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Gene Dmel\CG3702

General Information
Symbol	Dmel\CG3702	Species	D. melanogaster
Name		Annotation symbol	CG3702
Feature type	protein_coding_gene	FlyBase ID	FBgn0031590
Gene Model Status	Current	Stock availability	2 publicly available
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	24D8-24E1	Sequence location	2L:4,224,650..4,227,097 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG3702 (FBgn0031590). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Cleft lip and palate transmembrane 1. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages, during early larval stages, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, larval hindgut, larval/adult Malpighian tubules, larval salivary gland, adult ovary, adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult hindgut, adult heart, larval/adult fat body, adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1623434_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG3702. Gene sequence location is 2L:4224650..4227097.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 24D8-24E1   Limits computationally determined from genome sequence between P{lacW}edk01102 and P{PZ}tutl01085
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG3702 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.47 Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG3702-RA FBtr0077477  NM_134975   2369   641 CG3702-RB FBtr0334790  NM_001273088   2252   641
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG3702-PA   FBpp0077166   73.6   641   7.14     NP_608819   AAF51035 CG3702-PB   FBpp0306838   73.6   641   7.14     NP_001260017   AGB92553
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Cleft lip and palate transmembrane 1 (IPR008429)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA538571   AA735750   AE014134 AAF51035   AE014134 AGB92553   AI109730   AI259097   AI259513   AI260858   AI260995   AI293319   AI293382   AI293533   AI297350   AI532951   AI533122   AI533198   AI534233   AI944963   AW944036   AY052040 AAK93464   BE975524   BE975525   BE977931   BF485736   BF485760   BF487795   BF487935   BF490873   BF490908   BF491546   BF491601   BF491886   BF491932   BF492086   BF492300   BF492916   BF492917   BF496223   BF496399   BF496865   BF497182   BF497307   BF498483   BF498827   BF499717   BF500138   BF500695   BF502138   BF502605   BF502862   BF502958   BF503989   BF504785   BF504846   BF506729   BG632527   BG633840   BG634374   BG634796   BG635202   BG635681   BI167876   BI168938   BI171823   BI227744   BI228724   BI232221   BI233067   BI237071   BI241723   BI241855   BI241934   BI242398   BI352027   BI354804   BI365315   BI366262   BI368469   BI368477   BI370338   BI371690   BI565106   BI566868   BI574273   BI574317   BI574327   BI574782   BI575141   BI575414   BI578726   BI580716   BI583409   BI583414   BI584853   BI585207   BI587177   BI588337   BI588401   BI606086   BI617874   BI619807   BI621966   BI624619   BI625061   BI629030   BI633412   BI637581   CA806811   CK657783   CK659931   CO179573   CO191643   CO302116   CO310947   CO315360   CO320370   CO328262   CO344449   EC064735   EC207402   EC218379   EC223223   EC226711   EC246937   EC250540   EC256616   EL876389   EV585366   GH750298   GH752213   GH752673   GH752680   GH752822   GH753877   GH755473   GH755703   GH756959   GH757531   GH758506   GH759127   GH759891   GH761403   GH770614   GH771480   GH771768   GH772324   GH776017   GH776669   GH776978   GH778161   GH780514   GH783384   GH783924   GH784693   GH784889   GH785441   GH785589   GH786584   GH787293   GH788510   GH789371   GH790091   GH792563   GH795840   GH799190   GH800234   GH802885   GH805025   GH805364   GH805378   GH805622   GH806575   GH807597   GH807747   GH808569   GH809861   GH811152   GH811320   GH813331   GH816548   GH816661   GH817509   GH817673   GH818247   GH819626   GH820352   GH821451   GH824055   GH831145   GH832482   GH832783   GH833384   GH833663   GH833881   GH835511   GH837441   GH838368   GH838423   GH838516   GH839240   GH839414   GH840538   GH842335   GH842758   GH845350   GH846663   GH848911   GH851083   GH851139   GH851252   GH852179   GH852433   GH852676   GH852677   GH852700   GH853061   GH853148   GH855755   GH857390   GH857435   GH857546   GH859525   GH859760   GH860250   GH860651   GH860839   GH861112   GH862250   GH862543   GH862660   GH863471   GH863903   GH864069   GH864846   GH866948   GH869856   GH869965   GH870772   GH873119   GH873362   GH873427   GH877485   GH877488   GH879152   GH879493   GH879672   GH881151   GH882257   GH882576   GH885059   GH885723   GH885730   GH887641   GH891011   GH891665   GH891983   GH893482   GH896479   GH898266   GH899271   GH899864   GH900184   GH900716   GH902211   GH903838   GH903922   GH904562   GH904820   GH906617   GH910489   GH911900   GH912131   GH912824   GH913541   GH914041   GH917276   GH921806   GH924268   GH925609   GH925619   GH926305   GH927772   GH927837   GH927884   GH928354   GH929327   GH930605   GH930971   GH933289   GH933783   GH934028
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VQX6
