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Gene Dmel\Oscillin

General Information
Symbol	Dmel\Oscillin	Species	D. melanogaster
Name	Oscillin	Annotation symbol	CG6957
Feature type	protein_coding_gene	FlyBase ID	FBgn0031717
Gene Model Status	Current	Stock availability	4 publicly available
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	25E6-25E6	Sequence location	2L:5,547,086..5,549,614 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Oscillin is referred to in FlyBase by the symbol Dmel\Oscillin (CG6957, FBgn0031717). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: glucosamine-6-phosphate deaminase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: carbohydrate metabolic process; N-acetylglucosamine metabolic process. 6 alleles are reported. No phenotypic data is available. It has 8 annotated transcripts and 8 annotated polypeptides. Protein features are: Glucosamine-6-phosphate isomerase; Glucosamine-6-phosphate isomerase, conserved site; Glucosamine/galactosamine-6-phosphate isomerase. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed within 06-18 hour embryonic stages, during late larval stages, at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval/adult Malpighian tubules, larval fat body. Expression at moderate levels in the following post-embryonic organs or tissues: adult crop, larval midgut, larval hindgut, adult heart, adult fat body, larval salivary gland, larval trachea, adult spermathecae, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1628828_s_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of Oscillin. Gene sequence location is 2L:5547086..5549614.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 25E6-25E6   Limits computationally determined from genome sequence between P{lacW}Hel25Ek11511 and P{lacW}l(2)k06502k06502
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Oscillin for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.45 Annotated transcripts do not represent all supported alternative splices within 5' UTR. Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Oscillin-RA FBtr0079101  NM_135094   1216   273 Oscillin-RB FBtr0079102  NM_164649   1529   273 Oscillin-RC FBtr0307060  NM_001258965   1206   273 Oscillin-RD FBtr0307061  NM_001258966   1156   272 Oscillin-RE FBtr0307062  NM_001258967   1586   266 Oscillin-RF FBtr0307063  NM_001258968   1388   273 Oscillin-RG FBtr0307064  NM_001258969   1413   272 Oscillin-RH FBtr0331675  NM_001273172   1299   273
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Oscillin-PA   FBpp0078734   30.8   273   6.18     NP_608938   AAF52263 Oscillin-PB   FBpp0078735   30.8   273   6.18     NP_723092   AAN10546 Oscillin-PC   FBpp0297903   30.8   273   6.18     NP_001245894   AFH03568 Oscillin-PD   FBpp0297904   30.8   272   6.59     NP_001245895   AFH03569 Oscillin-PE   FBpp0297905   30.0   266   6.51     NP_001245896   AFH03570 Oscillin-PF   FBpp0297906   30.8   273   6.18     NP_001245897   AFH03571 Oscillin-PG   FBpp0297907   30.8   272   6.59     NP_001245898   AFH03572 Oscillin-PH   FBpp0304065   30.8   273   6.18     NP_001260101   AGB92637
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Glucosamine-6-phosphate isomerase, conserved site (IPR018321) Glucosamine-6-phosphate isomerase (IPR004547) Glucosamine/galactosamine-6-phosphate isomerase (IPR006148)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014134 AAF52263   AE014134 AAN10546   AE014134 AFH03568   AE014134 AFH03569   AE014134 AFH03570   AE014134 AFH03571   AE014134 AFH03572   AE014134 AGB92637   AI259896   AI297060   AW944144   AY122220 AAM52732   BF486443   BF502120   BI213555   BI563555   BI575226   BI583107   BI587092   BX008955   BX012393   BX014157   BX016743   BX024134   BX030030   BX034337   BX065929   CA803740   CA803895   CA804166   CA804189   CA804467   CA804718   CA804722   CA806053   CA806372   CA806425   CA806486   CA806842   CA807439   CA807816   CK657255   CK659017   CO184005   CO191328   CO194537   CO295774   CO341380   CZ479436   CZ486894   CZ486895   EC236018   EC260418   GH748450   GH748481   GH749006   GH750499   GH750854   GH752596   GH753947   GH756040   GH757478   GH760701   GH760816   GH770145   GH770173   GH770703   GH771821   GH772606   GH777884   GH780224   GH784189   GH784625   GH785033   GH785507   GH787658   GH787921   GH788705   GH789343   GH789853   GH791255   GH791592   GH792880   GH793610   GH794630   GH794889   GH799818   GH800826   GH804806   GH804891   GH805524   GH806009   GH806655   GH807646   GH808811   GH810304   GH811157   GH813325   GH813656   GH814371   GH815996   GH816281   GH816448   GH817292   GH819173   GH820245   GH820621   GH821988   GH822554   GH823007   GH823413   GH825715   GH826455   GH828830   GH829547   GH830920   GH831127   GH831528   GH833357   GH833740   GH834043   GH834136   GH834354   GH834788   GH835377   GH839202   GH841083   GH844957   GH845770   GH851317   GH852959   GH854017   GH854687   GH857041   GH857313   GH857772   GH858209   GH860945   GH861590   GH863068   GH863906   GH864716   GH864889   GH865530   GH866292   GH868375   GH869236   GH869878   GH870968   GH871782   GH872033   GH872111   GH874558   GH875248   GH876002   GH876586   GH877116   GH877752   GH879167   GH879503   GH881841   GH883541   GH886508   GH887880   GH887973   GH889176   GH889406   GH889845   GH892290   GH892376   GH895940   GH895989   GH898051   GH899216   GH899304   GH899580   GH900990   GH902238   GH903630   GH903683   GH906395   GH907217   GH907247   GH908834   GH909604   GH910044   GH911236   GH911364   GH912988   GH913497   GH915036   GH915172   GH915247   GH915395   GH915572   GH918097   GH918325   GH922529   GH922628   GH923457   GH927350   GH929102   GH929461   GH930460   GH930513   GH932007   GH932842   GH933600   GH934355   GH935927   GH937780   GH938572
UniProtKB/Swiss-Prot	Q9VMP9
