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Gene Dmel\CG11188

General Information
Symbol	Dmel\CG11188	Species	D. melanogaster
Name		Annotation symbol	CG11188
Feature type	protein_coding_gene	FlyBase ID	FBgn0031851
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	27A1-27A1	Sequence location	2L:6,717,625..6,719,389 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG11188 (FBgn0031851). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: neurogenesis. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: AATF leucine zipper-containing domain; Apoptosis-antagonizing transcription factor, C-terminal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, during early larval stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult ovary. Comments on Affy2 ProbeSet: ProbeSet 1624335_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG11188. Gene sequence location is 2L:6717625..6719389.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 27A1-27A1   Limits computationally determined from genome sequence between P{EP}Sec61αEP2180 and P{lacW}Ate1k10809
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG11188 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.45
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG11188-RA FBtr0079299  NM_135222   1703   488
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG11188-PA   FBpp0078929   56.0   488   4.48     NP_609066   AAF52427
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Apoptosis-antagonizing transcription factor, C-terminal (IPR012617) AATF leucine zipper-containing domain (IPR025160)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA202384   AA941414   AA950741   AA952144   AE014134 AAF52427   AI239183   AI514933   AX094066   AY071275 AAL48897   BF488506   BG632926   BI234907   BI374643   BI573290   BI573854   CK604687   CK604688   CL943549   CO301267   CO303630   CO303637   CO323312   CO327991   CZ480827   EC065587   EC065588   EC074568   EC087055   EC089447   EC203063   EC215099   EC234693   EV600721   GH738994   GH739787   GH764249   GH766584   GH767165   GH767189
UniProtKB/Swiss-Prot	Q9VM95
UniProtKB/TrEMBL
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   anterior endoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi ectoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi mesoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi organism | ubiquitous   (Fisher et al., 2012) posterior ectoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi embryonic stage 7 -- 8   anterior endoderm anlage   (Fisher et al., 2012) head mesoderm   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) posterior endoderm   (Fisher et al., 2012) trunk mesoderm   (Fisher et al., 2012) embryonic stage 9 -- 10   anterior endoderm   (Fisher et al., 2012) head mesoderm   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) posterior endoderm   (Fisher et al., 2012) trunk mesoderm   (Fisher et al., 2012) embryonic stage 11 -- 12   anterior midgut primordium   (Fisher et al., 2012) dorsal pharyngeal muscle primordium   (Fisher et al., 2012) posterior midgut primordium   (Fisher et al., 2012) salivary gland body primordium   (Fisher et al., 2012) Comment:reported as salivary gland primordium somatic muscle primordium   (Fisher et al., 2012) Comment:reported as muscle system primordium visceral muscle primordium   (Fisher et al., 2012) Comment:reported as muscle system primordium trunk mesoderm   (Fisher et al., 2012) embryonic stage 13 -- 16   dorsal pharyngeal muscle   (Fisher et al., 2012) embryonic/larval midgut   (Fisher et al., 2012) embryonic/larval muscle system   (Fisher et al., 2012) embryonic/larval somatic muscle   (Fisher et al., 2012) embryonic/larval visceral muscle   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult ovary. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    77.05 Larval Midgut    30.1 Larval Hindgut    43.5 Larval Malpighian Tubules    28 Larval Fat Body    22.3 Larval Salivary Gland    52.1 Larval Trachea    68.05 Larval Carcass    59.325 Adult Head    36.4 Adult Eye    35.25 Adult Brain    50.9 Adult Thoracic-Abdominal Ganglion    61.1 Adult Crop    45.1 Adult Midgut    47.8 Adult Hindgut    35.8 Adult Malpighian Tubules    32.7 Adult Fat Body    48.1 Adult Salivary Gland    49.3 Adult Heart    37.85 Adult VirginFemale Spermatheca    27.7 Adult InseminatedFemale Spermatheca    31.8 Adult Ovary    122.1 Adult Testis    32.1 Adult Male Accessory Gland    69 Adult Carcass    43.7 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    77.05 Larval Midgut    30.1 Larval Hindgut    43.5 Larval Malpighian Tubules    28 Larval Fat Body    22.3 Larval Salivary Gland    52.1 Larval Trachea    68.05 Larval Carcass    59.325 Adult Head    36.4 Adult Eye    35.25 Adult Brain    50.9 Adult Thoracic-Abdominal Ganglion    61.1 Adult Crop    45.1 Adult Midgut    47.8 Adult Hindgut    35.8 Adult Malpighian Tubules    32.7 Adult Fat Body    48.1 Adult Salivary Gland    49.3 Adult Heart    37.85 Adult VirginFemale Spermatheca    27.7 Adult InseminatedFemale Spermatheca    31.8 Adult Ovary    122.1 Adult Testis    32.1 Adult Male Accessory Gland    69 Adult Carcass    43.7 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    77.05 Larval Midgut    30.1 Larval Hindgut    43.5 Larval Malpighian Tubules    28 Larval Fat Body    22.3 Larval Salivary Gland    52.1 Larval Trachea    68.05 Larval Carcass    59.325 Adult Head    36.4 Adult Eye    35.25 Adult Brain    50.9 Adult Thoracic-Abdominal Ganglion    61.1 Adult Crop    45.1 Adult Midgut    47.8 Adult Hindgut    35.8 Adult Malpighian Tubules    32.7 Adult Fat Body    48.1 Adult Salivary Gland    49.3 Adult Heart    37.85 Adult VirginFemale Spermatheca    27.7 Adult InseminatedFemale Spermatheca    31.8 Adult Ovary    122.1 Adult Testis    32.1 Adult Male Accessory Gland    69 Adult Carcass    43.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    77.05 Larval Midgut    30.1 Larval Hindgut    43.5 Larval Malpighian Tubules    28 Larval Fat Body    22.3 Larval Salivary Gland    52.1 Larval Trachea    68.05 Larval Carcass    59.325 Adult Head    36.4 Adult Eye    35.25 Adult Brain    50.9 Adult Thoracic-Abdominal Ganglion    61.1 Adult Crop    45.1 Adult Midgut    47.8 Adult Hindgut    35.8 Adult Malpighian Tubules    32.7 Adult Fat Body    48.1 Adult Salivary Gland    49.3 Adult Heart    37.85 Adult VirginFemale Spermatheca    27.7 Adult InseminatedFemale Spermatheca    31.8 Adult Ovary    122.1 Adult Testis    32.1 Adult Male Accessory Gland    69 Adult Carcass    43.7 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    77.05 Larval Midgut    30.1 Larval Hindgut    43.5 Larval Malpighian Tubules    28 Larval Fat Body    22.3 Larval Salivary Gland    52.1 Larval Trachea    68.05 Larval Carcass    59.325 Adult Head    36.4 Adult Eye    35.25 Adult Brain    50.9 Adult Thoracic-Abdominal Ganglion    61.1 Adult Crop    45.1 Adult Midgut    47.8 Adult Hindgut    35.8 Adult Malpighian Tubules    32.7 Adult Fat Body    48.1 Adult Salivary Gland    49.3 Adult Heart    37.85 Adult VirginFemale Spermatheca    27.7 Adult InseminatedFemale Spermatheca    31.8 Adult Ovary    122.1 Adult Testis    32.1 Adult Male Accessory Gland    69 Adult Carcass    43.7 Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    77.05 Larval Midgut    30.1 Larval Hindgut    43.5 Larval Malpighian Tubules    28 Larval Fat Body    22.3 Larval Salivary Gland    52.1 Larval Trachea    68.05 Larval Carcass    59.325 Adult Head    36.4 Adult Eye    35.25 Adult Brain    50.9 Adult Thoracic-Abdominal Ganglion    61.1 Adult Crop    45.1 Adult Midgut    47.8 Adult Hindgut    35.8 Adult Malpighian Tubules    32.7 Adult Fat Body    48.1 Adult Salivary Gland    49.3 Adult Heart    37.85 Adult VirginFemale Spermatheca    27.7 Adult InseminatedFemale Spermatheca    31.8 Adult Ovary    122.1 Adult Testis    32.1 Adult Male Accessory Gland    69 Adult Carcass    43.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    77.05 Larval Midgut    30.1 Larval Hindgut    43.5 Larval Malpighian Tubules    28 Larval Fat Body    22.3 Larval Salivary Gland    52.1 Larval Trachea    68.05 Larval Carcass    59.325 Adult Head    36.4 Adult Eye    35.25 Adult Brain    50.9 Adult Thoracic-Abdominal Ganglion    61.1 Adult Crop    45.1 Adult Midgut    47.8 Adult Hindgut    35.8 Adult Malpighian Tubules    32.7 Adult Fat Body    48.1 Adult Salivary Gland    49.3 Adult Heart    37.85 Adult VirginFemale Spermatheca    27.7 Adult InseminatedFemale Spermatheca    31.8 Adult Ovary    122.1 Adult Testis    32.1 Adult Male Accessory Gland    69 Adult Carcass    43.