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Gene Dmel\CG7556

General Information
Symbol	Dmel\CG7556	Species	D. melanogaster
Name		Annotation symbol	CG7556
Feature type	protein_coding_gene	FlyBase ID	FBgn0030990
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	18A5-18A5	Sequence location	X:19,071,030..19,073,988 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG7556 (FBgn0030990). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: heat shock protein binding; DNA binding; unfolded protein binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: regulation of transcription, DNA-dependent; protein folding. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Heat shock protein DnaJ; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, conserved site; Homeodomain-like; Homeodomain-related; MYB-like; Myb, DNA-binding; SANT domain, DNA binding; SANT, eukarya. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 06-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult salivary gland, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval trachea, adult female reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1626507_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG7556. Gene sequence location is X:19071030..19073988.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA20052 BKN21817
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 18A5-18A5   Limits computationally determined from genome sequence between P{EP}CG7502EP1326 and P{EP}CG8051EP1550&P{EP}EP1300
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG7556 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG7556-RA FBtr0074697  NM_133126   2130   522
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG7556-PA   FBpp0074466   60.0   522   7.43     NP_573354   AAF48924
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • SANT domain, DNA binding (IPR001005) Heat shock protein DnaJ, N-terminal (IPR001623) Heat shock protein DnaJ (IPR003095) Homeodomain-like (IPR009057) Heat shock protein DnaJ, conserved site (IPR018253) Myb, DNA-binding (IPR014778) MYB-like (IPR017877) SANT, eukarya (IPR017884) Homeodomain-related (IPR012287)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA951289   AE014298 AAF48924   AI108494   AI134158   AI402078   AI517080   AI543191   AY119483 AAM50137   BF486310   BF494540   BG637266   BG640875   BI141793   BI164483   BI173444   BI215070   BI234420   BI235171   BI370733   BI371265   BI374760   BI563439   BI564265   BI574341   BI587928   BI592696   BI610665   BI621356   BI633555   BP556753   BP556754   CK604360   CO264334   CO266330   CO267427   CO268530   CO284252   CO292656   CO304749   CO315901   CO332098   CZ474078   EC067776   EC082501   EC083002   EC083832   EC084482   EC089674   EC203204   EC249765   EL887340   EL887380   EV577405
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VWL4
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0030990    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0030990 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 06-12 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0030990 expression level Developmental Stage   Expression Level embryo 00-02hr    3649 embryo 02-04hr    1017 embryo 04-06hr    2543 embryo 06-08hr    4143 embryo 08-10hr    4044 embryo 10-12hr    5035 embryo 12-14hr    2829 embryo 14-16hr    2439 embryo 16-18hr    2164 embryo 18-20hr    2194 embryo 20-22hr    1741 embryo 22-24hr    1483 larva L1    2023 larva L2    2778 larva L3 12hr old    2589 larva L3 puffstage 1-2    2129 larva L3 puffstage 3-6    2123 larva