A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\CG8837

General Information
SymbolDmel\CG8837SpeciesD. melanogaster
NameAnnotation symbolCG8837
Feature typeprotein_coding_geneFlyBase IDFBgn0031520
Gene Model StatusCurrent Stock availability 4 publicly available
Genomic Location
Chromosome (arm)2LRecombination map
Cytogenetic map23E3-23E4Sequence location2L:3,320,255..3,323,141 [+]

Genomic Maps

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modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
This gene is referred to in FlyBase by the symbol Dmel\CG8837 (FBgn0031520). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: transmembrane transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: transmembrane transport. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: General substrate transporter; Major facilitator superfamily domain; Major facilitator superfamily domain, general substrate transporter; Sugar transporter, conserved site. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of no expression detected. Peak expression observed within 18-24 hour embryonic stages, during early larval stages, during late pupal stages, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: adult central nervous system, larval Malpighian tubules. Comments on Affy2 ProbeSet: ProbeSet 1626081_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG8837. Gene sequence location is 2L:3320255..3323141.

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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
23E3-23E4  
Limits computationally determined from genome sequence between P{lacW}Madk00237 and P{lacW}Pdswk10101  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\CG8837 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0077603 FBtr0077583 FBtr0077584 FBpp0077290 FBpp0077271 FBpp0077272 FBti0025910 FBti0027143 FBti0075618
Comments on Gene Model
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0077583
  1825
  485
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0077271  
52.9  
485  
8.66  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view CG3326-RA CG8837-RA
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0031520


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0031520
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of no expression detected. Peak expression observed within 18-24 hour embryonic stages, during early larval stages, during late pupal stages, in adult male stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0031520 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 4
embryo 02-04hr
 
 0
embryo 04-06hr
 
 3
embryo 06-08hr
 
 6
embryo 08-10hr
 
 8
embryo 10-12hr
 
 62
embryo 12-14hr
 
 55
embryo 14-16hr
 
 129
embryo 16-18hr
 
 206
embryo 18-20hr
 
 447
embryo 20-22hr
 
 1280
embryo 22-24hr
 
 1092
larva L1
 
 789
larva L2
 
 773
larva L3 12hr old
 
 552
larva L3 puffstage 1-2
 
 177
larva L3 puffstage 3-6
 
 95
larva L3 puffstage 7-9
 
 102
white prepupae new
 
 67
white prepupae 12hr
 
 219
white prepupae 24hr
 
 270
pupae 2d postWPP
 
 191
pupae 3d postWPP
 
 224
pupae 4d postWPP
 
 410
adult male 01day
 
 442
adult male 05day
 
 562
adult male 30day
 
 688
adult female 01day
 
 281
adult female 05day
 
 140
adult female 30day
 
 354
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4
embryo 02-04hr
 
 0
embryo 04-06hr
 
 3
embryo 06-08hr
 
 6
embryo 08-10hr
 
 8
embryo 10-12hr
 
 62
embryo 12-14hr
 
 55
embryo 14-16hr
 (129)
embryo 16-18hr
 (206)
embryo 18-20hr
 (447)
embryo 20-22hr
 (1280)
embryo 22-24hr
 (1092)
larva L1
 (789)
larva L2
 (773)
larva L3 12hr old
 (552)
larva L3 puffstage 1-2
 (177)
larva L3 puffstage 3-6
 
 95
larva L3 puffstage 7-9
 102
white prepupae new
 
 67
white prepupae 12hr
 (219)
white prepupae 24hr
 (270)
pupae 2d postWPP
 (191)
pupae 3d postWPP
 (224)
pupae 4d postWPP
 (410)
adult male 01day
 (442)
adult male 05day
 (562)
adult male 30day
 (688)
adult female 01day
 (281)
adult female 05day
 (140)
adult female 30day
 (354)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4
embryo 02-04hr
 
