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Gene Dmel\bves

General Information
Symbol	Dmel\bves	Species	D. melanogaster
Name	bves	Annotation symbol	CG32513
Feature type	protein_coding_gene	FlyBase ID	FBgn0031150
Gene Model Status	Current	Stock availability	19 publicly available
Genomic Location
Chromosome (arm)	X	Recombination map
Cytogenetic map	19E7-19E8	Sequence location	X:20,924,990..20,953,418 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene bves is referred to in FlyBase by the symbol Dmel\bves (CG32513, FBgn0031150). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 25 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Cyclic nucleotide-binding-like; Popeye protein; RmlC-like jelly roll fold. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult ovary. Comments on Affy2 ProbeSet: ProbeSet 1633387_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of bves. Gene sequence location is X:20924990..20953418.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 19E7-19E8   Limits computationally determined from genome sequence between P{EP}CG1702EP1525 and P{EP}EP1465&P{EP}CG1486EP1192
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\bves for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Tissue-specific extension of 3' UTRs observed during later stages (FBrf0218523, FBrf0219848); all variants may not be annotated Gene model reviewed during 5.45
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) bves-RA FBtr0077246  NM_134582   3952   414 bves-RB FBtr0077247  NM_206800   3789   414 bves-RC FBtr0332845  NM_001272823   3461   399 bves-RD FBtr0332846  NM_001272824   3428   388
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein bves-PA   FBpp0076939   45.2   414   7.19     NP_608426   AAF50859 bves-PB   FBpp0089240   45.2   414   7.19     NP_996523   AAS65416 bves-PC   FBpp0305068   43.4   399   7.18     NP_001259752   AGB95590 bves-PD   FBpp0305069   42.0   388   7.00     NP_001259753   AGB95591
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Popeye protein (IPR006916) Cyclic nucleotide-binding-like (IPR018490) RmlC-like jelly roll fold (IPR014710)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA696354   AA698252   AA940762   AE014298 AAF50859   AE014298 AAS65416   AF247183 AAG18016   AE014298 AGB95590   AE014298 AGB95591   AI061751   AY113513 AAM29518   AY119251 AAM51111   BF486514   BG639067   BI235870   BI372499   BI375959   BI376062   BI483849   BI580394   BI639180   BP540716   BP540717   BT132753   CK662315   CO179149   CO182778   CO186733   CO188820   CO267123   CO280298   CO280433   CO281504   CO282749   CO285588   CO296177   CO301351   CO305997   CO308610   CO310312   CO322088   CO329320   CO329487   CO329584   CO330011   CO331852   CO331896   CO333776   CO340297   CZ472949   CZ483658   CZ483659   CZ483892   CZ486224   DN154334   EC058381   EC062990   EC068368   EC079185   EC079195   EC085065   EC195187   EC201275   EC203786   EC205445   EC206343   EC210774   EC211336   EC216202   EC222230   EC223056   EC225084   EC227775   EC227840   EC227856   EC237985   EC244778   EC245228   EC247435   EC250317   EC254610   GH752158   GH754922   GH770398   GH775809   GH777304   GH780483   GH781807   GH789960   GH792530   GH797851   GH798190   GH809236   GH810106   GH814447   GH818425   GH818517   GH823906   GH823926   GH829321   GH834893   GH837110   GH838887   GH840466   GH847448   GH847985   GH851233   GH853299   GH853470   GH858447   GH860264   GH861104   GH861918   GH863633   GH864745   GH865180   GH865472   GH868106   GH872753   GH880300   GH885870   GH889873   GH890189   GH891937   GH894183   GH897085   GH899587   GH900176   GH902168   GH908791   GH912578   GH914585   GH914920   GH916005   GH917289   GH918022   GH919962   GH925788   GH936632   GH936644   GH940859   GH953532   GH954590   GH960415   GH964316   GH968164   GH970472   GH973159   GH974204   GH977254   GH978795   GH981518   GH982135   GH984103
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VRE2 Q8MRV2
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult ovary. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    98.45 Larval Midgut    27 Larval Hindgut    38.3 Larval Malpighian Tubules    46.9 Larval Fat Body    37.2 Larval Salivary Gland    59.9 Larval Trachea    37.825 Larval Carcass    46.05 Adult Head    34.8 Adult Eye    38.975 Adult Brain    53.6 Adult Thoracic-Abdominal Ganglion    53.5 Adult Crop    89.7 Adult Midgut    34.6 Adult Hindgut    62.4 Adult Malpighian Tubules    89.5 Adult Fat Body    27.2 Adult Salivary Gland    36.6 Adult Heart    24.825 Adult VirginFemale Spermatheca    35.7 Adult InseminatedFemale Spermatheca    37.8 Adult Ovary    145.9 Adult Testis    24.1 Adult Male Accessory Gland    84.5 Adult Carcass    36.6 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    98.45 Larval Midgut    27 Larval Hindgut    38.3 Larval Malpighian Tubules    46.9 Larval Fat Body    37.2 Larval Salivary Gland    59.9 Larval Trachea    37.825 Larval Carcass    46.05 Adult Head    34.8 Adult Eye    38.975 Adult Brain    53.6 Adult Thoracic-Abdominal Ganglion    53.5 Adult Crop    89.7 Adult Midgut    34.6 Adult Hindgut    