L3 puffstage 7-9    1883 white prepupae new    1774 white prepupae 12hr    1276 white prepupae 24hr    1492 pupae 2d postWPP    1292 pupae 3d postWPP    1066 pupae 4d postWPP    1012 adult male 01day    1704 adult male 05day    2040 adult male 30day    1769 adult female 01day    2137 adult female 05day    3115 adult female 30day    3608 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (3649) embryo 02-04hr  (1017) embryo 04-06hr  (2543) embryo 06-08hr  (4143) embryo 08-10hr  (4044) embryo 10-12hr  (5035) embryo 12-14hr  (2829) embryo 14-16hr  (2439) embryo 16-18hr  (2164) embryo 18-20hr  (2194) embryo 20-22hr  (1741) embryo 22-24hr  (1483) larva L1  (2023) larva L2  (2778) larva L3 12hr old  (2589) larva L3 puffstage 1-2  (2129) larva L3 puffstage 3-6  (2123) larva L3 puffstage 7-9  (1883) white prepupae new  (1774) white prepupae 12hr  (1276) white prepupae 24hr  (1492) pupae 2d postWPP  (1292) pupae 3d postWPP  (1066) pupae 4d postWPP  (1012) adult male 01day  (1704) adult male 05day  (2040) adult male 30day  (1769) adult female 01day  (2137) adult female 05day  (3115) adult female 30day  (3608) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (3649) embryo 02-04hr    1017 embryo 04-06hr  (2543) embryo 06-08hr  (4143) embryo 08-10hr  (4044) embryo 10-12hr  (5035) embryo 12-14hr  (2829) embryo 14-16hr  (2439) embryo 16-18hr  (2164) embryo 18-20hr  (2194) embryo 20-22hr  (1741) embryo 22-24hr  1483 larva L1  (2023) larva L2  (2778) larva L3 12hr old  (2589) larva L3 puffstage 1-2  (2129) larva L3 puffstage 3-6  (2123) larva L3 puffstage 7-9  (1883) white prepupae new  (1774) white prepupae 12hr    1276 white prepupae 24hr  1492 pupae 2d postWPP    1292 pupae 3d postWPP    1066 pupae 4d postWPP    1012 adult male 01day  (1704) adult male 05day  (2040) adult male 30day  (1769) adult female 01day  (2137) adult female 05day  (3115) adult female 30day  (3608) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    3649 embryo 02-04hr    1017 embryo 04-06hr    2543 embryo 06-08hr    4143 embryo 08-10hr    4044 embryo 10-12hr    5035 embryo 12-14hr    2829 embryo 14-16hr    2439 embryo 16-18hr    2164 embryo 18-20hr    2194 embryo 20-22hr    1741 embryo 22-24hr    1483 larva L1    2023 larva L2    2778 larva L3 12hr old    2589 larva L3 puffstage 1-2    2129 larva L3 puffstage 3-6    2123 larva L3 puffstage 7-9    1883 white prepupae new    1774 white prepupae 12hr    1276 white prepupae 24hr    1492 pupae 2d postWPP    1292 pupae 3d postWPP    1066 pupae 4d postWPP    1012 adult male 01day    1704 adult male 05day    2040 adult male 30day    1769 adult female 01day    2137 adult female 05day    3115 adult female 30day    3608 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    3649 embryo 02-04hr    1017 embryo 04-06hr    2543 embryo 06-08hr    4143 embryo 08-10hr    4044 embryo 10-12hr    5035 embryo 12-14hr    2829 embryo 14-16hr    2439 embryo 16-18hr    2164 embryo 18-20hr    2194 embryo 20-22hr    1741 embryo 22-24hr    1483 larva L1    2023 larva L2    2778 larva L3 12hr old    2589 larva L3 puffstage 1-2    2129 larva L3 puffstage 3-6    2123 larva L3 puffstage 7-9    1883 white prepupae new    1774 white prepupae 12hr    1276 white prepupae 24hr    1492 pupae 2d postWPP    1292 pupae 3d postWPP    1066 pupae 4d postWPP    1012 adult male 01day    1704 adult male 05day    2040 adult male 30day    1769 adult female 01day    2137 adult female 05day    3115 adult female 30day    3608 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0030990 expression level Developmental Stage   Expression