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 4 -- 6   yolk nucleus   (Fisher et al., 2012) embryonic stage 7 -- 8   anterior endoderm anlage   (Fisher et al., 2012) head mesoderm   (Fisher et al., 2012) yolk nucleus   (Fisher et al., 2012) embryonic stage 9 -- 10   anterior endoderm   (Fisher et al., 2012) head mesoderm   (Fisher et al., 2012) yolk nucleus   (Fisher et al., 2012) embryonic stage 11 -- 12   yolk nucleus   (Fisher et al., 2012) embryonic stage 13 -- 16   yolk nucleus   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval/adult Malpighian tubules, larval fat body. Expression at moderate levels in the following post-embryonic organs or tissues: adult crop, larval midgut, larval hindgut, adult heart, adult fat body, larval salivary gland, larval trachea, adult spermathecae, larval carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    81.05 Larval Midgut    250.4 Larval Hindgut    117.6 Larval Malpighian Tubules    1112.4 Larval Fat Body    1243.4 Larval Salivary Gland    116.6 Larval Trachea    140.5 Larval Carcass    229.825 Adult Head    98.4 Adult Eye    81.875 Adult Brain    94.3 Adult Thoracic-Abdominal Ganglion    82.9 Adult Crop    107.3 Adult Midgut    97.7 Adult Hindgut    65.6 Adult Malpighian Tubules    544.3 Adult Fat Body    147.2 Adult Salivary Gland    16.1 Adult Heart    137.325 Adult VirginFemale Spermatheca    323.2 Adult InseminatedFemale Spermatheca    245.4 Adult Ovary    12.5 Adult Testis    99.5 Adult Male Accessory Gland    7 Adult Carcass    97.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    81.05 Larval Midgut    250.4 Larval Hindgut    117.6 Larval Malpighian Tubules  (1112.4) Larval Fat Body  (1243.4) Larval Salivary Gland    116.6 Larval Trachea    140.5 Larval Carcass    229.825 Adult Head    98.4 Adult Eye    81.875 Adult Brain    94.3 Adult Thoracic-Abdominal Ganglion    82.9 Adult Crop    107.3 Adult Midgut    97.7 Adult Hindgut    65.6 Adult Malpighian Tubules  (544.3) Adult Fat Body    147.2 Adult Salivary Gland    16.1 Adult Heart    137.325 Adult VirginFemale Spermatheca    323.2 Adult InseminatedFemale Spermatheca    245.4 Adult Ovary    12.5 Adult Testis    99.5 Adult Male Accessory Gland    7 Adult Carcass    97.1 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    81.05 Larval Midgut    250.4 Larval Hindgut    117.6 Larval Malpighian Tubules  (1112.4) Larval Fat Body  (1243.4) Larval Salivary Gland    116.6 Larval Trachea    140.5 Larval Carcass    229.825 Adult Head    98.4 Adult Eye    81.875 Adult Brain    94.3 Adult Thoracic-Abdominal Ganglion    82.9 Adult Crop    107.3 Adult Midgut    97.7 Adult Hindgut    65.6 Adult Malpighian Tubules    544.3 Adult Fat Body    147.2 Adult Salivary Gland    16.1 Adult Heart    137.325 Adult VirginFemale Spermatheca    323.2 Adult InseminatedFemale Spermatheca    245.4 Adult Ovary    12.5 Adult Testis    99.5 Adult Male Accessory Gland    7 Adult Carcass    97.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    81.05 Larval Midgut    250.4 Larval Hindgut    117.6 Larval Malpighian Tubules    1112.4 Larval Fat Body    1243.4 Larval Salivary Gland    116.6 Larval Trachea    140.5 Larval Carcass    229.825 Adult Head    98.4 Adult Eye    81.875 Adult Brain    94.3 Adult Thoracic-Abdominal Ganglion    82.9 Adult Crop    107.3 Adult Midgut    97.7 Adult Hindgut    65.6 Adult Malpighian Tubules    544.3 Adult Fat Body    147.2 Adult Salivary Gland    16.1 Adult Heart    137.325 Adult VirginFemale Spermatheca    323.2 Adult InseminatedFemale Spermatheca    245.4 Adult Ovary    12.5 Adult Testis    99.5 Adult Male Accessory Gland    7 Adult Carcass    97.1 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    81.05 Larval Midgut    250.4 Larval Hindgut    117.6 Larval Malpighian Tubules    1112.4 Larval Fat Body    1243.4 Larval Salivary Gland    116.6 Larval Trachea    140.5 Larval Carcass    229.825 Adult Head    98.4 Adult Eye    81.875 Adult Brain    94.3 Adult Thoracic-Abdominal Ganglion    82.9 Adult Crop    107.3 Adult Midgut    97.7 Adult Hindgut    65.6 Adult Malpighian Tubules    544.3 Adult Fat Body    147.2 Adult Salivary Gland    16.1 Adult Heart    137.325 Adult VirginFemale Spermatheca    323.2 Adult InseminatedFemale Spermatheca    245.4 Adult Ovary    12.5 Adult Testis    99.5 Adult Male Accessory Gland    7 Adult Carcass    97.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    81.05 Larval Midgut    250.4 Larval Hindgut    117.6 Larval Malpighian Tubules  (1112.4) Larval Fat Body  (1243.4) Larval Salivary Gland    116.6 Larval Trachea    140.5 Larval Carcass    229.825 Adult Head    98.4 Adult Eye    81.875 Adult Brain    94.3 Adult Thoracic-Abdominal Ganglion    82.9 Adult Crop    107.3 Adult Midgut    97.7 Adult Hindgut    65.6 Adult Malpighian Tubules  544.3 Adult Fat Body    147.2 Adult Salivary Gland    16.1 Adult Heart    137.325 Adult VirginFemale Spermatheca    323.2 Adult InseminatedFemale Spermatheca    245.4 Adult Ovary    12.5 Adult Testis    99.5 Adult Male Accessory Gland    7 Adult Carcass    97.1 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    81.05 Larval Midgut    250.4 Larval Hindgut    117.6 Larval Malpighian Tubules  1112.4 Larval Fat Body  1243.4 Larval Salivary Gland    116.6 Larval Trachea    140.5 Larval Carcass    229.825 Adult Head    98.4 Adult Eye    81.875 Adult Brain    94.3 Adult Thoracic-Abdominal Ganglion    82.9 Adult Crop    107.3 Adult Midgut    97.7 Adult Hindgut    65.6 Adult Malpighian Tubules    544.3 Adult Fat Body    147.2 Adult Salivary Gland    16.1 Adult Heart    137.325 Adult VirginFemale Spermatheca    323.2 Adult InseminatedFemale Spermatheca    245.4 Adult Ovary    12.5 Adult Testis    99.5 Adult Male Accessory Gland    7 Adult Carcass    97.