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Gene Dmel\CG9044

General Information
Symbol	Dmel\CG9044	Species	D. melanogaster
Name		Annotation symbol	CG9044
Feature type	protein_coding_gene	FlyBase ID	FBgn0031752
Gene Model Status	Current	Stock availability	3 publicly available
Also Known As	CT25972
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	26A3-26A3	Sequence location	2L:5,949,484..5,955,238 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG9044 (FBgn0031752). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Leucine-rich repeat. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed during late larval stages, during early pupal stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: virgin spermatheca. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, adult female reproductive system, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1628438_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG9044. Gene sequence location is 2L:5949484..5955238.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN20568 HFA03130
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 26A3-26A3   Limits computationally determined from genome sequence between P{EP}bchsEP2299&P{EP}GpdhEP466 and P{lacW}chick13321
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG9044 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Review with DGC1 data.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG9044-RB FBtr0273412  NM_135127   4325   1295
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG9044-PB   FBpp0271920   145.3   1295   5.00     NP_608971   AAF52305
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Leucine-rich repeat (IPR001611)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA540360   AA820839   AE014134 AAF52305   AI238041   AI520225   AI543481   AW942547   AY121623   BI162591   BI162592   BI613358   BI635231   BT010054 AAQ22523   CO190642   CO264326   CO310748   CO315958   DN154235   EC075242   EC077397   EC079092   EC089024   EC202112   EC206963   EC221254   EC223693   EC226819   ES694466   ES694776   ES694813   EV597005   GH943993   GH951016   GH953895   GH954135   GH961302   GH963675   GH965743   GH967492   GH968243   GH968791   GH970907   GH974574   GH978309   GH979628   GH980100   GH980821   GH981047   GH983383   GH984421
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VMK9
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0031752    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0031752 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed during late larval stages, during early pupal stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0031752 expression level Developmental Stage   Expression Level embryo 00-02hr    1044 embryo 02-04hr    537 embryo 04-06hr    984 embryo 06-08hr    971 embryo 08-10hr    882 embryo 10-12hr    700 embryo 12-14hr    847 embryo 14-16hr    643 embryo 16-18hr    865 embryo 18-20hr    987 embryo 20-22hr    821 embryo 22-24hr    1061 larva L1    510 larva L2    513 larva L3 12hr old    621 larva L3 puffstage 1-2    991 larva L3 puffstage 3-6    1650 larva L3 puffstage 7-9    2224 white prepupae new    2328 white prepupae 12hr    2024 white prepupae 24hr    1198 pupae 2d postWPP    1003 pupae 3d postWPP    765 pupae 4d postWPP    887 adult male 01day    1274 adult male 05day    1268 adult male 30day    1057 adult female 01day    871 adult female 05day    1160 adult female 30day    1153 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1044) embryo 02-04hr  (537) embryo 04-06hr  (984) embryo 06-08hr  (971) embryo 08-10hr  (882) embryo 10-12hr  (700) embryo 12-14hr  (847) embryo 14-16hr  (643) embryo 16-18hr  (865) embryo 18-20hr  (987) embryo 20-22hr  (821) embryo 22-24hr  (1061) larva L1  (510) larva L2  (513) larva L3 12hr old  (621) larva L3 puffstage 1-2  (991) larva L3 puffstage 3-6  (1650) larva L3 puffstage 7-9  (2224) white prepupae new  (2328) white prepupae 12hr  (2024) white prepupae 24hr  (1198) pupae 2d postWPP  (1003) pupae 3d postWPP  (765) pupae 4d postWPP  (887) adult male 01day  (1274) adult male 05day  (1268) adult male 30day  (1057) adult female 01day  (871) adult female 05day  (1160) adult female 30day  (1153) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1044 embryo 02-04hr    537 embryo 04-06hr    984 embryo 06-08hr    971 embryo 08-10hr    882 embryo 10-12hr    700 embryo 12-14hr    847 embryo 14-16hr    643 embryo 16-18hr    865 embryo 18-20hr    987 embryo 20-22hr    821 embryo 22-24hr    1061 larva L1    510 larva L2    513 larva L3 12hr old    621 larva L3 puffstage 1-2    991 larva L3 puffstage 3-6  (1650) larva L3 puffstage 7-9  (2224) white prepupae new  (2328) white prepupae 12hr  (2024) white prepupae 24hr    1198 pupae 2d postWPP    1003 pupae 3d postWPP    765 pupae 4d postWPP    887 adult male 01day    1274 adult male 05day    1268 adult male 30day    1057 adult female 01day    871 adult female 05day    1160 adult female 30day    1153 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1044 embryo 02-04hr    537 embryo 04-06hr    984 embryo 06-08hr    971 embryo 08-10hr    882 embryo 10-12hr    700 embryo 12-14hr    847 embryo 14-16hr    643 embryo 16-18hr    865 embryo 18-20hr    987 embryo 20-22hr    821 embryo 22-24hr    1061 larva L1    510 larva L2    513 larva L3 12hr old    621 larva L3 puffstage 1-2    991 larva L3 puffstage 3-6    1650 larva L3 puffstage 7-9    2224 white prepupae new    2328 white prepupae 12hr    2024 white prepupae 24hr    1198 pupae 2d postWPP    1003 pupae 3d postWPP    765 pupae 4d postWPP    887 adult male 01day    1274 adult male 05day    1268 adult male 30day    1057 adult female 01day    871 adult female 05day    1160 adult female 30day    1153 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1044 embryo 02-04hr    537 embryo 04-06hr    984 embryo 06-08hr    971 embryo 08-10hr    882 embryo 10-12hr    700 embryo 12-14hr    847 embryo 14-16hr    643 embryo 16-18hr    865 embryo 18-20hr    987 embryo 20-22hr    821 embryo 22-24hr    1061 larva L1    510 larva L2    513 larva L3 12hr old    621 larva L3 puffstage 1-2    991 larva L3 puffstage 3-6    1650 larva L3 puffstage 7-9    2224 white prepupae new    2328 white prepupae 12hr    2024 white prepupae 24hr    1198 pupae 2d postWPP    1003 pupae 3d postWPP    765 pupae 4d postWPP    887 adult male 01day    1274 adult male 05day    1268 adult male 30day    1057 adult female 01day    871 adult female 05day    1160 adult female 30day    1153 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0031752 expression level Developmental Stage   Expression Level embryo 00-02hr    1044 embryo 02-04hr    537 embryo 04-06hr    984 embryo 06-08hr    971 embryo 08-10hr    882 embryo 10-12hr    700 embryo 12-14hr    847 embryo 14-16hr    643 embryo 16-18hr    865 embryo 18-20hr    987 embryo 20-22hr    821 embryo 22-24hr    1061 larva L1    510 larva L2    513 larva L3 12hr old    621 larva L3 puffstage 1-2    991 larva L3 puffstage 3-6    1650 larva L3 puffstage 7-9    2224 white prepupae new    2328 white prepupae 12hr    2024 white prepupae 24hr    1198 pupae 2d postWPP    1003 pupae 3d postWPP    765 pupae 4d postWPP    887 adult male 01day    1274 adult male 05day    1268 adult male 30day    1057 adult female 01day    871 adult female 05day    1160 adult female 30day    1153 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (1044) embryo 02-04hr  (537) embryo 04-06hr  (984) embryo 06-08hr  (971) embryo 08-10hr  (882) embryo 10-12hr  (700) embryo 12-14hr  (847) embryo 14-16hr  (643) embryo 16-18hr  (865) embryo 18-20hr  (987) embryo 20-22hr  (821) embryo 22-24hr  (1061) larva L1  (510) larva L2  (513) larva L3 12hr old  (621) larva L3 puffstage 1-2  (991) larva L3 puffstage 3-6  (1650) larva L3 puffstage 7-9  (2224) white prepupae new  (2328) white prepupae 12hr  (2024) white prepupae 24hr  (1198) pupae 2d postWPP  (1003) pupae 3d postWPP  (765) pupae 4d postWPP  (887) adult male 01day  (1274) adult male 05day  (1268) adult male 30day  (1057) adult female 01day  (871) adult female 05day  (1160) adult female 30day  (1153) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    1044 embryo 02-04hr    537 embryo 04-06hr    984 embryo 06-08hr    971 embryo 08-10hr    882 embryo 10-12hr    700 embryo 12-14hr    847 embryo 14-16hr    643 embryo 16-18hr    865 embryo 18-20hr    987 embryo 20-22hr    821 embryo 22-24hr    1061 larva L1    510 larva L2    513 larva L3 12hr old    621 larva L3 puffstage 1-2    991 larva L3 puffstage 3-6  1650 larva L3 puffstage 7-9  2224 white prepupae new  2328 white prepupae 12hr  2024 white prepupae 24hr    1198 pupae 2d postWPP    1003 pupae 3d postWPP    765 pupae 4d postWPP    887 adult male 01day    1274 adult male 05day    1268 adult male 30day    1057 adult female 01day    871 adult female 05day    1160 adult female 30day    1153 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    1044 embryo 02-04hr    537 embryo 04-06hr    984 embryo 06-08hr    971 embryo 08-10hr    882 embryo 10-12hr    700 embryo 12-14hr    847 embryo 14-16hr    643 embryo 16-18hr    865 embryo 18-20hr    987 embryo 20-22hr    821 embryo 22-24hr    1061 larva L1    510 larva L2    513 larva L3 12hr old    621 larva L3 puffstage 1-2    991 larva L3 puffstage 3-6    1650 larva L3 puffstage 7-9    2224 white prepupae new    2328 white prepupae 12hr    2024 white prepupae 24hr    1198 pupae 2d postWPP    1003 pupae 3d postWPP    765 pupae 4d postWPP    887 adult male 01day    1274 adult male 05day    1268 adult male 30day    1057 adult female 01day    871 adult female 05day    1160 adult female 30day    1153 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    1044 embryo 02-04hr    537 embryo 04-06hr    984 embryo 06-08hr    971 embryo 08-10hr    882 embryo 10-12hr    700 embryo 12-14hr    847 embryo 14-16hr    643 embryo 16-18hr    865 embryo 18-20hr    987 embryo 20-22hr    821 embryo 22-24hr    1061 larva L1    510 larva L2    513 larva L3 12hr old    621 larva L3 puffstage 1-2    991 larva L3 puffstage 3-6    1650 larva L3 puffstage 7-9    2224 white prepupae new    2328 white prepupae 12hr    2024 white prepupae 24hr    1198 pupae 2d postWPP    1003 pupae 3d postWPP    765 pupae 4d postWPP    887 adult male 01day    1274 adult male 05day    1268 adult male 30day    1057 adult female 01day    871 adult female 05day    1160 adult female 30day    1153 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0031752    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0031752 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult tissues/organs expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: virgin spermatheca. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, adult female reproductive system, adult male accessory gland, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0031752 expression level Tissue   Expression Level Larval Central Nervous System    82.95 Larval Midgut    115 Larval Hindgut    272.4 Larval Malpighian Tubules    221.6 Larval Fat Body    176 Larval Salivary Gland    148.9 Larval Trachea    86 Larval Carcass    148.5 Adult Head    154.6 Adult Eye    124.8 Adult Brain    178.4 Adult Thoracic-Abdominal Ganglion    155.9 Adult Crop    158.5 Adult Midgut    111 Adult Hindgut    155.6 Adult Malpighian Tubules    96.6 Adult Fat Body    426.9 Adult Salivary Gland    272.3 Adult Heart    172.275 Adult VirginFemale Spermatheca    524.7 Adult InseminatedFemale Spermatheca    471.8 Adult Ovary    126 Adult Testis    52.5 Adult Male Accessory Gland    159.7 Adult Carcass    263.1 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    82.95 Larval Midgut    115 Larval Hindgut    272.4 Larval Malpighian Tubules    221.6 Larval Fat Body    176 Larval Salivary Gland    148.9 Larval Trachea    86 Larval Carcass    148.5 Adult Head    154.6 Adult Eye    124.8 Adult Brain    178.4 Adult Thoracic-Abdominal Ganglion    155.9 Adult Crop    158.5 Adult Midgut    111 Adult Hindgut    155.6 Adult Malpighian Tubules    96.6 Adult Fat Body    426.9 Adult Salivary Gland    272.3 