Level embryo 00-02hr    3649 embryo 02-04hr    1017 embryo 04-06hr    2543 embryo 06-08hr    4143 embryo 08-10hr    4044 embryo 10-12hr    5035 embryo 12-14hr    2829 embryo 14-16hr    2439 embryo 16-18hr    2164 embryo 18-20hr    2194 embryo 20-22hr    1741 embryo 22-24hr    1483 larva L1    2023 larva L2    2778 larva L3 12hr old    2589 larva L3 puffstage 1-2    2129 larva L3 puffstage 3-6    2123 larva L3 puffstage 7-9    1883 white prepupae new    1774 white prepupae 12hr    1276 white prepupae 24hr    1492 pupae 2d postWPP    1292 pupae 3d postWPP    1066 pupae 4d postWPP    1012 adult male 01day    1704 adult male 05day    2040 adult male 30day    1769 adult female 01day    2137 adult female 05day    3115 adult female 30day    3608 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (3649) embryo 02-04hr  (1017) embryo 04-06hr  (2543) embryo 06-08hr  (4143) embryo 08-10hr  (4044) embryo 10-12hr  (5035) embryo 12-14hr  (2829) embryo 14-16hr  (2439) embryo 16-18hr  (2164) embryo 18-20hr  (2194) embryo 20-22hr  (1741) embryo 22-24hr  (1483) larva L1  (2023) larva L2  (2778) larva L3 12hr old  (2589) larva L3 puffstage 1-2  (2129) larva L3 puffstage 3-6  (2123) larva L3 puffstage 7-9  (1883) white prepupae new  (1774) white prepupae 12hr  (1276) white prepupae 24hr  (1492) pupae 2d postWPP  (1292) pupae 3d postWPP  (1066) pupae 4d postWPP  (1012) adult male 01day  (1704) adult male 05day  (2040) adult male 30day  (1769) adult female 01day  (2137) adult female 05day  (3115) adult female 30day  (3608) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (3649) embryo 02-04hr    1017 embryo 04-06hr  (2543) embryo 06-08hr  (4143) embryo 08-10hr  (4044) embryo 10-12hr  (5035) embryo 12-14hr  (2829) embryo 14-16hr  2439 embryo 16-18hr  2164 embryo 18-20hr  2194 embryo 20-22hr  1741 embryo 22-24hr  1483 larva L1  2023 larva L2  (2778) larva L3 12hr old  (2589) larva L3 puffstage 1-2  2129 larva L3 puffstage 3-6  2123 larva L3 puffstage 7-9  1883 white prepupae new  1774 white prepupae 12hr    1276 white prepupae 24hr  1492 pupae 2d postWPP    1292 pupae 3d postWPP    1066 pupae 4d postWPP    1012 adult male 01day  1704 adult male 05day  2040 adult male 30day  1769 adult female 01day  2137 adult female 05day  (3115) adult female 30day  (3608) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    3649 embryo 02-04hr    1017 embryo 04-06hr    2543 embryo 06-08hr    4143 embryo 08-10hr    4044 embryo 10-12hr    5035 embryo 12-14hr    2829 embryo 14-16hr    2439 embryo 16-18hr    2164 embryo 18-20hr    2194 embryo 20-22hr    1741 embryo 22-24hr    1483 larva L1    2023 larva L2    2778 larva L3 12hr old    2589 larva L3 puffstage 1-2    2129 larva L3 puffstage 3-6    2123 larva L3 puffstage 7-9    1883 white prepupae new    1774 white prepupae 12hr    1276 white prepupae 24hr    1492 pupae 2d postWPP    1292 pupae 3d postWPP    1066 pupae 4d postWPP    1012 adult male 01day    1704 adult male 05day    2040 adult male 30day    1769 adult female 01day    2137 adult female 05day    3115 adult female 30day    3608 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    3649 embryo 02-04hr    1017 embryo 04-06hr    2543 embryo 06-08hr    4143 embryo 08-10hr    4044 embryo 10-12hr    5035 embryo 12-14hr    2829 embryo 14-16hr    2439 embryo 16-18hr    2164 embryo 18-20hr    2194 embryo 20-22hr    1741 embryo 22-24hr    1483 larva L1    2023 larva L2    2778 larva L3 12hr old    2589 larva L3 puffstage 1-2    2129 larva L3 puffstage 3-6    2123 larva L3 puffstage 7-9    1883 white prepupae new    1774 white prepupae 