 0
embryo 04-06hr
 
 3
embryo 06-08hr
 
 6
embryo 08-10hr
 
 8
embryo 10-12hr
 
 62
embryo 12-14hr
 
 55
embryo 14-16hr
 
 129
embryo 16-18hr
 
 206
embryo 18-20hr
 
 447
embryo 20-22hr
 
 1280
embryo 22-24hr
 
 1092
larva L1
 
 789
larva L2
 
 773
larva L3 12hr old
 
 552
larva L3 puffstage 1-2
 
 177
larva L3 puffstage 3-6
 
 95
larva L3 puffstage 7-9
 
 102
white prepupae new
 
 67
white prepupae 12hr
 
 219
white prepupae 24hr
 
 270
pupae 2d postWPP
 
 191
pupae 3d postWPP
 
 224
pupae 4d postWPP
 
 410
adult male 01day
 
 442
adult male 05day
 
 562
adult male 30day
 
 688
adult female 01day
 
 281
adult female 05day
 
 140
adult female 30day
 
 354
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4
embryo 02-04hr
 
 0
embryo 04-06hr
 
 3
embryo 06-08hr
 
 6
embryo 08-10hr
 
 8
embryo 10-12hr
 
 62
embryo 12-14hr
 
 55
embryo 14-16hr
 
 129
embryo 16-18hr
 
 206
embryo 18-20hr
 
 447
embryo 20-22hr
 
 1280
embryo 22-24hr
 
 1092
larva L1
 
 789
larva L2
 
 773
larva L3 12hr old
 
 552
larva L3 puffstage 1-2
 
 177
larva L3 puffstage 3-6
 
 95
larva L3 puffstage 7-9
 
 102
white prepupae new
 
 67
white prepupae 12hr
 
 219
white prepupae 24hr
 
 270
pupae 2d postWPP
 
 191
pupae 3d postWPP
 
 224
pupae 4d postWPP
 
 410
adult male 01day
 
 442
adult male 05day
 
 562
adult male 30day
 
 688
adult female 01day
 
 281
adult female 05day
 
 140
adult female 30day
 
 354
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4
embryo 02-04hr
 
 0
embryo 04-06hr
 
 3
embryo 06-08hr
 
 6
embryo 08-10hr
 
 8
embryo 10-12hr
 
 62
embryo 12-14hr
 
 55
embryo 14-16hr
 
 129
embryo 16-18hr
 
 206
embryo 18-20hr
 
 447
embryo 20-22hr
 
 1280
embryo 22-24hr
 
 1092
larva L1
 
 789
larva L2
 
 773
larva L3 12hr old
 
 552
larva L3 puffstage 1-2
 
 177
larva L3 puffstage 3-6
 
 95
larva L3 puffstage 7-9
 
 102
white prepupae new
 
 67
white prepupae 12hr
 
 219
white prepupae 24hr
 
 270
pupae 2d postWPP
 
 191
pupae 3d postWPP
 
 224
pupae 4d postWPP
 
 410
adult male 01day
 
 442
adult male 05day
 
 562
adult male 30day
 
 688
adult female 01day
 
 281
adult female 05day
 
 140
adult female 30day
 
 354
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0031520 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 4
embryo 02-04hr
 
 0
embryo 04-06hr
 
 3
embryo 06-08hr
 
 6
embryo 08-10hr
 
 8
embryo 10-12hr
 
 62
embryo 12-14hr
 
 55
embryo 14-16hr
 
 129
embryo 16-18hr
 
 206
embryo 18-20hr
 
 447
embryo 20-22hr
 
 1280
embryo 22-24hr
 
 1092
larva L1
 
 789
larva L2
 
 773
larva L3 12hr old
 
 552
larva L3 puffstage 1-2
 
 177
larva L3 puffstage 3-6
 
 95
larva L3 puffstage 7-9
 
 102
white prepupae new
 
 67
white prepupae 12hr
 
 219
white prepupae 24hr
 
 270
pupae 2d postWPP
 
 191
pupae 3d postWPP
 
 224
pupae 4d postWPP
 
 410
adult male 01day
 
 442
adult male 05day
 
 562
adult male 30day
 
 688
adult female 01day
 
 281
adult female 05day
 
 140
adult female 30day
 
 354
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4
embryo 02-04hr
 
 0
embryo 04-06hr
 
 3
embryo 06-08hr
 
 6
embryo 08-10hr
 
 8
embryo 10-12hr
 
 62
embryo 12-14hr
 
 55
embryo 14-16hr
 129
embryo 16-18hr
 (206)
embryo 18-20hr
 (447)
embryo 20-22hr
 (1280)
embryo 22-24hr
 (1092)
larva L1
 (789)
larva L2
 (773)
larva L3 12hr old
 (552)
larva L3 puffstage 1-2
 (177)
larva L3 puffstage 3-6
 
 95
larva L3 puffstage 7-9
 102
white prepupae new
 
 67
white prepupae 12hr
 (219)
white prepupae 24hr
 (270)
pupae 2d postWPP
 (191)
pupae 3d postWPP
 (224)
pupae 4d postWPP
 (410)
adult male 01day
 (442)
adult male 05day
 (562)
adult male 30day
 (688)
adult female 01day
 (281)
adult female 05day
 140
adult female 30day
 (354)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4
embryo 02-04hr
 