62.4 Adult Malpighian Tubules    89.5 Adult Fat Body    27.2 Adult Salivary Gland    36.6 Adult Heart    24.825 Adult VirginFemale Spermatheca    35.7 Adult InseminatedFemale Spermatheca    37.8 Adult Ovary    145.9 Adult Testis    24.1 Adult Male Accessory Gland    84.5 Adult Carcass    36.6 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    98.45 Larval Midgut    27 Larval Hindgut    38.3 Larval Malpighian Tubules    46.9 Larval Fat Body    37.2 Larval Salivary Gland    59.9 Larval Trachea    37.825 Larval Carcass    46.05 Adult Head    34.8 Adult Eye    38.975 Adult Brain    53.6 Adult Thoracic-Abdominal Ganglion    53.5 Adult Crop    89.7 Adult Midgut    34.6 Adult Hindgut    62.4 Adult Malpighian Tubules    89.5 Adult Fat Body    27.2 Adult Salivary Gland    36.6 Adult Heart    24.825 Adult VirginFemale Spermatheca    35.7 Adult InseminatedFemale Spermatheca    37.8 Adult Ovary    145.9 Adult Testis    24.1 Adult Male Accessory Gland    84.5 Adult Carcass    36.6 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    98.45 Larval Midgut    27 Larval Hindgut    38.3 Larval Malpighian Tubules    46.9 Larval Fat Body    37.2 Larval Salivary Gland    59.9 Larval Trachea    37.825 Larval Carcass    46.05 Adult Head    34.8 Adult Eye    38.975 Adult Brain    53.6 Adult Thoracic-Abdominal Ganglion    53.5 Adult Crop    89.7 Adult Midgut    34.6 Adult Hindgut    62.4 Adult Malpighian Tubules    89.5 Adult Fat Body    27.2 Adult Salivary Gland    36.6 Adult Heart    24.825 Adult VirginFemale Spermatheca    35.7 Adult InseminatedFemale Spermatheca    37.8 Adult Ovary    145.9 Adult Testis    24.1 Adult Male Accessory Gland    84.5 Adult Carcass    36.6 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    98.45 Larval Midgut    27 Larval Hindgut    38.3 Larval Malpighian Tubules    46.9 Larval Fat Body    37.2 Larval Salivary Gland    59.9 Larval Trachea    37.825 Larval Carcass    46.05 Adult Head    34.8 Adult Eye    38.975 Adult Brain    53.6 Adult Thoracic-Abdominal Ganglion    53.5 Adult Crop    89.7 Adult Midgut    34.6 Adult Hindgut    62.4 Adult Malpighian Tubules    89.5 Adult Fat Body    27.2 Adult Salivary Gland    36.6 Adult Heart    24.825 Adult VirginFemale Spermatheca    35.7 Adult InseminatedFemale Spermatheca    37.8 Adult Ovary    145.9 Adult Testis    24.1 Adult Male Accessory Gland    84.5 Adult Carcass    36.6 Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    98.45 Larval Midgut    27 Larval Hindgut    38.3 Larval Malpighian Tubules    46.9 Larval Fat Body    37.2 Larval Salivary Gland    59.9 Larval Trachea    37.825 Larval Carcass    46.05 Adult Head    34.8 Adult Eye    38.975 Adult Brain    53.6 Adult Thoracic-Abdominal Ganglion    53.5 Adult Crop    89.7 Adult Midgut    34.6 Adult Hindgut    62.4 Adult Malpighian Tubules    89.5 Adult Fat Body    27.2 Adult Salivary Gland    36.6 Adult Heart    24.825 Adult VirginFemale Spermatheca    35.7 Adult InseminatedFemale Spermatheca    37.8 Adult Ovary    145.9 Adult Testis    24.1 Adult Male Accessory Gland    84.5 Adult Carcass    36.6 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    98.45 Larval Midgut    27 Larval Hindgut    38.3 Larval Malpighian Tubules    46.9 Larval Fat Body    37.2 Larval Salivary Gland    59.9 Larval Trachea    37.825 Larval Carcass    46.05 Adult Head    34.8 Adult Eye    38.975 Adult Brain    53.6 Adult Thoracic-Abdominal Ganglion    53.5 Adult Crop    89.7 Adult Midgut    34.6 Adult Hindgut    62.4 Adult Malpighian Tubules    89.5 Adult Fat Body    27.2 Adult Salivary Gland    36.6 Adult Heart    24.825 Adult VirginFemale Spermatheca    35.7 Adult InseminatedFemale Spermatheca    37.8 Adult Ovary    145.9 Adult Testis    24.1 Adult Male Accessory Gland    84.5 Adult Carcass    36.6 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    98.45 Larval Midgut    27 Larval Hindgut    38.3 Larval Malpighian Tubules    46.9 Larval Fat Body    37.2 Larval Salivary Gland    59.9 Larval Trachea    37.825 Larval Carcass    46.05 Adult Head    34.8 Adult Eye    38.975 Adult Brain    53.6 Adult Thoracic-Abdominal Ganglion    53.5 Adult Crop    89.7 Adult Midgut    34.6 Adult Hindgut    62.4 Adult Malpighian Tubules    89.5 Adult Fat Body    27.2 Adult Salivary Gland    36.6 Adult Heart    24.825 Adult VirginFemale Spermatheca    35.7 Adult InseminatedFemale Spermatheca    37.8 Adult Ovary    145.9 Adult Testis    24.1 Adult Male Accessory Gland    84.5 Adult Carcass    36.6 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    34.8   NA  Eye    38.975   NA  Brain    53.6   98.45  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    53.5   NA  Crop    89.7   27  Midgut    34.6   38.3  Hindgut    62.4   46.9  Malpighian Tubules    89.5   37.2  Fat Body    27.2   59.9  Salivary Gland    no informative data   NA  Heart    24.825   37.825  Trachea    NA   NA  VirginFemale Spermatheca    35.7   NA  InseminatedFemale Spermatheca    37.8   NA  Ovary    145.9   NA  Testis    24.1   NA  Male Accessory Gland    84.5   46.05  Carcass    36.6 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    32 central nervous system, pupae P8    43 head, virgin 