FB2019_05, released Oct 15, 2019

Gene: Dmel\Oscillin

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General Information
Symbol
Dmel\Oscillin
Species
D. melanogaster
Name
Oscillin
Annotation Symbol
CG6957
Feature Type
protein_coding_gene
FlyBase ID
FBgn0031717
Gene Model Status
Current
Stock Availability
5 publicly available
Enzyme Name (EC)
Glucosamine-6-phosphate deaminase (3.5.99.6)
Gene Snapshot
Insufficient genetic data for FlyBase to solicit a summary. [Date last reviewed: 2016-06-30]
Other Summaries
Key Links
Genomic Location
Cytogenetic map
25E6-25E6
Sequence location
2L:5,547,086..5,549,614 [+]
Recombination map
2-17
Sequence
Get Decorated FASTA
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
NCBI
UCSC
Ensembl
PopFly
Function
GO Summary Ribbons
Gene Group (FlyBase)
Protein Family (UniProt)
Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. (Q9VMP9)
Protein Signatures (InterPro)
Molecular Function (GO)
[Detailed GO annotations]
Experimental Evidence
-
Predictions / Assertions
glucosamine-6-phosphate deaminase activity; identical protein binding
Catalytic Activity (EC)
Experimental Evidence
-
Predictions / Assertions
Alpha-D-glucosamine 6-phosphate + H(2)O = D-fructose 6-phosphate + NH(3) (3.5.99.6)
Summaries
Gene Group (FlyBase)
INTRAMOLECULAR OXIDOREDUCTASES INTERCONVERTING ALDOSES AND KETOSES -
Intramolecular oxidoreductases interconverting aldoses and ketoses catalyze the oxidation of one part of an aldose or ketose molecule and the concurrent reduction of another part of the same molecule. (Adapted from FBrf0238665.)
Gene Model and Products
Number of Transcripts
8
Number of Unique Polypeptides
3

Please see the GBrowse view of Dmel\Oscillin or the JBrowse view of Dmel\Oscillin for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Comments on Gene Model
Annotated transcripts do not represent all supported alternative splices within 5' UTR.
Annotated transcripts do not represent all possible combinations of alternative exons and/or alternative promoters.
Gene model reviewed during 5.45
Sequence Ontology: Class of Gene
nuclear_gene
protein_coding_gene
Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
Oscillin-RA
FBtr0079101
NM_135094
1216
273
Oscillin-RB
FBtr0079102
NM_164649
1529
273
Oscillin-RC
FBtr0307060
NM_001258965
1206
273
Oscillin-RD
FBtr0307061
NM_001258966
1156
272
Oscillin-RE
FBtr0307062
NM_001258967
1586
266
Oscillin-RF
FBtr0307063
NM_001258968
1388
273
Oscillin-RG
FBtr0307064
NM_001258969
1413
272
Oscillin-RH
FBtr0331675
NM_001273172
1299
273
Additional Transcript Data and Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank
Oscillin-PA
FBpp0078734
30.8
273
6.18
NP_608938
AAF52263
Oscillin-PB
FBpp0078735
30.8
273
6.18
NP_723092
AAN10546
Oscillin-PC
FBpp0297903
30.8
273
6.18
NP_001245894
AFH03568
Oscillin-PD
FBpp0297904
30.8
272
6.59
NP_001245895
AFH03569
Oscillin-PE
FBpp0297905
30.0
266
6.51
NP_001245896
AFH03570
Oscillin-PF
FBpp0297906
30.8
273
6.18
NP_001245897
AFH03571
Oscillin-PG
FBpp0297907
30.8
272
6.59
NP_001245898
AFH03572
Oscillin-PH
FBpp0304065
30.8
273
6.18
NP_001260101
AGB92637
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

273 aa isoforms: Oscillin-PA, Oscillin-PB, Oscillin-PC, Oscillin-PF, Oscillin-PH
272 aa isoforms: Oscillin-PD, Oscillin-PG
Additional Polypeptide Data and Comments
Reported size (kDa)
Comments
External Data
Subunit Structure (UniProtKB)
Homohexamer.
(UniProt, Q9VMP9)
Crossreferences
InterPro - A database of protein families, domains and functional sites
Linkouts
Sequences Consistent with the Gene Model
Nucleotide / Polypeptide Records
 
UniProt
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Oscillin using the Feature Mapper tool.