 0
embryo 04-06hr
 
 3
embryo 06-08hr
 
 6
embryo 08-10hr
 
 8
embryo 10-12hr
 
 62
embryo 12-14hr
 
 55
embryo 14-16hr
 
 129
embryo 16-18hr
 
 206
embryo 18-20hr
 
 447
embryo 20-22hr
 
 1280
embryo 22-24hr
 
 1092
larva L1
 
 789
larva L2
 
 773
larva L3 12hr old
 
 552
larva L3 puffstage 1-2
 
 177
larva L3 puffstage 3-6
 
 95
larva L3 puffstage 7-9
 
 102
white prepupae new
 
 67
white prepupae 12hr
 
 219
white prepupae 24hr
 
 270
pupae 2d postWPP
 
 191
pupae 3d postWPP
 
 224
pupae 4d postWPP
 
 410
adult male 01day
 
 442
adult male 05day
 
 562
adult male 30day
 
 688
adult female 01day
 
 281
adult female 05day
 
 140
adult female 30day
 
 354
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4
embryo 02-04hr
 
 0
embryo 04-06hr
 
 3
embryo 06-08hr
 
 6
embryo 08-10hr
 
 8
embryo 10-12hr
 
 62
embryo 12-14hr
 
 55
embryo 14-16hr
 
 129
embryo 16-18hr
 
 206
embryo 18-20hr
 
 447
embryo 20-22hr
 
 1280
embryo 22-24hr
 
 1092
larva L1
 
 789
larva L2
 
 773
larva L3 12hr old
 
 552
larva L3 puffstage 1-2
 
 177
larva L3 puffstage 3-6
 
 95
larva L3 puffstage 7-9
 
 102
white prepupae new
 
 67
white prepupae 12hr
 
 219
white prepupae 24hr
 
 270
pupae 2d postWPP
 
 191
pupae 3d postWPP
 
 224
pupae 4d postWPP
 
 410
adult male 01day
 
 442
adult male 05day
 
 562
adult male 30day
 
 688
adult female 01day
 
 281
adult female 05day
 
 140
adult female 30day
 
 354
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 4
embryo 02-04hr
 
 0
embryo 04-06hr
 
 3
embryo 06-08hr
 
 6
embryo 08-10hr
 
 8
embryo 10-12hr
 
 62
embryo 12-14hr
 
 55
embryo 14-16hr
 
 129
embryo 16-18hr
 
 206
embryo 18-20hr
 
 447
embryo 20-22hr
 
 1280
embryo 22-24hr
 
 1092
larva L1
 
 789
larva L2
 
 773
larva L3 12hr old
 
 552
larva L3 puffstage 1-2
 
 177
larva L3 puffstage 3-6
 
 95
larva L3 puffstage 7-9
 
 102
white prepupae new
 
 67
white prepupae 12hr
 
 219
white prepupae 24hr
 
 270
pupae 2d postWPP
 
 191
pupae 3d postWPP
 
 224
pupae 4d postWPP
 
 410
adult male 01day
 
 442
adult male 05day
 
 562
adult male 30day
 
 688
adult female 01day
 
 281
adult female 05day
 
 140
adult female 30day
 
 354
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0031520


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0031520
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: adult central nervous system, larval Malpighian tubules.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0031520 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 32.625
Larval Midgut
 