1-day female    20 head, virgin 4-day female    20 head, virgin 20-day female    9 head, mated 1-day female    23 head, mated 4-day female    17 head, mated 20-day female    10 head, mated 1-day male    26 head, mated 4-day male    31 head, mated 20-day male    24 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    25 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    9 digestive system, 4-day adult    16 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    21 fat body, pupae P8    28 carcass, larvae L3 wandering    12 carcass, 1-day adult    9 carcass, 4-day adult    13 carcass, 20-day adult    9 ovary, virgin 4-day female    27 ovary, mated 4-day female    45 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3  (32) central nervous system, pupae P8  (43) head, virgin 1-day female    20 head, virgin 4-day female    20 head, virgin 20-day female    9 head, mated 1-day female    23 head, mated 4-day female    17 head, mated 20-day female    10 head, mated 1-day male  26 head, mated 4-day male  (31) head, mated 20-day male    24 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    25 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    9 digestive system, 4-day adult    16 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    21 fat body, pupae P8  (28) carcass, larvae L3 wandering    12 carcass, 1-day adult    9 carcass, 4-day adult    13 carcass, 20-day adult    9 ovary, virgin 4-day female  (27) ovary, mated 4-day female  (45) testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    32 central nervous system, pupae P8    43 head, virgin 1-day female    20 head, virgin 4-day female    20 head, virgin 20-day female    9 head, mated 1-day female    23 head, mated 4-day female    17 head, mated 20-day female    10 head, mated 1-day male    26 head, mated 4-day male    31 head, mated 20-day male    24 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    25 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    9 digestive system, 4-day adult    16 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    21 fat body, pupae P8    28 carcass, larvae L3 wandering    12 carcass, 1-day adult    9 carcass, 4-day adult    13 carcass, 20-day adult    9 ovary, virgin 4-day female    27 ovary, mated 4-day female    45 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    32 central nervous system, pupae P8    43 head, virgin 1-day female    20 head, virgin 4-day female    20 head, virgin 20-day female    9 head, mated 1-day female    23 head, mated 4-day female    17 head, mated 20-day female    10 head, mated 1-day male    26 head, mated 4-day male    31 head, mated 20-day male    24 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    25 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    9 digestive system, 4-day adult    16 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    21 fat body, pupae P8    28 carcass, larvae L3 wandering    12 carcass, 1-day adult    9 carcass, 4-day adult    13 carcass, 20-day adult    9 ovary, virgin 4-day female    27 ovary, mated 4-day female    45 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    32 central nervous system, pupae P8    43 head, virgin 1-day female    20 head, virgin 4-day female    20 head, virgin 20-day female    9 head, mated 1-day female    23 head, mated 4-day female    17 head, mated 20-day female    10 head, mated 1-day male    26 head, mated 4-day male    31 head, mated 20-day male    24 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    25 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    9 digestive system, 4-day adult    16 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    21 fat body, pupae P8    28 carcass, larvae L3 wandering    12 carcass, 1-day adult    9 carcass, 4-day adult    13 carcass, 20-day adult    9 ovary, virgin 4-day female    27 ovary, mated 4-day female    45 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3  32 central nervous system, pupae P8  (43) head, virgin 1-day female    20 head, virgin 4-day female    20 head, virgin 20-day female    9 head, mated 1-day female    23 head, mated 4-day female    17 head, mated 20-day female    10 head, mated 1-day male  26 head, mated 4-day male  31 head, mated 20-day male    24 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    25 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    9 digestive system, 4-day adult    16 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    21 fat body, pupae P8  28 carcass, larvae L3 wandering    12 carcass, 1-day adult    9 carcass, 4-day adult    13 carcass, 20-day adult    9 ovary, virgin 4-day female  27 ovary, mated 4-day female  (45) testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    32 central nervous system, pupae P8    43 head, virgin 1-day female    20 head, virgin 4-day female    20 head, virgin 20-day female    9 head, mated 1-day female    23 head, mated 4-day female    17 head, mated 20-day female    10 head, mated 1-day male    26 head, mated 4-day male    31 head, mated 20-day male    24 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    25 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    