External Data
Crossreferences
Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
Linkouts
Gene Ontology (10 terms)
Molecular Function (2 terms)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
glucosamine-6-phosphate deaminase activity
inferred from sequence or structural similarity with UniProtKB:P46926
(assigned by UniProt )
(UniProt Curators, 2002-)
inferred from biological aspect of ancestor with PANTHER:PTN000138938
(assigned by GO_Central )
(Gaudet et al., 2011)
inferred from sequence or structural similarity with UniProtKB:P0A759
(Nakamura et al., 2000)
identical protein binding
inferred from biological aspect of ancestor with PANTHER:PTN000138938
(assigned by GO_Central )
(Gaudet et al., 2011)
Biological Process (7 terms)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (7 terms)
CV Term
Evidence
References
carbohydrate metabolic process
inferred from electronic annotation with InterPro:IPR006148
(assigned by InterPro )
(FlyBase Curators et al., 2004-)
generation of precursor metabolites and energy
inferred from sequence or structural similarity with UniProtKB:P46926
(assigned by UniProt )
(UniProt Curators, 2002-)
glucosamine catabolic process
inferred from sequence or structural similarity with UniProtKB:P46926
(assigned by UniProt )
(UniProt Curators, 2002-)
inferred from biological aspect of ancestor with PANTHER:PTN000138938
(assigned by GO_Central )
(Gaudet et al., 2011)
N-acetylglucosamine catabolic process
inferred from biological aspect of ancestor with PANTHER:PTN000138938
(assigned by GO_Central )
(Gaudet et al., 2011)
N-acetylglucosamine metabolic process
inferred from sequence or structural similarity with UniProtKB:P0A759
(Nakamura et al., 2000)
N-acetylneuraminate catabolic process
inferred from biological aspect of ancestor with PANTHER:PTN000138938
(assigned by GO_Central )
(Gaudet et al., 2011)
UDP-N-acetylglucosamine biosynthetic process
inferred from biological aspect of ancestor with PANTHER:PTN000138938
(assigned by GO_Central )
(Gaudet et al., 2011)
Cellular Component (1 term)
Terms Based on Experimental Evidence (0 terms)
Terms Based on Predictions or Assertions (1 term)
CV Term
Evidence
References
cytoplasm
inferred from biological aspect of ancestor with PANTHER:PTN000138938
(assigned by GO_Central )
(Gaudet et al., 2011)
inferred from sequence or structural similarity with UniProtKB:O88958
(assigned by UniProt )
(UniProt Curators, 2002-)
Expression Data
Expression Summary Ribbons
Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.
For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.
Transcript Expression
Polypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
adult stage
adult head
(Aradska et al., 2015)
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Evidence
References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\Oscillin in GBrowse 2
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Bulk Downloads
RNA-Seq RPKM values for all genes
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyExpress - Embryonic expression images (BDGP data)
  • Stages(s) 4-6
  • Stages(s) 7-8
  • Stages(s) 9-10
  • Stages(s) 11-12
  • Stages(s) 13-16
FlyBase Wiki
Image Based Resources
Alleles, Insertions, and Transgenic Constructs
Classical and Insertion Alleles ( 3 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of Oscillin
Transgenic constructs containing regulatory region of Oscillin
Deletions and Duplications ( 2 )
Phenotypes
For more details about a specific phenotype click on the relevant allele symbol.
Phenotype manifest in
Allele
Orthologs
Downloads
Download All DIOPT Orthologs
Download All OrthoDB Orthologs
Human Orthologs (via DIOPT v7.1)
Homo sapiens (Human) (3)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Hsap\GNPDA2
14 of 15
Yes
Yes
Hsap\GNPDA1
11 of 15
No
Yes
Hsap\MPPE1
1 of 15
No
No
Model Organism Orthologs (via DIOPT v7.1)
Mus musculus (laboratory mouse) (3)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Mmus\Gnpda1
11 of 15
Yes
Yes
Mmus\Gnpda2
11 of 15
Yes
Yes
Mmus\Mppe1
1 of 15
No
No
Rattus norvegicus (Norway rat) (3)
Rnor\Gnpda2
12 of 13
Yes
Yes
Rnor\Gnpda1
7 of 13
No
Yes
Rnor\Mppe1
1 of 13
No
No
Xenopus tropicalis (Western clawed frog) (2)
Xtro\gnpda1
11 of 12
Yes
Yes
Xtro\gnpda2
10 of 12
No
Yes
Danio rerio (Zebrafish) (2)
Drer\gnpda2
14 of 15
Yes
Yes
Drer\gnpda1
11 of 15
No
Yes
Caenorhabditis elegans (Nematode, roundworm) (3)
Cele\T03F6.3
14 of 15
Yes
Yes
Cele\B0511.13
1 of 15
No
No
Cele\T04A8.13
1 of 15
No
Yes
Arabidopsis thaliana (thale-cress) (1)
Atha\EMB2024
1 of 9
Yes
No
Saccharomyces cerevisiae (Brewer's yeast) (0)
No records found.
Schizosaccharomyces pombe (Fission yeast) (0)
No records found.
Orthologs in Drosophila Species (via OrthoDB v9.1) ( EOG09190CTV )
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly
Dmel\Oscillin
Drosophila suzukii
Spotted wing Drosophila
Dsuz\DS10_00001075
Drosophila simulans
Dsim\GD23349
Drosophila sechellia
Dsec\GM18555
Drosophila erecta
Dere\GG25080
Drosophila yakuba
Dyak\GE25482
Drosophila ananassae
Dana\GF15148
Drosophila pseudoobscura pseudoobscura
Dpse\GA19983
Drosophila persimilis
Dper\GL25853
Drosophila willistoni
Dwil\GK21107
Drosophila virilis
Dvir\GJ19587
Drosophila mojavensis
Dmoj\GI17992
Drosophila grimshawi