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    81.05 Larval Midgut    250.4 Larval Hindgut    117.6 Larval Malpighian Tubules    1112.4 Larval Fat Body    1243.4 Larval Salivary Gland    116.6 Larval Trachea    140.5 Larval Carcass    229.825 Adult Head    98.4 Adult Eye    81.875 Adult Brain    94.3 Adult Thoracic-Abdominal Ganglion    82.9 Adult Crop    107.3 Adult Midgut    97.7 Adult Hindgut    65.6 Adult Malpighian Tubules    544.3 Adult Fat Body    147.2 Adult Salivary Gland    16.1 Adult Heart    137.325 Adult VirginFemale Spermatheca    323.2 Adult InseminatedFemale Spermatheca    245.4 Adult Ovary    12.5 Adult Testis    99.5 Adult Male Accessory Gland    7 Adult Carcass    97.1 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    98.4   NA  Eye    81.875   NA  Brain    94.3   81.05  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    82.9   NA  Crop    107.3   250.4  Midgut    97.7   117.6  Hindgut    65.6   1112.4  Malpighian Tubules    544.3   1243.4  Fat Body    147.2   116.6  Salivary Gland    no informative data   NA  Heart    137.325   140.5  Trachea    NA   NA  VirginFemale Spermatheca    323.2   NA  InseminatedFemale Spermatheca    245.4   NA  Ovary    no informative data   NA  Testis    99.5   NA  Male Accessory Gland    7   229.825  Carcass    97.1 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    7 central nervous system, pupae P8    7 head, virgin 1-day female    5 head, virgin 4-day female    2 head, virgin 20-day female    5 head, mated 1-day female    2 head, mated 4-day female    4 head, mated 20-day female    4 head, mated 1-day male    5 head, mated 4-day male    5 head, mated 20-day male    7 salivary gland, larvae L3 wandering    48 salivary gland, white prepupae    32 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    9 digestive system, 4-day adult    5 digestive system, 20-day adult    4 fat body, larvae L3 wandering    16 fat body, white prepupae    10 fat body, pupae P8    49 carcass, larvae L3 wandering    22 carcass, 1-day adult    4 carcass, 4-day adult    4 carcass, 20-day adult    4 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    7 accessory gland, mated 4-day male    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    7 central nervous system, pupae P8    7 head, virgin 1-day female    5 head, virgin 4-day female    2 head, virgin 20-day female    5 head, mated 1-day female    2 head, mated 4-day female    4 head, mated 20-day female    4 head, mated 1-day male    5 head, mated 4-day male    5 head, mated 20-day male    7 salivary gland, larvae L3 wandering  (48) salivary gland, white prepupae  (32) digestive system, larvae L3 wandering  (30) digestive system, 1-day adult    9 digestive system, 4-day adult    5 digestive system, 20-day adult    4 fat body, larvae L3 wandering    16 fat body, white prepupae    10 fat body, pupae P8  (49) carcass, larvae L3 wandering    22 carcass, 1-day adult    4 carcass, 4-day adult    4 carcass, 20-day adult    4 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    7 accessory gland, mated 4-day male    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    7 central nervous system, pupae P8    7 head, virgin 1-day female    5 head, virgin 4-day female    2 head, virgin 20-day female    5 head, mated 1-day female    2 head, mated 4-day female    4 head, mated 20-day female    4 head, mated 1-day male    5 head, mated 4-day male    5 head, mated 20-day male    7 salivary gland, larvae L3 wandering    48 salivary gland, white prepupae    32 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    9 digestive system, 4-day adult    5 digestive system, 20-day adult    4 fat body, larvae L3 wandering    16 fat body, white prepupae    10 fat body, pupae P8    49 carcass, larvae L3 wandering    22 carcass, 1-day adult    4 carcass, 4-day adult    4 carcass, 20-day adult    4 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    7 accessory gland, mated 4-day male    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    7 central nervous system, pupae P8    7 head, virgin 1-day female    5 head, virgin 4-day female    2 head, virgin 20-day female    5 head, mated 1-day female    2 head, mated 4-day female    4 head, mated 20-day female    4 head, mated 1-day male    5 head, mated 4-day male    5 head, mated 20-day male    7 salivary gland, larvae L3 wandering    48 salivary gland, white prepupae    32 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    9 digestive system, 4-day adult    5 digestive system, 20-day adult    4 fat body, larvae L3 wandering    16 fat body, white prepupae    10 fat body, pupae P8    49 carcass, larvae L3 wandering    22 carcass, 1-day adult    4 carcass, 4-day adult    4 carcass, 20-day adult    4 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    7 accessory gland, mated 4-day male    2 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    7 central nervous system, pupae P8    7 head, virgin 1-day female    5 head, virgin 4-day female    2 head, virgin 20-day female    5 head, mated 1-day female    2 head, mated 4-day female    4 head, mated 20-day female    4 head, mated 1-day male    5 head, mated 4-day male    5 head, mated 20-day male    7 salivary gland, larvae L3 wandering    48 salivary gland, white prepupae    32 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    9 digestive system, 4-day adult    5 digestive system, 20-day adult    4 fat body, larvae L3 wandering    16 fat body, white prepupae    10 fat body, pupae P8    49 carcass, larvae L3 wandering    22 carcass, 1-day adult    4 carcass, 4-day adult    4 carcass, 20-day adult    4 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    7 accessory gland, mated 4-day male    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    7 central nervous system, pupae P8    7 head, virgin 1-day female    5 head, virgin 4-day female    2 head, virgin 20-day female    5 