A Database of Drosophila Genes & Genomes

FB2012_01, released January 20th, 2012
 

Gene Dmel\CG11050

General Information
SymbolDmel\CG11050SpeciesD. melanogaster
NameAnnotation symbolCG11050
Feature typeprotein_coding_geneFlyBase IDFBgn0031836
Gene Model StatusCurrent Stock availability 8 publicly available
Genomic Location
Chromosome (arm)2LRecombination map
Cytogenetic map26F1-26F1Sequence location2L:6,611,023..6,617,117 [+]

Genomic Maps

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modENCODE GBrowse
detailed view
hide Summary Information
Automatically generated summary

See sections below for more information
This gene is referred to in FlyBase by the symbol Dmel\CG11050 (FBgn0031836). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: metal ion binding; phosphoric diester hydrolase activity. The biological processes in which it is involved are not known. 8 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. Protein features are: HD domain; Metal-dependent phosphohydrolase, HD domain; Metal-dependent phosphohydrolase, HD subdomain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during late pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, adult salivary gland, adult female reproductive system, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval hindgut, larval fat body, larval salivary gland, larval trachea, adult male accessory gland, larval carcass. Comments on Affy2 ProbeSet: ProbeSet 1641169_s_at completely aligns to an exonic region common to each of the 3 FlyBase-annotated transcript isoforms of CG11050. Gene sequence location is 2L:6611023..6617117.

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Description
What does this section display?
This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).
What does this section not display?
This section does not currently display links that were removed or gene model changes.
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FB2011_10
FB2012_01
Sequence features
All updates Click here to see a list of all updates to this record from FB2010_08 and on.
hide Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
26F1-26F1  
Limits computationally determined from genome sequence between P{EP}Sec61αEP2180 and P{lacW}Ate1k10809  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
hide Gene Model & Products
Please see the GBrowse view of Dmel\CG11050 for information on other features
To submit a correction to a gene model please use the Contact FlyBase form
detailed view FBtr0079291 FBtr0079292 FBtr0079293 FBtr0113026 FBpp0078923 FBpp0078922 FBpp0078921 FBpp0111939 FBti0025858 FBti0034598 FBti0103415 FBti0124608 FBti0054751 FBti0051762 FBti0047546 FBti0024078 FBti0058900 FBti0075494
Comments on Gene Model
DGC clone LD22339 appears problematic: incomplete CDS
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0079291
  2098
  388
FBtr0079292
  2056
  388
FBtr0079293
  1910
  388
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
hide Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0078921  
42.5  
388  
6.69  
FBpp0078922  
42.5  
388  
6.69  
FBpp0078923  
42.5  
388  
6.69  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
hide Mapped Features
Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
hide External Data
Linkouts
Crossreferences
hide Expression Data
hideTranscript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hidePolypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
hide High-Throughput Expression Data
or
Untitled Document detailed view CG11050-RA CG11050-RB CG11050-RC CG11320-RB
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

modENCODE Temporal Expression Data for FBgn0031836


   Styles
Linear
Logarithmic
Heatmap
   Scales
max expr for FBgn0031836
Very low expression bin max
Moderate expression bin max
High expression bin max
Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during late pupal stages, in adult female stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No expression (0 - 0)
 
Extremely low expression (1 - 10)
 
Very low expression (11 - 100)
 
Low expression (101 - 400)
 
Moderate expression (401 - 1400)
 
Moderately high expression (1401 - 4000)
 
High expression (4001 - 10000)
 
Very high expression (10001 - 100000)
 
Extremely high expression (100001 - 2000000)

Linear, scaled to maximum FBgn0031836 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 5769
embryo 02-04hr
 