Dgri\GH10296
Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG091506I2 )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Musca domestica
House fly
Mdoa\17018303
Musca domestica
House fly
Mdoa\17025412
Glossina morsitans
Tsetse fly
Gmor\GMOY009440
Glossina morsitans
Tsetse fly
Gmor\GMOY002095
Glossina morsitans
Tsetse fly
Gmor\GMOY012058
Lucilia cuprina
Australian sheep blowfly
Lcup\FF38_06597
Lucilia cuprina
Australian sheep blowfly
Lcup\FF38_02885
Mayetiola destructor
Hessian fly
Mdes\Mdes016290
Mayetiola destructor
Hessian fly
Mdes\Mdes012970
Aedes aegypti
Yellow fever mosquito
Aaeg\Gnpda1
Aedes aegypti
Yellow fever mosquito
Aaeg\AAEL013879
Anopheles darlingi
American malaria mosquito
Adar\ADAC009134
Anopheles darlingi
American malaria mosquito
Adar\ADAC009132
Anopheles gambiae
Malaria mosquito
Agam\AGAP009304
Culex quinquefasciatus
Southern house mosquito
Cqui\CPIJ008075
Culex quinquefasciatus
Southern house mosquito
Cqui\CPIJ008074
Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W06YO )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Bombyx mori
Silkmoth
Bmor\BGIBMGA009467
Bombyx mori
Silkmoth
Bmor\BGIBMGA003701
Danaus plexippus
Monarch butterfly
Dple\DPOGS204639-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS203793-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS211163-PA
Heliconius melpomene
Postman butterfly
Hmel\HMEL012508
Heliconius melpomene
Postman butterfly
Hmel\HMEL017209
Heliconius melpomene
Postman butterfly
Hmel\HMEL012659
Apis florea
Little honeybee
Aflo\2750485972
Apis florea
Little honeybee
Aflo\5116006660
Apis mellifera
Western honey bee
Amel\LOC552716
Apis mellifera
Western honey bee
Amel\Oscillin
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP15123
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP22766
Bombus terrestris
Buff-tailed bumblebee
Bter\15208476
Bombus terrestris
Buff-tailed bumblebee
Bter\15212388
Linepithema humile
Argentine ant
Lhum\LH18020
Linepithema humile
Argentine ant
Lhum\LH22011
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:0022f5
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:0000b2
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG003310
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG012452
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_07222
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_03345
Dendroctonus ponderosae
Mountain pine beetle
Dpod\YQE_01204
Tribolium castaneum
Red flour beetle
Tcas\GLEAN_07627
Tribolium castaneum
Red flour beetle
Tcas\TC003757
Tribolium castaneum
Red flour beetle
Tcas\TC002924
Pediculus humanus
Human body louse
Phum\PHUM618470
Pediculus humanus
Human body louse
Phum\PHUM079800
Pediculus humanus
Human body louse
Phum\PHUM432570
Rhodnius prolixus
Kissing bug
Rpro\RPRC008766
Rhodnius prolixus
Kissing bug
Rpro\RPRC002765
Rhodnius prolixus
Kissing bug
Rpro\RPRC008764
Rhodnius prolixus
Kissing bug
Rpro\RPRC002701
Cimex lectularius
Bed bug
Clec\CLEC000985
Cimex lectularius
Bed bug
Clec\CLEC012520
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI33462
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI009259
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_02537
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_11013
Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X06U0 )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strigamia maritima
European centipede
Smar\SMAR001171
Strigamia maritima
European centipede
Smar\SMAR014850
Strigamia maritima
European centipede
Smar\SMAR002940
Ixodes scapularis
Black-legged tick
Isca\ISCW018498
Ixodes scapularis
Black-legged tick
Isca\ISCW016458
Stegodyphus mimosarum
African social velvet spider
Smim\KFM66495.1
Stegodyphus mimosarum
African social velvet spider
Smim\KFM76601.1
Tetranychus urticae
Two-spotted spider mite
Turt\tetur01g15940
Tetranychus urticae
Two-spotted spider mite
Turt\tetur36g00460
Tetranychus urticae
Two-spotted spider mite
Turt\tetur02g10820
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_60800
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_230426
Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G0LJF )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-gnpda1
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Mppe1
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-gnpda1_1
Ciona intestinalis
Vase tunicate
Cint\LOC100184260
Ciona intestinalis
Vase tunicate
Cint\LOC100179403
Ciona intestinalis
Vase tunicate
Cint\LOC101242593
Gallus gallus
Domestic chicken
Ggal\ENSGALG00000027244
Gallus gallus
Domestic chicken
Ggal\GNPDA2
Gallus gallus
Domestic chicken
Ggal\MPPE1
Gallus gallus
Domestic chicken
Ggal\GNPDA1
Paralogs
Downloads
Download All DIOPT Paralogs
Paralogs (via DIOPT v7.1)
Drosophila melanogaster (Fruit fly) (1)
Gene Symbol
Score
Source
Compara
eggNOG
Homologene
Inparanoid
Isobase
OrthoDB
OrthoFinder
orthoMCL
Panther
RoundUp
Alignment
PGAP5
1 of 10
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Model Summary Ribbon
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 0 )
    Human Ortholog
    Disease
    Evidence
    References
    Modifiers Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Interaction
    References
    Comments on Models/Modifiers Based on Experimental Evidence ( 0 )
     