9 digestive system, 4-day adult    16 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    21 fat body, pupae P8    28 carcass, larvae L3 wandering    12 carcass, 1-day adult    9 carcass, 4-day adult    13 carcass, 20-day adult    9 ovary, virgin 4-day female    27 ovary, mated 4-day female    45 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    10 central nervous system, larvae L3    32 central nervous system, pupae P8    43 head, virgin 1-day female    20 head, virgin 4-day female    20 head, virgin 20-day female    9 head, mated 1-day female    23 head, mated 4-day female    17 head, mated 20-day female    10 head, mated 1-day male    26 head, mated 4-day male    31 head, mated 20-day male    24 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    25 digestive system, larvae L3 wandering    7 digestive system, 1-day adult    9 digestive system, 4-day adult    16 digestive system, 20-day adult    9 fat body, larvae L3 wandering    4 fat body, white prepupae    21 fat body, pupae P8    28 carcass, larvae L3 wandering    12 carcass, 1-day adult    9 carcass, 4-day adult    13 carcass, 20-day adult    9 ovary, virgin 4-day female    27 ovary, mated 4-day female    45 testis, mated 4-day male    5 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, at stages throughout the larval period, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    3 embryo 04-06hr    3 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    11 embryo 12-14hr    13 embryo 14-16hr    8 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    4 embryo 22-24hr    5 larva L1    4 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    4 white prepupae new    7 white prepupae 12hr    11 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    6 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    5 adult male 30day    5 adult female 01day    6 adult female 05day    9 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    3 embryo 04-06hr    3 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    11 embryo 12-14hr    13 embryo 14-16hr    8 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    4 embryo 22-24hr    5 larva L1    4 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    4 white prepupae new    7 white prepupae 12hr    11 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    6 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    5 adult male 30day    5 adult female 01day    6 adult female 05day    9 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    3 embryo 04-06hr    3 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    11 embryo 12-14hr    13 embryo 14-16hr    8 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    4 embryo 22-24hr    5 larva L1    4 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    4 white prepupae new    7 white prepupae 12hr    11 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    6 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    5 adult male 30day    5 adult female 01day    6 adult female 05day    9 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    3 embryo 04-06hr    3 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    11 embryo 12-14hr    13 embryo 14-16hr    8 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    4 embryo 22-24hr    5 larva L1    4 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    4 white prepupae new    7 white prepupae 12hr    11 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    6 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    5 adult male 30day    5 adult female 01day    6 adult female 05day    9 adult female 30day    8 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    3 embryo 04-06hr    3 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    11 embryo 12-14hr    13 embryo 14-16hr    8 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    4 embryo 22-24hr    5 larva L1    4 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    4 white prepupae new    7 white prepupae 12hr    11 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    6 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    5 adult male 30day    5 adult female 01day    6 adult female 05day    9 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    3 embryo 04-06hr    3 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    11 embryo 12-14hr    13 embryo 14-16hr    8 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    4 embryo 22-24hr    5 larva L1    4 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    4 white prepupae new    7 white prepupae 12hr    11 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    6 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    5 adult male 30day    5 adult female 01day    6 adult female 05day    9 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    3 embryo 04-06hr    3 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    11 embryo 12-14hr    13 embryo 14-16hr    8 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    4 embryo 22-24hr    5 larva L1    4 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    4 white prepupae new    7 white prepupae 