A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\CG4164

General Information
SymbolDmel\CG4164SpeciesD. melanogaster
NameAnnotation symbolCG4164
Feature typeprotein_coding_geneFlyBase IDFBgn0031256
Gene Model StatusCurrent Stock availability 5 publicly available
Genomic Location
Chromosome (arm)2LRecombination map
Cytogenetic map21C2-21C2Sequence location2L:453,111..454,654 [+]

Genomic Maps

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modENCODE GBrowse
detailed view
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Automatically generated summary

See sections below for more information
This gene is referred to in FlyBase by the symbol Dmel\CG4164 (FBgn0031256). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: heat shock protein binding; unfolded protein binding. Based on sequence similarity, it is predicted to be involved in the biological process: response to heat. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Chaperone DnaJ, C-terminal; HSP40/DnaJ peptide-binding; Heat shock protein DnaJ; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, conserved site. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages, during early larval stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult heart, larval/adult salivary gland, virgin spermatheca, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, larval/adult fat body, larval trachea, adult female reproductive system, adult testis, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1637650_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG4164. Gene sequence location is 2L:453111..454654.

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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
Controlled Vocabulary Terms
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
21C2-21C2  
Limits computationally determined from genome sequence between P{lacW}l(2)k09610k09610&P{lacW}Sk09538a and P{PZ}l(2)1068510685&P{lacW}Tango14k00619  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\CG4164 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0304741 FBtr0078088 FBtr0078087 FBtr0078060 FBtr0305350 FBtr0078061 FBpp0077720 FBpp0077721 FBti0108079 FBti0052438 FBti0065070 FBti0049128 FBti0065721 FBti0043881 FBti0057915 FBti0067413 FBti0024166 FBti0035278 FBti0100850 FBti0043198 FBti0024256
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0078060
  1485
  354
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0077720  
40.2  
354  
5.36  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view crq-RB crq-RA CG4164-RA CR43080-RB CG4133-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0031256


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0031256
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages, during early larval stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0031256 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 4359
embryo 02-04hr
 