 2.6
Larval Hindgut no informative data
Larval Malpighian Tubules
 
 214.9
Larval Fat Body
 
 7.2
Larval Salivary Gland
 
 1.9
Larval Trachea
 
 2.65
Larval Carcass
 
 5.5
Adult Head
 
 53.7
Adult Eye
 
 41.775
Adult Brain
 
 104.8
Adult Thoracic-Abdominal Ganglion
 
 125.1
Adult Crop
 
 2.7
Adult Midgut
 
 1.8
Adult Hindgut
 
 6.1
Adult Malpighian Tubules
 
 1088.9
Adult Fat Body
 
 8.6
Adult Salivary Gland no informative data
Adult Heart
 
 7.625
Adult VirginFemale Spermatheca
 
 5.1
Adult InseminatedFemale Spermatheca
 
 5.6
Adult Ovary
 
 1.5
Adult Testis
 
 36.7
Adult Male Accessory Gland
 
 9.6
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 32.625
Larval Midgut
 
 2.6
Larval Hindgut no informative data
Larval Malpighian Tubules
 
 214.9
Larval Fat Body
 
 7.2
Larval Salivary Gland
 
 1.9
Larval Trachea
 
 2.65
Larval Carcass
 
 5.5
Adult Head
 
 53.7
Adult Eye
 
 41.775
Adult Brain
 
 104.8
Adult Thoracic-Abdominal Ganglion
 
 125.1
Adult Crop
 
 2.7
Adult Midgut
 
 1.8
Adult Hindgut
 
 6.1
Adult Malpighian Tubules
 (1088.9)
Adult Fat Body
 
 8.6
Adult Salivary Gland no informative data
Adult Heart
 
 7.625
Adult VirginFemale Spermatheca
 
 5.1
Adult InseminatedFemale Spermatheca
 
 5.6
Adult Ovary
 
 1.5
Adult Testis
 
 36.7
Adult Male Accessory Gland
 
 9.6
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 32.625
Larval Midgut
 
 2.6
Larval Hindgut no informative data
Larval Malpighian Tubules
 
 214.9
Larval Fat Body
 
 7.2
Larval Salivary Gland
 
 1.9
Larval Trachea
 
 2.65
Larval Carcass
 
 5.5
Adult Head
 
 53.7
Adult Eye
 
 41.775
Adult Brain
 
 104.8
Adult Thoracic-Abdominal Ganglion
 
 125.1
Adult Crop
 
 2.7
Adult Midgut
 
 1.8
Adult Hindgut
 
 6.1
Adult Malpighian Tubules
 (1088.9)
Adult Fat Body
 
 8.6
Adult Salivary Gland no informative data
Adult Heart
 
 7.625
Adult VirginFemale Spermatheca
 
 5.1
Adult InseminatedFemale Spermatheca
 
 5.6
Adult Ovary
 
 1.5
Adult Testis
 
 36.7
Adult Male Accessory Gland
 
 9.6
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 32.625
Larval Midgut
 
 2.6
Larval Hindgut no informative data
Larval Malpighian Tubules
 
 214.9
Larval Fat Body
 
 7.2
Larval Salivary Gland
 
 1.9
Larval Trachea
 
 2.65
Larval Carcass
 
 5.5
Adult Head
 
 53.7
Adult Eye
 
 41.775
Adult Brain
 
 104.8
Adult Thoracic-Abdominal Ganglion
 
 125.1
Adult Crop
 
 2.7
Adult Midgut
 
 1.8
Adult Hindgut
 
 6.1
Adult Malpighian Tubules
 
 1088.9
Adult Fat Body
 
 8.6
Adult Salivary Gland no informative data
Adult Heart
 
 7.625
Adult VirginFemale Spermatheca
 
 5.1
Adult InseminatedFemale Spermatheca
 
 5.6
Adult Ovary
 
 1.5
Adult Testis
 
 36.7
Adult Male Accessory Gland
 
 9.6
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0031520 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 32.625
Larval Midgut
 