12hr    1276 white prepupae 24hr    1492 pupae 2d postWPP    1292 pupae 3d postWPP    1066 pupae 4d postWPP    1012 adult male 01day    1704 adult male 05day    2040 adult male 30day    1769 adult female 01day    2137 adult female 05day    3115 adult female 30day    3608 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0030990    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0030990 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult salivary gland, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval trachea, adult female reproductive system, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0030990 expression level Tissue   Expression Level Larval Central Nervous System    147.825 Larval Midgut    254.1 Larval Hindgut    236.1 Larval Malpighian Tubules    193.1 Larval Fat Body    180 Larval Salivary Gland    1003.1 Larval Trachea    277.275 Larval Carcass    261.5 Adult Head    181.8 Adult Eye    101.425 Adult Brain    154.4 Adult Thoracic-Abdominal Ganglion    167.6 Adult Crop    245.3 Adult Midgut    306.2 Adult Hindgut    274.8 Adult Malpighian Tubules    206.6 Adult Fat Body    195.2 Adult Salivary Gland    905.4 Adult Heart    217 Adult VirginFemale Spermatheca    288 Adult InseminatedFemale Spermatheca    333.2 Adult Ovary    270.7 Adult Testis    80.9 Adult Male Accessory Gland    1120.2 Adult Carcass    207 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    147.825 Larval Midgut    254.1 Larval Hindgut    236.1 Larval Malpighian Tubules    193.1 Larval Fat Body    180 Larval Salivary Gland  (1003.1) Larval Trachea    277.275 Larval Carcass    261.5 Adult Head    181.8 Adult Eye    101.425 Adult Brain    154.4 Adult Thoracic-Abdominal Ganglion    167.6 Adult Crop    245.3 Adult Midgut    306.2 Adult Hindgut    274.8 Adult Malpighian Tubules    206.6 Adult Fat Body    195.2 Adult Salivary Gland  (905.4) Adult Heart    217 Adult VirginFemale Spermatheca    288 Adult InseminatedFemale Spermatheca    333.2 Adult Ovary    270.7 Adult Testis    80.9 Adult Male Accessory Gland  (1120.2) Adult Carcass    207 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    147.825 Larval Midgut    254.1 Larval Hindgut    236.1 Larval Malpighian Tubules    193.1 Larval Fat Body    180 Larval Salivary Gland  1003.1 Larval Trachea    277.275 Larval Carcass    261.5 Adult Head    181.8 Adult Eye    101.425 Adult Brain    154.4 Adult Thoracic-Abdominal Ganglion    167.6 Adult Crop    245.3 Adult Midgut    306.2 Adult Hindgut    274.8 Adult Malpighian Tubules    206.6 Adult Fat Body    195.2 Adult Salivary Gland    905.4 Adult Heart    217 Adult VirginFemale Spermatheca    288 Adult InseminatedFemale Spermatheca    333.2 Adult Ovary    270.7 Adult Testis    80.9 Adult Male Accessory Gland  (1120.2) Adult Carcass    207 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    147.825 Larval Midgut    254.1 Larval Hindgut    236.1 Larval Malpighian Tubules    193.1 Larval Fat Body    180 Larval Salivary Gland    1003.1 Larval Trachea    277.275 Larval Carcass    261.5 Adult Head    181.8 Adult Eye    101.425 Adult Brain    154.4 Adult Thoracic-Abdominal Ganglion    167.6 Adult Crop    245.3 Adult Midgut    306.2 Adult Hindgut    274.8 Adult Malpighian Tubules    206.6 Adult Fat Body    195.2 Adult Salivary Gland    905.4 Adult Heart    217 Adult VirginFemale Spermatheca    288 Adult InseminatedFemale Spermatheca    333.2 Adult Ovary    270.7 Adult Testis    80.9 Adult Male Accessory Gland    1120.2 Adult Carcass    207 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0030990 expression