 9324
embryo 04-06hr
 
 8544
embryo 06-08hr
 
 6832
embryo 08-10hr
 
 4720
embryo 10-12hr
 
 3509
embryo 12-14hr
 
 2695
embryo 14-16hr
 
 2400
embryo 16-18hr
 
 2216
embryo 18-20hr
 
 2688
embryo 20-22hr
 
 2894
embryo 22-24hr
 
 3061
larva L1
 
 2147
larva L2
 
 1807
larva L3 12hr old
 
 1765
larva L3 puffstage 1-2
 
 2195
larva L3 puffstage 3-6
 
 1171
larva L3 puffstage 7-9
 
 761
white prepupae new
 
 772
white prepupae 12hr
 
 1238
white prepupae 24hr
 
 774
pupae 2d postWPP
 
 899
pupae 3d postWPP
 
 1355
pupae 4d postWPP
 
 6080
adult male 01day
 
 3886
adult male 05day
 
 3052
adult male 30day
 
 3288
adult female 01day
 
 5153
adult female 05day
 
 4252
adult female 30day
 
 4676
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5769)
embryo 02-04hr
 (9324)
embryo 04-06hr
 (8544)
embryo 06-08hr
 (6832)
embryo 08-10hr
 (4720)
embryo 10-12hr
 (3509)
embryo 12-14hr
 (2695)
embryo 14-16hr
 (2400)
embryo 16-18hr
 (2216)
embryo 18-20hr
 (2688)
embryo 20-22hr
 (2894)
embryo 22-24hr
 (3061)
larva L1
 (2147)
larva L2
 (1807)
larva L3 12hr old
 (1765)
larva L3 puffstage 1-2
 (2195)
larva L3 puffstage 3-6
 (1171)
larva L3 puffstage 7-9
 (761)
white prepupae new
 (772)
white prepupae 12hr
 (1238)
white prepupae 24hr
 (774)
pupae 2d postWPP
 (899)
pupae 3d postWPP
 (1355)
pupae 4d postWPP
 (6080)
adult male 01day
 (3886)
adult male 05day
 (3052)
adult male 30day
 (3288)
adult female 01day
 (5153)
adult female 05day
 (4252)
adult female 30day
 (4676)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5769)
embryo 02-04hr
 (9324)
embryo 04-06hr
 (8544)
embryo 06-08hr
 (6832)
embryo 08-10hr
 (4720)
embryo 10-12hr
 (3509)
embryo 12-14hr
 (2695)
embryo 14-16hr
 (2400)
embryo 16-18hr
 (2216)
embryo 18-20hr
 (2688)
embryo 20-22hr
 (2894)
embryo 22-24hr
 (3061)
larva L1
 (2147)
larva L2
 (1807)
larva L3 12hr old
 (1765)
larva L3 puffstage 1-2
 (2195)
larva L3 puffstage 3-6
 
 1171
larva L3 puffstage 7-9
 
 761
white prepupae new
 
 772
white prepupae 12hr
 
 1238
white prepupae 24hr
 
 774
pupae 2d postWPP
 
 899
pupae 3d postWPP
 
 1355
pupae 4d postWPP
 (6080)
adult male 01day
 (3886)
adult male 05day
 (3052)
adult male 30day
 (3288)
adult female 01day
 (5153)
adult female 05day
 (4252)
adult female 30day
 (4676)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5769
embryo 02-04hr
 