head, mated 1-day female    2 head, mated 4-day female    4 head, mated 20-day female    4 head, mated 1-day male    5 head, mated 4-day male    5 head, mated 20-day male    7 salivary gland, larvae L3 wandering  (48) salivary gland, white prepupae  32 digestive system, larvae L3 wandering  30 digestive system, 1-day adult    9 digestive system, 4-day adult    5 digestive system, 20-day adult    4 fat body, larvae L3 wandering    16 fat body, white prepupae    10 fat body, pupae P8  (49) carcass, larvae L3 wandering    22 carcass, 1-day adult    4 carcass, 4-day adult    4 carcass, 20-day adult    4 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    7 accessory gland, mated 4-day male    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    7 central nervous system, pupae P8    7 head, virgin 1-day female    5 head, virgin 4-day female    2 head, virgin 20-day female    5 head, mated 1-day female    2 head, mated 4-day female    4 head, mated 20-day female    4 head, mated 1-day male    5 head, mated 4-day male    5 head, mated 20-day male    7 salivary gland, larvae L3 wandering    48 salivary gland, white prepupae    32 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    9 digestive system, 4-day adult    5 digestive system, 20-day adult    4 fat body, larvae L3 wandering    16 fat body, white prepupae    10 fat body, pupae P8    49 carcass, larvae L3 wandering    22 carcass, 1-day adult    4 carcass, 4-day adult    4 carcass, 20-day adult    4 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    7 accessory gland, mated 4-day male    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    12 central nervous system, larvae L3    7 central nervous system, pupae P8    7 head, virgin 1-day female    5 head, virgin 4-day female    2 head, virgin 20-day female    5 head, mated 1-day female    2 head, mated 4-day female    4 head, mated 20-day female    4 head, mated 1-day male    5 head, mated 4-day male    5 head, mated 20-day male    7 salivary gland, larvae L3 wandering    48 salivary gland, white prepupae    32 digestive system, larvae L3 wandering    30 digestive system, 1-day adult    9 digestive system, 4-day adult    5 digestive system, 20-day adult    4 fat body, larvae L3 wandering    16 fat body, white prepupae    10 fat body, pupae P8    49 carcass, larvae L3 wandering    22 carcass, 1-day adult    4 carcass, 4-day adult    4 carcass, 20-day adult    4 ovary, virgin 4-day female    0 ovary, mated 4-day female    0 testis, mated 4-day male    7 accessory gland, mated 4-day male    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed within 06-18 hour embryonic stages, during late larval stages, at stages throughout the pupal period. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    6 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    53 embryo 10-12hr    94 embryo 12-14hr    53 embryo 14-16hr    14 embryo 16-18hr    8 embryo 18-20hr    5 embryo 20-22hr    6 embryo 22-24hr    10 larva L1    13 larva L2    17 larva L3 12hr old    13 larva L3 puffstage 1-2    41 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    79 white prepupae new    49 white prepupae 12hr    95 white prepupae 24hr    53 pupae 2d postWPP    46 pupae 3d postWPP    51 pupae 4d postWPP    47 adult male 01day    13 adult male 05day    12 adult male 30day    10 adult female 01day    7 adult female 05day    6 adult female 30day    6 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    6 embryo 04-06hr    19 embryo 06-08hr  (27) embryo 08-10hr  (53) embryo 10-12hr  (94) embryo 12-14hr  (53) embryo 14-16hr    14 embryo 16-18hr    8 embryo 18-20hr    5 embryo 20-22hr    6 embryo 22-24hr    10 larva L1    13 larva L2    17 larva L3 12hr old    13 larva L3 puffstage 1-2  (41) larva L3 puffstage 3-6  (57) larva L3 puffstage 7-9  (79) white prepupae new  (49) white prepupae 12hr  (95) white prepupae 24hr  (53) pupae 2d postWPP  (46) pupae 3d postWPP  (51) pupae 4d postWPP  (47) adult male 01day    13 adult male 05day    12 adult male 30day    10 adult female 01day    7 adult female 05day    6 adult female 30day    6 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    6 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    53 embryo 10-12hr    94 embryo 12-14hr    53 embryo 14-16hr    14 embryo 16-18hr    8 embryo 18-20hr    5 embryo 20-22hr    6 embryo 22-24hr    10 larva L1    13 larva L2    17 larva L3 12hr old    13 larva L3 puffstage 1-2    41 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    79 white prepupae new    49 white prepupae 12hr    95 white prepupae 24hr    53 pupae 2d postWPP    46 pupae 3d postWPP    51 pupae 4d postWPP    47 adult male 01day    13 adult male 05day    12 adult male 30day    10 adult female 01day    7 adult female 05day    6 adult female 30day    6 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    6 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    53 embryo 10-12hr    94 embryo 12-14hr    53 embryo 14-16hr    14 embryo 16-18hr    8 embryo 18-20hr    5 embryo 20-22hr    6 embryo 22-24hr    10 larva L1    13 larva L2    17 larva L3 12hr old    13 larva L3 puffstage 1-2    41 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    79 white prepupae new    49 white prepupae 12hr    95 white prepupae 24hr    53 pupae 2d postWPP    46 pupae 3d postWPP    51 pupae 4d postWPP    47 adult male 01day    13 adult male 05day    12 adult male 30day    10 adult female 01day    7 adult female 05day    6 adult female 30day    6 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    6 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    53 embryo 10-12hr    94 embryo 12-14hr    53 embryo 14-16hr    14 embryo 16-18hr    8 embryo 18-20hr    5 embryo 20-22hr    6 embryo 22-24hr    10 larva L1    13 larva L2    17 larva L3 12hr old    13 larva L3 puffstage 1-2    41 