level Tissue   Expression Level Larval Central Nervous System    147.825 Larval Midgut    254.1 Larval Hindgut    236.1 Larval Malpighian Tubules    193.1 Larval Fat Body    180 Larval Salivary Gland    1003.1 Larval Trachea    277.275 Larval Carcass    261.5 Adult Head    181.8 Adult Eye    101.425 Adult Brain    154.4 Adult Thoracic-Abdominal Ganglion    167.6 Adult Crop    245.3 Adult Midgut    306.2 Adult Hindgut    274.8 Adult Malpighian Tubules    206.6 Adult Fat Body    195.2 Adult Salivary Gland    905.4 Adult Heart    217 Adult VirginFemale Spermatheca    288 Adult InseminatedFemale Spermatheca    333.2 Adult Ovary    270.7 Adult Testis    80.9 Adult Male Accessory Gland    1120.2 Adult Carcass    207 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    147.825 Larval Midgut    254.1 Larval Hindgut    236.1 Larval Malpighian Tubules    193.1 Larval Fat Body    180 Larval Salivary Gland  (1003.1) Larval Trachea    277.275 Larval Carcass    261.5 Adult Head    181.8 Adult Eye    101.425 Adult Brain    154.4 Adult Thoracic-Abdominal Ganglion    167.6 Adult Crop    245.3 Adult Midgut    306.2 Adult Hindgut    274.8 Adult Malpighian Tubules    206.6 Adult Fat Body    195.2 Adult Salivary Gland  (905.4) Adult Heart    217 Adult VirginFemale Spermatheca    288 Adult InseminatedFemale Spermatheca    333.2 Adult Ovary    270.7 Adult Testis    80.9 Adult Male Accessory Gland  (1120.2) Adult Carcass    207 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    147.825 Larval Midgut    254.1 Larval Hindgut    236.1 Larval Malpighian Tubules    193.1 Larval Fat Body    180 Larval Salivary Gland  1003.1 Larval Trachea    277.275 Larval Carcass    261.5 Adult Head    181.8 Adult Eye    101.425 Adult Brain    154.4 Adult Thoracic-Abdominal Ganglion    167.6 Adult Crop    245.3 Adult Midgut    306.2 Adult Hindgut    274.8 Adult Malpighian Tubules    206.6 Adult Fat Body    195.2 Adult Salivary Gland    905.4 Adult Heart    217 Adult VirginFemale Spermatheca    288 Adult InseminatedFemale Spermatheca    333.2 Adult Ovary    270.7 Adult Testis    80.9 Adult Male Accessory Gland  1120.2 Adult Carcass    207 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    147.825 Larval Midgut    254.1 Larval Hindgut    236.1 Larval Malpighian Tubules    193.1 Larval Fat Body    180 Larval Salivary Gland    1003.1 Larval Trachea    277.275 Larval Carcass    261.5 Adult Head    181.8 Adult Eye    101.425 Adult Brain    154.4 Adult Thoracic-Abdominal Ganglion    167.6 Adult Crop    245.3 Adult Midgut    306.2 Adult Hindgut    274.8 Adult Malpighian Tubules    206.6 Adult Fat Body    195.2 Adult Salivary Gland    905.4 Adult Heart    217 Adult VirginFemale Spermatheca    288 Adult InseminatedFemale Spermatheca    333.2 Adult Ovary    270.7 Adult Testis    80.9 Adult Male Accessory Gland    1120.2 Adult Carcass    207 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    181.8   NA  Eye    101.425   NA  Brain    154.4   147.825  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    167.6   NA  Crop    245.3   254.1  Midgut    306.2   236.1  Hindgut    274.8   193.1  Malpighian Tubules    206.6   180  Fat Body    195.2   1003.1  Salivary Gland    905.4   NA  Heart    217   277.275  Trachea    NA   NA  VirginFemale Spermatheca    288   NA  InseminatedFemale Spermatheca    333.2   NA  Ovary    270.7   NA  Testis    80.9   NA  Male Accessory Gland    1120.2   261.5  Carcass    207 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_03