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 7 -- 8   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 9 -- 10   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 11 -- 12   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 13 -- 16   organism | ubiquitous   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, larval hindgut, larval/adult Malpighian tubules, larval salivary gland, adult ovary, adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, adult hindgut, adult heart, larval/adult fat body, adult salivary gland, larval trachea, adult spermathecae, adult male accessory gland, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    361.6 Larval Midgut    624.7 Larval Hindgut    545.1 Larval Malpighian Tubules    1240.8 Larval Fat Body    467.2 Larval Salivary Gland    709.6 Larval Trachea    322.125 Larval Carcass    397.975 Adult Head    304.1 Adult Eye    277.95 Adult Brain    383.3 Adult Thoracic-Abdominal Ganglion    398.8 Adult Crop    311.2 Adult Midgut    703.2 Adult Hindgut    430.7 Adult Malpighian Tubules    1149.5 Adult Fat Body    398.9 Adult Salivary Gland    385.7 Adult Heart    359.475 Adult VirginFemale Spermatheca    266.5 Adult InseminatedFemale Spermatheca    255.1 Adult Ovary    521.8 Adult Testis    900.8 Adult Male Accessory Gland    395 Adult Carcass    356.8 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    361.6 Larval Midgut  (624.7) Larval Hindgut  (545.1) Larval Malpighian Tubules  (1240.8) Larval Fat Body    467.2 Larval Salivary Gland  (709.6) Larval Trachea    322.125 Larval Carcass    397.975 Adult Head    304.1 Adult Eye    277.95 Adult Brain    383.3 Adult Thoracic-Abdominal Ganglion    398.8 Adult Crop    311.2 Adult Midgut  (703.2) Adult Hindgut    430.7 Adult Malpighian Tubules  (1149.5) Adult Fat Body    398.9 Adult Salivary Gland    385.7 Adult Heart    359.475 Adult VirginFemale Spermatheca    266.5 Adult InseminatedFemale Spermatheca    255.1 Adult Ovary  521.8 Adult Testis  (900.8) Adult Male Accessory Gland    395 Adult Carcass    356.8 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    361.6 Larval Midgut    624.7 Larval Hindgut    545.1 Larval Malpighian Tubules  (1240.8) Larval Fat Body    467.2 Larval Salivary Gland    709.6 Larval Trachea    322.125 Larval Carcass    397.975 Adult Head    304.1 Adult Eye    277.95 Adult Brain    383.3 Adult Thoracic-Abdominal Ganglion    398.8 Adult Crop    311.2 Adult Midgut    703.2 Adult Hindgut    430.7 Adult Malpighian Tubules  (1149.5) Adult Fat Body    398.9 Adult Salivary Gland    385.7 Adult Heart    359.475 Adult VirginFemale Spermatheca    266.5 Adult InseminatedFemale Spermatheca    255.1 Adult Ovary    521.8 Adult Testis    900.8 Adult Male Accessory Gland    395 Adult Carcass    356.8 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    361.6 Larval Midgut    624.7 Larval Hindgut    545.1 Larval Malpighian Tubules    1240.8 Larval Fat Body    467.2 Larval Salivary Gland    709.6 Larval Trachea    322.125 Larval Carcass    397.975 Adult Head    304.1 Adult Eye    277.95 Adult Brain    383.3 Adult Thoracic-Abdominal Ganglion    398.8 Adult Crop    311.2 Adult Midgut    703.2 Adult Hindgut    430.7 Adult Malpighian Tubules    1149.5 Adult Fat Body    398.9 Adult Salivary Gland    385.7 Adult Heart    359.475 Adult VirginFemale Spermatheca    266.5 Adult InseminatedFemale Spermatheca    255.1 Adult Ovary    521.8 Adult Testis    900.8 Adult Male Accessory Gland    395 Adult Carcass    356.8 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    361.6 Larval Midgut    624.7 Larval Hindgut    545.1 Larval Malpighian Tubules    1240.8 Larval Fat Body    467.2 Larval Salivary Gland    709.6 Larval Trachea    322.125 Larval Carcass    397.975 Adult Head    304.1 Adult Eye    277.95 Adult Brain    383.3 Adult Thoracic-Abdominal Ganglion    398.8 Adult Crop    311.2 Adult Midgut    703.2 Adult Hindgut    430.7 Adult Malpighian Tubules    1149.5 Adult Fat Body    398.9 Adult Salivary Gland    385.7 Adult Heart    359.475 Adult VirginFemale Spermatheca    266.5 Adult InseminatedFemale Spermatheca    255.1 Adult Ovary    521.8 Adult Testis    900.8 Adult Male Accessory Gland    395 Adult Carcass    356.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    361.6 Larval Midgut  624.7 Larval Hindgut  545.1 Larval Malpighian Tubules  (1240.8) Larval Fat Body    467.2 Larval Salivary Gland  709.6 Larval Trachea    322.125 Larval Carcass    397.975 Adult Head    304.1 Adult Eye    277.95 Adult Brain    383.3 Adult Thoracic-Abdominal Ganglion    398.8 Adult Crop    311.2 Adult Midgut  703.2 Adult Hindgut    430.7 Adult Malpighian Tubules  (1149.5) Adult Fat Body    398.9 Adult Salivary Gland    385.7 Adult Heart    359.475 Adult VirginFemale Spermatheca    266.5 Adult InseminatedFemale Spermatheca    255.1 Adult Ovary  521.8 Adult Testis  (900.8) Adult Male Accessory Gland    395 Adult Carcass    356.8 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    361.6 Larval Midgut    624.7 Larval Hindgut    545.1 Larval Malpighian Tubules  1240.8 Larval Fat Body    467.2 Larval Salivary Gland    709.6 Larval Trachea    322.125 Larval Carcass    397.975 Adult Head    304.1 Adult Eye    277.95 Adult Brain    383.3 Adult Thoracic-Abdominal Ganglion    398.8 Adult Crop    311.2 Adult Midgut    703.2 Adult Hindgut    430.7 Adult Malpighian Tubules  1149.5 Adult Fat Body    398.9 Adult Salivary Gland    385.7 Adult Heart    359.475 Adult VirginFemale Spermatheca    266.5 Adult InseminatedFemale Spermatheca    255.1 Adult Ovary    521.8 Adult Testis    900.8 Adult Male Accessory Gland    395 Adult Carcass    356.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    361.6 Larval Midgut    624.7 Larval Hindgut    545.1 Larval Malpighian Tubules    1240.8 Larval Fat Body    467.2 Larval Salivary Gland    709.6 Larval Trachea    322.125 Larval Carcass    397.975 Adult Head    304.1 Adult Eye    277.95 Adult Brain    383.3 Adult Thoracic-Abdominal Ganglion    398.8 Adult Crop    311.2 Adult Midgut    703.2 Adult Hindgut    430.7 Adult Malpighian Tubules    1149.5 Adult Fat Body    398.9 Adult Salivary Gland    385.7 Adult Heart    359.475 Adult VirginFemale Spermatheca    266.5 Adult InseminatedFemale Spermatheca    255.1 Adult Ovary    521.8 Adult Testis    900.8 Adult Male Accessory Gland    395 Adult Carcass    356.8 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    304.1   NA  Eye    277.95   NA  Brain    383.3   361.6  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    398.8   NA  Crop    311.2   624.7  Midgut    703.2   545.1  Hindgut    430.7   1240.8  Malpighian Tubules    1149.5   467.2  Fat Body    398.9   709.6  Salivary Gland    385.7   NA  Heart    359.475   322.125  Trachea    NA   NA  VirginFemale Spermatheca    