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    79 white prepupae new    49 white prepupae 12hr    95 white prepupae 24hr    53 pupae 2d postWPP    46 pupae 3d postWPP    51 pupae 4d postWPP    47 adult male 01day    13 adult male 05day    12 adult male 30day    10 adult female 01day    7 adult female 05day    6 adult female 30day    6 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    6 embryo 04-06hr    19 embryo 06-08hr  27 embryo 08-10hr  (53) embryo 10-12hr  (94) embryo 12-14hr  (53) embryo 14-16hr    14 embryo 16-18hr    8 embryo 18-20hr    5 embryo 20-22hr    6 embryo 22-24hr    10 larva L1    13 larva L2    17 larva L3 12hr old    13 larva L3 puffstage 1-2  (41) larva L3 puffstage 3-6  (57) larva L3 puffstage 7-9  (79) white prepupae new  (49) white prepupae 12hr  (95) white prepupae 24hr  (53) pupae 2d postWPP  (46) pupae 3d postWPP  (51) pupae 4d postWPP  (47) adult male 01day    13 adult male 05day    12 adult male 30day    10 adult female 01day    7 adult female 05day    6 adult female 30day    6 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    6 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    53 embryo 10-12hr    94 embryo 12-14hr    53 embryo 14-16hr    14 embryo 16-18hr    8 embryo 18-20hr    5 embryo 20-22hr    6 embryo 22-24hr    10 larva L1    13 larva L2    17 larva L3 12hr old    13 larva L3 puffstage 1-2    41 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    79 white prepupae new    49 white prepupae 12hr    95 white prepupae 24hr    53 pupae 2d postWPP    46 pupae 3d postWPP    51 pupae 4d postWPP    47 adult male 01day    13 adult male 05day    12 adult male 30day    10 adult female 01day    7 adult female 05day    6 adult female 30day    6 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1 embryo 02-04hr    6 embryo 04-06hr    19 embryo 06-08hr    27 embryo 08-10hr    53 embryo 10-12hr    94 embryo 12-14hr    53 embryo 14-16hr    14 embryo 16-18hr    8 embryo 18-20hr    5 embryo 20-22hr    6 embryo 22-24hr    10 larva L1    13 larva L2    17 larva L3 12hr old    13 larva L3 puffstage 1-2    41 larva L3 puffstage 3-6    57 larva L3 puffstage 7-9    79 white prepupae new    49 white prepupae 12hr    95 white prepupae 24hr    53 pupae 2d postWPP    46 pupae 3d postWPP    51 pupae 4d postWPP    47 adult male 01day    13 adult male 05day    12 adult male 30day    10 adult female 01day    7 adult female 05day    6 adult female 30day    6 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    3 embryonic 1182-4H    3 embryonic GM2    5 embryonic Kc167    3 embryonic S1    10 embryonic S3    4 leg disc CME L1    2 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    3 wing disc ML-DmD16-c3    2 wing disc ML-DmD21    4 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    6 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    1 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    3 ovary fGS/OSS    2 ovary OSC    3 ovary OSS    2 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    3 embryonic 1182-4H    3 embryonic GM2    5 embryonic Kc167    3 embryonic S1    10 embryonic S3    4 leg disc CME L1    2 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    3 wing disc ML-DmD16-c3    2 wing disc ML-DmD21    4 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    6 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    1 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    3 ovary fGS/OSS    2 ovary OSC    3 ovary OSS    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    3 embryonic 1182-4H    3 embryonic GM2    5 embryonic Kc167    3 embryonic S1    10 embryonic S3    4 leg disc CME L1    2 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    3 wing disc ML-DmD16-c3    2 wing disc ML-DmD21    4 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    6 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    1 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    3 ovary fGS/OSS    2 ovary OSC    3 ovary OSS    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    3 embryonic 1182-4H    3 embryonic GM2    5 embryonic Kc167    3 embryonic S1    10 embryonic S3    4 leg disc CME L1    2 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    3 wing disc ML-DmD16-c3    2 wing disc ML-DmD21    4 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    6 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    1 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    3 ovary fGS/OSS    2 ovary OSC    3 ovary OSS    2 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    3 embryonic 1182-4H    3 embryonic GM2    5 embryonic Kc167    3 embryonic S1    10 embryonic S3    4 leg disc CME L1    2 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    3 wing disc ML-DmD16-c3    2 wing disc ML-DmD21    4 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    6 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    1 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    3 ovary fGS/OSS    2 ovary OSC    3 ovary OSS    2 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    3 embryonic 1182-4H    3 embryonic GM2    5 embryonic Kc167    3 embryonic S1    10 embryonic S3    4 leg disc CME L1    2 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    3 wing disc ML-DmD16-c3    2 wing disc ML-DmD21    4 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    6 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    1 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    3 ovary fGS/OSS    2 ovary OSC    3 ovary OSS    2 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    3 embryonic 1182-4H    3 embryonic GM2    5 embryonic Kc167    3 embryonic S1    10 embryonic S3    4 leg disc CME L1    2 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    3 wing disc ML-DmD16-c3    2 wing disc ML-DmD21    4 