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Gene Dmel\CG2975

General Information
Symbol	Dmel\CG2975	Species	D. melanogaster
Name		Annotation symbol	CG2975
Feature type	protein_coding_gene	FlyBase ID	FBgn0031468
Gene Model Status	Current	Stock availability	2 publicly available
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	23B4-23B4	Sequence location	2L:2,840,124..2,842,638 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG2975 (FBgn0031468). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: beta-1,3-galactosyltransferase activity. There is experimental evidence that it is involved in the biological process: protein glycosylation. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Fringe-like. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of no expression detected. Peak expression observed within 12-24 hour embryonic stages, during early pupal stages, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: larval hindgut. Comments on Affy2 ProbeSet: ProbeSet 1633410_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG2975. Gene sequence location is 2L:2840124..2842638.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Controlled Vocabulary Terms nurse cell larval stage female embryonic/larval proventriculus adult stage Sequence features BKN31983 HFA00556 Unknown in situ
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 23B4-23B4   Limits computationally determined from genome sequence between P{EP}EP832 and P{PZ}oho23B03575
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG2975 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG2975-RA FBtr0077619  NM_134875   1884   385
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG2975-PA   FBpp0077305   44.6   385   10.33     NP_608719   AAF51197
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Fringe-like (IPR003378)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014134 AAF51197   BT023131   BZ665610   CA803194   CA803448   CA807527   CO341185   EC064017   EC255931   EL881143
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VQH6
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference larval stage   embryonic/larval proventriculus   (Lin et al., 2008) adult stage | female   nurse cell   (Lin et al., 2008)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0031468    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0031468 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of no expression detected. Peak expression observed within 12-24 hour embryonic stages, during early pupal stages, in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0031468 expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    0 embryo 06-08hr    11 embryo 08-10hr    16 embryo 10-12hr    61 embryo 12-14hr    49 embryo 14-16hr    160 embryo 16-18hr    542 embryo 18-20hr    671 embryo 20-22hr    356 embryo 22-24hr    409 larva L1    94 larva L2    87 larva L3 12hr old    63 larva L3 puffstage 1-2    91 larva L3 puffstage 3-6    282 larva L3 puffstage 7-9    387 white prepupae new    237 white prepupae 12hr    613 white prepupae 24hr    289 pupae 2d postWPP    130 pupae 3d postWPP    293 pupae 4d postWPP    108 adult male 01day    293 adult male 05day    434 adult male 30day    533 adult female 01day    21 adult female 05day    6 adult female 30day    2 Expression Level Scale  None   Extremely low   Very low   Low   Moderate  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    0 embryo 06-08hr    11 embryo 08-10hr    16 embryo 10-12hr    61 embryo 12-14hr    49 embryo 14-16hr  (160) embryo 16-18hr  (542) embryo 18-20hr  (671) embryo 20-22hr  (356) embryo 22-24hr  (409) larva L1    94 larva L2    87 larva L3 12hr old    63 larva L3 puffstage 1-2    91 larva L3 puffstage 3-6  (282) larva L3 puffstage 7-9  (387) white prepupae new  (237) white prepupae 12hr  (613) white prepupae 24hr  (289) pupae 2d postWPP  (130) pupae 3d postWPP  (293) pupae 4d postWPP  (108) adult male 01day  (293) adult male 05day  (434) adult male 30day  (533) adult female 01day    21 adult female 05day    6 adult female 30day    2 Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    0 embryo 06-08hr    11 embryo 08-10hr    16 embryo 10-12hr    61 embryo 12-14hr    49 embryo 14-16hr    160 embryo 16-18hr    542 embryo 18-20hr    671 embryo 20-22hr    356 embryo 22-24hr    409 larva L1    94 larva L2    87 larva L3 12hr old    63 larva L3 puffstage 1-2    91 larva L3 puffstage 3-6    282 larva L3 puffstage 7-9    387 white prepupae new    237 white prepupae 12hr    613 white prepupae 24hr    289 pupae 2d postWPP    130 pupae 3d postWPP    293 pupae 4d postWPP    108 adult male 01day    293 adult male 05day    434 adult male 30day    533 adult female 01day    21 adult female 05day    6 adult female 30day    2 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    0 embryo 06-08hr    11 embryo 08-10hr    16 embryo 10-12hr    61 embryo 12-14hr    49 embryo 14-16hr    160 embryo 16-18hr    542 embryo 18-20hr    671 embryo 20-22hr    356 embryo 22-24hr    409 larva L1    94 larva L2    87 larva L3 12hr old    63 larva L3 puffstage 1-2    91 larva L3 