 9324
embryo 04-06hr
 
 8544
embryo 06-08hr
 
 6832
embryo 08-10hr
 
 4720
embryo 10-12hr
 
 3509
embryo 12-14hr
 
 2695
embryo 14-16hr
 
 2400
embryo 16-18hr
 
 2216
embryo 18-20hr
 
 2688
embryo 20-22hr
 
 2894
embryo 22-24hr
 
 3061
larva L1
 
 2147
larva L2
 
 1807
larva L3 12hr old
 
 1765
larva L3 puffstage 1-2
 
 2195
larva L3 puffstage 3-6
 
 1171
larva L3 puffstage 7-9
 
 761
white prepupae new
 
 772
white prepupae 12hr
 
 1238
white prepupae 24hr
 
 774
pupae 2d postWPP
 
 899
pupae 3d postWPP
 
 1355
pupae 4d postWPP
 
 6080
adult male 01day
 
 3886
adult male 05day
 
 3052
adult male 30day
 
 3288
adult female 01day
 
 5153
adult female 05day
 
 4252
adult female 30day
 
 4676
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5769
embryo 02-04hr
 
 9324
embryo 04-06hr
 
 8544
embryo 06-08hr
 
 6832
embryo 08-10hr
 
 4720
embryo 10-12hr
 
 3509
embryo 12-14hr
 
 2695
embryo 14-16hr
 
 2400
embryo 16-18hr
 
 2216
embryo 18-20hr
 
 2688
embryo 20-22hr
 
 2894
embryo 22-24hr
 
 3061
larva L1
 
 2147
larva L2
 
 1807
larva L3 12hr old
 
 1765
larva L3 puffstage 1-2
 
 2195
larva L3 puffstage 3-6
 
 1171
larva L3 puffstage 7-9
 
 761
white prepupae new
 
 772
white prepupae 12hr
 
 1238
white prepupae 24hr
 
 774
pupae 2d postWPP
 
 899
pupae 3d postWPP
 
 1355
pupae 4d postWPP
 
 6080
adult male 01day
 
 3886
adult male 05day
 
 3052
adult male 30day
 
 3288
adult female 01day
 
 5153
adult female 05day
 
 4252
adult female 30day
 
 4676
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
log, scaled to maximum FBgn0031836 expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 5769
embryo 02-04hr
 
 9324
embryo 04-06hr
 
 8544
embryo 06-08hr
 
 6832
embryo 08-10hr
 
 4720
embryo 10-12hr
 
 3509
embryo 12-14hr
 
 2695
embryo 14-16hr
 
 2400
embryo 16-18hr
 
 2216
embryo 18-20hr
 
 2688
embryo 20-22hr
 
 2894
embryo 22-24hr
 
 3061
larva L1
 
 2147
larva L2
 
 1807
larva L3 12hr old
 
 1765
larva L3 puffstage 1-2
 
 2195
larva L3 puffstage 3-6
 
 1171
larva L3 puffstage 7-9
 
 761
white prepupae new
 
 772
white prepupae 12hr
 
 1238
white prepupae 24hr
 
 774
pupae 2d postWPP
 
 899
pupae 3d postWPP
 
 1355
pupae 4d postWPP
 
 6080
adult male 01day
 
 3886
adult male 05day
 
 3052
adult male 30day
 
 3288
adult female 01day
 
 5153
adult female 05day
 
 4252
adult female 30day
 
 4676
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Very low expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5769)
embryo 02-04hr
 (9324)
embryo 04-06hr
 (8544)
embryo 06-08hr
 (6832)
embryo 08-10hr
 (4720)
embryo 10-12hr
 (3509)
embryo 12-14hr
 (2695)
embryo 14-16hr
 (2400)
embryo 16-18hr
 (2216)
embryo 18-20hr
 (2688)
embryo 20-22hr
 (2894)
embryo 22-24hr
 (3061)
larva L1
 (2147)
larva L2
 (1807)
larva L3 12hr old
 (1765)
larva L3 puffstage 1-2
 (2195)
larva L3 puffstage 3-6
 (1171)
larva L3 puffstage 7-9
 (761)
white prepupae new
 (772)
white prepupae 12hr
 (1238)
white prepupae 24hr
 (774)
pupae 2d postWPP
 (899)
pupae 3d postWPP
 (1355)
pupae 4d postWPP
 (6080)
adult male 01day
 (3886)
adult male 05day
 (3052)
adult male 30day
 (3288)
adult female 01day
 (5153)
adult female 05day
 (4252)
adult female 30day
 (4676)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (5769)
embryo 02-04hr
 (9324)
embryo 04-06hr
 (8544)
embryo 06-08hr
 (6832)
embryo 08-10hr
 (4720)
embryo 10-12hr
 (3509)
embryo 12-14hr
 (2695)
embryo 14-16hr
 2400
embryo 16-18hr
 2216
embryo 18-20hr
 (2688)
embryo 20-22hr
 (2894)
embryo 22-24hr
 (3061)
larva L1
 2147
larva L2
 1807
larva L3 12hr old
 1765
larva L3 puffstage 1-2
 2195
larva L3 puffstage 3-6
 