12hr    11 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    6 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    5 adult male 30day    5 adult female 01day    6 adult female 05day    9 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    3 embryo 04-06hr    3 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    11 embryo 12-14hr    13 embryo 14-16hr    8 embryo 16-18hr    9 embryo 18-20hr    6 embryo 20-22hr    4 embryo 22-24hr    5 larva L1    4 larva L2    4 larva L3 12hr old    3 larva L3 puffstage 1-2    1 larva L3 puffstage 3-6    2 larva L3 puffstage 7-9    4 white prepupae new    7 white prepupae 12hr    11 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    6 pupae 4d postWPP    4 adult male 01day    5 adult male 05day    5 adult male 30day    5 adult female 01day    6 adult female 05day    9 adult female 30day    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    25 Schneider line 2 Sg4    6 embryonic 1182-4H    27 embryonic GM2    61 embryonic Kc167    22 embryonic S1    14 embryonic S3    7 leg disc CME L1    11 wing disc CME-W2    10 wing disc ML-DmD8    49 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    8 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    13 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    18 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    10 tumorous blood cells mbn2    14 ovary fGS/OSS    21 ovary OSC    318 ovary OSS    66 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    25 Schneider line 2 Sg4    6 embryonic 1182-4H  (27) embryonic GM2  (61) embryonic Kc167    22 embryonic S1    14 embryonic S3    7 leg disc CME L1    11 wing disc CME-W2    10 wing disc ML-DmD8  (49) wing disc ML-DmD9    20 wing disc ML-DmD16-c3  (39) wing disc ML-DmD21    8 wing disc ML-DmD32  (32) haltere disc ML-DmD17-c3    13 eye-antennal disc ML-DmD11  (35) antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    18 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    10 tumorous blood cells mbn2    14 ovary fGS/OSS    21 ovary OSC  (318) ovary OSS  (66) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    25 Schneider line 2 Sg4    6 embryonic 1182-4H    27 embryonic GM2    61 embryonic Kc167    22 embryonic S1    14 embryonic S3    7 leg disc CME L1    11 wing disc CME-W2    10 wing disc ML-DmD8    49 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    8 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    13 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    18 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    10 tumorous blood cells mbn2    14 ovary fGS/OSS    21 ovary OSC  (318) ovary OSS    66 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    25 Schneider line 2 Sg4    6 embryonic 1182-4H    27 embryonic GM2    61 embryonic Kc167    22 embryonic S1    14 embryonic S3    7 leg disc CME L1    11 wing disc CME-W2    10 wing disc ML-DmD8    49 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    8 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    13 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    18 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    10 tumorous blood cells mbn2    14 ovary fGS/OSS    21 ovary OSC    318 ovary OSS    66 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    25 Schneider line 2 Sg4    6 embryonic 1182-4H    27 embryonic GM2    61 embryonic Kc167    22 embryonic S1    14 embryonic S3    7 leg disc CME L1    11 wing disc CME-W2    10 wing disc ML-DmD8    49 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    8 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    13 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    18 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    10 tumorous blood cells mbn2    14 ovary fGS/OSS    21 ovary OSC    318 ovary OSS    66 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    25 Schneider line 2 Sg4    6 embryonic 1182-4H  27 embryonic GM2  (61) embryonic Kc167    22 embryonic S1    14 embryonic S3    7 leg disc CME L1    11 wing disc CME-W2    10 wing disc ML-DmD8  (49) wing disc ML-DmD9    20 wing disc ML-DmD16-c3  (39) wing disc ML-DmD21    8 wing disc ML-DmD32  32 haltere disc ML-DmD17-c3    13 eye-antennal disc ML-DmD11  (35) antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    18 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    10 tumorous blood cells mbn2    14 ovary fGS/OSS    21 ovary OSC  (318) ovary OSS  (66) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    25 Schneider line 2 Sg4    6 embryonic 1182-4H    27 embryonic GM2    61 embryonic Kc167    22 embryonic S1    14 embryonic S3    7 leg disc CME L1    11 wing disc CME-W2    10 wing disc ML-DmD8    49 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    8 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    13 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    18 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    10 tumorous blood cells mbn2    14 ovary fGS/OSS    21 ovary OSC  (318) ovary OSS    66 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    25 Schneider line 2 Sg4    6 embryonic 1182-4H    27 embryonic GM2    