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Gene Dmel\CG12702

General Information
Symbol	Dmel\CG12702	Species	D. melanogaster
Name		Annotation symbol	CG12702
Feature type	protein_coding_gene	FlyBase ID	FBgn0031070
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	18F1-18F1	Sequence location	X:19,653,201..19,656,356 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG12702 (FBgn0031070). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, adult ovary. Comments on Affy2 ProbeSet: ProbeSet 1634457_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG12702. Gene sequence location is X:19653201..19656356.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10	Clones FI02109
FB2012_01	Sequence features BKN24827 HFA19487 BKN46613
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 18F1-18F1   Limits computationally determined from genome sequence between P{EP}Sec61γEP1511 and P{EP}EP1116&P{EP}EP1344EP1344
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG12702 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG12702-RA FBtr0074809  NM_134511   2906   870
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG12702-PA   FBpp0074578   97.2   870   6.70     NP_608355   AAF49019
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA201613   AA263482   AA948784   AA948829   AA949912   AA950313   AA950482   AA952238   AA979405   AE014298 AAF49019   AI109582   AI512215   AI513893   AI515812   AI516544   AI519855   AI534282   AI546688   BF491383   BF496244   BF496371   BF496957   BG635629   BI163533   BI166837   BI231677   BI241540   BI356869   BI578048   BI578060   BT023495   BT126386   CK131299   CO311993   GH751190   GH773219   GH828217   GH829876   GH866231   GH884296   GH933619   GH935673
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VWC7
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0031070    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0031070 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed within 00-12 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0031070 expression level Developmental Stage   Expression Level embryo 00-02hr    3245 embryo 02-04hr    3643 embryo 04-06hr    5304 embryo 06-08hr    4576 embryo 08-10hr    3141 embryo 10-12hr    1512 embryo 12-14hr    769 embryo 14-16hr    883 embryo 16-18hr    513 embryo 18-20hr    324 embryo 20-22hr    375 embryo 22-24hr    437 larva L1    56 larva L2    94 larva L3 12hr old    145 larva L3 puffstage 1-2    307 larva L3 puffstage 3-6    510 larva L3 puffstage 7-9    509 white prepupae new    495 white prepupae 12hr    1057 white prepupae 24hr    878 pupae 2d postWPP    353 pupae 3d postWPP    219 pupae 4d postWPP    312 adult male 01day    381 adult male 05day    552 adult male 30day    467 adult female 01day    599 adult female 05day    1059 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (3245) embryo 02-04hr  (3643) embryo 04-06hr  (5304) embryo 06-08hr  (4576) embryo 08-10hr  (3141) embryo 10-12hr  (1512) embryo 12-14hr  (769) embryo 14-16hr  (883) embryo 16-18hr  (513) embryo 18-20hr  (324) embryo 20-22hr  (375) embryo 22-24hr  (437) larva L1    56 larva L2    94 larva L3 12hr old  (145) larva L3 puffstage 1-2  (307) larva L3 puffstage 3-6  (510) larva L3 puffstage 7-9  (509) white prepupae new  (495) white prepupae 12hr  (1057) white prepupae 24hr  (878) pupae 2d postWPP  (353) pupae 3d postWPP  (219) pupae 4d postWPP  (312) adult male 01day  (381) adult male 05day  (552) adult male 30day  (467) adult female 01day  (599) adult female 05day  (1059) adult female 30day  (1217) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (3245) embryo 02-04hr  (3643) embryo 04-06hr  (5304) embryo 06-08hr  (4576) embryo 08-10hr  (3141) embryo 10-12hr  (1512) embryo 12-14hr    769 embryo 14-16hr    883 embryo 16-18hr    513 embryo 18-20hr    324 embryo 20-22hr    375 embryo 22-24hr    437 larva L1    56 larva L2    94 larva L3 12hr old    145 larva L3 puffstage 1-2    307 larva L3 puffstage 3-6    510 larva L3 puffstage 7-9    509 white prepupae new    495 white prepupae 12hr    1057 white prepupae 24hr    878 pupae 2d postWPP    353 pupae 3d postWPP    219 pupae 4d postWPP    312 adult male 01day    381 adult male 05day    552 adult male 30day    467 adult female 01day    599 adult female 05day    1059 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    