 1171
larva L3 puffstage 7-9
 
 761
white prepupae new
 
 772
white prepupae 12hr
 
 1238
white prepupae 24hr
 
 774
pupae 2d postWPP
 
 899
pupae 3d postWPP
 
 1355
pupae 4d postWPP
 (6080)
adult male 01day
 (3886)
adult male 05day
 (3052)
adult male 30day
 (3288)
adult female 01day
 (5153)
adult female 05day
 (4252)
adult female 30day
 (4676)
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5769
embryo 02-04hr
 
 9324
embryo 04-06hr
 
 8544
embryo 06-08hr
 
 6832
embryo 08-10hr
 
 4720
embryo 10-12hr
 
 3509
embryo 12-14hr
 
 2695
embryo 14-16hr
 
 2400
embryo 16-18hr
 
 2216
embryo 18-20hr
 
 2688
embryo 20-22hr
 
 2894
embryo 22-24hr
 
 3061
larva L1
 
 2147
larva L2
 
 1807
larva L3 12hr old
 
 1765
larva L3 puffstage 1-2
 
 2195
larva L3 puffstage 3-6
 
 1171
larva L3 puffstage 7-9
 
 761
white prepupae new
 
 772
white prepupae 12hr
 
 1238
white prepupae 24hr
 
 774
pupae 2d postWPP
 
 899
pupae 3d postWPP
 
 1355
pupae 4d postWPP
 
 6080
adult male 01day
 
 3886
adult male 05day
 
 3052
adult male 30day
 
 3288
adult female 01day
 
 5153
adult female 05day
 
 4252
adult female 30day
 
 4676
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 5769
embryo 02-04hr
 
 9324
embryo 04-06hr
 
 8544
embryo 06-08hr
 
 6832
embryo 08-10hr
 
 4720
embryo 10-12hr
 
 3509
embryo 12-14hr
 
 2695
embryo 14-16hr
 
 2400
embryo 16-18hr
 
 2216
embryo 18-20hr
 
 2688
embryo 20-22hr
 
 2894
embryo 22-24hr
 
 3061
larva L1
 
 2147
larva L2
 
 1807
larva L3 12hr old
 
 1765
larva L3 puffstage 1-2
 
 2195
larva L3 puffstage 3-6
 
 1171
larva L3 puffstage 7-9
 
 761
white prepupae new
 
 772
white prepupae 12hr
 
 1238
white prepupae 24hr
 
 774
pupae 2d postWPP
 
 899
pupae 3d postWPP
 
 1355
pupae 4d postWPP
 
 6080
adult male 01day
 
 3886
adult male 05day
 
 3052
adult male 30day
 
 3288
adult female 01day
 
 5153
adult female 05day
 
 4252
adult female 30day
 
 4676
Expression Level Scale
 None 
 Extremely low 
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

FlyAtlas Anatomical Expression Data for FBgn0031836


   Styles
Linear
Logarithmic
Heatmap
Back-to-back
   Scales
max expr for FBgn0031836
Moderate expression bin max
High level expression bin max
Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Nearly all larval and adult organs/tissues expressed at moderate or high levels. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult midgut, adult hindgut, larval/adult Malpighian tubules, adult heart, adult fat body, adult salivary gland, adult female reproductive system, adult carcass. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system, larval hindgut, larval fat body, larval salivary gland, larval trachea, adult male accessory gland, larval carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (1000 - 25000)

Linear, scaled to maximum FBgn0031836 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 280.05
Larval Midgut
 