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030990 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7556-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG7556 Stages(s) 1-3 Stages(s) 9-10 Stages(s) 11-12
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG7556GD13191 Phenotype manifest in Allele
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG7556 Class Mutagen Stocks Known lesion CG7556d04700 P-element activity 1 -- CG7556EY04469 P-element activity 1 -- CG7556GG01549 0 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG7556 Class Mutagen Stocks Known lesion CG7556GD13191 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG7556HMS00515 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG7556KK101766 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD13191} NA P{KK101766} NA P{TRiP.HMS00515} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPgy2}CG7556EY04469 NA P{Mae-UAS.6.11}CG7556GG01549 NA P{XP}CG7556d04700 NA
Gene Ontology: Function, Process & Cellular Component ( 5 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 5 terms )
Molecular Function
CV term Evidence References
DNA binding inferred from electronic annotation with InterPro:IPR001005, InterPro:IPR012287 (FlyBase Curators et al., 2004-) heat shock protein binding inferred from electronic annotation with InterPro:IPR001623, InterPro:IPR003095, InterPro:IPR018253 (FlyBase Curators et al., 2004-) unfolded protein binding inferred from electronic annotation with InterPro:IPR003095 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
protein folding inferred from electronic annotation with InterPro:IPR003095 (FlyBase Curators et al., 2004-) regulation of transcription, DNA-dependent inferred from electronic annotation with InterPro:IPR012287 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG7556 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 59208 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0030990 DroID - A comprehensive database of gene and protein interactions. • FBgn0030990 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 32902
Orthologs
Genome-wide drosophilid orthologs	Dana\GF16003 Dere\GG18074 Dgri\GH17711 Dmoj\GI15454 Dper\GL13020 Dpse\GA20437 Dsec\GM22763 Dsim\GD15599 Dvir\GJ19169 Dwil\GK25169 Dyak\GE15471
Curated drosophilid orthologs	Dpse\GA20437
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL003791-PA Aedes aegypti (mosquito) AGAP000261-PA Anopheles gambiae (mosquito) XP_624533.1 Apis mellifera (honey bee) XP_001943361.1 Acyrthosiphon pisum (pea aphid) 283922 Branchiostoma floridae (lancelet) BGIBMGA006645-PA Bombyx mori (silk worm) CN13491 Caenorhabditis brenneri (small nematode) CBP07506 Caenorhabditis briggsae (nematode) CE39158 Caenorhabditis elegans (worm) ENSCAFP00000006171 Canis familiaris (dog) CAGL0J01936g Candida glabrata (haploid yeast) ENSCINP00000007593 Ciona intestinalis (sea squirt) JA14984 Caenorhabditis japonica (nematode) CPIJ017724 Culex pipens (mosquito) ENSCPOP00000011085 Cavia porcellus (guinea pig) 178083 Chlamidomonas reinhardtii (green alga) RP28565 Caenorhabditis remanei (nematode) ENSCSAVP00000005859 Ciona savignyi (sedentary tunicate) 225101 Daphnia pulex (daphnia) 330200 Daphnia pulex (daphnia) ENSDARP00000073973 Danio rerio (zebra fish) ENSECAP00000005918 Equus caballus (horse) ENSGACP00000003327 Gymnopilus aculeatus (mushroom) ENSGALP00000012838 Gallus gallus (chicken) ENSP00000366179 Homo sapiens (human) ISCW012013-PA Ixodes scapularis (deer tick) ENSMODP00000011345 Monodelphis domestica (gray opossum) ENSMMUP00000031133 Macaca mulatta (rhesus monkey) ENSMUSP00000028072 Mus musculus (house mouse) 90063 Nematostella