3245 embryo 02-04hr    3643 embryo 04-06hr    5304 embryo 06-08hr    4576 embryo 08-10hr    3141 embryo 10-12hr    1512 embryo 12-14hr    769 embryo 14-16hr    883 embryo 16-18hr    513 embryo 18-20hr    324 embryo 20-22hr    375 embryo 22-24hr    437 larva L1    56 larva L2    94 larva L3 12hr old    145 larva L3 puffstage 1-2    307 larva L3 puffstage 3-6    510 larva L3 puffstage 7-9    509 white prepupae new    495 white prepupae 12hr    1057 white prepupae 24hr    878 pupae 2d postWPP    353 pupae 3d postWPP    219 pupae 4d postWPP    312 adult male 01day    381 adult male 05day    552 adult male 30day    467 adult female 01day    599 adult female 05day    1059 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    3245 embryo 02-04hr    3643 embryo 04-06hr    5304 embryo 06-08hr    4576 embryo 08-10hr    3141 embryo 10-12hr    1512 embryo 12-14hr    769 embryo 14-16hr    883 embryo 16-18hr    513 embryo 18-20hr    324 embryo 20-22hr    375 embryo 22-24hr    437 larva L1    56 larva L2    94 larva L3 12hr old    145 larva L3 puffstage 1-2    307 larva L3 puffstage 3-6    510 larva L3 puffstage 7-9    509 white prepupae new    495 white prepupae 12hr    1057 white prepupae 24hr    878 pupae 2d postWPP    353 pupae 3d postWPP    219 pupae 4d postWPP    312 adult male 01day    381 adult male 05day    552 adult male 30day    467 adult female 01day    599 adult female 05day    1059 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0031070 expression level Developmental Stage   Expression Level embryo 00-02hr    3245 embryo 02-04hr    3643 embryo 04-06hr    5304 embryo 06-08hr    4576 embryo 08-10hr    3141 embryo 10-12hr    1512 embryo 12-14hr    769 embryo 14-16hr    883 embryo 16-18hr    513 embryo 18-20hr    324 embryo 20-22hr    375 embryo 22-24hr    437 larva L1    56 larva L2    94 larva L3 12hr old    145 larva L3 puffstage 1-2    307 larva L3 puffstage 3-6    510 larva L3 puffstage 7-9    509 white prepupae new    495 white prepupae 12hr    1057 white prepupae 24hr    878 pupae 2d postWPP    353 pupae 3d postWPP    219 pupae 4d postWPP    312 adult male 01day    381 adult male 05day    552 adult male 30day    467 adult female 01day    599 adult female 05day    1059 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (3245) embryo 02-04hr  (3643) embryo 04-06hr  (5304) embryo 06-08hr  (4576) embryo 08-10hr  (3141) embryo 10-12hr  (1512) embryo 12-14hr  (769) embryo 14-16hr  (883) embryo 16-18hr  (513) embryo 18-20hr  (324) embryo 20-22hr  (375) embryo 22-24hr  (437) larva L1    56 larva L2    94 larva L3 12hr old  (145) larva L3 puffstage 1-2  (307) larva L3 puffstage 3-6  (510) larva L3 puffstage 7-9  (509) white prepupae new  (495) white prepupae 12hr  (1057) white prepupae 24hr  (878) pupae 2d postWPP  (353) pupae 3d postWPP  (219) pupae 4d postWPP  (312) adult male 01day  (381) adult male 05day  (552) adult male 30day  (467) adult female 01day  (599) adult female 05day  (1059) adult female 30day  (1217) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (3245) embryo 02-04hr  (3643) embryo 04-06hr  (5304) embryo 06-08hr  (4576) embryo 08-10hr  (3141) embryo 10-12hr  1512 embryo 12-14hr    769 embryo 14-16hr    883 embryo 16-18hr    513 embryo 18-20hr    324 embryo 20-22hr    375 embryo 22-24hr    437 larva L1    56 larva L2    94 larva L3 12hr old    145 larva L3 puffstage 1-2    307 larva L3 puffstage 3-6    510 larva L3 puffstage 7-9    509 white prepupae new    495 white prepupae 12hr    1057 white prepupae 24hr    878 pupae 2d postWPP    353 pupae 3d postWPP    219 pupae 4d postWPP    312 adult male 01day    381 adult male 05day    552 adult male 30day    467 adult female 01day    599 adult female 05day    1059 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    3245 embryo 02-04hr    3643 embryo 04-06hr    5304 embryo 06-08hr    4576 embryo 08-10hr    3141 embryo 10-12hr    1512 embryo 12-14hr    769 embryo 14-16hr    883 embryo 16-18hr    513 embryo 18-20hr    324 embryo 20-22hr    375 embryo 22-24hr    437 larva L1    56 larva L2    94 larva L3 12hr old    145 larva L3 puffstage 1-2    307 larva L3 puffstage 3-6    510 larva L3 puffstage 7-9    509 white prepupae new    495 white prepupae 12hr    1057 white prepupae 24hr    878 pupae 2d postWPP    353 pupae 3d postWPP    219 pupae 