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    6 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    1 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    3 ovary fGS/OSS    2 ovary OSC    3 ovary OSS    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    8 Schneider line 2 Sg4    3 embryonic 1182-4H    3 embryonic GM2    5 embryonic Kc167    3 embryonic S1    10 embryonic S3    4 leg disc CME L1    2 wing disc CME-W2    0 wing disc ML-DmD8    0 wing disc ML-DmD9    3 wing disc ML-DmD16-c3    2 wing disc ML-DmD21    4 wing disc ML-DmD32    3 haltere disc ML-DmD17-c3    6 eye-antennal disc ML-DmD11    4 antennal disc ML-DmD20-c5    6 mixed discs ML-DmD4-c1    3 CNS ML-DmBG1-c1    1 CNS ML-DmBG2-c2    4 tumorous blood cells mbn2    3 ovary fGS/OSS    2 ovary OSC    3 ovary OSS    2 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    8 Cadmium 50 mM 6 hrs, larvae L3    11 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    9 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    9 Copper 15 mM 48 hrs, 4-day adult    3 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    4 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    24 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    3 Rotenone 2 μg 12 hrs, larvae L3    23 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    8 Cadmium 50 mM 6 hrs, larvae L3    11 Cadmium 50 mM 12 hrs, larvae L3  (35) Cadmium 50 mM 48 hrs, 4-day adult    9 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    9 Copper 15 mM 48 hrs, 4-day adult    3 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    4 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    24 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    3 Rotenone 2 μg 12 hrs, larvae L3    23 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    8 Cadmium 50 mM 6 hrs, larvae L3    11 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    9 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    9 Copper 15 mM 48 hrs, 4-day adult    3 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    4 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    24 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    3 Rotenone 2 μg 12 hrs, larvae L3    23 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    8 Cadmium 50 mM 6 hrs, larvae L3    11 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    9 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    9 Copper 15 mM 48 hrs, 4-day adult    3 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    4 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    24 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    3 Rotenone 2 μg 12 hrs, larvae L3    23 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    8 Cadmium 50 mM 6 hrs, larvae L3    11 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    9 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    9 Copper 15 mM 48 hrs, 4-day adult    3 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    4 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    24 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    3 Rotenone 2 μg 12 hrs, larvae L3    23 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    8 Cadmium 50 mM 6 hrs, larvae L3    11 Cadmium 50 mM 12 hrs, larvae L3  (35) Cadmium 50 mM 48 hrs, 4-day adult    9 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    9 Copper 15 mM 48 hrs, 4-day adult    3 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    4 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    24 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    3 Rotenone 2 μg 12 hrs, larvae L3    23 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    8 Cadmium 50 mM 6 hrs, larvae L3    11 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    9 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    9 Copper 15 mM 48 hrs, 4-day adult    3 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    4 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    24 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    3 Rotenone 2 μg 12 hrs, larvae L3    23 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    5 cold shock, 4-day adult    5 heat shock, 4-day adult    8 Cadmium 50 mM 6 hrs, larvae L3    11 Cadmium 50 mM 12 hrs, larvae L3    35 Cadmium 50 mM 48 hrs, 4-day adult    9 Cadmium 100 mM 48 hrs, 4-day adult    4 Copper 0.5 mM 12 hrs, larvae L3    9 Copper 15 mM 48 hrs, 4-day adult    3 Zinc 5 mM 12 hrs, larvae L3    5 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    4 Ethanol 5% 3 hrs, larvae L3    12 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    24 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    2 Caffeine 25 mg/ml 48 hrs, 4-day adult    3 Paraquat 5 mM 48 hrs, 4-day adult    4 Paraquat 10 mM 48 hrs, 4-day adult    3 Rotenone 2 μg 12 hrs, larvae L3    23 Rotenone 8 μg 12 hrs, larvae L3    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_25
External Data & Images
Linkouts	BDGP expression data • LP11234 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031717 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6957-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for Oscillin Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of Oscillin Class Mutagen Stocks Known lesion Oscilline01629 piggyBac transposase 1 -- OscillinEY01635 P-element activity 1 -- Oscillinf04360 piggyBac transposase 1 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Oscillin Class Mutagen Stocks Known lesion OscillinKK102245 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes OscillinGD12088 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes OscillinNIG.6957R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel6012 (Ryder, 2004.4.26) Df(2L)Exel7023 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD12088} NA P{KK102245} NA P{NIG.6957R} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{GT1}CG14017BG01837 NA PBac{RB}Oscilline01629 NA PBac{WH}Oscillinf04360 NA insertion of mobile activating element P{EPgy2}OscillinEY01635 NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