 6823
embryo 04-06hr
 
 5228
embryo 06-08hr
 
 6011
embryo 08-10hr
 
 5953
embryo 10-12hr
 
 6268
embryo 12-14hr
 
 4696
embryo 14-16hr
 
 3372
embryo 16-18hr
 
 2783
embryo 18-20hr
 
 2036
embryo 20-22hr
 
 1589
embryo 22-24hr
 
 1402
larva L1
 
 2418
larva L2
 
 4941
larva L3 12hr old
 
 3113
larva L3 puffstage 1-2
 
 1940
larva L3 puffstage 3-6
 
 2397
larva L3 puffstage 7-9
 
 2670
white prepupae new
 
 3526
white prepupae 12hr
 
 1952
white prepupae 24hr
 
 2821
pupae 2d postWPP
 
 2517
pupae 3d postWPP
 
 1301
pupae 4d postWPP
 
 972
adult male 01day
 
 2150
adult male 05day
 
 2268
adult male 30day
 
 1989
adult female 01day
 
 1961
adult female 05day
 
 3182
adult female 30day
 
 3485
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4359)
embryo 02-04hr
 (6823)
embryo 04-06hr
 (5228)
embryo 06-08hr
 (6011)
embryo 08-10hr
 (5953)
embryo 10-12hr
 (6268)
embryo 12-14hr
 (4696)
embryo 14-16hr
 (3372)
embryo 16-18hr
 (2783)
embryo 18-20hr
 (2036)
embryo 20-22hr
 (1589)
embryo 22-24hr
 (1402)
larva L1
 (2418)
larva L2
 (4941)
larva L3 12hr old
 (3113)
larva L3 puffstage 1-2
 (1940)
larva L3 puffstage 3-6
 (2397)
larva L3 puffstage 7-9
 (2670)
white prepupae new
 (3526)
white prepupae 12hr
 (1952)
white prepupae 24hr
 (2821)
pupae 2d postWPP
 (2517)
pupae 3d postWPP
 (1301)
pupae 4d postWPP
 (972)
adult male 01day
 (2150)
adult male 05day
 (2268)
adult male 30day
 (1989)
adult female 01day
 (1961)
adult female 05day
 (3182)
adult female 30day
 (3485)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4359)
embryo 02-04hr
 (6823)
embryo 04-06hr
 (5228)
embryo 06-08hr
 (6011)
embryo 08-10hr
 (5953)
embryo 10-12hr
 (6268)
embryo 12-14hr
 (4696)
embryo 14-16hr
 (3372)
embryo 16-18hr
 (2783)
embryo 18-20hr
 (2036)
embryo 20-22hr
 (1589)
embryo 22-24hr
 1402
larva L1
 (2418)
larva L2
 (4941)
larva L3 12hr old
 (3113)
larva L3 puffstage 1-2
 (1940)
larva L3 puffstage 3-6
 (2397)
larva L3 puffstage 7-9
 (2670)
white prepupae new
 (3526)
white prepupae 12hr
 (1952)
white prepupae 24hr
 (2821)
pupae 2d postWPP
 (2517)
pupae 3d postWPP
 
 1301
pupae 4d postWPP
 
 972
adult male 01day
 (2150)
adult male 05day
 (2268)
adult male 30day
 (1989)
adult female 01day
 (1961)
adult female 05day
 (3182)
adult female 30day
 (3485)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4359
embryo 02-04hr
 
 6823
embryo 04-06hr
 
 5228
embryo 06-08hr
 
 6011
embryo 08-10hr
 
 5953
embryo 10-12hr
 
 6268
embryo 12-14hr
 
 4696
embryo 14-16hr
 
 3372
embryo 16-18hr
 
 2783
embryo 18-20hr
 
 2036
embryo 20-22hr
 
 1589
embryo 22-24hr
 
 1402
larva L1
 
 2418
larva L2
 
 4941
larva L3 12hr old
 
 3113
larva L3 puffstage 1-2
 
 1940
larva L3 puffstage 3-6
 
 2397
larva L3 puffstage 7-9
 
 2670
white prepupae new
 
 3526
white prepupae 12hr
 
 1952
white prepupae 24hr
 
 2821
pupae 2d postWPP
 
 2517
pupae 3d postWPP
 
 1301
pupae 4d postWPP
 
 972
adult male 01day
 
 2150
adult male 05day
 
 2268
adult male 30day
 
 1989
adult female 01day
 
 1961
adult female 05day
 
 3182
adult female 30day
 
 3485
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4359
embryo 02-04hr
 
 6823
embryo 04-06hr
 
 5228
embryo 06-08hr
 
 6011
embryo 08-10hr
 
 5953
embryo 10-12hr
 
 6268
embryo 12-14hr
 
 4696
embryo 14-16hr
 
 3372
embryo 16-18hr
 
 2783
embryo 18-20hr
 
 2036
embryo 20-22hr
 
 1589
embryo 22-24hr
 
 1402
larva L1
 
 2418
larva L2
 
 4941
larva L3 12hr old
 
 3113
larva L3 puffstage 1-2
 
 1940
larva L3 puffstage 3-6
 
 2397
larva L3 puffstage 7-9
 
 2670
white prepupae new
 
 3526
white prepupae 12hr
 
 1952
white prepupae 24hr
 
 2821
pupae 2d postWPP
 
 2517
pupae 3d postWPP
 
 1301
pupae 4d postWPP
 
 972
adult male 01day
 
 2150
adult male 05day
 
 2268
adult male 30day
 
 1989
adult female 01day
 
 1961
adult female 05day
 
 3182
adult female 30day
 
 3485
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0031256 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 4359
embryo 02-04hr
 
