglion    62.2 Adult Crop    433.8 Adult Midgut    8.8 Adult Hindgut    22 Adult Malpighian Tubules no informative data Adult Fat Body    11.2 Adult Salivary Gland  (1016.4) Adult Heart    3.175 Adult VirginFemale Spermatheca  684.5 Adult InseminatedFemale Spermatheca  (890.4) Adult Ovary    19.2 Adult Testis    22.6 Adult Male Accessory Gland    5.5 Adult Carcass    28.8 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    113.925 Larval Midgut    79.4 Larval Hindgut    875.8 Larval Malpighian Tubules    565.8 Larval Fat Body    6.5 Larval Salivary Gland    466.6 Larval Trachea    5.825 Larval Carcass    19.775 Adult Head    246.9 Adult Eye    98.075 Adult Brain    86 Adult Thoracic-Abdominal Ganglion    62.2 Adult Crop    433.8 Adult Midgut    8.8 Adult Hindgut    22 Adult Malpighian Tubules no informative data Adult Fat Body    11.2 Adult Salivary Gland  1016.4 Adult Heart    3.175 Adult VirginFemale Spermatheca    684.5 Adult InseminatedFemale Spermatheca    890.4 Adult Ovary    19.2 Adult Testis    22.6 Adult Male Accessory Gland    5.5 Adult Carcass    28.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    113.925 Larval Midgut    79.4 Larval Hindgut    875.8 Larval Malpighian Tubules    565.8 Larval Fat Body    6.5 Larval Salivary Gland    466.6 Larval Trachea    5.825 Larval Carcass    19.775 Adult Head    246.9 Adult Eye    98.075 Adult Brain    86 Adult Thoracic-Abdominal Ganglion    62.2 Adult Crop    433.8 Adult Midgut    8.8 Adult Hindgut    22 Adult Malpighian Tubules no informative data Adult Fat Body    11.2 Adult Salivary Gland    1016.4 Adult Heart    3.175 Adult VirginFemale Spermatheca    684.5 Adult InseminatedFemale Spermatheca    890.4 Adult Ovary    19.2 Adult Testis    22.6 Adult Male Accessory Gland    5.5 Adult Carcass    28.8 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules no informative data Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    246.9   NA  Eye    98.075   NA  Brain    86   113.925  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    62.2   NA  Crop    433.8   79.4  Midgut    8.8   875.8  Hindgut    22   565.8  Malpighian Tubules    no informative data   6.5  Fat Body    11.2   466.6  Salivary Gland    1016.4   NA  Heart    3.175   5.825  Trachea    NA   NA  VirginFemale Spermatheca    684.5   NA  InseminatedFemale Spermatheca    890.4   NA  Ovary    19.2   NA  Testis    22.6   NA  Male Accessory Gland    5.5   19.775  Carcass    28.8 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_29
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030576 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG15890-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG15890c05173 viable, with Scer\GAL4pnr-MD237 CG15890GD3357 Sterility Allele fertile CG15890c05173 Phenotype manifest in Allele
Classical Alleles ( 5 )
For All Classical Alleles Show
Allele of CG15890 Class Mutagen Stocks Known lesion CG15890c05173 piggyBac transposase 2 -- CG15890c07136 piggyBac transposase 1 -- CG15890e04678 piggyBac transposase 1 -- CG15890f03953 1 -- CG15890MB00299 1 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG15890 Class Mutagen Stocks Known lesion CG15890GD3357 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG15890JF03196 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG15890KK105797 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD3357} NA P{KK105797} NA P{TRiP.JF03196} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{PB}CG15890c05173 NA PBac{PB}CG15890c07136 NA PBac{RB}CG15890e04678 NA PBac{WH}CG15890f03953 NA insertion of enhancer trap binary system Mi{ET1}CG15890MB00299 No
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
transmembrane transport inferred from electronic annotation with InterPro:IPR011701 (FlyBase Curators et al., 2004-)
Cellular Component
CV term Evidence References
integral to membrane inferred from electronic annotation with InterPro:IPR011701 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG15890 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0030576 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 32401
Orthologs
Genome-wide drosophilid orthologs	Dana\GF21601 Dere\GG19451 Dgri\GH12216 Dmoj\GI15748 Dper\GL20411 Dpse\GA14008 Dsim\GD15841 Dvir\GJ18608 Dwil\GK18457 Dyak\GE16105
Curated drosophilid orthologs	Dpse\GA14008
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL009314-PA Aedes aegypti (mosquito) AGAP004562-PA Anopheles gambiae (mosquito) XP_001942608.1 Acyrthosiphon pisum (pea aphid) 67379 Branchiostoma floridae (lancelet) XP_001894041.1 Brugia malayi (roundworm nematode) BGIBMGA006540-PA Bombyx mori (silk worm) ENSBTAP00000011448 Bos taurus (bovine) JA09777 Caenorhabditis japonica (nematode) CPIJ004085 Culex pipens (mosquito) 180882 Capitella spl (polychaete worm) 329199 Daphnia pulex (daphnia) 329228 Daphnia pulex (daphnia) ENSECAP00000009259 Equus caballus (horse) ENSGACP00000027204 Gymnopilus aculeatus (mushroom) ENSGALP00000027554 Gallus gallus (chicken) 232543 Lottia gigantea (owl limpet) 11092 Nematostella vectensis (starlet anemone) XP_001604312.1 Nasonia vitripennis (wasp) ENSOANP00000021182 Ornithorynchus anatinus (platypus) PHUM006943-PA Pediculus humanus (human body louse) YJL163C Saccharomyces cerevisiae (budding yeast) XP_001185376.1 Strongylocentrotus purpuratus (purple sea urchin) XP_969712.1 Tribolium castaneum (red flour beetle) ENSTNIP00000012831 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000016676 Takifugu rubripes (pufferfish Takifugu) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV15583 LH17878 FBgn0233652 FBgn0220455 FBgn0205765 FBgn0187497 JGI_V11_329199 JGI_V11_329228 FBgn0074040 FBgn0158006 FBgn0138497 FBgn0119695 FBgn0111654 FBgn0098601 CPIJ004085 BGIBMGA010937 BGIBMGA010938 BGIBMGA010936 BGIBMGA010934 BGIBMGA010935 BGIBMGA010933 BGIBMGA010910 BGIBMGA006540 BGIBMGA001911 BGIBMGA001908 BGIBMGA001907 ACYPI010229 ACYPI010147 ACYPI008517 ACYPI006724 ACYPI006657 ACYPI005918 ACYPI004984 ACYPI004422 ACYPI002542 ACYPI002520 GB13396 AGAP004562 AAEL009314 PB24033 GLEAN_08800 GLEAN_08783 GLEAN_15466
Stocks & Reagents
Stocks Listed in FlyBase ( 10 )
Bloomington	17693 w1118 PBac{PB}CG15890c05173 22759 Mi{ET1}CG15890MB00299 w1118 28768 y1 v1; P{TRiP.JF03196}attP2
Harvard	- PBac{PB}CG15890c05173 - PBac{PB}CG15890c07136 - PBac{RB}CG15890e04678 - PBac{WH}CG15890f03953
VDRC	v107962 P{KK105797}VIE-260B v11536 w1118; P{GD3357}v11536 v11538 w1118; P{GD3357}v11538/CyO
Genomic Clones ( 1 )
	BACR08K05 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 10 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE46682
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	RE11323 RE53987 RE70125 RE70916 RE73617 RE74988
Other clones	62174 Dmel_neb_015765_0840_0560 EK187564
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0030576 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32401
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_132740 RefSeq (Proteins) • NP_572968 DDBJ / EMBL / GenBank • AAF48383 BI362184 CZ469769 CZ469770 CZ471273 CZ482456 Entrez Gene - A searchable database of RefSeq genes. • 32401 UniProtKB/TrEMBL • Q9VY22
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Major facilitator superfamily (IPR011701) Major facilitator superfamily domain, general substrate transporter (IPR016196)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0030576 DRSC - Results from RNAi screens. • FBgn0030576 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030576 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG15890-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0030576 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32401 InParanoid A subset of ortholog calls from InParanoid. • AAEL009314-PA Aedes aegypti (mosquito) AGAP004562-PA Anopheles gambiae (mosquito) XP_001942608.1 Acyrthosiphon pisum (pea aphid) 67379 Branchiostoma floridae (lancelet) XP_001894041.1 Brugia malayi (roundworm nematode) BGIBMGA006540-PA Bombyx mori (silk worm) ENSBTAP00000011448 Bos taurus (bovine) JA09777 Caenorhabditis japonica (nematode) CPIJ004085 Culex pipens (mosquito) 180882 Capitella spl (polychaete worm) 329199 Daphnia pulex (daphnia) 329228 Daphnia pulex (daphnia) ENSECAP00000009259 Equus caballus (horse) ENSGACP00000027204 Gymnopilus aculeatus (mushroom) ENSGALP00000027554 Gallus gallus (chicken) 232543 Lottia gigantea (owl limpet) 11092 Nematostella vectensis (starlet anemone) XP_001604312.1 Nasonia vitripennis (wasp) ENSOANP00000021182 Ornithorynchus anatinus (platypus) PHUM006943-PA Pediculus humanus (human body louse) YJL163C Saccharomyces cerevisiae (budding yeast) XP_001185376.1 Strongylocentrotus purpuratus (purple sea urchin) XP_969712.1 Tribolium castaneum (red flour beetle) ENSTNIP00000012831 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000016676 Takifugu rubripes (pufferfish Takifugu) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 32401 modMine - Data generated by the modENCODE project. • FBgn0030576 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV15583 LH17878 FBgn0233652 FBgn0220455 FBgn0205765 FBgn0187497 JGI_V11_329199 JGI_V11_329228 FBgn0074040 FBgn0158006 FBgn0138497 FBgn0119695 FBgn0111654 FBgn0098601 CPIJ004085 BGIBMGA010937 BGIBMGA010938 BGIBMGA010936 BGIBMGA010934 BGIBMGA010935 BGIBMGA010933 BGIBMGA010910 BGIBMGA006540 BGIBMGA001911 BGIBMGA001908 BGIBMGA001907 ACYPI010229 ACYPI010147 ACYPI008517 ACYPI006724 ACYPI006657 ACYPI005918 ACYPI004984 ACYPI004422 ACYPI002542 ACYPI002520 GB13396 AGAP004562 AAEL009314 PB24033 GLEAN_08800 GLEAN_08783 GLEAN_15466
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG15890 (Keleman et al., 2009.8.5, Perkins et al., 2009)
Name Synonym
Secondary FlyBase IDs
References ( 15 )
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Perkins et al., 2009, Update to TRiP stock collection. Update to TRiP stock collection. [FBrf0208864] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Bellen, 2006.10.10, MB687.correct.xml MB687.correct.xml [FBrf0191803] Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase. Exelixis insertion alleles that are not in FlyBase. [FBrf0179797] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis	FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Curated genome annotation	Ketchum, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126677]