glucosamine-6-phosphate deaminase activity inferred from sequence or structural similarity with EMBL:AF088903 (FlyBase, 1992-)
Biological Process
CV term Evidence References
carbohydrate metabolic process inferred from electronic annotation with InterPro:IPR006148 (FlyBase Curators et al., 2004-) N-acetylglucosamine metabolic process inferred from electronic annotation with InterPro:IPR004547, InterPro:IPR018321 (FlyBase Curators et al., 2004-)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
Oscillin - 4EHP experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting (Guruharsha et al., 2011, Mintseris et al., 2009.11.23) Oscillin - AnxB10 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - Arp2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - Arpc1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - Arpc3A anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - Atg4 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - CG11095 experimental knowledge based, anti tag coimmunoprecipitation, peptide massfingerprinting (Guruharsha et al., 2011, Mintseris et al., 2009.11.23) Oscillin - CG11148 experimental knowledge based (Guruharsha et al., 2011) Oscillin - CG15643 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - CG2199 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - CG3501 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - CG3505 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - CG7544 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - CG8300 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - CG9581 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - Cyt-c-p anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - Df31 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - Dlc90F anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - E(spl)mγ-HLH anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - Hsc70-1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - ImpL3 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - Jon65Aiv anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - MED30 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - PSR experimental knowledge based (Guruharsha et al., 2011) Oscillin - Prosα7 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - RPA2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - Tim8 experimental knowledge based (Guruharsha et al., 2011) Oscillin - abs anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - mus209 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - nwk experimental knowledge based (Guruharsha et al., 2011) Oscillin - santa-maria anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - skpA anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) Oscillin - spheroide anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Oscillin allele Gene References
External Data
Linkouts	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0031717 DroID - A comprehensive database of gene and protein interactions. • FBgn0031717 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33783
Orthologs
OrthoDB Orthologs (45) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG64MZC6 Dipteran inclusive ortholog search EOG6TMR9X Insect inclusive ortholog search EOG6SBCTT Arthropod inclusive ortholog search EOG60P2PM Metazoa inclusive ortholog search EOG647TNB
Orthologs in Drosophila Species (EOG64MZC6)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Oscillin     Drosophila sechellia   Dsec\GM18555 Y   Drosophila erecta   Dere\GG25080 Y   Drosophila yakuba   Dyak\GE25482 Y   Drosophila ananassae   Dana\GF15148 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA19983 Y   Drosophila persimilis   Dper\GL25853 Y   Drosophila willistoni   Dwil\GK21107 Y   Drosophila virilis   Dvir\GJ19587 Y   Drosophila mojavensis   Dmoj\GI17992 Y   Drosophila grimshawi   Dgri\GH10296 Y
Orthologs in non-Drosophila Dipterans (EOG6TMR9X)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\Gnpda1   Anopheles gambiae Malaria mosquito  Agam\AGAP009305   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ801588
Orthologs in non-Dipteran Insects (EOG6SBCTT)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\Oscillin   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG012452   Acromyrmex echinatior Panamanian leafcutter ant  Aech\nagB   Atta cephalotes Leafcutter ant  Acep\nagB   Camponotus floridanus Florida carpenter ant  Cflo\nagB   Harpegnathos saltator Jerdons jumping ant  Hsal\nagB   Linepithema humile Argentine ant  Lhum\LH22011   Pogonomyrmex barbatus Red harvester ant  Pbar\PB16111   Solenopsis invicta Red fire ant  Sinv\SINV11755   Acyrthosiphon pisum Pea aphid  Apim\ACYPI009259   Bombyx mori Silkmoth  Bmor\BGIBMGA009467   Pediculus humanus Human body louse  Phum\PHUM618470   Pediculus humanus Human body louse  Phum\PHUM432570   Tribolium castaneum Red flour beetle  Tcas\TC002924   Tribolium castaneum Red flour beetle  Tcas\GLEAN_07627
Orthologs in non-Insect Arthropods (EOG60P2PM)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\btub   Ixodes scapularis Deer tick  Isca\ISCW018498
Orthologs in non-Arthropod Metazoa (EOG647TNB)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\T03F6.3   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_019166gn   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_021685gn   Danio rerio Zebrafish  Drer\OTTDARG00000028396   Danio rerio Zebrafish  Drer\gnpda1   Xenopus tropicalis Western clawed frog  Xtro\gnpda1   Xenopus tropicalis Western clawed frog  Xtro\gnpda2   Gallus gallus Domestic chicken  Ggal\GNPDA2   Gallus gallus Domestic chicken  Ggal\GNPDA1   Mus musculus House mouse  Mmus\Gnpda2   Mus musculus House mouse  Mmus\Gnpda1   Rattus norvegicus Norway rat  Rnor\Gnpda2   Homo sapiens Human  Hsap\GNPDA2   Homo sapiens Human  Hsap\GNPDA1