Adult Heart    172.275 Adult VirginFemale Spermatheca  524.7 Adult InseminatedFemale Spermatheca    471.8 Adult Ovary    126 Adult Testis    52.5 Adult Male Accessory Gland    159.7 Adult Carcass    263.1 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    82.95 Larval Midgut    115 Larval Hindgut    272.4 Larval Malpighian Tubules    221.6 Larval Fat Body    176 Larval Salivary Gland    148.9 Larval Trachea    86 Larval Carcass    148.5 Adult Head    154.6 Adult Eye    124.8 Adult Brain    178.4 Adult Thoracic-Abdominal Ganglion    155.9 Adult Crop    158.5 Adult Midgut    111 Adult Hindgut    155.6 Adult Malpighian Tubules    96.6 Adult Fat Body    426.9 Adult Salivary Gland    272.3 Adult Heart    172.275 Adult VirginFemale Spermatheca    524.7 Adult InseminatedFemale Spermatheca    471.8 Adult Ovary    126 Adult Testis    52.5 Adult Male Accessory Gland    159.7 Adult Carcass    263.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    82.95 Larval Midgut    115 Larval Hindgut    272.4 Larval Malpighian Tubules    221.6 Larval Fat Body    176 Larval Salivary Gland    148.9 Larval Trachea    86 Larval Carcass    148.5 Adult Head    154.6 Adult Eye    124.8 Adult Brain    178.4 Adult Thoracic-Abdominal Ganglion    155.9 Adult Crop    158.5 Adult Midgut    111 Adult Hindgut    155.6 Adult Malpighian Tubules    96.6 Adult Fat Body    426.9 Adult Salivary Gland    272.3 Adult Heart    172.275 Adult VirginFemale Spermatheca    524.7 Adult InseminatedFemale Spermatheca    471.8 Adult Ovary    126 Adult Testis    52.5 Adult Male Accessory Gland    159.7 Adult Carcass    263.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0031752 expression level Tissue   Expression Level Larval Central Nervous System    82.95 Larval Midgut    115 Larval Hindgut    272.4 Larval Malpighian Tubules    221.6 Larval Fat Body    176 Larval Salivary Gland    148.9 Larval Trachea    86 Larval Carcass    148.5 Adult Head    154.6 Adult Eye    124.8 Adult Brain    178.4 Adult Thoracic-Abdominal Ganglion    155.9 Adult Crop    158.5 Adult Midgut    111 Adult Hindgut    155.6 Adult Malpighian Tubules    96.6 Adult Fat Body    426.9 Adult Salivary Gland    272.3 Adult Heart    172.275 Adult VirginFemale Spermatheca    524.7 Adult InseminatedFemale Spermatheca    471.8 Adult Ovary    126 Adult Testis    52.5 Adult Male Accessory Gland    159.7 Adult Carcass    263.1 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    82.95 Larval Midgut    115 Larval Hindgut    272.4 Larval Malpighian Tubules    221.6 Larval Fat Body    176 Larval Salivary Gland    148.9 Larval Trachea    86 Larval Carcass    148.5 Adult Head    154.6 Adult Eye    124.8 Adult Brain    178.4 Adult Thoracic-Abdominal Ganglion    155.9 Adult Crop    158.5 Adult Midgut    111 Adult Hindgut    155.6 Adult Malpighian Tubules    96.6 Adult Fat Body    426.9 Adult Salivary Gland    272.3 Adult Heart    172.275 Adult VirginFemale Spermatheca  524.7 Adult InseminatedFemale Spermatheca    471.8 Adult Ovary    126 Adult Testis    52.5 Adult Male Accessory Gland    159.7 Adult Carcass    263.1 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    82.95 Larval Midgut    115 Larval Hindgut    272.4 Larval Malpighian Tubules    221.6 Larval Fat Body    176 Larval Salivary Gland    148.9 Larval Trachea    86 Larval Carcass    148.5 Adult Head    154.6 Adult Eye    124.8 Adult Brain    178.4 Adult Thoracic-Abdominal Ganglion    155.9 Adult Crop    158.5 Adult Midgut    111 Adult Hindgut    155.6 Adult Malpighian Tubules    96.6 Adult Fat Body    426.9 Adult Salivary Gland    272.3 Adult Heart    172.275 Adult VirginFemale Spermatheca    524.7 Adult InseminatedFemale Spermatheca    471.8 Adult Ovary    126 Adult Testis    52.5 Adult Male Accessory Gland    159.7 Adult Carcass    263.