266.5   NA  InseminatedFemale Spermatheca    255.1   NA  Ovary    521.8   NA  Testis    900.8   NA  Male Accessory Gland    395   397.975  Carcass    356.8 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    23 central nervous system, pupae P8    20 head, virgin 1-day female    18 head, virgin 4-day female    13 head, virgin 20-day female    17 head, mated 1-day female    13 head, mated 4-day female    15 head, mated 20-day female    16 head, mated 1-day male    23 head, mated 4-day male    20 head, mated 20-day male    27 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    34 digestive system, 1-day adult    45 digestive system, 4-day adult    47 digestive system, 20-day adult    46 fat body, larvae L3 wandering    7 fat body, white prepupae    23 fat body, pupae P8    21 carcass, larvae L3 wandering    27 carcass, 1-day adult    12 carcass, 4-day adult    18 carcass, 20-day adult    17 ovary, virgin 4-day female    60 ovary, mated 4-day female    58 testis, mated 4-day male    147 accessory gland, mated 4-day male    27 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (49) central nervous system, larvae L3    23 central nervous system, pupae P8    20 head, virgin 1-day female    18 head, virgin 4-day female    13 head, virgin 20-day female    17 head, mated 1-day female    13 head, mated 4-day female    15 head, mated 20-day female    16 head, mated 1-day male    23 head, mated 4-day male    20 head, mated 20-day male  (27) salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    15 digestive system, larvae L3 wandering  (34) digestive system, 1-day adult  (45) digestive system, 4-day adult  (47) digestive system, 20-day adult  (46) fat body, larvae L3 wandering    7 fat body, white prepupae    23 fat body, pupae P8    21 carcass, larvae L3 wandering  (27) carcass, 1-day adult    12 carcass, 4-day adult    18 carcass, 20-day adult    17 ovary, virgin 4-day female  (60) ovary, mated 4-day female  (58) testis, mated 4-day male  (147) accessory gland, mated 4-day male  (27) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    23 central nervous system, pupae P8    20 head, virgin 1-day female    18 head, virgin 4-day female    13 head, virgin 20-day female    17 head, mated 1-day female    13 head, mated 4-day female    15 head, mated 20-day female    16 head, mated 1-day male    23 head, mated 4-day male    20 head, mated 20-day male    27 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    34 digestive system, 1-day adult    45 digestive system, 4-day adult    47 digestive system, 20-day adult    46 fat body, larvae L3 wandering    7 fat body, white prepupae    23 fat body, pupae P8    21 carcass, larvae L3 wandering    27 carcass, 1-day adult    12 carcass, 4-day adult    18 carcass, 20-day adult    17 ovary, virgin 4-day female    60 ovary, mated 4-day female    58 testis, mated 4-day male  (147) accessory gland, mated 4-day male    27 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    23 central nervous system, pupae P8    20 head, virgin 1-day female    18 head, virgin 4-day female    13 head, virgin 20-day female    17 head, mated 1-day female    13 head, mated 4-day female    15 head, mated 20-day female    16 head, mated 1-day male    23 head, mated 4-day male    20 head, mated 20-day male    27 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    34 digestive system, 1-day adult    45 digestive system, 4-day adult    47 digestive system, 20-day adult    46 fat body, larvae L3 wandering    7 fat body, white prepupae    23 fat body, pupae P8    21 carcass, larvae L3 wandering    27 carcass, 1-day adult    12 carcass, 4-day adult    18 carcass, 20-day adult    17 ovary, virgin 4-day female    60 ovary, mated 4-day female    58 testis, mated 4-day male    147 accessory gland, mated 4-day male    27 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    23 central nervous system, pupae P8    20 head, virgin 1-day female    18 head, virgin 4-day female    13 head, virgin 20-day female    17 head, mated 1-day female    13 head, mated 4-day female    15 head, mated 20-day female    16 head, mated 1-day male    23 head, mated 4-day male    20 head, mated 20-day male    27 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    34 digestive system, 1-day adult    45 digestive system, 4-day adult    47 digestive system, 20-day adult    46 fat body, larvae L3 wandering    7 fat body, white prepupae    23 fat body, pupae P8    21 carcass, larvae L3 wandering    27 carcass, 1-day adult    12 carcass, 4-day adult    18 carcass, 20-day adult    17 ovary, virgin 4-day female    60 ovary, mated 4-day female    58 testis, mated 4-day male    147 accessory gland, mated 4-day male    27 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (49) central nervous system, larvae L3    23 central nervous system, pupae P8    20 head, virgin 1-day female    18 head, virgin 4-day female    13 head, virgin 20-day female    17 head, mated 1-day female    13 head, mated 4-day female    15 head, mated 20-day female    16 head, mated 1-day male    23 head, mated 4-day male    20 head, mated 20-day male  27 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    15 digestive system, larvae L3 wandering  (34) digestive system, 1-day adult  (45) digestive system, 4-day adult  (47) digestive system, 20-day adult  (46) fat body, larvae L3 wandering    7 fat body, white prepupae    23 fat body, pupae P8    21 carcass, larvae L3 wandering  27 carcass, 1-day adult    12 carcass, 4-day adult    18 carcass, 20-day adult    17 ovary, virgin 4-day female  (60) ovary, mated 4-day female  (58) testis, mated 4-day male  (147) accessory gland, mated 4-day male  27 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    23 central nervous system, pupae P8    20 head, virgin 1-day female    18 head, virgin 4-day female    13 head, virgin 20-day female    17 head, mated 1-day female    13 head, mated 4-day female    15 head, mated 