 2.6
Larval Hindgut no informative data
Larval Malpighian Tubules
 
 214.9
Larval Fat Body
 
 7.2
Larval Salivary Gland
 
 1.9
Larval Trachea
 
 2.65
Larval Carcass
 
 5.5
Adult Head
 
 53.7
Adult Eye
 
 41.775
Adult Brain
 
 104.8
Adult Thoracic-Abdominal Ganglion
 
 125.1
Adult Crop
 
 2.7
Adult Midgut
 
 1.8
Adult Hindgut
 
 6.1
Adult Malpighian Tubules
 
 1088.9
Adult Fat Body
 
 8.6
Adult Salivary Gland no informative data
Adult Heart
 
 7.625
Adult VirginFemale Spermatheca
 
 5.1
Adult InseminatedFemale Spermatheca
 
 5.6
Adult Ovary
 
 1.5
Adult Testis
 
 36.7
Adult Male Accessory Gland
 
 9.6
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 32.625
Larval Midgut
 
 2.6
Larval Hindgut no informative data
Larval Malpighian Tubules
 
 214.9
Larval Fat Body
 
 7.2
Larval Salivary Gland
 
 1.9
Larval Trachea
 
 2.65
Larval Carcass
 
 5.5
Adult Head
 
 53.7
Adult Eye
 
 41.775
Adult Brain
 
 104.8
Adult Thoracic-Abdominal Ganglion
 
 125.1
Adult Crop
 
 2.7
Adult Midgut
 
 1.8
Adult Hindgut
 
 6.1
Adult Malpighian Tubules
 (1088.9)
Adult Fat Body
 
 8.6
Adult Salivary Gland no informative data
Adult Heart
 
 7.625
Adult VirginFemale Spermatheca
 
 5.1
Adult InseminatedFemale Spermatheca
 
 5.6
Adult Ovary
 
 1.5
Adult Testis
 
 36.7
Adult Male Accessory Gland
 
 9.6
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 32.625
Larval Midgut
 
 2.6
Larval Hindgut no informative data
Larval Malpighian Tubules
 
 214.9
Larval Fat Body
 
 7.2
Larval Salivary Gland
 
 1.9
Larval Trachea
 
 2.65
Larval Carcass
 
 5.5
Adult Head
 
 53.7
Adult Eye
 
 41.775
Adult Brain
 
 104.8
Adult Thoracic-Abdominal Ganglion
 
 125.1
Adult Crop
 
 2.7
Adult Midgut
 
 1.8
Adult Hindgut
 
 6.1
Adult Malpighian Tubules
 1088.9
Adult Fat Body
 
 8.6
Adult Salivary Gland no informative data
Adult Heart
 
 7.625
Adult VirginFemale Spermatheca
 
 5.1
Adult InseminatedFemale Spermatheca
 
 5.6
Adult Ovary
 
 1.5
Adult Testis
 
 36.7
Adult Male Accessory Gland
 
 9.6
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 32.625
Larval Midgut
 
 2.6
Larval Hindgut no informative data
Larval Malpighian Tubules
 
 214.9
Larval Fat Body
 
 7.2
Larval Salivary Gland
 
 1.9
Larval Trachea
 
 2.65
Larval Carcass
 
 5.5
Adult Head
 
 53.7
Adult Eye
 
 41.775
Adult Brain
 
 104.8
Adult Thoracic-Abdominal Ganglion
 
 125.1
Adult Crop
 
 2.7
Adult Midgut
 
 1.8
Adult Hindgut
 
 6.1
Adult Malpighian Tubules
 
 1088.9
Adult Fat Body
 
 8.6
Adult Salivary Gland no informative data
Adult Heart
 
 7.625
Adult VirginFemale Spermatheca
 
 5.1
Adult InseminatedFemale Spermatheca
 
 5.6
Adult Ovary
 
 1.5
Adult Testis
 
 36.7
Adult Male Accessory Gland
 
 9.6
Adult Carcass no informative data
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut no informative data
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland no informative data
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass no informative data

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 53.7
 
NA 
Eye
 
 41.775
 
NA 
Brain
 
 104.8
 
32.625 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 125.1
 
NA 
Crop
 
 2.7
 
2.6 
Midgut
 
 1.8
 
no informative data 
Hindgut
 
 6.1
 
214.9 
Malpighian Tubules
 
 1088.9
 
7.2 
Fat Body
 
 8.6
 
1.9 
Salivary Gland
 
 no informative data
 
NA 
Heart
 
 7.625
 
2.65 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 5.1
 
NA 
InseminatedFemale Spermatheca
 
 5.6
 
NA 
Ovary
 
 1.5
 
NA 
Testis
 
 36.7
 
NA 
Male Accessory Gland
 
 9.6
 
5.5 
Carcass
 
 no informative data

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 1 )
For All Classical Alleles Show

Allele of CG8837ClassMutagenStocksKnown lesion
CG8837EY025921 --
hide Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show

Allele of CG8837ClassMutagenStocksKnown lesion
CG8837GD8622 Yes
CG8837KK1066611 Yes
hide Aneuploid Aberrations
Disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
hide Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
hide Terms Based on Experimental Evidence ( 0 terms )
hide Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term
References
Biological Process
CV term
References
Cellular Component
CV term
References
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Protein-protein
Interacting group
Assay
References
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Interacts with
Please look at the allele data for full details of the genetic interactions
CG8837 allele
Gene
References
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Linkouts
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
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Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
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hide Stocks Listed in FlyBase ( 4 )
Bloomington
VDRC
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Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
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Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
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Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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Source for database identity of
Source for database merge of
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Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym
Name Synonym
Secondary FlyBase IDs
hide References ( 12 )
Research paper
Wang et al., 2004, GenomeBiol. 5(9): R69
Function-informed transcriptome analysis of Drosophila renal tubule. [FBrf0180324]
Supplementary material
The modENCODE Consortium, 2010, Science 330(6012):
DataS14: Gene co-expression clusters. [FBrf0213979]
Mummery-Widmer et al., 2009, Nature 458(7241):
Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase
Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center
RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510]
Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center
RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms.
Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
Ryder, 2004.4.26, Exelixis CG deletion data.
Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis
FlyBase, 1992-, FlyBase curation
FlyBase curation. [FBrf0105495]
Computer file
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
Automatic genome annotation
FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.]
[Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation
Ketchum, 1999.11, [Annotations performed at the Celera Jamboreee.]
[Annotations performed at the Celera Jamboreee.] [FBrf0126677]