61 embryonic Kc167    22 embryonic S1    14 embryonic S3    7 leg disc CME L1    11 wing disc CME-W2    10 wing disc ML-DmD8    49 wing disc ML-DmD9    20 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    8 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    13 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    18 CNS ML-DmBG1-c1    12 CNS ML-DmBG2-c2    10 tumorous blood cells mbn2    14 ovary fGS/OSS    21 ovary OSC    318 ovary OSS    66 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    25 cold shock, 4-day adult    15 heat shock, 4-day adult    7 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    38 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    49 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    13 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    37 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    26 Paraquat 10 mM 48 hrs, 4-day adult    13 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    25 cold shock, 4-day adult    15 heat shock, 4-day adult    7 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult  (38) Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult  (49) Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult  (28) Ethanol 2.5% 3 hrs, larvae L3    13 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (37) Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult  26 Paraquat 10 mM 48 hrs, 4-day adult    13 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    25 cold shock, 4-day adult    15 heat shock, 4-day adult    7 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    38 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    49 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    13 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    37 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    26 Paraquat 10 mM 48 hrs, 4-day adult    13 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    25 cold shock, 4-day adult    15 heat shock, 4-day adult    7 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    38 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    49 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    13 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    37 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    26 Paraquat 10 mM 48 hrs, 4-day adult    13 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    25 cold shock, 4-day adult    15 heat shock, 4-day adult    7 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    38 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    49 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    13 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    37 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    26 Paraquat 10 mM 48 hrs, 4-day adult    13 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    25 cold shock, 4-day adult    15 heat shock, 4-day adult    7 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult  (38) Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult  (49) Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult  28 Ethanol 2.5% 3 hrs, larvae L3    13 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (37) Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult  26 Paraquat 10 mM 48 hrs, 4-day adult    13 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    25 cold shock, 4-day adult    15 heat shock, 4-day adult    7 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    38 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    49 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    13 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    37 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    26 Paraquat 10 mM 48 hrs, 4-day adult    13 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    25 cold shock, 4-day adult    15 heat shock, 4-day adult    7 Cadmium 50 mM 6 hrs, larvae L3    2 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    38 Copper 0.5 mM 12 hrs, larvae L3    3 Copper 15 mM 48 hrs, 4-day adult    49 Zinc 5 mM 12 hrs, larvae L3    11 Zinc 4.5 mM 48 hrs, 4-day adult    28 Ethanol 2.5% 3 hrs, larvae L3    13 Ethanol 5% 3 hrs, larvae L3    3 Ethanol 10% 3 hrs, larvae L3    3 Caffeine 1.5 mg/ml 4 hrs, larvae L3    3 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    37 Caffeine 25 mg/ml 48 hrs, 4-day adult    24 Paraquat 5 mM 48 hrs, 4-day adult    26 Paraquat 10 mM 48 hrs, 4-day adult    13 Rotenone 2 μg 12 hrs, larvae L3    3 Rotenone 8 μg 12 hrs, larvae L3    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_27 mE1_20_mRNA_expression_cluster_04
External Data & Images
Linkouts	BDGP expression data • RE59473 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031150 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG32513-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | embryonic stage | maternal effect | heat sensitive bvesa.hs viable bvesf01200 viable, with Scer\GAL4pnr-MD237 bvesGD3702 bvesGD5731 Sterility Allele fertile bvesf01200 Other Phenotypes Allele chemical resistant bvesf01175 hyperactive | conditional bvesf01175 Phenotype manifest in Allele