 548.4
Larval Hindgut
 
 467.3
Larval Malpighian Tubules
 
 520.3
Larval Fat Body
 
 215.5
Larval Salivary Gland
 
 161.4
Larval Trachea
 
 274.225
Larval Carcass
 
 477.5
Adult Head
 
 877.9
Adult Eye
 
 1393.825
Adult Brain
 
 607.5
Adult Thoracic-Abdominal Ganglion
 
 713.2
Adult Crop
 
 593.4
Adult Midgut
 
 814
Adult Hindgut
 
 630.1
Adult Malpighian Tubules
 
 1096.6
Adult Fat Body
 
 986.7
Adult Salivary Gland
 
 899.4
Adult Heart
 
 912.175
Adult VirginFemale Spermatheca
 
 645.8
Adult InseminatedFemale Spermatheca
 
 854.6
Adult Ovary
 
 506.8
Adult Testis
 
 35.8
Adult Male Accessory Gland
 
 252.3
Adult Carcass
 
 1086.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 280.05
Larval Midgut
 (548.4)
Larval Hindgut
 
 467.3
Larval Malpighian Tubules
 520.3
Larval Fat Body
 
 215.5
Larval Salivary Gland
 
 161.4
Larval Trachea
 
 274.225
Larval Carcass
 
 477.5
Adult Head
 (877.9)
Adult Eye
 (1393.825)
Adult Brain
 (607.5)
Adult Thoracic-Abdominal Ganglion
 (713.2)
Adult Crop
 (593.4)
Adult Midgut
 (814)
Adult Hindgut
 (630.1)
Adult Malpighian Tubules
 (1096.6)
Adult Fat Body
 (986.7)
Adult Salivary Gland
 (899.4)
Adult Heart
 (912.175)
Adult VirginFemale Spermatheca
 (645.8)
Adult InseminatedFemale Spermatheca
 (854.6)
Adult Ovary
 506.8
Adult Testis
 
 35.8
Adult Male Accessory Gland
 
 252.3
Adult Carcass
 (1086.2)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 280.05
Larval Midgut
 
 548.4
Larval Hindgut
 
 467.3
Larval Malpighian Tubules
 
 520.3
Larval Fat Body
 
 215.5
Larval Salivary Gland
 
 161.4
Larval Trachea
 
 274.225
Larval Carcass
 
 477.5
Adult Head
 
 877.9
Adult Eye
 (1393.825)
Adult Brain
 
 607.5
Adult Thoracic-Abdominal Ganglion
 
 713.2
Adult Crop
 
 593.4
Adult Midgut
 
 814
Adult Hindgut
 
 630.1
Adult Malpighian Tubules
 (1096.6)
Adult Fat Body
 
 986.7
Adult Salivary Gland
 
 899.4
Adult Heart
 
 912.175
Adult VirginFemale Spermatheca
 
 645.8
Adult InseminatedFemale Spermatheca
 
 854.6
Adult Ovary
 
 506.8
Adult Testis
 
 35.8
Adult Male Accessory Gland
 
 252.3
Adult Carcass
 (1086.2)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 280.05
Larval Midgut
 
 548.4
Larval Hindgut
 
 467.3
Larval Malpighian Tubules
 
 520.3
Larval Fat Body
 
 215.5
Larval Salivary Gland
 
 161.4
Larval Trachea
 
 274.225
Larval Carcass
 
 477.5
Adult Head
 
 877.9
Adult Eye
 
 1393.825
Adult Brain
 
 607.5
Adult Thoracic-Abdominal Ganglion
 
 713.2
Adult Crop
 
 593.4
Adult Midgut
 
 814
Adult Hindgut
 
 630.1
Adult Malpighian Tubules
 
 1096.6
Adult Fat Body
 
 986.7
Adult Salivary Gland
 
 899.4
Adult Heart
 
 912.175
Adult VirginFemale Spermatheca
 
 645.8
Adult InseminatedFemale Spermatheca
 
 854.6
Adult Ovary
 
 506.8
Adult Testis
 
 35.8
Adult Male Accessory Gland
 
 252.3
Adult Carcass
 
 1086.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to maximum FBgn0031836 expression level
Tissue   Expression Level
Larval Central Nervous System
 