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    82.95 Larval Midgut    115 Larval Hindgut    272.4 Larval Malpighian Tubules    221.6 Larval Fat Body    176 Larval Salivary Gland    148.9 Larval Trachea    86 Larval Carcass    148.5 Adult Head    154.6 Adult Eye    124.8 Adult Brain    178.4 Adult Thoracic-Abdominal Ganglion    155.9 Adult Crop    158.5 Adult Midgut    111 Adult Hindgut    155.6 Adult Malpighian Tubules    96.6 Adult Fat Body    426.9 Adult Salivary Gland    272.3 Adult Heart    172.275 Adult VirginFemale Spermatheca    524.7 Adult InseminatedFemale Spermatheca    471.8 Adult Ovary    126 Adult Testis    52.5 Adult Male Accessory Gland    159.7 Adult Carcass    263.1 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    154.6   NA  Eye    124.8   NA  Brain    178.4   82.95  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    155.9   NA  Crop    158.5   115  Midgut    111   272.4  Hindgut    155.6   221.6  Malpighian Tubules    96.6   176  Fat Body    426.9   148.9  Salivary Gland    272.3   NA  Heart    172.275   86  Trachea    NA   NA  VirginFemale Spermatheca    524.7   NA  InseminatedFemale Spermatheca    471.8   NA  Ovary    126   NA  Testis    52.5   NA  Male Accessory Gland    159.7   148.5  Carcass    263.1 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_23
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031752 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9044-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG9044GD14103 Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG9044 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG9044 Class Mutagen Stocks Known lesion CG9044GD14103 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG9044KK100472 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel7024 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD14103} NA P{KK100472} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG9044 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0031752 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33825
Orthologs
Genome-wide drosophilid orthologs	Dana\GF15590 Dere\GG25106 Dgri\GH11013 Dmoj\GI17533 Dper\GL19045 Dpse\GA21499 Dsec\GM18583 Dsim\GD23371 Dvir\GJ15424 Dwil\GK14707 Dyak\GE25745
Curated drosophilid orthologs	Dpse\GA21499
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL012547-PA Aedes aegypti (mosquito) AGAP010218-PA Anopheles gambiae (mosquito) XP_623817.2 Apis mellifera (honey bee) XP_001942627.1 Acyrthosiphon pisum (pea aphid) At1g48540.1 Arabidopsis thaliana (wall cress) 123981 Branchiostoma floridae (lancelet) ENSBTAP00000049746 Bos taurus (bovine) ENSCAFP00000013833 Canis familiaris (dog) CPIJ009050 Culex pipens (mosquito) ENSCPOP00000016243 Cavia porcellus (guinea pig) 224784 Daphnia pulex (daphnia) ENSECAP00000015084 Equus caballus (horse) ENSGACP00000018865 Gymnopilus aculeatus (mushroom) ENSGALP00000018299 Gallus gallus (chicken) ENSP00000295641 Homo sapiens (human) ENSMODP00000018833 Monodelphis domestica (gray opossum) ENSMMUP00000003388 Macaca mulatta (rhesus monkey) ENSMUSP00000109182 Mus musculus (house mouse) XP_001600307.1 Nasonia vitripennis (wasp) ENSORLP00000002765 Oryzias latipes (japanese killifish) PHUM009384-PA Pediculus humanus (human body louse) ENSPPYP00000014766 Pongo pygmaeus (orangutan) ENSPTRP00000022150 Pan troglodytes (chimpanzee) ENSRNOP00000027256 Rattus norvegicus (norway rat) XP_001190047.1 Strongylocentrotus purpuratus (purple sea urchin) XP_971198.2 Tribolium castaneum (red flour beetle) ENSTRUP00000034627 Takifugu rubripes (pufferfish Takifugu) 3687.m00061 Tetrahymena thermophila (ciliate protozoa) ENSXETP00000015544 Xenopus tropicalis (frog) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13912 NV17238 LH10019 ISCW015413 FBgn0242802 FBgn0216712 FBgn0202617 FBgn0194756 FBgn0173489 JGI_V11_224784 FBgn0081485 FBgn0156645 FBgn0140277 FBgn0118494 FBgn0117234 FBgn0092614 CPIJ009050 ACYPI000748 GB11519 AGAP010218 AAEL012547 PHUM413350 GLEAN_11344
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
VDRC	v106805 P{KK100472}VIE-260B v42193 w1118; P{GD14103}v42193 v42192 w1118; P{GD14103}v42192/TM3
Genomic Clones ( 1 )
	BACR48E14 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 34 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH17619 LD19823