Classical Alleles ( 19 )
For All Classical Alleles Show
Allele of bves Class Mutagen Stocks Known lesion bvesf01200 piggyBac transposase 2 -- bves5-HA-2849 1 -- bves5-HA-2895 1 -- bves5-HA-3098 1 -- bvesCB-5486-3 1 -- bvesd02697 P-element activity 1 -- bvese00647 1 -- bvesEY00407 1 -- bvesf01175 piggyBac transposase 1 -- bvesf03650 piggyBac transposase 1 -- bvesKG09159 1 -- bvesMB01031 1 -- bvesNP0811 1 -- bvesNP3505 1 -- bvesNP3589 1 -- bvesC648 0 Yes bvesf01420 piggyBac transposase 0 -- bvesGG01370 0 -- bvesGG01711 0 --
Alleles Carried on Transgenic Constructs ( 6 )
For All Alleles Carried on Transgenic Constructs Show
Allele of bves Class Mutagen Stocks Known lesion bvesGD3702 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes bvesGD5731 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes bvesKK109205 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes bvesa.hs in vitro construct - regulatory fusion 0 Yes bvesNIG.15448R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes bvesNIG.1754R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD3702} NA P{GD5731} NA P{KK109205} NA P{NIG.1754R} NA P{NIG.15448R} NA heat-shock construct P{hs-bves.AS} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap binary system Mi{ET1}bvesMB01031 No P{GawB}bvesC648 No P{GawB}bvesNP0811 No P{GawB}bvesNP3505 No P{GawB}bvesNP3589 No miscellaneous insertions P{RS3}bvesCB-5486-3 NA P{RS5}bves5-HA-2849 NA P{RS5}bves5-HA-2895 NA P{RS5}bves5-HA-3098 NA P{SUPor-P}bvesKG09159 NA PBac{RB}bvese00647 NA PBac{WH}bvesf01175 NA PBac{WH}bvesf01200 NA PBac{WH}bvesf01420 NA PBac{WH}bvesf03650 NA insertion of mobile activating element P{EPgy2}bvesEY00407 NA P{Mae-UAS.6.11}bvesGG01370 NA P{Mae-UAS.6.11}bvesGG01711 NA P{XP}bvesd02697 NA
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
membrane inferred from electronic annotation with InterPro:IPR006916 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions bves allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0031150
Orthologs
OrthoDB Orthologs (38) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6HT9CB Dipteran inclusive ortholog search EOG6P5KJX Insect inclusive ortholog search EOG6R4XZ4 Arthropod inclusive ortholog search EOG6VQ84P Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG6HT9CB)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\bves     Drosophila simulans   Dsim\GD17511 Y   Drosophila simulans   Dsim\GD24703     Drosophila sechellia   Dsec\GM23060 Y   Drosophila erecta   Dere\GG19706 Y   Drosophila yakuba   Dyak\GE17905 Y   Drosophila ananassae   Dana\GF21712 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA22366 Y   Drosophila persimilis   Dper\GL16399 Y   Drosophila willistoni   Dwil\GK25611 Y   Drosophila virilis   Dvir\GJ19369 Y   Drosophila mojavensis   Dmoj\GI14313 Y   Drosophila grimshawi   Dgri\GH11835 Y
Orthologs in non-Drosophila Dipterans (EOG6P5KJX)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL007746   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL007745   Anopheles gambiae Malaria mosquito  Agam\AGAP000013   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ011456   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ011460
Orthologs in non-Dipteran Insects (EOG6R4XZ4)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB48829   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG008641   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH20801   Atta cephalotes Leafcutter ant  Acep\ACEP13758   Camponotus floridanus Florida carpenter ant  Cflo\CFLO18515   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL17660   Linepithema humile Argentine ant  Lhum\LH22735   Pogonomyrmex barbatus Red harvester ant  Pbar\PB17819   Acyrthosiphon pisum Pea aphid  Apim\ACYPI003139   Bombyx mori Silkmoth  Bmor\BGIBMGA011292   Pediculus humanus Human body louse  Phum\PHUM106840   Pediculus humanus Human body louse  Phum\PHUM106860
Orthologs in non-Insect Arthropods (EOG6VQ84P)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_302399   Daphnia pulex Water flea  Dpux\WWTR1   Daphnia pulex Water flea  Dpux\JGI_V11_210626   Ixodes scapularis Deer tick  Isca\ISCW004194   Ixodes scapularis Deer tick  Isca\ISCW004193   Ixodes scapularis Deer tick  Isca\ISCW024261   Ixodes scapularis Deer tick  Isca\ISCW016427   Ixodes scapularis Deer tick  Isca\ISCW024190
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD17511 Drosophila sechellia Dsec\GM23060 Drosophila erecta Dere\GG19706 Drosophila yakuba Dyak\GE17905 Drosophila ananassae Dana\GF21712 Drosophila pseudoobscura pseudoobscura Dpse\GA22366 Drosophila persimilis Dper\GL16399 Drosophila willistoni Dwil\GK25611 Drosophila virilis Dvir\GJ19369 Drosophila mojavensis Dmoj\GI14313 Drosophila grimshawi Dgri\GH11835
Stocks & Reagents
Stocks Listed in FlyBase ( 19 )
Bloomington	15166 y1 P{SUPor-P}bvesKG09159 18417 w1118 PBac{WH}bvesf01200 22970 w1118 Mi{ET1}bvesMB01031
Harvard	- P{XP}bvesd02697 - PBac{RB}bvese00647 - PBac{WH}bvesf01175 - PBac{WH}bvesf01200 - PBac{WH}bvesf03650
Kyoto	123653 w1118 P{RS3}bvesCB-5486-3
VDRC	v104719 P{KK109205}VIE-260B v30894 w1118; P{GD5731}v30894 v8651 w1118; P{GD3702}v8651/TM3
	More stocks available...