    Disease Associations of Human Orthologs (via DIOPT v7.1 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    GNPDA2; glucosamine-6-phosphate deaminase 2
    14 of 15
    613222
        GNPDA1; glucosamine-6-phosphate deaminase 1
        11 of 15
        601798
            Functional Complementation Data
            Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
            Interactions
            Summary of Physical Interactions
            Summary of Genetic Interactions
            esyN Network Diagram
            Starting gene(s)
            Interaction type
            Interacting gene(s)
            Reference
            Starting gene(s)
            Interaction type
            Interacting gene(s)
            Reference
            External Data
            Subunit Structure (UniProtKB)
            Homohexamer.
            (UniProt, Q9VMP9 )
            Linkouts
            DroID - A comprehensive database of gene and protein interactions.
            InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.
            MIST (protein-protein) - An integrated Molecular Interaction Database
            Pathways
            Gene Group - Pathway Membership (FlyBase)
            External Data
            Linkouts
            FlyCyc Pathways - Pathways from a BioCyc PGDB for Dmel
            KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.
            Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.
            Genomic Location and Detailed Mapping Data
            Chromosome (arm)
            2L
            Recombination map
            2-17
            Cytogenetic map
            25E6-25E6
            Sequence location
            2L:5,547,086..5,549,614 [+]
            FlyBase Computed Cytological Location
            Cytogenetic map
            Evidence for location
            25E6-25E6
            Limits computationally determined from genome sequence between P{lacW}Hel25Ek11511 and P{lacW}l(2)k06502k06502
            Experimentally Determined Cytological Location
            Cytogenetic map
            Notes
            References
            Experimentally Determined Recombination Data
            Location
            2-17
            (FlyBase, 2016)
            2-18.5
            (Comeron et al., 2012)
            Left of (cM)
            Right of (cM)
            Notes
            Stocks and Reagents
            Stocks (5)
            Genomic Clones (9)
             

            Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

            cDNA Clones (183)
             

            Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

            cDNA clones, fully sequences
            BDGP DGC clones
            Other clones
            Drosophila Genomics Resource Center cDNA clones

            For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

            cDNA Clones, End Sequenced (ESTs)
            BDGP DGC clones
            Other clones
            RNAi and Array Information
            Linkouts
            DRSC - Results frm RNAi screens
            GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
            Antibody Information
            Laboratory Generated Antibodies
             
            Commercially Available Antibodies
             
            Other Information
            Relationship to Other Genes
            Source for database identify of
            Source for identity of: Oscillin CG6957
            (Nakamura et al., 2000)
            Source for database merge of
            Additional comments
            Other Comments
            Origin and Etymology
            Discoverer
            Etymology
            Identification
            External Crossreferences and Linkouts ( 71 )
            Sequence Crossreferences
            NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
            GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
            GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
            RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
            UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information
            UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information
            Other crossreferences
            BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
            Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
            Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.
            FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
            Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
            Flygut - An atlas of the Drosophila adult midgut
            GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
            iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)
            InterPro - A database of protein families, domains and functional sites
            KEGG Genes - Molecular building blocks of life in the genomic space.
            KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.
            modMine - A data warehouse for the modENCODE project
            Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.
            Linkouts
            DPiM - Drosophila Protein interaction map
            DroID - A comprehensive database of gene and protein interactions.
            DRSC - Results frm RNAi screens
            FLIGHT - Cell culture data for RNAi and other high-throughput technologies
            FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
            FlyCyc Pathways - Pathways from a BioCyc PGDB for Dmel
            FlyMine - An integrated database for Drosophila genomics
            InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.
            KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.
            MIST (protein-protein) - An integrated Molecular Interaction Database
            Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.
            Synonyms and Secondary IDs (3)
            Datasets (0)
            Study focus (0)
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            References (31)