 280.05
Larval Midgut
 
 548.4
Larval Hindgut
 
 467.3
Larval Malpighian Tubules
 
 520.3
Larval Fat Body
 
 215.5
Larval Salivary Gland
 
 161.4
Larval Trachea
 
 274.225
Larval Carcass
 
 477.5
Adult Head
 
 877.9
Adult Eye
 
 1393.825
Adult Brain
 
 607.5
Adult Thoracic-Abdominal Ganglion
 
 713.2
Adult Crop
 
 593.4
Adult Midgut
 
 814
Adult Hindgut
 
 630.1
Adult Malpighian Tubules
 
 1096.6
Adult Fat Body
 
 986.7
Adult Salivary Gland
 
 899.4
Adult Heart
 
 912.175
Adult VirginFemale Spermatheca
 
 645.8
Adult InseminatedFemale Spermatheca
 
 854.6
Adult Ovary
 
 506.8
Adult Testis
 
 35.8
Adult Male Accessory Gland
 
 252.3
Adult Carcass
 
 1086.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 280.05
Larval Midgut
 548.4
Larval Hindgut
 
 467.3
Larval Malpighian Tubules
 520.3
Larval Fat Body
 
 215.5
Larval Salivary Gland
 
 161.4
Larval Trachea
 
 274.225
Larval Carcass
 
 477.5
Adult Head
 (877.9)
Adult Eye
 (1393.825)
Adult Brain
 607.5
Adult Thoracic-Abdominal Ganglion
 713.2
Adult Crop
 593.4
Adult Midgut
 814
Adult Hindgut
 630.1
Adult Malpighian Tubules
 (1096.6)
Adult Fat Body
 (986.7)
Adult Salivary Gland
 (899.4)
Adult Heart
 (912.175)
Adult VirginFemale Spermatheca
 645.8
Adult InseminatedFemale Spermatheca
 (854.6)
Adult Ovary
 506.8
Adult Testis
 