20-day female    16 head, mated 1-day male    23 head, mated 4-day male    20 head, mated 20-day male    27 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    34 digestive system, 1-day adult    45 digestive system, 4-day adult    47 digestive system, 20-day adult    46 fat body, larvae L3 wandering    7 fat body, white prepupae    23 fat body, pupae P8    21 carcass, larvae L3 wandering    27 carcass, 1-day adult    12 carcass, 4-day adult    18 carcass, 20-day adult    17 ovary, virgin 4-day female    60 ovary, mated 4-day female    58 testis, mated 4-day male  (147) accessory gland, mated 4-day male    27 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    49 central nervous system, larvae L3    23 central nervous system, pupae P8    20 head, virgin 1-day female    18 head, virgin 4-day female    13 head, virgin 20-day female    17 head, mated 1-day female    13 head, mated 4-day female    15 head, mated 20-day female    16 head, mated 1-day male    23 head, mated 4-day male    20 head, mated 20-day male    27 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    15 digestive system, larvae L3 wandering    34 digestive system, 1-day adult    45 digestive system, 4-day adult    47 digestive system, 20-day adult    46 fat body, larvae L3 wandering    7 fat body, white prepupae    23 fat body, pupae P8    21 carcass, larvae L3 wandering    27 carcass, 1-day adult    12 carcass, 4-day adult    18 carcass, 20-day adult    17 ovary, virgin 4-day female    60 ovary, mated 4-day female    58 testis, mated 4-day male    147 accessory gland, mated 4-day male    27 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages, during early larval stages, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    96 embryo 02-04hr    41 embryo 04-06hr    100 embryo 06-08hr    108 embryo 08-10hr    91 embryo 10-12hr    89 embryo 12-14hr    76 embryo 14-16hr    70 embryo 16-18hr    57 embryo 18-20hr    43 embryo 20-22hr    32 embryo 22-24hr    34 larva L1    70 larva L2    73 larva L3 12hr old    45 larva L3 puffstage 1-2    34 larva L3 puffstage 3-6    41 larva L3 puffstage 7-9    47 white prepupae new    48 white prepupae 12hr    44 white prepupae 24hr    55 pupae 2d postWPP    55 pupae 3d postWPP    55 pupae 4d postWPP    55 adult male 01day    76 adult male 05day    87 adult male 30day    88 adult female 01day    58 adult female 05day    76 adult female 30day    79 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (96) embryo 02-04hr  (41) embryo 04-06hr  (100) embryo 06-08hr  (108) embryo 08-10hr  (91) embryo 10-12hr  (89) embryo 12-14hr  (76) embryo 14-16hr  (70) embryo 16-18hr  (57) embryo 18-20hr  (43) embryo 20-22hr  (32) embryo 22-24hr  (34) larva L1  (70) larva L2  (73) larva L3 12hr old  (45) larva L3 puffstage 1-2  (34) larva L3 puffstage 3-6  (41) larva L3 puffstage 7-9  (47) white prepupae new  (48) white prepupae 12hr  (44) white prepupae 24hr  (55) pupae 2d postWPP  (55) pupae 3d postWPP  (55) pupae 4d postWPP  (55) adult male 01day  (76) adult male 05day  (87) adult male 30day  (88) adult female 01day  (58) adult female 05day  (76) adult female 30day  (79) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    96 embryo 02-04hr    41 embryo 04-06hr    100 embryo 06-08hr  (108) embryo 08-10hr    91 embryo 10-12hr    89 embryo 12-14hr    76 embryo 14-16hr    70 embryo 16-18hr    57 embryo 18-20hr    43 embryo 20-22hr    32 embryo 22-24hr    34 larva L1    70 larva L2    73 larva L3 12hr old    45 larva L3 puffstage 1-2    34 larva L3 puffstage 3-6    41 larva L3 puffstage 7-9    47 white prepupae new    48 white prepupae 12hr    44 white prepupae 24hr    55 pupae 2d postWPP    55 pupae 3d postWPP    55 pupae 4d postWPP    55 adult male 01day    76 adult male 05day    87 adult male 30day    88 adult female 01day    58 adult female 05day    76 adult female 30day    79 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    96 embryo 02-04hr    41 embryo 04-06hr    100 embryo 06-08hr    108 embryo 08-10hr    91 embryo 10-12hr    89 embryo 12-14hr    76 embryo 14-16hr    70 embryo 16-18hr    57 embryo 18-20hr    43 embryo 20-22hr    32 embryo 22-24hr    34 larva L1    70 larva L2    73 larva L3 12hr old    45 larva L3 puffstage 1-2    34 larva L3 puffstage 3-6    41 larva L3 puffstage 7-9    47 white prepupae new    48 white prepupae 12hr    44 white prepupae 24hr    55 pupae 2d postWPP    55 pupae 3d postWPP    55 pupae 4d postWPP    55 adult male 01day    76 adult male 05day    87 adult male 30day    88 adult female 01day    58 adult female 05day    76 adult female 30day    79 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    96 embryo 02-04hr    41 embryo 04-06hr    100 embryo 06-08hr    108 embryo 08-10hr    91 embryo 10-12hr    89 embryo 12-14hr    76 embryo 14-16hr    70 embryo 16-18hr    57 embryo 18-20hr    43 embryo 20-22hr    32 embryo 22-24hr    34 larva L1    70 larva L2    73 larva L3 12hr old    45 larva L3 puffstage 1-2    34 larva L3 puffstage 3-6    41 larva L3 puffstage 7-9    47 white prepupae new    48 white prepupae 12hr    44 white prepupae 24hr    55 pupae 2d postWPP    55 pupae 3d postWPP    55 pupae 4d postWPP    55 adult male 01day    76 adult male 05day    87 adult male 30day    88 adult female 01day    58 adult female 05day    76 adult female 30day    79 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (96) embryo 02-04hr  (41) embryo 04-06hr  (100) embryo 06-08hr  (108) embryo 08-10hr  (91) embryo 10-12hr  (89) embryo 12-14hr  (76) embryo 14-16hr  (70) embryo 16-18hr  (57) embryo 18-20hr  (43) embryo 20-22hr  32 embryo 22-24hr  (34) larva L1  (70) larva L2  (73) larva L3 12hr old  (45) larva L3 puffstage 1-2  (34) larva L3 puffstage 3-6  (41) larva L3 puffstage 7-9  (47) white prepupae new  (48) white prepupae 12hr  (44) white prepupae 24hr  (55) pupae 2d postWPP  (55) pupae 3d postWPP  (55) pupae 4d postWPP  (55) adult male 01day  (76) adult male 05day  (87) adult male 30day  (88) adult female 01day  (58) adult female 05day  (76) adult female 30day  (79) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    96 embryo 02-04hr    41 embryo 04-06hr    100 embryo 06-08hr  108 embryo 08-10hr    91 embryo 10-12hr    89 embryo 12-14hr    76 embryo 14-16hr    70 embryo 16-18hr    57 embryo 18-20hr    43 embryo 20-22hr    32 embryo 22-24hr    34 larva L1    70 larva L2    73 larva L3 12hr old    45 larva L3 puffstage 1-2    34 larva L3 puffstage 3-6    41 larva L3 puffstage 7-9    47 white prepupae new    48 white prepupae 12hr    44 white prepupae 24hr    55 pupae 2d postWPP    55 pupae 3d postWPP    55 pupae 4d postWPP    55 adult male 01day    76 adult male 05day    87 adult male 30day    88 adult female 01day    58 adult female 05day    76 adult female 30day    79 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    96 embryo 02-04hr    41 embryo 04-06hr    100 embryo 06-08hr    108 embryo 08-10hr    91 embryo 10-12hr    89 embryo 12-14hr    76 embryo 14-16hr    70 embryo 16-18hr    57 embryo 18-20hr    43 embryo 20-22hr    32 embryo 22-24hr    34 larva L1    70 larva L2    73 larva L3 12hr old    45 larva L3 puffstage 1-2    34 larva L3 puffstage 3-6    41 larva L3 puffstage 7-9    47 white prepupae new    48 white prepupae 12hr    44 white prepupae 24hr    55 pupae 2d postWPP    55 pupae 3d postWPP    55 pupae 4d postWPP    55 adult male 01day    76 adult male 05day    87 adult male 30day    88 adult female 01day    58 adult female 05day    76 adult female 30day    79 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    85 Schneider line 2 Sg4    85 embryonic 1182-4H    55 embryonic GM2    43 embryonic Kc167    43 embryonic S1    70 embryonic S3    99 leg disc CME L1    79 wing disc CME-W2    80 wing disc ML-DmD8    41 wing disc ML-DmD9    76 wing disc ML-DmD16-c3    89 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    64 eye-antennal disc ML-DmD11    80 antennal disc ML-DmD20-c5    67 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    70 CNS ML-DmBG2-c2    70 tumorous blood cells mbn2    69 ovary fGS/OSS    48 ovary OSC    34 ovary OSS    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (85) Schneider line 2 Sg4  (85) embryonic 1182-4H  (55) embryonic GM2  (43) embryonic Kc167  (43) embryonic S1  (70) embryonic S3  (99) leg disc CME L1  (79) wing disc CME-W2  (80) wing disc ML-DmD8  (41) wing disc ML-DmD9  (76) wing disc ML-DmD16-c3  (89) wing disc ML-DmD21  (39) wing disc ML-DmD32  (53) haltere disc ML-DmD17-c3  (64) eye-antennal disc ML-DmD11  (80) antennal disc ML-DmD20-c5  (67) mixed discs ML-DmD4-c1  (69) CNS ML-DmBG1-c1  (70) CNS ML-DmBG2-c2  (70) tumorous blood cells mbn2  (69) ovary fGS/OSS  (48) ovary OSC  (34) ovary OSS    22 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    85 Schneider line 2 Sg4    85 embryonic 1182-4H    55 embryonic GM2    43 embryonic Kc167    43 embryonic S1    70 embryonic S3    99 leg disc CME L1    79 wing disc CME-W2    80 wing disc ML-DmD8    41 wing disc ML-DmD9    76 wing disc ML-DmD16-c3    89 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    64 eye-antennal disc ML-DmD11    80 antennal disc ML-DmD20-c5    67 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    70 CNS ML-DmBG2-c2    70 tumorous blood cells mbn2    69 ovary fGS/OSS    48 ovary OSC    34 ovary OSS    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    85 Schneider line 2 Sg4    85 embryonic 1182-4H    55 embryonic GM2    43 embryonic Kc167    43 embryonic S1    70 embryonic S3    99 leg disc CME L1    79 wing disc CME-W2    80 wing disc ML-DmD8    41 wing disc ML-DmD9    76 wing disc ML-DmD16-c3    89 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    64 eye-antennal disc ML-DmD11    80 antennal disc ML-DmD20-c5    67 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    70 CNS ML-DmBG2-c2    70 tumorous blood cells mbn2    69 ovary fGS/OSS    48 ovary OSC    34 ovary OSS    22 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    85 Schneider line 2 Sg4    85 embryonic 1182-4H    55 embryonic GM2    43 embryonic Kc167    43 embryonic S1    70 embryonic S3    99 leg disc CME L1    79 wing disc CME-W2    80 wing disc ML-DmD8    41 wing disc ML-DmD9    76 wing disc ML-DmD16-c3    89 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    64 eye-antennal disc ML-DmD11    80 antennal disc ML-DmD20-c5    67 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    70 CNS ML-DmBG2-c2    70 tumorous blood cells mbn2    69 ovary fGS/OSS    48 ovary OSC    34 ovary OSS    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (85) Schneider line 2 Sg4  (85) embryonic 1182-4H  (55) embryonic GM2  (43) embryonic Kc167  (43) embryonic S1  (70) embryonic S3  (99) leg disc CME L1  (79) wing disc CME-W2  (80) wing disc ML-DmD8  (41) wing disc ML-DmD9  (76) wing disc ML-DmD16-c3  (89) wing disc ML-DmD21  (39) wing disc ML-DmD32  (53) haltere disc ML-DmD17-c3  (64) eye-antennal disc ML-DmD11  (80) antennal disc ML-DmD20-c5  (67) mixed discs ML-DmD4-c1  (69) CNS ML-DmBG1-c1  (70) CNS ML-DmBG2-c2  (70) tumorous blood cells mbn2  (69) ovary fGS/OSS  (48) ovary OSC  (34) ovary OSS    22 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    85 Schneider line 2 Sg4    85 embryonic 1182-4H    55 embryonic GM2    43 embryonic Kc167    43 embryonic S1    70 embryonic S3    99 leg disc CME L1    79 wing disc CME-W2    80 wing disc ML-DmD8    41 wing disc ML-DmD9    76 wing disc ML-DmD16-c3    89 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    64 eye-antennal disc ML-DmD11    80 antennal disc ML-DmD20-c5    67 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    70 CNS ML-DmBG2-c2    70 tumorous blood cells mbn2    69 ovary fGS/OSS    48 ovary OSC    34 ovary OSS    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    85 Schneider line 2 Sg4    85 embryonic 1182-4H    55 embryonic GM2    43 embryonic Kc167    43 embryonic S1    70 embryonic S3    99 