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH14025 LD24747 LD40315 RH42501 SD10250 SD16518
Other clones	Dmel_neb_015660_0831_1546 EK048919 EK138511 EK203230 EK222427 EK263218 RE01868 RP004119309 RP004122406 RP004162570 RP004198078 RP004210816 RP004235424 RP004237365 RP004243847 RP004245199 RP004248046 RP004261135 RP004360508 RP004420340 RP004450185 RP004457708 RP004467032 RP004488195 RP004512025 RP004536122
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0031752 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33825
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_135127 RefSeq (Proteins) • NP_608971 DDBJ / EMBL / GenBank • AA540360 AAF52305 AAQ22523 AW942547 BT010054 Entrez Gene - A searchable database of RefSeq genes. • 33825 UniProtKB/TrEMBL • Q9VMK9
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Leucine-rich repeat (IPR001611)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0031752 DRSC - Results from RNAi screens. • FBgn0031752 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031752 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9044-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0031752 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33825 InParanoid A subset of ortholog calls from InParanoid. • AAEL012547-PA Aedes aegypti (mosquito) AGAP010218-PA Anopheles gambiae (mosquito) XP_623817.2 Apis mellifera (honey bee) XP_001942627.1 Acyrthosiphon pisum (pea aphid) At1g48540.1 Arabidopsis thaliana (wall cress) 123981 Branchiostoma floridae (lancelet) ENSBTAP00000049746 Bos taurus (bovine) ENSCAFP00000013833 Canis familiaris (dog) CPIJ009050 Culex pipens (mosquito) ENSCPOP00000016243 Cavia porcellus (guinea pig) 224784 Daphnia pulex (daphnia) ENSECAP00000015084 Equus caballus (horse) ENSGACP00000018865 Gymnopilus aculeatus (mushroom) ENSGALP00000018299 Gallus gallus (chicken) ENSP00000295641 Homo sapiens (human) ENSMODP00000018833 Monodelphis domestica (gray opossum) ENSMMUP00000003388 Macaca mulatta (rhesus monkey) ENSMUSP00000109182 Mus musculus (house mouse) XP_001600307.1 Nasonia vitripennis (wasp) ENSORLP00000002765 Oryzias latipes (japanese killifish) PHUM009384-PA Pediculus humanus (human body louse) ENSPPYP00000014766 Pongo pygmaeus (orangutan) ENSPTRP00000022150 Pan troglodytes (chimpanzee) ENSRNOP00000027256 Rattus norvegicus (norway rat) XP_001190047.1 Strongylocentrotus purpuratus (purple sea urchin) XP_971198.2 Tribolium castaneum (red flour beetle) ENSTRUP00000034627 Takifugu rubripes (pufferfish Takifugu) 3687.m00061 Tetrahymena thermophila (ciliate protozoa) ENSXETP00000015544 Xenopus tropicalis (frog) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33825 modMine - Data generated by the modENCODE project. • FBgn0031752 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • PB13912 NV17238 LH10019 ISCW015413 FBgn0242802 FBgn0216712 FBgn0202617 FBgn0194756 FBgn0173489 JGI_V11_224784 FBgn0081485 FBgn0156645 FBgn0140277 FBgn0118494 FBgn0117234 FBgn0092614 CPIJ009050 ACYPI000748 GB11519 AGAP010218 AAEL012547 PHUM413350 GLEAN_11344
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	CG9044 (Keleman et al., 2009.8.5, Kim and Marqués, 2010) CT25972 (Ceriani et al., 2002, Hynes and Zhao, 2000)
Name Synonym
Secondary FlyBase IDs
References ( 12 )
Research paper	Kim and Marqués, 2010, Dev. Dyn. 239(9): 2413--2425 Identification of downstream targets of the Bone Morphogenetic Protein pathway in the Drosophila nervous system. [FBrf0211763] Weber, 2005, Genetics 169(3): 1461--1475 Many P-element insertions affect wing shape in Drosophila melanogaster. [FBrf0188495] Ceriani et al., 2002, J. Neurosci. 22(21): 9305--9319 Genome-wide expression analysis in Drosophila reveals genes controlling circadian behavior. [FBrf0152147]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Hynes and Zhao, 2000, J. Cell Biol. 150(2): Table S7. LRR repeat-containing proteins. [FBrf0132111]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]