4d postWPP    312 adult male 01day    381 adult male 05day    552 adult male 30day    467 adult female 01day    599 adult female 05day    1059 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    3245 embryo 02-04hr    3643 embryo 04-06hr    5304 embryo 06-08hr    4576 embryo 08-10hr    3141 embryo 10-12hr    1512 embryo 12-14hr    769 embryo 14-16hr    883 embryo 16-18hr    513 embryo 18-20hr    324 embryo 20-22hr    375 embryo 22-24hr    437 larva L1    56 larva L2    94 larva L3 12hr old    145 larva L3 puffstage 1-2    307 larva L3 puffstage 3-6    510 larva L3 puffstage 7-9    509 white prepupae new    495 white prepupae 12hr    1057 white prepupae 24hr    878 pupae 2d postWPP    353 pupae 3d postWPP    219 pupae 4d postWPP    312 adult male 01day    381 adult male 05day    552 adult male 30day    467 adult female 01day    599 adult female 05day    1059 adult female 30day    1217 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0031070    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0031070 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, adult ovary. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0031070 expression level Tissue   Expression Level Larval Central Nervous System    115.4 Larval Midgut    9.6 Larval Hindgut    12.7 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    4.3 Larval Trachea    21.625 Larval Carcass    14.725 Adult Head    5.2 Adult Eye    1.05 Adult Brain    3.5 Adult Thoracic-Abdominal Ganglion    1.3 Adult Crop    7.2 Adult Midgut    5.5 Adult Hindgut    6.5 Adult Malpighian Tubules    4.5 Adult Fat Body    6 Adult Salivary Gland no informative data Adult Heart    1.725 Adult VirginFemale Spermatheca    2.1 Adult InseminatedFemale Spermatheca    3.5 Adult Ovary    110.7 Adult Testis    54.3 Adult Male Accessory Gland    6.3 Adult Carcass    7.2 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    115.4 Larval Midgut    9.6 Larval Hindgut    12.7 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    4.3 Larval Trachea    21.625 Larval Carcass    14.725 Adult Head    5.2 Adult Eye    1.05 Adult Brain    3.5 Adult Thoracic-Abdominal Ganglion    1.3 Adult Crop    7.2 Adult Midgut    5.5 Adult Hindgut    6.5 Adult Malpighian Tubules    4.5 Adult Fat Body    6 Adult Salivary Gland no informative data Adult Heart    1.725 Adult VirginFemale Spermatheca    2.1 Adult InseminatedFemale Spermatheca    3.5 Adult Ovary    110.7 Adult Testis    54.3 Adult Male Accessory Gland    6.3 Adult Carcass    7.2 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    115.4 Larval Midgut    9.6 Larval Hindgut    12.7 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    4.3 Larval Trachea    21.625 Larval Carcass    14.725 Adult Head    5.2 Adult Eye    1.05 Adult Brain    3.5 Adult Thoracic-Abdominal Ganglion    1.3 Adult Crop    7.2 Adult Midgut    5.5 Adult Hindgut    6.5 Adult Malpighian Tubules    4.5 Adult Fat Body    6 Adult Salivary Gland no informative data Adult Heart    1.725 Adult VirginFemale Spermatheca    2.1 Adult InseminatedFemale Spermatheca    3.5 Adult Ovary    110.7 Adult Testis    54.3 Adult Male Accessory Gland    6.3 Adult Carcass    7.2 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    115.4 Larval Midgut    9.6 Larval Hindgut    12.7 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    4.3 Larval Trachea    21.625 Larval Carcass    14.725 Adult Head    5.2 Adult Eye    1.05 Adult Brain    3.5 Adult Thoracic-Abdominal Ganglion    1.3 Adult Crop    7.2 Adult Midgut    5.5 Adult Hindgut    6.5 Adult Malpighian Tubules    4.5 Adult Fat Body    6 Adult Salivary Gland no informative data Adult Heart    1.725 Adult VirginFemale Spermatheca    2.1 Adult InseminatedFemale Spermatheca    3.5 Adult Ovary    110.7 Adult Testis    54.3 Adult Male Accessory Gland    6.3 Adult Carcass    7.2 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0031070 expression level Tissue   Expression Level Larval Central Nervous System    115.4 Larval Midgut    9.6 Larval Hindgut    12.7 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    4.3 Larval Trachea    21.625 Larval Carcass    14.725 Adult Head    5.2 Adult Eye    1.05 Adult Brain    3.5 Adult Thoracic-Abdominal Ganglion    1.3 Adult Crop    7.2 Adult Midgut    5.5 Adult Hindgut    6.5 Adult Malpighian Tubules    