puffstage 3-6    282 larva L3 puffstage 7-9    387 white prepupae new    237 white prepupae 12hr    613 white prepupae 24hr    289 pupae 2d postWPP    130 pupae 3d postWPP    293 pupae 4d postWPP    108 adult male 01day    293 adult male 05day    434 adult male 30day    533 adult female 01day    21 adult female 05day    6 adult female 30day    2 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    0 embryo 06-08hr    11 embryo 08-10hr    16 embryo 10-12hr    61 embryo 12-14hr    49 embryo 14-16hr    160 embryo 16-18hr    542 embryo 18-20hr    671 embryo 20-22hr    356 embryo 22-24hr    409 larva L1    94 larva L2    87 larva L3 12hr old    63 larva L3 puffstage 1-2    91 larva L3 puffstage 3-6    282 larva L3 puffstage 7-9    387 white prepupae new    237 white prepupae 12hr    613 white prepupae 24hr    289 pupae 2d postWPP    130 pupae 3d postWPP    293 pupae 4d postWPP    108 adult male 01day    293 adult male 05day    434 adult male 30day    533 adult female 01day    21 adult female 05day    6 adult female 30day    2 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0031468 expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    0 embryo 06-08hr    11 embryo 08-10hr    16 embryo 10-12hr    61 embryo 12-14hr    49 embryo 14-16hr    160 embryo 16-18hr    542 embryo 18-20hr    671 embryo 20-22hr    356 embryo 22-24hr    409 larva L1    94 larva L2    87 larva L3 12hr old    63 larva L3 puffstage 1-2    91 larva L3 puffstage 3-6    282 larva L3 puffstage 7-9    387 white prepupae new    237 white prepupae 12hr    613 white prepupae 24hr    289 pupae 2d postWPP    130 pupae 3d postWPP    293 pupae 4d postWPP    108 adult male 01day    293 adult male 05day    434 adult male 30day    533 adult female 01day    21 adult female 05day    6 adult female 30day    2 Expression Level Scale  None   Extremely low   Very low   Low   Moderate  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    0 embryo 06-08hr    11 embryo 08-10hr    16 embryo 10-12hr    61 embryo 12-14hr    49 embryo 14-16hr  (160) embryo 16-18hr  (542) embryo 18-20hr  (671) embryo 20-22hr  (356) embryo 22-24hr  (409) larva L1    94 larva L2    87 larva L3 12hr old    63 larva L3 puffstage 1-2    91 larva L3 puffstage 3-6  (282) larva L3 puffstage 7-9  (387) white prepupae new  (237) white prepupae 12hr  (613) white prepupae 24hr  (289) pupae 2d postWPP  130 pupae 3d postWPP  (293) pupae 4d postWPP  108 adult male 01day  (293) adult male 05day  (434) adult male 30day  (533) adult female 01day    21 adult female 05day    6 adult female 30day    2 Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    0 embryo 06-08hr    11 embryo 08-10hr    16 embryo 10-12hr    61 embryo 12-14hr    49 embryo 14-16hr    160 embryo 16-18hr    542 embryo 18-20hr    671 embryo 20-22hr    356 embryo 22-24hr    409 larva L1    94 larva L2    87 larva L3 12hr old    63 larva L3 puffstage 1-2    91 larva L3 puffstage 3-6    282 larva L3 puffstage 7-9    387 white prepupae new    237 white prepupae 12hr    613 white prepupae 24hr    289 pupae 2d postWPP    130 pupae 3d postWPP    293 pupae 4d postWPP    108 adult male 01day    293 adult male 05day    434 adult male 30day    533 adult female 01day    21 adult female 05day    6 adult female 30day    2 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    0 embryo 06-08hr    11 embryo 08-10hr    16 embryo 10-12hr    61 embryo 12-14hr    49 embryo 14-16hr    160 embryo 16-18hr    542 embryo 18-20hr    671 embryo 20-22hr    356 embryo 22-24hr    409 larva L1    94 larva L2    87 larva L3 12hr old    63 larva L3 puffstage 1-2    91 larva L3 puffstage 3-6    282 larva L3 puffstage 7-9    387 white prepupae new    237 white prepupae 12hr    613 white prepupae 24hr    289 pupae 2d postWPP    130 pupae 3d postWPP    293 pupae 4d postWPP    108 adult male 01day    293 adult male 05day    434 adult male 30day    533 adult female 01day    21 adult female 05day    6 adult female 30day    2 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    1 embryo 04-06hr    0 embryo 06-08hr    11 embryo 08-10hr    16 embryo 10-12hr    61 embryo 12-14hr    49 embryo 14-16hr    160 embryo 16-18hr    542 embryo 18-20hr    671 embryo 20-22hr    356 embryo 22-24hr    409 larva L1    94 larva L2    87 larva L3 12hr old    63 larva L3 puffstage 1-2    91 larva L3 puffstage 3-6    282 larva L3 puffstage 7-9    387 white prepupae new    237 white prepupae 12hr    613 white prepupae 24hr    289 pupae 2d postWPP    130 pupae 3d postWPP    293 pupae 4d postWPP    108 adult male 01day    293 adult male 05day    434 adult male 30day    533 adult female 01day    21 adult female 05day    6 adult female 30day    2 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0031468    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0031468 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: larval hindgut. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0031468 expression level Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    120.6 Larval Malpighian Tubules no informative data Larval Fat Body    9.4 Larval Salivary Gland    72.1 Larval Trachea    68.375 Larval Carcass no informative data Adult Head no informative data Adult Eye    4.225 Adult Brain    6.4 Adult Thoracic-Abdominal Ganglion    6.5 Adult Crop    92.4 Adult Midgut no informative data Adult Hindgut    43 Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    1.95 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    4.2 Adult Testis    14.1 Adult Male Accessory Gland    1345.8 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    120.6 Larval Malpighian Tubules no informative data Larval Fat Body    9.4 Larval Salivary Gland    72.1 Larval Trachea    68.375 Larval Carcass no informative data Adult Head no informative data Adult Eye    4.225 Adult Brain    6.4 Adult Thoracic-Abdominal Ganglion    6.5 Adult Crop    92.4 Adult Midgut no informative data Adult Hindgut    43 Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    1.95 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    4.2 Adult Testis    14.1 Adult Male Accessory Gland  (1345.8) Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    120.6 Larval Malpighian Tubules no informative data Larval Fat Body    9.4 Larval Salivary Gland    72.1 Larval Trachea    68.375 Larval Carcass no informative data Adult Head no informative data Adult Eye    4.225 Adult Brain    6.4 Adult Thoracic-Abdominal Ganglion    6.5 Adult Crop    92.4 Adult Midgut no informative data Adult Hindgut    43 Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    1.95 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    4.2 Adult Testis    14.1 Adult Male Accessory Gland  (1345.8) Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    120.6 Larval Malpighian Tubules no informative data Larval Fat Body    9.4 Larval Salivary Gland    72.1 Larval Trachea    68.375 Larval Carcass no informative data Adult Head no informative data Adult Eye    4.225 Adult Brain    6.4 Adult Thoracic-Abdominal Ganglion    6.5 Adult Crop    92.4 Adult Midgut no informative data Adult Hindgut    43 Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    1.95 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    4.2 Adult Testis    14.1 Adult Male Accessory Gland    1345.8 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0031468 expression level Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    120.6 Larval Malpighian Tubules no informative data Larval Fat Body    9.4 Larval Salivary Gland    72.1 Larval Trachea    68.375 Larval Carcass no informative data Adult Head no informative data Adult Eye    4.225 Adult Brain    6.4 Adult Thoracic-Abdominal Ganglion    6.5 Adult Crop    92.4 Adult Midgut no informative data Adult Hindgut    43 Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    1.95 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    4.2 Adult Testis    14.1 Adult Male Accessory Gland    1345.8 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    120.6 Larval Malpighian Tubules no informative data Larval Fat Body    9.4 Larval Salivary Gland    72.1 Larval Trachea    68.375 Larval Carcass no informative data Adult Head no informative data Adult Eye    4.225 Adult Brain    6.4 Adult Thoracic-Abdominal Ganglion    6.5 Adult Crop    92.4 Adult Midgut no informative data Adult Hindgut    43 Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    1.95 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    4.2 Adult Testis    14.1 Adult Male Accessory Gland  (1345.8) Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    120.6 Larval Malpighian Tubules no informative data Larval Fat Body    9.4 Larval Salivary Gland    72.1 Larval Trachea    68.375 Larval Carcass no informative data Adult Head no informative data Adult Eye    4.225 Adult Brain    6.4 Adult Thoracic-Abdominal Ganglion    6.5 Adult Crop    92.4 Adult Midgut no informative data Adult Hindgut    43 Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    1.95 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    4.2 Adult Testis    14.1 Adult Male Accessory Gland  1345.8 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut    120.6 Larval Malpighian Tubules no informative data Larval Fat Body    9.4 Larval Salivary Gland    72.1 Larval Trachea    68.375 Larval Carcass no informative data Adult Head no informative data Adult Eye    4.225 Adult Brain    6.4 Adult Thoracic-Abdominal Ganglion    6.5 Adult Crop    92.4 Adult Midgut no informative data Adult Hindgut    43 Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    1.95 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary    4.2 Adult Testis    14.1 Adult Male Accessory Gland    1345.8 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System no informative data Larval Midgut no informative data Larval Hindgut     Larval Malpighian Tubules no informative data Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass no informative data Adult Head no informative data Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut no informative data Adult Hindgut     Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca no informative data Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass no informative data FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    no informative data   NA  Eye    4.225   NA  Brain    6.4   no informative data  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    6.5   NA  Crop    92.4   no informative data  Midgut    no informative data   120.6  Hindgut    43   no informative data  Malpighian Tubules    no informative data   9.4  Fat Body    no informative data   72.1  Salivary Gland    no informative data   NA  Heart    1.95   68.375  Trachea    NA   NA  VirginFemale Spermatheca    no informative data   NA  InseminatedFemale Spermatheca    no informative data   NA  Ovary    4.2   NA  Testis    14.1   NA  Male Accessory Gland    1345.8   no informative data  Carcass    no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_24
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031468 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG2975-RA;CG4692-RB
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG2975GD847 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG2975 Class Mutagen Stocks Known lesion CG2975KG07842b P-element activity 1 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG2975 Class Mutagen Stocks Known lesion CG2975GD847 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel8006 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD847} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{SUPor-P}CG2975KG07842b NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 2 terms )
Molecular Function
CV term Evidence References
beta-1,3-galactosyltransferase activity inferred from direct assay (Mueller et al., 2005)
Biological Process
CV term Evidence References
protein glycosylation inferred from direct assay (Mueller et al., 2005)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
membrane inferred from electronic annotation with InterPro:IPR003378 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG2975 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 59704 DroID - A comprehensive database of gene and protein interactions. • FBgn0031468 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33481
Orthologs
Genome-wide drosophilid orthologs	Dana\GF14985 Dere\GG24890 Dper\GL15447 Dpse\GA28803 Dsec\GM18370 Dsim\GD23186 Dwil\GK24280 Dyak\GE18184
Curated drosophilid orthologs	Dpse\GA15550
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • 261140 Thalassiosira pseudonana (marine diatom) 262287 Thalassiosira pseudonana (marine diatom) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0235615 FBgn0226241 FBgn0194575 FBgn0173277 FBgn0250162 FBgn0153051 FBgn0117019 FBgn0092010
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
Bloomington	15120 y1; P{SUPor-P}CG9894KG07842a P{SUPor-P}CG2975KG07842b/In(2LR)Gla
VDRC	v2601 w1118; P{GD847}v2601
Genomic Clones ( 1 )
	BACR42J13 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 6 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	IP10850
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones	EP12015 ESG011a.E7.4_D09 ESG011a.E21_D09 ESG018b.E21.1_F01 IP10950
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0031468 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33481
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_134875 RefSeq (Proteins) • NP_608719 DDBJ / EMBL / GenBank • AAF51197 BZ665610 Entrez Gene - A searchable database of RefSeq genes. • 33481 UniProtKB/TrEMBL • Q9VQH6
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Fringe-like (IPR003378)
Linkouts
	BioGRID - A database of protein and genetic interactions • 59704 DroID - A comprehensive database of gene and protein interactions. • FBgn0031468 DRSC - Results from RNAi screens. • FBgn0031468 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031468 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG2975-RA;CG4692-RB FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0031468 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33481 InParanoid A subset of ortholog calls from InParanoid. • 261140 Thalassiosira pseudonana (marine diatom) 262287 Thalassiosira pseudonana (marine diatom) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33481 modMine - Data generated by the modENCODE project. • FBgn0031468 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0235615 FBgn0226241 FBgn0194575 FBgn0173277 FBgn0250162 FBgn0153051 FBgn0117019 FBgn0092010
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG2975 (Lin et al., 2008, Liu and Lehmann, 2008)
Name Synonym
Secondary FlyBase IDs
References ( 10 )
Research paper	Lin et al., 2008, Dev. Dyn. 237(12): 3703--3714 Requirement for a core 1 galactosyltransferase in the Drosophila nervous system. [FBrf0207265] Liu and Lehmann, 2008, Insect Molec. Biol. 17(2): 91--101 Genes and biological processes controlled by the Drosophila FOXA orthologue Fork head. [FBrf0204414] Mueller et al., 2005, FEBS J. 272(17): 4295--4305 Characterization of mucin-type core-1 beta 1-3 galactosyltransferase homologous enzymes in Drosophila melanogaster. [FBrf0190470]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
Computer file	Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177]