leg disc CME L1    79 wing disc CME-W2    80 wing disc ML-DmD8    41 wing disc ML-DmD9    76 wing disc ML-DmD16-c3    89 wing disc ML-DmD21    39 wing disc ML-DmD32    53 haltere disc ML-DmD17-c3    64 eye-antennal disc ML-DmD11    80 antennal disc ML-DmD20-c5    67 mixed discs ML-DmD4-c1    69 CNS ML-DmBG1-c1    70 CNS ML-DmBG2-c2    70 tumorous blood cells mbn2    69 ovary fGS/OSS    48 ovary OSC    34 ovary OSS    22 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    21 cold shock, 4-day adult    17 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    36 Cadmium 50 mM 12 hrs, larvae L3    31 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    50 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    69 Ethanol 5% 3 hrs, larvae L3    30 Ethanol 10% 3 hrs, larvae L3    33 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    41 Caffeine 25 mg/ml 48 hrs, 4-day adult    20 Paraquat 5 mM 48 hrs, 4-day adult    55 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    36 Rotenone 8 μg 12 hrs, larvae L3    31 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    21 cold shock, 4-day adult    17 heat shock, 4-day adult  (44) Cadmium 50 mM 6 hrs, larvae L3  (36) Cadmium 50 mM 12 hrs, larvae L3  (31) Cadmium 50 mM 48 hrs, 4-day adult  (40) Cadmium 100 mM 48 hrs, 4-day adult  (50) Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult  (29) Ethanol 2.5% 3 hrs, larvae L3  (69) Ethanol 5% 3 hrs, larvae L3  (30) Ethanol 10% 3 hrs, larvae L3  (33) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (27) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (41) Caffeine 25 mg/ml 48 hrs, 4-day adult    20 Paraquat 5 mM 48 hrs, 4-day adult  (55) Paraquat 10 mM 48 hrs, 4-day adult  (66) Rotenone 2 μg 12 hrs, larvae L3  (36) Rotenone 8 μg 12 hrs, larvae L3  (31) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    21 cold shock, 4-day adult    17 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    36 Cadmium 50 mM 12 hrs, larvae L3    31 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    50 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    69 Ethanol 5% 3 hrs, larvae L3    30 Ethanol 10% 3 hrs, larvae L3    33 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    41 Caffeine 25 mg/ml 48 hrs, 4-day adult    20 Paraquat 5 mM 48 hrs, 4-day adult    55 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    36 Rotenone 8 μg 12 hrs, larvae L3    31 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    21 cold shock, 4-day adult    17 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    36 Cadmium 50 mM 12 hrs, larvae L3    31 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    50 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    69 Ethanol 5% 3 hrs, larvae L3    30 Ethanol 10% 3 hrs, larvae L3    33 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    41 Caffeine 25 mg/ml 48 hrs, 4-day adult    20 Paraquat 5 mM 48 hrs, 4-day adult    55 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    36 Rotenone 8 μg 12 hrs, larvae L3    31 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    21 cold shock, 4-day adult    17 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    36 Cadmium 50 mM 12 hrs, larvae L3    31 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    50 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    69 Ethanol 5% 3 hrs, larvae L3    30 Ethanol 10% 3 hrs, larvae L3    33 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    41 Caffeine 25 mg/ml 48 hrs, 4-day adult    20 Paraquat 5 mM 48 hrs, 4-day adult    55 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    36 Rotenone 8 μg 12 hrs, larvae L3    31 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    21 cold shock, 4-day adult    17 heat shock, 4-day adult  (44) Cadmium 50 mM 6 hrs, larvae L3  (36) Cadmium 50 mM 12 hrs, larvae L3  31 Cadmium 50 mM 48 hrs, 4-day adult  (40) Cadmium 100 mM 48 hrs, 4-day adult  (50) Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult  29 Ethanol 2.5% 3 hrs, larvae L3  (69) Ethanol 5% 3 hrs, larvae L3  30 Ethanol 10% 3 hrs, larvae L3  (33) Caffeine 1.5 mg/ml 4 hrs, larvae L3  27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (41) Caffeine 25 mg/ml 48 hrs, 4-day adult    20 Paraquat 5 mM 48 hrs, 4-day adult  (55) Paraquat 10 mM 48 hrs, 4-day adult  (66) Rotenone 2 μg 12 hrs, larvae L3  (36) Rotenone 8 μg 12 hrs, larvae L3  31 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    21 cold shock, 4-day adult    17 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    36 Cadmium 50 mM 12 hrs, larvae L3    31 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    50 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    69 Ethanol 5% 3 hrs, larvae L3    30 Ethanol 10% 3 hrs, larvae L3    33 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    41 Caffeine 25 mg/ml 48 hrs, 4-day adult    20 Paraquat 5 mM 48 hrs, 4-day adult    55 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    36 Rotenone 8 μg 12 hrs, larvae L3    31 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    21 cold shock, 4-day adult    17 heat shock, 4-day adult    44 Cadmium 50 mM 6 hrs, larvae L3    36 Cadmium 50 mM 12 hrs, larvae L3    31 Cadmium 50 mM 48 hrs, 4-day adult    40 Cadmium 100 mM 48 hrs, 4-day adult    50 Copper 0.5 mM 12 hrs, larvae L3    15 Copper 15 mM 48 hrs, 4-day adult    21 Zinc 5 mM 12 hrs, larvae L3    17 Zinc 4.5 mM 48 hrs, 4-day adult    29 Ethanol 2.5% 3 hrs, larvae L3    69 Ethanol 5% 3 hrs, larvae L3    30 Ethanol 10% 3 hrs, larvae L3    33 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    41 Caffeine 25 mg/ml 48 hrs, 4-day adult    20 Paraquat 5 mM 48 hrs, 4-day adult    55 Paraquat 10 mM 48 hrs, 4-day adult    66 Rotenone 2 μg 12 hrs, larvae L3    36 Rotenone 8 μg 12 hrs, larvae L3    31 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_03 mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	BDGP expression data • LP05054 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031590 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG3702-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | pupal stage, with Scer\GAL4pnr-MD237 CG3702GD882 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG3702 Class Mutagen Stocks Known lesion CG3702G19606 P-element activity 1 --
Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG3702 Class Mutagen Stocks Known lesion CG3702GD882 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG3702NIG.3702R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes CG3702TrojanHorse in vitro construct 0 Yes CG3702TrojanHorseΔ in vitro construct - deletion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel8011 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD882} NA P{NIG.3702R} NA characterization construct P{TrojanHorse} NA P{TrojanHorseΔ} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG3702G19606 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG3702 - CG1907 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG3702 - CG2789 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG3702 - CG4169 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG3702 - Hip1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG3702 - Rcd6 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG3702 - Saf-B anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG3702 - tor anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG3702 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 59825 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0031590 DroID - A comprehensive database of gene and protein interactions. • FBgn0031590 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33628
Orthologs
OrthoDB Orthologs (47) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6HQF3W Dipteran inclusive ortholog search EOG608NH6 Insect inclusive ortholog search EOG6JDG34 Arthropod inclusive ortholog search EOG66T1GR Metazoa inclusive ortholog search EOG6MSRRF
Orthologs in Drosophila Species (EOG6HQF3W)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG3702     Drosophila simulans   Dsim\GD11988 Y   Drosophila sechellia   Dsec\GM18101 Y   Drosophila erecta   Dere\GG24389 Y   Drosophila yakuba   Dyak\GE14759 Y   Drosophila ananassae   Dana\GF14857 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA17625 Y   Drosophila persimilis   Dper\GL16472 Y   Drosophila willistoni   Dwil\GK24449 Y   Drosophila virilis   Dvir\GJ16195 Y   Drosophila mojavensis   Dmoj\GI16103 Y   Drosophila grimshawi   Dgri\GH11708 Y
Orthologs in non-Drosophila Dipterans (EOG608NH6)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL006519   Anopheles gambiae Malaria mosquito  Agam\AGAP007926   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ801852
Orthologs in non-Dipteran Insects (EOG6JDG34)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB53088   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG007016   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH18228   Atta cephalotes Leafcutter ant  Acep\ACEP19500   Camponotus floridanus Florida carpenter ant  Cflo\CFLO21208   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL20911   Linepithema humile Argentine ant  Lhum\LH15903   Pogonomyrmex barbatus Red harvester ant  Pbar\PB18954   Solenopsis invicta Red fire ant  Sinv\SINV14651   Acyrthosiphon pisum Pea aphid  Apim\ACYPI001039   Bombyx mori Silkmoth  Bmor\BGIBMGA010658   Pediculus humanus Human body louse  Phum\PHUM350380   Tribolium castaneum Red flour beetle  Tcas\GLEAN_08245
Orthologs in non-Insect Arthropods (EOG66T1GR)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\Tax1bp1   Ixodes scapularis Deer tick  Isca\ISCW004037
Orthologs in non-Arthropod Metazoa (EOG6MSRRF)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\R166.2 Y Caenorhabditis elegans Nematode  Cele\C36B7.6 Y Caenorhabditis elegans Nematode  Cele\T13H5.8 Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_009645gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_001148gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_003209gn Y Danio rerio Zebrafish  Drer\clptm1 Y Danio rerio Zebrafish  Drer\clptm1l Y Xenopus tropicalis Western clawed frog  Xtro\ENSXETG00000033140 Y Xenopus tropicalis Western clawed frog  Xtro\clptm1l Y Gallus gallus Domestic chicken  Ggal\CLPTM1L Y Mus musculus House mouse  Mmus\Clptm1 Y Mus musculus House mouse  Mmus\Clptm1l Y Rattus norvegicus Norway rat  Rnor\Clptm1 Y Rattus norvegicus Norway rat  Rnor\Clptm1l Y Homo sapiens Human  Hsap\CLPTM1L Y Homo sapiens Human  Hsap\CLPTM1 Y
Human Orthologs (2)
Gene OMIM HGNC Hsap\CLPTM1L     Hsap\CLPTM1
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD11988 Drosophila sechellia Dsec\GM18101 Drosophila erecta Dere\GG24389 Drosophila yakuba Dyak\GE14759 Drosophila ananassae Dana\GF14857 Drosophila pseudoobscura pseudoobscura Dpse\GA17625 Drosophila persimilis Dper\GL16472 Drosophila willistoni Dwil\GK24449 Drosophila virilis Dvir\GJ16195 Drosophila mojavensis Dmoj\GI16103 Drosophila grimshawi Dgri\GH11708
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
Bloomington	27235 y1 w*; P{EP}CG3702G19606
VDRC	v7296 w1118 P{GD882}v7296
Genomic Clones ( 1 )
	BACR11D14 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 278 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LP05054
Other clones	DPiM_LP05054
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT05244 AT06811 AT06880 AT09286 AT09972 AT10190 AT10862 AT11293 AT11452 AT12895 AT13380 AT14351 AT15048 AT15691 AT17776 AT18391 AT18703 AT18829 AT19692 AT19804 AT22851 AT23063 AT27492 AT27541 AT28313 AT28385 AT28651 AT28779 AT28960 AT29215 AT29781 AT30565 AT31141 AT31713 GH08993 GH10027 GH16489 GM09732 GM17280 GM28336 LD18133 LP02427 LP02942 LP04848 LP04942 LP06701 LP11634 LP18077 LP24351 RE08365 RE09850 RE13682 RE24965 RE26355 RE28252 RE29343 RE33227 RE38862 RE39043 RE39140 RE39712 RE50580 RE51763 RE54444 RE54452 RE56817 RE58630 RE72626 RE74939 RH22016 RH22022 RH23035 RH23084 RH23095 RH24146 RH24730 RH27017 RH27664 RH28415 RH29516 RH29606 RH31057 RH36643 RH48339 RH50924 RH53752 RH57823 RH62778 RH64211 RH64885 RH72178 SD04612 SD04836 SD04945 SD06862 SD13151 SD19628 SD27485