 6823
embryo 04-06hr
 
 5228
embryo 06-08hr
 
 6011
embryo 08-10hr
 
 5953
embryo 10-12hr
 
 6268
embryo 12-14hr
 
 4696
embryo 14-16hr
 
 3372
embryo 16-18hr
 
 2783
embryo 18-20hr
 
 2036
embryo 20-22hr
 
 1589
embryo 22-24hr
 
 1402
larva L1
 
 2418
larva L2
 
 4941
larva L3 12hr old
 
 3113
larva L3 puffstage 1-2
 
 1940
larva L3 puffstage 3-6
 
 2397
larva L3 puffstage 7-9
 
 2670
white prepupae new
 
 3526
white prepupae 12hr
 
 1952
white prepupae 24hr
 
 2821
pupae 2d postWPP
 
 2517
pupae 3d postWPP
 
 1301
pupae 4d postWPP
 
 972
adult male 01day
 
 2150
adult male 05day
 
 2268
adult male 30day
 
 1989
adult female 01day
 
 1961
adult female 05day
 
 3182
adult female 30day
 
 3485
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4359)
embryo 02-04hr
 (6823)
embryo 04-06hr
 (5228)
embryo 06-08hr
 (6011)
embryo 08-10hr
 (5953)
embryo 10-12hr
 (6268)
embryo 12-14hr
 (4696)
embryo 14-16hr
 (3372)
embryo 16-18hr
 (2783)
embryo 18-20hr
 (2036)
embryo 20-22hr
 (1589)
embryo 22-24hr
 (1402)
larva L1
 (2418)
larva L2
 (4941)
larva L3 12hr old
 (3113)
larva L3 puffstage 1-2
 (1940)
larva L3 puffstage 3-6
 (2397)
larva L3 puffstage 7-9
 (2670)
white prepupae new
 (3526)
white prepupae 12hr
 (1952)
white prepupae 24hr
 (2821)
pupae 2d postWPP
 (2517)
pupae 3d postWPP
 (1301)
pupae 4d postWPP
 (972)
adult male 01day
 (2150)
adult male 05day
 (2268)
adult male 30day
 (1989)
adult female 01day
 (1961)
adult female 05day
 (3182)
adult female 30day
 (3485)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (4359)
embryo 02-04hr
 (6823)
embryo 04-06hr
 (5228)
embryo 06-08hr
 (6011)
embryo 08-10hr
 (5953)
embryo 10-12hr
 (6268)
embryo 12-14hr
 (4696)
embryo 14-16hr
 (3372)
embryo 16-18hr
 (2783)
embryo 18-20hr
 2036
embryo 20-22hr
 1589
embryo 22-24hr
 1402
larva L1
 2418
larva L2
 (4941)
larva L3 12hr old
 (3113)
larva L3 puffstage 1-2
 1940
larva L3 puffstage 3-6
 2397
larva L3 puffstage 7-9
 (2670)
white prepupae new
 (3526)
white prepupae 12hr
 1952
white prepupae 24hr
 (2821)
pupae 2d postWPP
 (2517)
pupae 3d postWPP
 
 1301
pupae 4d postWPP
 
 972
adult male 01day
 2150
adult male 05day
 2268
adult male 30day
 1989
adult female 01day
 1961
adult female 05day
 (3182)
adult female 30day
 (3485)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4359
embryo 02-04hr
 