4.5 Adult Fat Body    6 Adult Salivary Gland no informative data Adult Heart    1.725 Adult VirginFemale Spermatheca    2.1 Adult InseminatedFemale Spermatheca    3.5 Adult Ovary    110.7 Adult Testis    54.3 Adult Male Accessory Gland    6.3 Adult Carcass    7.2 Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    115.4 Larval Midgut    9.6 Larval Hindgut    12.7 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    4.3 Larval Trachea    21.625 Larval Carcass    14.725 Adult Head    5.2 Adult Eye    1.05 Adult Brain    3.5 Adult Thoracic-Abdominal Ganglion    1.3 Adult Crop    7.2 Adult Midgut    5.5 Adult Hindgut    6.5 Adult Malpighian Tubules    4.5 Adult Fat Body    6 Adult Salivary Gland no informative data Adult Heart    1.725 Adult VirginFemale Spermatheca    2.1 Adult InseminatedFemale Spermatheca    3.5 Adult Ovary    110.7 Adult Testis    54.3 Adult Male Accessory Gland    6.3 Adult Carcass    7.2 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    115.4 Larval Midgut    9.6 Larval Hindgut    12.7 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    4.3 Larval Trachea    21.625 Larval Carcass    14.725 Adult Head    5.2 Adult Eye    1.05 Adult Brain    3.5 Adult Thoracic-Abdominal Ganglion    1.3 Adult Crop    7.2 Adult Midgut    5.5 Adult Hindgut    6.5 Adult Malpighian Tubules    4.5 Adult Fat Body    6 Adult Salivary Gland no informative data Adult Heart    1.725 Adult VirginFemale Spermatheca    2.1 Adult InseminatedFemale Spermatheca    3.5 Adult Ovary    110.7 Adult Testis    54.3 Adult Male Accessory Gland    6.3 Adult Carcass    7.2 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    115.4 Larval Midgut    9.6 Larval Hindgut    12.7 Larval Malpighian Tubules    2.9 Larval Fat Body no informative data Larval Salivary Gland    4.3 Larval Trachea    21.625 Larval Carcass    14.725 Adult Head    5.2 Adult Eye    1.05 Adult Brain    3.5 Adult Thoracic-Abdominal Ganglion    1.3 Adult Crop    7.2 Adult Midgut    5.5 Adult Hindgut    6.5 Adult Malpighian Tubules    4.5 Adult Fat Body    6 Adult Salivary Gland no informative data Adult Heart    1.725 Adult VirginFemale Spermatheca    2.1 Adult InseminatedFemale Spermatheca    3.5 Adult Ovary    110.7 Adult Testis    54.3 Adult Male Accessory Gland    6.3 Adult Carcass    7.2 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body no informative data Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    5.2   NA  Eye    1.05   NA  Brain    3.5   115.4  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    1.3   NA  Crop    7.2   9.6  Midgut    5.5   12.7  Hindgut    6.5   2.9  Malpighian Tubules    4.5   no informative data  Fat Body    6   4.3  Salivary Gland    no informative data   NA  Heart    1.725   21.625  Trachea    NA   NA  VirginFemale Spermatheca    2.1   NA  InseminatedFemale Spermatheca    3.5   NA  Ovary    110.7   NA  Testis    54.3   NA  Male Accessory Gland    6.3   14.725  Carcass    7.2 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_17
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031070 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG12702-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG12702 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG12702GD7804 Phenotype manifest in Allele
Classical Alleles ( 2 )
For All Classical Alleles Show
Allele of CG12702 Class Mutagen Stocks Known lesion CG12702G916 P-element activity 1 -- CG12702e02355 0 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG12702 Class Mutagen Stocks Known lesion CG12702GD7804 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes
Aneuploid Aberrations
Disrupted in	Df(1)Exel6253 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD7804} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{RB}CG12702e02355 NA insertion of mobile activating element P{EP}CG12702G916 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG12702 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0031070
Orthologs
Genome-wide drosophilid orthologs	Dana\GF20464 Dere\GG18024 Dgri\GH24492 Dmoj\GI15247 Dper\GL12931 Dpse\GA11764 Dsec\GM22707 Dsim\GD15566 Dvir\GJ14819 Dwil\GK25769 Dyak\GE13456
Curated drosophilid orthologs	Dpse\GA11764