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    77.05 Larval Midgut    30.1 Larval Hindgut    43.5 Larval Malpighian Tubules    28 Larval Fat Body    22.3 Larval Salivary Gland    52.1 Larval Trachea    68.05 Larval Carcass    59.325 Adult Head    36.4 Adult Eye    35.25 Adult Brain    50.9 Adult Thoracic-Abdominal Ganglion    61.1 Adult Crop    45.1 Adult Midgut    47.8 Adult Hindgut    35.8 Adult Malpighian Tubules    32.7 Adult Fat Body    48.1 Adult Salivary Gland    49.3 Adult Heart    37.85 Adult VirginFemale Spermatheca    27.7 Adult InseminatedFemale Spermatheca    31.8 Adult Ovary    122.1 Adult Testis    32.1 Adult Male Accessory Gland    69 Adult Carcass    43.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    36.4   NA  Eye    35.25   NA  Brain    50.9   77.05  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    61.1   NA  Crop    45.1   30.1  Midgut    47.8   43.5  Hindgut    35.8   28  Malpighian Tubules    32.7   no informative data  Fat Body    48.1   52.1  Salivary Gland    49.3   NA  Heart    37.85   68.05  Trachea    NA   NA  VirginFemale Spermatheca    27.7   NA  InseminatedFemale Spermatheca    31.8   NA  Ovary    122.1   NA  Testis    32.1   NA  Male Accessory Gland    69   59.325  Carcass    43.7 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    14 central nervous system, larvae L3    13 central nervous system, pupae P8    12 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    4 head, mated 1-day female    5 head, mated 4-day female    9 head, mated 20-day female    3 head, mated 1-day male    6 head, mated 4-day male    6 head, mated 20-day male    6 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    3 digestive system, 4-day adult    7 digestive system, 20-day adult    4 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    0 carcass, larvae L3 wandering    9 carcass, 1-day adult    4 carcass, 4-day adult    9 carcass, 20-day adult    5 ovary, virgin 4-day female    37 ovary, mated 4-day female    40 testis, mated 4-day male    8 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    14 central nervous system, larvae L3    13 central nervous system, pupae P8    12 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    4 head, mated 1-day female    5 head, mated 4-day female    9 head, mated 20-day female    3 head, mated 1-day male    6 head, mated 4-day male    6 head, mated 20-day male    6 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    3 digestive system, 4-day adult    7 digestive system, 20-day adult    4 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    0 carcass, larvae L3 wandering    9 carcass, 1-day adult    4 carcass, 4-day adult    9 carcass, 20-day adult    5 ovary, virgin 4-day female  (37) ovary, mated 4-day female  (40) testis, mated 4-day male    8 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    14 central nervous system, larvae L3    13 central nervous system, pupae P8    12 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    4 head, mated 1-day female    5 head, mated 4-day female    9 head, mated 20-day female    3 head, mated 1-day male    6 head, mated 4-day male    6 head, mated 20-day male    6 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    3 digestive system, 4-day adult    7 digestive system, 20-day adult    4 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    0 carcass, larvae L3 wandering    9 carcass, 1-day adult    4 carcass, 4-day adult    9 carcass, 20-day adult    5 ovary, virgin 4-day female    37 ovary, mated 4-day female    40 testis, mated 4-day male    8 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    14 central nervous system, larvae L3    13 central nervous system, pupae P8    12 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    4 head, mated 1-day female    5 head, mated 4-day female    9 head, mated 20-day female    3 head, mated 1-day male    6 head, mated 4-day male    6 head, mated 20-day male    6 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    3 digestive system, 4-day adult    7 digestive system, 20-day adult    4 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    0 carcass, larvae L3 wandering    9 carcass, 1-day adult    4 carcass, 4-day adult    9 carcass, 20-day adult    5 ovary, virgin 4-day female    37 ovary, mated 4-day female    40 testis, mated 4-day male    8 accessory gland, mated 4-day male    5 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    14 central nervous system, larvae L3    13 central nervous system, pupae P8    12 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    4 head, mated 1-day female    5 head, mated 4-day female    9 head, mated 20-day female    3 head, mated 1-day male    6 head, mated 4-day male    6 head, mated 20-day male    6 