 35.8
Adult Male Accessory Gland
 
 252.3
Adult Carcass
 (1086.2)
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 280.05
Larval Midgut
 
 548.4
Larval Hindgut
 
 467.3
Larval Malpighian Tubules
 
 520.3
Larval Fat Body
 
 215.5
Larval Salivary Gland
 
 161.4
Larval Trachea
 
 274.225
Larval Carcass
 
 477.5
Adult Head
 
 877.9
Adult Eye
 1393.825
Adult Brain
 
 607.5
Adult Thoracic-Abdominal Ganglion
 
 713.2
Adult Crop
 
 593.4
Adult Midgut
 
 814
Adult Hindgut
 
 630.1
Adult Malpighian Tubules
 1096.6
Adult Fat Body
 
 986.7
Adult Salivary Gland
 
 899.4
Adult Heart
 
 912.175
Adult VirginFemale Spermatheca
 
 645.8
Adult InseminatedFemale Spermatheca
 
 854.6
Adult Ovary
 
 506.8
Adult Testis
 
 35.8
Adult Male Accessory Gland
 
 252.3
Adult Carcass
 1086.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 280.05
Larval Midgut
 
 548.4
Larval Hindgut
 
 467.3
Larval Malpighian Tubules
 
 520.3
Larval Fat Body
 
 215.5
Larval Salivary Gland
 
 161.4
Larval Trachea
 
 274.225
Larval Carcass
 
 477.5
Adult Head
 
 877.9
Adult Eye
 
 1393.825
Adult Brain
 
 607.5
Adult Thoracic-Abdominal Ganglion
 
 713.2
Adult Crop
 
 593.4
Adult Midgut
 
 814
Adult Hindgut
 
 630.1
Adult Malpighian Tubules
 
 1096.6
Adult Fat Body
 
 986.7
Adult Salivary Gland
 
 899.4
Adult Heart
 
 912.175
Adult VirginFemale Spermatheca
 
 645.8
Adult InseminatedFemale Spermatheca
 
 854.6
Adult Ovary
 
 506.8
Adult Testis
 
 35.8
Adult Male Accessory Gland
 
 252.3
Adult Carcass
 
 1086.2
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 877.9
 
NA 
Eye
 
 1393.825
 
NA 
Brain
 
 607.5
 
280.05 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 713.2
 
NA 
Crop
 
 593.4
 
548.4 
Midgut
 
 814
 
467.3 
Hindgut
 
 630.1
 
520.3 
Malpighian Tubules
 
 1096.6
 
215.5 
Fat Body
 
 986.7
 
161.4 
Salivary Gland
 
 899.4
 
NA 
Heart
 
 912.175
 
274.225 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 645.8
 
NA 
InseminatedFemale Spermatheca
 
 854.6
 
NA 
Ovary
 
 506.8
 
NA 
Testis
 
 35.8
 
NA 
Male Accessory Gland
 
 252.3
 
477.5 
Carcass
 
 1086.2

modENCODE Temporal Expression Data (Graveley et al., 2011)
FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 6 )
For All Classical Alleles Show

Allele of CG11050ClassMutagenStocksKnown lesion
CG11050CB-6980-3
1 --
CG11050d021371 --
CG11050e021711 --
CG11050EY002031 --
CG11050f044041 --
CG11050NP2084
1 --
hide Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show

Allele of CG11050ClassMutagenStocksKnown lesion
CG11050GD53421 Yes
CG11050KK1090341 Yes
hide Aneuploid Aberrations
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
UAS construct
Insertions
Type of insertions
Name
Expression data
insertion of mobile activating element
insertion of enhancer trap
insertion of enhancer trap binary system
hide Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
hide Terms Based on Experimental Evidence ( 0 terms )
hide Terms Based on Predictions or Assertions ( 2 terms )
Molecular Function
CV term
References
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
Protein-protein
Interacting group
Assay
References
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
CG11050 allele
Gene
References
hide External Data
Linkouts
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
Genome-wide drosophilid orthologs
Curated drosophilid orthologs
Linkouts
InParanoid A subset of ortholog calls from InParanoid.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 8 )
Bloomington
Harvard
Kyoto
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 142 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
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hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for database merge of
Source for merge of: CG11050 BcDNA:LD22339
Additional comments
Source for merge of CG11050 BcDNA:LD22339 was a shared cDNA (date:020730).
hide Other Comments
Expression is enriched in embryonic gonads.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
Linkouts
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InParanoid A subset of ortholog calls from InParanoid.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs.
hide Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym
BcDNA:LD22339
 
Name Synonym
Secondary FlyBase IDs
  • FBgn0063152
hide References ( 13 )
Research paper
Shigenobu et al., 2006, Proc. Natl. Acad. Sci. USA 103(37): 13728--13733
Molecular characterization of embryonic gonads by gene expression profiling in Drosophila melanogaster. [FBrf0193273]
Borras, 2003, Genetics 163(2): 637--645
Transcription profiling in Drosophila eyes that overexpress the human glaucoma-associated trabecular meshwork-inducible glucocorticoid response protein/myocilin (TIGR/MYOC). [FBrf0157243]
Supplementary material
The modENCODE Consortium, 2010, Science 330(6012):
DataS14: Gene co-expression clusters. [FBrf0213979]
Mummery-Widmer et al., 2009, Nature 458(7241):
Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Oh et al., 2003, Genetics 163(1):
Table S1. [FBrf0157097]
Personal communication to FlyBase
Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center
RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510]
Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center
RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms.
Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis
FlyBase Curators, 2008, Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations.
Insertion identifiers and alleles based on genomic location of insertions with respect to gene annotations. [FBrf0202955]
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]
Computer file
Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection.
Genomic mapping of Exelixis insertion collection. [FBrf0184340]
Gene Disruption Project members, 2001-, [title not yet available]
[title not yet available] [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project.
Berkeley Drosophila Genome Project. [FBrf0125078]