vectensis (starlet anemone) XP_001606638.1 Nasonia vitripennis (wasp) ENSOANP00000009067 Ornithorynchus anatinus (platypus) ENSORLP00000010272 Oryzias latipes (japanese killifish) PHUM002480-PA Pediculus humanus (human body louse) PP22853 Pristionchus pacificus (nematode) ENSPPYP00000002488 Pongo pygmaeus (orangutan) 132202 Phytophthora sojae (root rot pathogen) ENSPTRP00000003982 Pan troglodytes (chimpanzee) ENSRNOP00000000162 Rattus norvegicus (norway rat) Smp_173390 Schistosoma mansoni (trematode parasite) SPAC2E1P5.03 Schizosaccharomyces pombe (fission yeast) XP_001178586.1 Strongylocentrotus purpuratus (purple sea urchin) XP_974769.2 Tribolium castaneum (red flour beetle) Tc00.1047053506473.20 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053508999.10 Trypanosoma cruzi (parasitic trypanosome) 22339 Thalassiosira pseudonana (marine diatom) ENSTRUP00000009573 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000016095 Xenopus tropicalis (frog) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB16058 NV12329 LH15853 ISCW012013 FBgn0233047 FBgn0227128 FBgn0206314 FBgn0187264 FBgn0177633 JGI_V11_330200 JGI_V11_225101 JGI_V11_261672 FBgn0080432 FBgn0150626 FBgn0138203 FBgn0125181 FBgn0110291 FBgn0093026 CPIJ017724 BGIBMGA006645 ACYPI005335 GB15674 AGAP000261 AAEL003791 PHUM258010 GLEAN_10179
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	15748 y1 w67c23 P{EPgy2}CG7556EY04469 32511 y1 sc* v1; P{TRiP.HMS00515}attP2
Harvard	- P{XP}CG7556d04700
VDRC	v107020 P{KK101766}VIE-260B v28621 w1118; P{GD13191}v28621 v28622 w1118; P{GD13191}v28622
Genomic Clones ( 1 )
	BACR49A05 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 48 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH07340
Other clones	DPiM_GH07340
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT03208 AT20573 GH11535 GH27712 LD31676 RE16363 RE21271 RE30119 RE30982 RE57464 RE58124 RE62433 RH10458 RH16218 RH23252 RH28856 RH34073 RH36143 RH52684 SD09868 SD12041 SD15176 SD15707 SD27672 UT01126
Other clones	30114 35358 122824 160098 166247 274898 CK01.120B.D6 CK01.169B.A2 Dmel_dig_010739_0615_0676 EK091847 EK138556 EK146046 EK150108 EK165607 EK200706 EK246041 EK262951 EK302516 FGM305D02 IP18532 RE04171
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0030990 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32902
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_133126 RefSeq (Proteins) • NP_573354 DDBJ / EMBL / GenBank • AAF48924 AAM50137 AI108494 AI402078 AY119483 CZ474078 Entrez Gene - A searchable database of RefSeq genes. • 32902 UniProtKB/TrEMBL • Q9VWL4
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • SANT domain, DNA binding (IPR001005) Heat shock protein DnaJ, N-terminal (IPR001623) Heat shock protein DnaJ (IPR003095) Homeodomain-like (IPR009057) Heat shock protein DnaJ, conserved site (IPR018253) Myb, DNA-binding (IPR014778) MYB-like (IPR017877) SANT, eukarya (IPR017884) Homeodomain-related (IPR012287)
Linkouts
	BioGRID - A database of protein and genetic interactions • 59208 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0030990 DroID - A comprehensive database of gene and protein interactions. • FBgn0030990 DRSC - Results from RNAi screens. • FBgn0030990 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0030990 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7556-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0030990 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32902 InParanoid A subset of ortholog calls from InParanoid. • AAEL003791-PA Aedes aegypti (mosquito) AGAP000261-PA