 6823
embryo 04-06hr
 
 5228
embryo 06-08hr
 
 6011
embryo 08-10hr
 
 5953
embryo 10-12hr
 
 6268
embryo 12-14hr
 
 4696
embryo 14-16hr
 
 3372
embryo 16-18hr
 
 2783
embryo 18-20hr
 
 2036
embryo 20-22hr
 
 1589
embryo 22-24hr
 
 1402
larva L1
 
 2418
larva L2
 
 4941
larva L3 12hr old
 
 3113
larva L3 puffstage 1-2
 
 1940
larva L3 puffstage 3-6
 
 2397
larva L3 puffstage 7-9
 
 2670
white prepupae new
 
 3526
white prepupae 12hr
 
 1952
white prepupae 24hr
 
 2821
pupae 2d postWPP
 
 2517
pupae 3d postWPP
 
 1301
pupae 4d postWPP
 
 972
adult male 01day
 
 2150
adult male 05day
 
 2268
adult male 30day
 
 1989
adult female 01day
 
 1961
adult female 05day
 
 3182
adult female 30day
 
 3485
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4359
embryo 02-04hr
 
 6823
embryo 04-06hr
 
 5228
embryo 06-08hr
 
 6011
embryo 08-10hr
 
 5953
embryo 10-12hr
 
 6268
embryo 12-14hr
 
 4696
embryo 14-16hr
 
 3372
embryo 16-18hr
 
 2783
embryo 18-20hr
 
 2036
embryo 20-22hr
 
 1589
embryo 22-24hr
 
 1402
larva L1
 
 2418
larva L2
 
 4941
larva L3 12hr old
 
 3113
larva L3 puffstage 1-2
 
 1940
larva L3 puffstage 3-6
 
 2397
larva L3 puffstage 7-9
 
 2670
white prepupae new
 
 3526
white prepupae 12hr
 
 1952
white prepupae 24hr
 
 2821
pupae 2d postWPP
 
 2517
pupae 3d postWPP
 
 1301
pupae 4d postWPP
 
 972
adult male 01day
 
 2150
adult male 05day
 
 2268
adult male 30day
 
 1989
adult female 01day
 
 1961
adult female 05day
 
 3182
adult female 30day
 
 3485
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0031256


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0031256
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult heart, larval/adult salivary gland, virgin spermatheca, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, larval/adult fat body, larval trachea, adult female reproductive system, adult testis, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0031256 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 300.175
Larval Midgut
 
 326.2
Larval Hindgut
 
 245.7
Larval Malpighian Tubules
 
 439.7
Larval Fat Body
 
 296.2
Larval Salivary Gland
 
 1323.3
Larval Trachea
 
 299.975
Larval Carcass
 
 299.275
Adult Head
 
 249.5
Adult Eye
 
 239.825
Adult Brain
 
 166.4
Adult Thoracic-Abdominal Ganglion
 
 171.1
Adult Crop
 
 247.8
Adult Midgut
 
 346.2
Adult Hindgut
 
 142
Adult Malpighian Tubules
 
 213.5
Adult Fat Body
 
 476.3
Adult Salivary Gland
 
 587.1
Adult Heart
 
 547.725
Adult VirginFemale Spermatheca
 
 522.5
Adult InseminatedFemale Spermatheca
 
 490.2
Adult Ovary
 
 376.6
Adult Testis
 
 175.3
Adult Male Accessory Gland
 
 1160.3
Adult Carcass
 
 287.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 300.175
Larval Midgut
 
 326.2
Larval Hindgut
 
 245.7
Larval Malpighian Tubules
 
 439.7
Larval Fat Body
 
 296.2
Larval Salivary Gland
 (1323.3)
Larval Trachea
 
 299.975
Larval Carcass
 
 299.275
Adult Head
 
 249.5
Adult Eye
 
 239.825
Adult Brain
 
 166.4
Adult Thoracic-Abdominal Ganglion
 
 171.1
Adult Crop
 
 247.8
Adult Midgut
 
 346.2
Adult Hindgut
 
 142
Adult Malpighian Tubules
 
 213.5
Adult Fat Body
 
 476.3
Adult Salivary Gland
 (587.1)
Adult Heart
 (547.725)
Adult VirginFemale Spermatheca
 522.5
Adult InseminatedFemale Spermatheca
 