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    3 digestive system, 4-day adult    7 digestive system, 20-day adult    4 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    0 carcass, larvae L3 wandering    9 carcass, 1-day adult    4 carcass, 4-day adult    9 carcass, 20-day adult    5 ovary, virgin 4-day female    37 ovary, mated 4-day female    40 testis, mated 4-day male    8 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    14 central nervous system, larvae L3    13 central nervous system, pupae P8    12 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    4 head, mated 1-day female    5 head, mated 4-day female    9 head, mated 20-day female    3 head, mated 1-day male    6 head, mated 4-day male    6 head, mated 20-day male    6 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    3 digestive system, 4-day adult    7 digestive system, 20-day adult    4 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    0 carcass, larvae L3 wandering    9 carcass, 1-day adult    4 carcass, 4-day adult    9 carcass, 20-day adult    5 ovary, virgin 4-day female  (37) ovary, mated 4-day female  (40) testis, mated 4-day male    8 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    14 central nervous system, larvae L3    13 central nervous system, pupae P8    12 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    4 head, mated 1-day female    5 head, mated 4-day female    9 head, mated 20-day female    3 head, mated 1-day male    6 head, mated 4-day male    6 head, mated 20-day male    6 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    3 digestive system, 4-day adult    7 digestive system, 20-day adult    4 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    0 carcass, larvae L3 wandering    9 carcass, 1-day adult    4 carcass, 4-day adult    9 carcass, 20-day adult    5 ovary, virgin 4-day female    37 ovary, mated 4-day female    40 testis, mated 4-day male    8 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    14 central nervous system, larvae L3    13 central nervous system, pupae P8    12 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    4 head, mated 1-day female    5 head, mated 4-day female    9 head, mated 20-day female    3 head, mated 1-day male    6 head, mated 4-day male    6 head, mated 20-day male    6 salivary gland, larvae L3 wandering    0 salivary gland, white prepupae    1 digestive system, larvae L3 wandering    4 digestive system, 1-day adult    3 digestive system, 4-day adult    7 digestive system, 20-day adult    4 fat body, larvae L3 wandering    1 fat body, white prepupae    4 fat body, pupae P8    0 carcass, larvae L3 wandering    9 carcass, 1-day adult    4 carcass, 4-day adult    9 carcass, 20-day adult    5 ovary, virgin 4-day female    37 ovary, mated 4-day female    40 testis, mated 4-day male    8 accessory gland, mated 4-day male    5 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed at stages throughout embryogenesis, during early larval stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    39 embryo 02-04hr    39 embryo 04-06hr    35 embryo 06-08hr    40 embryo 08-10hr    49 embryo 10-12hr    43 embryo 12-14hr    33 embryo 14-16hr    16 embryo 16-18hr    15 embryo 18-20hr    11 embryo 20-22hr    21 embryo 22-24hr    21 larva L1    26 larva L2    17 larva L3 12hr old    11 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    8 white prepupae new    8 white prepupae 12hr    7 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    8 pupae 4d postWPP    4 adult male 01day    4 adult male 05day    5 adult male 30day    4 adult female 01day    15 adult female 05day    28 adult female 30day    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (39) embryo 02-04hr  (39) embryo 04-06hr  (35) embryo 06-08hr  (40) embryo 08-10hr  (49) embryo 10-12hr  (43) embryo 12-14hr  (33) embryo 14-16hr    16 embryo 16-18hr    15 embryo 18-20hr    11 embryo 20-22hr    21 embryo 22-24hr    21 larva L1  26 larva L2    17 larva L3 12hr old    11 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    8 white prepupae new    8 white prepupae 12hr    7 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    8 pupae 4d postWPP    4 adult male 01day    4 adult male 05day    5 adult male 30day    4 adult female 01day    15 adult female 05day  (28) adult female 30day  (29) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    39 embryo 02-04hr    39 embryo 04-06hr    35 embryo 06-08hr    40 embryo 