Anopheles gambiae (mosquito) XP_624533.1 Apis mellifera (honey bee) XP_001943361.1 Acyrthosiphon pisum (pea aphid) 283922 Branchiostoma floridae (lancelet) BGIBMGA006645-PA Bombyx mori (silk worm) CN13491 Caenorhabditis brenneri (small nematode) CBP07506 Caenorhabditis briggsae (nematode) CE39158 Caenorhabditis elegans (worm) ENSCAFP00000006171 Canis familiaris (dog) CAGL0J01936g Candida glabrata (haploid yeast) ENSCINP00000007593 Ciona intestinalis (sea squirt) JA14984 Caenorhabditis japonica (nematode) CPIJ017724 Culex pipens (mosquito) ENSCPOP00000011085 Cavia porcellus (guinea pig) 178083 Chlamidomonas reinhardtii (green alga) RP28565 Caenorhabditis remanei (nematode) ENSCSAVP00000005859 Ciona savignyi (sedentary tunicate) 225101 Daphnia pulex (daphnia) 330200 Daphnia pulex (daphnia) ENSDARP00000073973 Danio rerio (zebra fish) ENSECAP00000005918 Equus caballus (horse) ENSGACP00000003327 Gymnopilus aculeatus (mushroom) ENSGALP00000012838 Gallus gallus (chicken) ENSP00000366179 Homo sapiens (human) ISCW012013-PA Ixodes scapularis (deer tick) ENSMODP00000011345 Monodelphis domestica (gray opossum) ENSMMUP00000031133 Macaca mulatta (rhesus monkey) ENSMUSP00000028072 Mus musculus (house mouse) 90063 Nematostella vectensis (starlet anemone) XP_001606638.1 Nasonia vitripennis (wasp) ENSOANP00000009067 Ornithorynchus anatinus (platypus) ENSORLP00000010272 Oryzias latipes (japanese killifish) PHUM002480-PA Pediculus humanus (human body louse) PP22853 Pristionchus pacificus (nematode) ENSPPYP00000002488 Pongo pygmaeus (orangutan) 132202 Phytophthora sojae (root rot pathogen) ENSPTRP00000003982 Pan troglodytes (chimpanzee) ENSRNOP00000000162 Rattus norvegicus (norway rat) Smp_173390 Schistosoma mansoni (trematode parasite) SPAC2E1P5.03 Schizosaccharomyces pombe (fission yeast) XP_001178586.1 Strongylocentrotus purpuratus (purple sea urchin) XP_974769.2 Tribolium castaneum (red flour beetle) Tc00.1047053506473.20 Trypanosoma cruzi (parasitic trypanosome) Tc00.1047053508999.10 Trypanosoma cruzi (parasitic trypanosome) 22339 Thalassiosira pseudonana (marine diatom) ENSTRUP00000009573 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000016095 Xenopus tropicalis (frog) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 32902 modMine - Data generated by the modENCODE project. • FBgn0030990 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB16058 NV12329 LH15853 ISCW012013 FBgn0233047 FBgn0227128 FBgn0206314 FBgn0187264 FBgn0177633 JGI_V11_330200 JGI_V11_225101 JGI_V11_261672 FBgn0080432 FBgn0150626 FBgn0138203 FBgn0125181 FBgn0110291 FBgn0093026 CPIJ017724 BGIBMGA006645 ACYPI005335 GB15674 AGAP000261 AAEL003791 PHUM258010 GLEAN_10179
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG7556 (Sathyanarayanan et al., 2008, Keleman et al., 2009.8.5, Ni et al., 2010.12.1)
Name Synonym
Secondary FlyBase IDs
References ( 16 )
Research paper	Baycin-Hizal et al., 2011, J. Proteome Res. 10(6): 2777--2784 GlycoFly: A Database of Drosophila N-linked Glycoproteins Identified Using SPEG-MS Techniques. [FBrf0213834] Sathyanarayanan et al., 2008, Genes Dev. 22(11): 1522--1533 Identification of novel genes involved in light-dependent CRY degradation through a genome-wide RNAi screen. [FBrf0204805]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Ni et al., 2010.12.1, A genome-scale shRNA resource for transgenic RNAi in Drosophila. A genome-scale shRNA resource for transgenic RNAi in Drosophila. [FBrf0212437] Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis	FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]