Genomic Clones ( 1 )
	BACR35D19 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 140 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE59473 SD21670
Other clones	MIP32846
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT20840 GM07524 HL04034 LD22978 LD34851 LD43017 LP22417 RE31820 RE63869 RE63987 RE66803 RE74581
Other clones	34039 40095 40558 42387 45544 54489 56474 61325 73862 77960 98195 147473 156115 174716 190535 190916 191495 191745 214479.20 274185 274257 283115 CK01.1C.G1 CK01.25B.E4 CK01.40D.A10 CK01.74C.F9 EC24011 EK022550 EK042108 EK058621 EK148761 EK153647 EK154048 EK157324 EK161135 EK169518 EK180759 EK187160 EK212961 EK219107 EK221211 EK249956 EK258842 EK292609 EK292945 EK293147 EK294347 EK301842 EK301945 EK307944 EP10357 FGA007C12 RP003020813 RP003024453 RP003035088 RP003040166 RP003046259 RP003072973 RP003094634 RP003105872 RP003116872 RP003128806 RP003141868 RP003142830 RP003145105 RP003149621 RP003156334 RP003159799 RP003171089 RP003174416 RP003192051 RP003195513 RP003201588 RP003203865 RP003206200 RP003207272 RP003208846 RP003213228 RP003224111 RP003233717 RP003239433 RP003249665 RP003260330 RP003266991 RP003272240 RP003274572 RP003275580 RP003290789 RP003295295 RP003305684 RP003340454 RP003376769 RP003409014 RP003443161 RP003483268 RP003484253 RP003498277 RP003506385 RP003512973 RP003532288 RP003547591 RP003555574 RP003560272 RP003577342 RP003589394 RP003590911 RP003600372 RP003626109 RP003637546 RP003644014 RP003665361 RP003670253 RP004111307 RP004127996 RP004201573 RP004224817 RP004230477 RP004255799 RP004297647 RP004368282 RP004386258 RP004426399 RP004458850 RP004504856 RP004545389
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0031150 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33083
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: bves CG1754 (FlyBase, 1996-)
Source for database merge of	Source for merge of: bves BcDNA:SD21670 (FlyBase, 1996-) Source for merge of: bves CG15448 (FlyBase Genome Annotators, 2002-2003)
Additional comments	Annotations CG15448 and CG1754 merged as CG32513 in release 3 of the genome annotation. (FlyBase Genome Annotators, 2002-2003) Source for merge of bves BcDNA:SD21670 was a shared cDNA (date:030728). (FlyBase, 1996-) Source for identity of bves CG1754 was sequence comparison (date:001007). (FlyBase, 1996-)
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_134582 NM_206800 NM_001272823 NM_001272824 RefSeq (Proteins) • NP_608426 NP_996523 NP_001259752 NP_001259753 DDBJ / EMBL / GenBank • AAF50859 AAG18016 AAM29518 AAM51111 AAS65416 AF247183 AGB95590 AGB95591 AY113513 AY119251 BI372499 BI639180 CZ472949 CZ483658 CZ483659 CZ483892 CZ486224 Entrez Gene - A searchable database of RefSeq genes. • 33083 UniProtKB/TrEMBL • Q8MRV2 Q9VRE2
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Popeye protein (IPR006916) Cyclic nucleotide-binding-like (IPR018490) RmlC-like jelly roll fold (IPR014710) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • RE59473
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0031150 DRSC - Results from RNAi screens. • FBgn0031150 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031150 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG32513-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0031150 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33083 modMine - Data generated by the modENCODE project. • FBgn0031150
Synonyms & Secondary IDs ( 5 )
Reported As
Symbol Synonym	BcDNA:SD21670   bves (Lin et al., 2007, Lipatov et al., 2005, Qian and Bodmer, 2009, Japanese National Institute of Genetics, 2012.5.21) CG1754   CG15448   CG32513 (Keleman et al., 2009.8.5)
Name Synonym	bves (Lipatov et al., 2005)
Secondary FlyBase IDs
	FBgn0031153 FBgn0052513 FBgn0062860
References ( 24 )
Generate a list of	All references relating to this gene ( 24 )
List References by type	Research paper  ( 4 ) Supplementary material  ( 4 ) Personal communication to FlyBase  ( 8 ) Abstract  ( 1 ) FlyBase analysis  ( 4 ) Stock list  ( 1 ) Curated genome annotation  ( 1 ) DNA/RNA sequence record  ( 1 )
Recent research papers (0)
	All research papers listed in FlyBase were published before 2011 Show research papers ...