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL002195-PA Aedes aegypti (mosquito) AGAP008469-PA Anopheles gambiae (mosquito) XP_393467.2 Apis mellifera (honey bee) BGIBMGA004382-PA Bombyx mori (silk worm) CPIJ003496 Culex pipens (mosquito) ENSGALP00000024744 Gallus gallus (chicken) ENSP00000295746 Homo sapiens (human) ENSMMUP00000001199 Macaca mulatta (rhesus monkey) ENSMUSP00000044714 Mus musculus (house mouse) XP_001606107.1 Nasonia vitripennis (wasp) PHUM011512-PA Pediculus humanus (human body louse) ENSPPYP00000015175 Pongo pygmaeus (orangutan) ENSPTRP00000026219 Pan troglodytes (chimpanzee) ENSRNOP00000031394 Rattus norvegicus (norway rat) XP_973168.1 Tribolium castaneum (red flour beetle) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13999 NV11204 LH21477 FBgn0231128 FBgn0227728 FBgn0202023 FBgn0187231 FBgn0177577 JGI_V11_225665 FBgn0247571 FBgn0071813 FBgn0150537 FBgn0149719 FBgn0137996 FBgn0131948 FBgn0110242 FBgn0097471 CPIJ003496 ACYPI29982 GB11971 AGAP008469 AAEL002195 PHUM610140 GLEAN_05457
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
Bloomington	26613 w* P{EP}CG12702G916
VDRC	v24588 w1118; P{GD7804}v24588 v24589 w1118; P{GD7804}v24589/TM3
Genomic Clones ( 2 )
	BACR33M08 BACR48P17 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 40 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE07060
Other clones	FI02109
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT10001 AT10152 AT10978 AT28116 GH08817 GM27176 LD04708 LD06554 LD27415 LD27488 LD28475 LD28830 LD29343 LD30291 LD33958 LD39679 LD41486 LD42441 LD43979 LD45922 RE02955 RE22986 RE38635 RE43133 RE71846 RE71858 SD07059 SD10414 SD13089
Other clones	EK227608 RP003093079 RP003110947 RP003200430 RP003332776 RP003344613 RP003474015 RP003512807 RP003542665
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0031070 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32993
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_134511 RefSeq (Proteins) • NP_608355 DDBJ / EMBL / GenBank • AAF49019 BI166837 Entrez Gene - A searchable database of RefSeq genes. • 32993 UniProtKB/TrEMBL • Q9VWC7
Other Crossreferences
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0031070 DRSC - Results from RNAi screens. • FBgn0031070 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031070 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG12702-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0031070 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 32993 InParanoid A subset of ortholog calls from InParanoid. • AAEL002195-PA Aedes aegypti (mosquito) AGAP008469-PA Anopheles gambiae (mosquito) XP_393467.2 Apis mellifera (honey bee) BGIBMGA004382-PA Bombyx mori (silk worm) CPIJ003496 Culex pipens (mosquito) ENSGALP00000024744 Gallus gallus (chicken) ENSP00000295746 Homo sapiens (human) ENSMMUP00000001199 Macaca mulatta (rhesus monkey) ENSMUSP00000044714 Mus musculus (house mouse) XP_001606107.1 Nasonia vitripennis (wasp) PHUM011512-PA Pediculus humanus (human body louse) ENSPPYP00000015175 Pongo pygmaeus (orangutan) ENSPTRP00000026219 Pan troglodytes (chimpanzee) ENSRNOP00000031394 Rattus norvegicus (norway rat) XP_973168.1 Tribolium castaneum (red flour beetle) modMine - Data generated by the modENCODE project. • FBgn0031070 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13999 NV11204 LH21477 FBgn0231128 FBgn0227728 FBgn0202023 FBgn0187231 FBgn0177577 JGI_V11_225665 FBgn0247571 FBgn0071813 FBgn0150537 FBgn0149719 FBgn0137996 FBgn0131948 FBgn0110242 FBgn0097471 CPIJ003496 ACYPI29982 GB11971 AGAP008469 AAEL002195 PHUM610140 GLEAN_05457
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG12702 (Quinones-Coello, 2007, Obbard et al., 2009)
Name Synonym
Secondary FlyBase IDs
References ( 14 )
Research paper	Obbard et al., 2009, PLoS Genet. 5(10): e1000698 Quantifying adaptive evolution in the Drosophila immune system. [FBrf0208979] Asha et al., 2003, Genetics 163(1): 203--215 Analysis of ras-induced overproliferation in Drosophila hemocytes. [FBrf0155813]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Quinones-Coello, 2007, Genetics 175(3): Supplemental Table 1. List of genes associated with protein or enhancer traps. [FBrf0200393]
Personal communication to FlyBase	Bellen, 2009.2.6, BDGP_2009_0206.GenExel.xml BDGP_2009_0206.GenExel.xml [FBrf0206623] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Zhong, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126703]