Other clones	AT01276 bs07d11 bs43g03 bs71b03 Dmel_dig_009665_0687_3425 EC31589 EK059840 EK183153 EK223029 EK261164 EK284454 EP08839 EP19308 ESG015a.E21_E09 IP06314 RP003001958 RP003002560 RP003004059 RP003009887 RP003010743 RP003012062 RP003015916 RP003016510 RP003021544 RP003022936 RP003024550 RP003025945 RP003025948 RP003026161 RP003029110 RP003034536 RP003035176 RP003037676 RP003041235 RP003043892 RP003050576 RP003051936 RP003054676 RP003056568 RP003059765 RP003069357 RP003072004 RP003073952 RP003077545 RP003085836 RP003086844 RP003086936 RP003089591 RP003099431 RP003101882 RP003103873 RP003110651 RP003116332 RP003120154 RP003131344 RP003132022 RP003137957 RP003140750 RP003142495 RP003145370 RP003151313 RP003153488 RP003153570 RP003153603 RP003156373 RP003158009 RP003165737 RP003168689 RP003169911 RP003171124 RP003171384 RP003175538 RP003175712 RP003177531 RP003179424 RP003182164 RP003182819 RP003188118 RP003188816 RP003192294 RP003193013 RP003194105 RP003198036 RP003202030 RP003206750 RP003207556 RP003209194 RP003218082 RP003220581 RP003225137 RP003228773 RP003233550 RP003234727 RP003237005 RP003244030 RP003260208 RP003260816 RP003261950 RP003262922 RP003266517 RP003271877 RP003273445 RP003273508 RP003304200 RP003306344 RP003309123 RP003319671 RP003321768 RP003322660 RP003332488 RP003347946 RP003350282 RP003363634 RP003365972 RP003366009 RP003369221 RP003369439 RP003383823 RP003385847 RP003388452 RP003388822 RP003389227 RP003392021 RP003394556 RP003395135 RP003395343 RP003399775 RP003407273 RP003409148 RP003410617 RP003412281 RP003412406 RP003414208 RP003418100 RP003418155 RP003425122 RP003427358 RP003428544 RP003432465 RP003439084 RP003441595 RP003443430 RP003445770 RP003451839 RP003461048 RP003464498 RP003465476 RP003465957 RP003480436 RP003487801 RP003493440 RP003493829 RP003495365 RP003498566 RP003499890 RP003502517 RP003507371 RP003508471 RP003518051 RP003520729 RP003523051 RP003530863 RP003538380 RP003558194 RP003560870 RP003565899 RP003581990 RP003583996 RP003590496 RP003597557 RP003609428 RP003610472 RP003611029 RP003617396 RP003628732 RP003656640 RP003670143 RP003680302
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0031590 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33628
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_134975 NM_001273088 RefSeq (Proteins) • NP_608819 NP_001260017 DDBJ / EMBL / GenBank • AAF51035 AAK93464 AGB92553 AI260995 AI293382 AI944963 AW944036 AY052040 Entrez Gene - A searchable database of RefSeq genes. • 33628 UniProtKB/TrEMBL • Q9VQX6
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Cleft lip and palate transmembrane 1 (IPR008429) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LP05054
Linkouts
	BioGRID - A database of protein and genetic interactions • 59825 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0031590 DroID - A comprehensive database of gene and protein interactions. • FBgn0031590 DRSC - Results from RNAi screens. • FBgn0031590 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031590 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG3702-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0031590 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33628 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33628 modMine - Data generated by the modENCODE project. • FBgn0031590
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	CG3702 (Wittkopp et al., 2008, Mourikis et al., 2010, Japanese National Institute of Genetics, 2012.5.21) cg3702 (Gorchakov et al., 2010, Gorchakov et al., 2009)
Name Synonym
Secondary FlyBase IDs
References ( 20 )
Research paper	Baycin-Hizal et al., 2011, J. Proteome Res. 10(6): 2777--2784 GlycoFly: A Database of Drosophila N-linked Glycoproteins Identified Using SPEG-MS Techniques. [FBrf0213834] Blanco et al., 2010, BMC Dev. Biol. 10: 94 Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812] Gorchakov et al., 2010, Russ. J. Genet. 46(10): 1263--1266 Dosage compensation in drosophila: Sequence-specific initiation and sequence-independent spreading of MSL complex to the active genes on the male X chromosome. [FBrf0215196] Mourikis et al., 2010, BMC Dev. Biol. 10: 107 Modifiers of notch transcriptional activity identified by genome-wide RNAi. [FBrf0212287] Gorchakov et al., 2009, Genes Dev. 23(19): 2266--2271 Long-range spreading of dosage compensation in Drosophila captures transcribed autosomal genes inserted on X. [FBrf0209136] Freeman et al., 2003, Neuron 38(4): 567--580 Unwrapping glial biology: gcm target genes regulating glial development, diversification, and function. [FBrf0160527]
Supplementary material	Graveley et al., 2011, Nature 471(7339): Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Wittkopp et al., 2008, Nat. Genet. 40(3): Supplementary Information [FBrf0208881] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Bellen, 2009.4.8, BDGP_2009_0408.GenExel.xml BDGP_2009_0408.GenExel.xml [FBrf0207636] Mintseris et al., 2009.11.23, DPiM: the Drosophila Protein Interaction Mapping project DPiM: the Drosophila Protein Interaction Mapping project [FBrf0209452] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335] Oliver, 2001.8.16, Genome Res.: File from B. Oliver containing information on ESTs expressed in the Drosophila testis, described in Andrews et al., 2000, Genome Res. 10(12): 2030-2043 (FBrf0132348). [FBrf0137492] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file) Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
Stock list	Japanese National Institute of Genetics, 2012.5.21, RNAi stocks available from NIG-FLY. RNAi stocks available from NIG-FLY. [FBrf0218457]
Website	Fisher et al., 2012, BDGP insitu homepage BDGP insitu homepage [FBrf0219073]