 490.2
Adult Ovary
 
 376.6
Adult Testis
 
 175.3
Adult Male Accessory Gland
 (1160.3)
Adult Carcass
 
 287.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 300.175
Larval Midgut
 
 326.2
Larval Hindgut
 
 245.7
Larval Malpighian Tubules
 
 439.7
Larval Fat Body
 
 296.2
Larval Salivary Gland
 (1323.3)
Larval Trachea
 
 299.975
Larval Carcass
 
 299.275
Adult Head
 
 249.5
Adult Eye
 
 239.825
Adult Brain
 
 166.4
Adult Thoracic-Abdominal Ganglion
 
 171.1
Adult Crop
 
 247.8
Adult Midgut
 
 346.2
Adult Hindgut
 
 142
Adult Malpighian Tubules
 
 213.5
Adult Fat Body
 
 476.3
Adult Salivary Gland
 
 587.1
Adult Heart
 
 547.725
Adult VirginFemale Spermatheca
 
 522.5
Adult InseminatedFemale Spermatheca
 
 490.2
Adult Ovary
 
 376.6
Adult Testis
 
 175.3
Adult Male Accessory Gland
 (1160.3)
Adult Carcass
 
 287.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 300.175
Larval Midgut
 
 326.2
Larval Hindgut
 
 245.7
Larval Malpighian Tubules
 
 439.7
Larval Fat Body
 
 296.2
Larval Salivary Gland
 
 1323.3
Larval Trachea
 
 299.975
Larval Carcass
 
 299.275
Adult Head
 
 249.5
Adult Eye
 
 239.825
Adult Brain
 
 166.4
Adult Thoracic-Abdominal Ganglion
 
 171.1
Adult Crop
 
 247.8
Adult Midgut
 
 346.2
Adult Hindgut
 
 142
Adult Malpighian Tubules
 
 213.5
Adult Fat Body
 
 476.3
Adult Salivary Gland
 
 587.1
Adult Heart
 
 547.725
Adult VirginFemale Spermatheca
 
 522.5
Adult InseminatedFemale Spermatheca
 
 490.2
Adult Ovary
 
 376.6
Adult Testis
 
 175.3
Adult Male Accessory Gland
 
 1160.3
Adult Carcass
 
 287.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0031256 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 300.175
Larval Midgut
 
 326.2
Larval Hindgut
 
 245.7
Larval Malpighian Tubules
 
 439.7
Larval Fat Body
 
 296.2
Larval Salivary Gland
 
 1323.3
Larval Trachea
 
 299.975
Larval Carcass
 
 299.275
Adult Head
 
 249.5
Adult Eye
 
 239.825
Adult Brain
 
 166.4
Adult Thoracic-Abdominal Ganglion
 
 171.1
Adult Crop
 
 247.8
Adult Midgut
 
 346.2
Adult Hindgut
 
 142
Adult Malpighian Tubules
 
 213.5
Adult Fat Body
 
 476.3
Adult Salivary Gland
 
 587.1
Adult Heart
 
 547.725
Adult VirginFemale Spermatheca
 
 522.5
Adult InseminatedFemale Spermatheca
 
 490.2
Adult Ovary
 
 376.6
Adult Testis
 
 175.3
Adult Male Accessory Gland
 
 1160.3
Adult Carcass
 
 287.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 300.175
Larval Midgut
 
 326.2
Larval Hindgut
 
 245.7
Larval Malpighian Tubules
 
 439.7
Larval Fat Body
 
 296.2
Larval Salivary Gland
 (1323.3)
Larval Trachea
 
 299.975
Larval Carcass
 
 299.275
Adult Head
 
 249.5
Adult Eye
 
 239.825
Adult Brain
 
 166.4
Adult Thoracic-Abdominal Ganglion
 
 171.1
Adult Crop
 
 247.8
Adult Midgut
 
 346.2
Adult Hindgut
 
 142
Adult Malpighian Tubules
 
 213.5
Adult Fat Body
 
 476.3
Adult Salivary Gland
 587.1
Adult Heart
 547.725
Adult VirginFemale Spermatheca
 522.5
Adult InseminatedFemale Spermatheca
 