Human Orthologs (2)
Gene OMIM HGNC Hsap\GNPDA2     Hsap\GNPDA1
AAA Orthologs (10) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila sechellia Dsec\GM18555 Drosophila erecta Dere\GG25080 Drosophila yakuba Dyak\GE25482 Drosophila ananassae Dana\GF15148 Drosophila pseudoobscura pseudoobscura Dpse\GA19983 Drosophila persimilis Dper\GL25853 Drosophila willistoni Dwil\GK21107 Drosophila virilis Dvir\GJ19587 Drosophila mojavensis Dmoj\GI17992 Drosophila grimshawi Dgri\GH10296
Stocks & Reagents
Stocks Listed in FlyBase ( 4 )
Bloomington	15524 y1 w67c23; P{EPgy2}OscillinEY01635
Harvard	- PBac{RB}Oscilline01629 - PBac{WH}Oscillinf04360
VDRC	v106685 P{KK102245}VIE-260B
Genomic Clones ( 2 )
	BACR35L07 BACR44J04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 190 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LP11234
Other clones	DPiM_LP11234
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT17754 AT20738 LP03417 LP16429 LP23395 RE18977 RH21560 RH29743 RH34208
Other clones	EC26886 EC30713 EC38725 EK211547 EP12344 ESG013a.E21.1_C08 ESG013b.E21_C07 ESG013c.E21_E06 ESG015b.E21_B12 ESG017d.E21_H04 ESG019d.E21_A04 ESG0110b.E21_E07 ESG0111a.B21.1_F03 ESG0112b.B21_F05 ESG0112c.B21.1_A05 ESG0113c.B21.1_H06 ESG0114d.B21_H08 ESG0114d.B21_H12 ESG0120d.B21_C10 RH27360 RP003008240 RP003008362 RP003008966 RP003011437 RP003013813 RP003015237 RP003017218 RP003019819 RP003026046 RP003027995 RP003030760 RP003034125 RP003035891 RP003042487 RP003047215 RP003049115 RP003060143 RP003060322 RP003064631 RP003066283 RP003070593 RP003077014 RP003085171 RP003086786 RP003089812 RP003098485 RP003100659 RP003103043 RP003105481 RP003108229 RP003108775 RP003110388 RP003125582 RP003128499 RP003131910 RP003133747 RP003138346 RP003140079 RP003144562 RP003144656 RP003145142 RP003148721 RP003155880 RP003161464 RP003164821 RP003175334 RP003176913 RP003177364 RP003177659 RP003179437 RP003181835 RP003182384 RP003183441 RP003190282 RP003190465 RP003205939 RP003208673 RP003210215 RP003212571 RP003214239 RP003220565 RP003225135 RP003227343 RP003227408 RP003227696 RP003230195 RP003231887 RP003237637 RP003238131 RP003252291 RP003253191 RP003255103 RP003258017 RP003259964 RP003261133 RP003265245 RP003267069 RP003267263 RP003269718 RP003270696 RP003271251 RP003272885 RP003283317 RP003286479 RP003288797 RP003302929 RP003309424 RP003326652 RP003328942 RP003331318 RP003332977 RP003335885 RP003336430 RP003339585 RP003339784 RP003346001 RP003354419 RP003365804 RP003370175 RP003371639 RP003374298 RP003383620 RP003383675 RP003386579 RP003387089 RP003393785 RP003399980 RP003400118 RP003402951 RP003410967 RP003414067 RP003419902 RP003421386 RP003425251 RP003428098 RP003429862 RP003434394 RP003435730 RP003438740 RP003439556 RP003440926 RP003449955 RP003452777 RP003458841 RP003459494 RP003460353 RP003468945 RP003469016 RP003471451 RP003490434 RP003492380 RP003493291 RP003495799 RP003497568 RP003510089 RP003517873 RP003521703 RP003526609 RP003527099 RP003531236 RP003534396 RP003537978 RP003542394 RP003547307 RP003547987 RP003548842 RP003556102 RP003559955 RP003563808 RP003584960 RP003600761 RP003601159 RP003607534 RP003611631 RP003624517 RP003641515 RP003651694 RP003653439 RP003681053
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0031717 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33783
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Oscillin CG6957 (Nakamura et al., 2000)
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_135094 NM_164649 NM_001258965 NM_001258966 NM_001258967 NM_001258968 NM_001258969 NM_001273172 RefSeq (Proteins) • NP_608938 NP_723092 NP_001245894 NP_001245895 NP_001245896 NP_001245897 NP_001245898 NP_001260101 DDBJ / EMBL / GenBank • AAF52263 AAM52732 AAN10546 AFH03568 AFH03569 AFH03570 AFH03571 AFH03572 AGB92637 AI259896 AI297060 AW944144 AY122220 BI587092 CZ479436 CZ486894 CZ486895 Entrez Gene - A searchable database of RefSeq genes. • 33783 UniProtKB/Swiss-Prot • Q9VMP9
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Glucosamine-6-phosphate isomerase, conserved site (IPR018321) Glucosamine-6-phosphate isomerase (IPR004547) Glucosamine/galactosamine-6-phosphate isomerase (IPR006148) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LP11234
Linkouts
	DPiM - DPiM, Drosophila Protein interaction Map • FBgn0031717 DroID - A comprehensive database of gene and protein interactions. • FBgn0031717 DRSC - Results from RNAi screens. • FBgn0031717 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031717 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG6957-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0031717 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33783 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33783 modMine - Data generated by the modENCODE project. • FBgn0031717
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	CG6957 (Keleman et al., 2009.8.5, Juhász et al., 2007) Oscillin (Japanese National Institute of Genetics, 2012.5.21)
Name Synonym	Oscillin (Ayroles et al., 2009, Zimek and Weber, 2011) oscillin (Ferjoux et al., 2007)
Secondary FlyBase IDs
References ( 21 )
Generate a list of	All references relating to this gene ( 21 )
List References by type	Research paper  ( 6 ) Supplementary material  ( 3 ) Personal communication to FlyBase  ( 7 ) FlyBase analysis  ( 1 ) Stock list  ( 1 ) Website  ( 1 ) Curated genome annotation  ( 1 )
Recent research papers ( 1 )
	Zimek and Weber, 2011, Europ. J. Cell Biol. 90(4): 356--364 Flanking genes of an essential gene give information about the evolution of metazoa. [FBrf0213069] Show all research papers ...