 490.2
Adult Ovary
 
 376.6
Adult Testis
 
 175.3
Adult Male Accessory Gland
 (1160.3)
Adult Carcass
 
 287.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 300.175
Larval Midgut
 
 326.2
Larval Hindgut
 
 245.7
Larval Malpighian Tubules
 
 439.7
Larval Fat Body
 
 296.2
Larval Salivary Gland
 1323.3
Larval Trachea
 
 299.975
Larval Carcass
 
 299.275
Adult Head
 
 249.5
Adult Eye
 
 239.825
Adult Brain
 
 166.4
Adult Thoracic-Abdominal Ganglion
 
 171.1
Adult Crop
 
 247.8
Adult Midgut
 
 346.2
Adult Hindgut
 
 142
Adult Malpighian Tubules
 
 213.5
Adult Fat Body
 
 476.3
Adult Salivary Gland
 
 587.1
Adult Heart
 
 547.725
Adult VirginFemale Spermatheca
 
 522.5
Adult InseminatedFemale Spermatheca
 
 490.2
Adult Ovary
 
 376.6
Adult Testis
 
 175.3
Adult Male Accessory Gland
 1160.3
Adult Carcass
 
 287.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 300.175
Larval Midgut
 
 326.2
Larval Hindgut
 
 245.7
Larval Malpighian Tubules
 
 439.7
Larval Fat Body
 
 296.2
Larval Salivary Gland
 
 1323.3
Larval Trachea
 
 299.975
Larval Carcass
 
 299.275
Adult Head
 
 249.5
Adult Eye
 
 239.825
Adult Brain
 
 166.4
Adult Thoracic-Abdominal Ganglion
 
 171.1
Adult Crop
 
 247.8
Adult Midgut
 
 346.2
Adult Hindgut
 
 142
Adult Malpighian Tubules
 
 213.5
Adult Fat Body
 
 476.3
Adult Salivary Gland
 
 587.1
Adult Heart
 
 547.725
Adult VirginFemale Spermatheca
 
 522.5
Adult InseminatedFemale Spermatheca
 
 490.2
Adult Ovary
 
 376.6
Adult Testis
 
 175.3
Adult Male Accessory Gland
 
 1160.3
Adult Carcass
 
 287.7
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 249.5
 
NA 
Eye
 
 239.825
 
NA 
Brain
 
 166.4
 
300.175 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 171.1
 
NA 
Crop
 
 247.8
 
326.2 
Midgut
 
 346.2
 
245.7 
Hindgut
 
 142
 
439.7 
Malpighian Tubules
 
 213.5
 
296.2 
Fat Body
 
 476.3
 
1323.3 
Salivary Gland
 
 587.1
 
NA 
Heart
 
 547.725
 
299.975 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 522.5
 
NA 
InseminatedFemale Spermatheca
 
 490.2
 
NA 
Ovary
 
 376.6
 
NA 
Testis
 
 175.3
 
NA 
Male Accessory Gland
 
 1160.3
 
299.275 
Carcass
 
 287.7

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyExpress - Embryonic expression images (BDGP data)
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 2 )
For All Classical Alleles Show

Allele of CG4164ClassMutagenStocksKnown lesion
CG416402
1 Yes
CG4164c004961 --
hide Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show

Allele of CG4164ClassMutagenStocksKnown lesion
CG4164GD127852 Yes
CG4164KK1013641 Yes
hide Aneuploid Aberrations
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Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
hide Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
hide Terms Based on Experimental Evidence ( 0 terms )
hide Terms Based on Predictions or Assertions ( 4 terms )
Molecular Function
CV term
References
Biological Process
CV term
References
inferred from sequence or structural similarity with EMBL:AF088983
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
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Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
CG4164 allele
Gene
References
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Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
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hide Stocks Listed in FlyBase ( 5 )
Bloomington
Harvard
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 61 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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Source for database identity of
Source for database merge of
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Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
BioGRID - A database of protein and genetic interactions
DPiM - DPiM, Drosophila Protein interaction Map
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
Name Synonym
Secondary FlyBase IDs
hide References ( 17 )
Research paper
Blanco et al., 2010, BMC Dev. Biol. 10: 94
Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812]
Juhasz et al., 2007, Cell Death Diffn:
Gene expression profiling identifies FKBP39 as an inhibitor of autophagy in larval Drosophila fat body. [FBrf0194904]
Supplementary material
Cammarato et al., 2011, PLoS ONE 6(4):
Table S1. Proteins & Peptides. [FBrf0214682]
The modENCODE Consortium, 2010, Science 330(6012):
DataS14: Gene co-expression clusters. [FBrf0213979]
Mummery-Widmer et al., 2009, Nature 458(7241):
Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Zhang et al., 2007, Genetics 176(2):
Supplement to Zhang et al., 2007. [FBrf0203184]
Hollien and Weissman, 2006, Science 313(5783):
[FBrf0199122]
Giot et al., 2003, Science 302(5651):
Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase
Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center
RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510]
Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center
RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms.
Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation
FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.]
[Annotations performed at the Celera Jamboreee.] [FBrf0126705]