08-10hr    49 embryo 10-12hr    43 embryo 12-14hr    33 embryo 14-16hr    16 embryo 16-18hr    15 embryo 18-20hr    11 embryo 20-22hr    21 embryo 22-24hr    21 larva L1    26 larva L2    17 larva L3 12hr old    11 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    8 white prepupae new    8 white prepupae 12hr    7 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    8 pupae 4d postWPP    4 adult male 01day    4 adult male 05day    5 adult male 30day    4 adult female 01day    15 adult female 05day    28 adult female 30day    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    39 embryo 02-04hr    39 embryo 04-06hr    35 embryo 06-08hr    40 embryo 08-10hr    49 embryo 10-12hr    43 embryo 12-14hr    33 embryo 14-16hr    16 embryo 16-18hr    15 embryo 18-20hr    11 embryo 20-22hr    21 embryo 22-24hr    21 larva L1    26 larva L2    17 larva L3 12hr old    11 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    8 white prepupae new    8 white prepupae 12hr    7 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    8 pupae 4d postWPP    4 adult male 01day    4 adult male 05day    5 adult male 30day    4 adult female 01day    15 adult female 05day    28 adult female 30day    29 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    39 embryo 02-04hr    39 embryo 04-06hr    35 embryo 06-08hr    40 embryo 08-10hr    49 embryo 10-12hr    43 embryo 12-14hr    33 embryo 14-16hr    16 embryo 16-18hr    15 embryo 18-20hr    11 embryo 20-22hr    21 embryo 22-24hr    21 larva L1    26 larva L2    17 larva L3 12hr old    11 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    8 white prepupae new    8 white prepupae 12hr    7 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    8 pupae 4d postWPP    4 adult male 01day    4 adult male 05day    5 adult male 30day    4 adult female 01day    15 adult female 05day    28 adult female 30day    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (39) embryo 02-04hr  (39) embryo 04-06hr  (35) embryo 06-08hr  (40) embryo 08-10hr  (49) embryo 10-12hr  (43) embryo 12-14hr  (33) embryo 14-16hr    16 embryo 16-18hr    15 embryo 18-20hr    11 embryo 20-22hr    21 embryo 22-24hr    21 larva L1  26 larva L2    17 larva L3 12hr old    11 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    8 white prepupae new    8 white prepupae 12hr    7 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    8 pupae 4d postWPP    4 adult male 01day    4 adult male 05day    5 adult male 30day    4 adult female 01day    15 adult female 05day  28 adult female 30day  29 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    39 embryo 02-04hr    39 embryo 04-06hr    35 embryo 06-08hr    40 embryo 08-10hr    49 embryo 10-12hr    43 embryo 12-14hr    33 embryo 14-16hr    16 embryo 16-18hr    15 embryo 18-20hr    11 embryo 20-22hr    21 embryo 22-24hr    21 larva L1    26 larva L2    17 larva L3 12hr old    11 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    8 white prepupae new    8 white prepupae 12hr    7 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    8 pupae 4d postWPP    4 adult male 01day    4 adult male 05day    5 adult male 30day    4 adult female 01day    15 adult female 05day    28 adult female 30day    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    39 embryo 02-04hr    39 embryo 04-06hr    35 embryo 06-08hr    40 embryo 08-10hr    49 embryo 10-12hr    43 embryo 12-14hr    33 embryo 14-16hr    16 embryo 16-18hr    15 embryo 18-20hr    11 embryo 20-22hr    21 embryo 22-24hr    21 larva L1    26 larva L2    17 larva L3 12hr old    11 larva L3 puffstage 1-2    6 larva L3 puffstage 3-6    7 larva L3 puffstage 7-9    8 white prepupae new    8 white prepupae 12hr    7 white prepupae 24hr    9 pupae 2d postWPP    9 pupae 3d postWPP    8 pupae 4d postWPP    4 adult male 01day    4 adult male 05day    5 adult male 30day    4 adult female 01day    15 adult female 05day    28 adult female 30day    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    25 embryonic 1182-4H    22 embryonic GM2    20 embryonic Kc167    66 embryonic S1    31 embryonic S3    26 leg disc CME L1    31 wing disc CME-W2    34 wing disc ML-DmD8    23 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    24 wing disc ML-DmD32    15 haltere disc ML-DmD17-c3    22 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    21 mixed discs ML-DmD4-c1    44 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    53 tumorous blood cells mbn2    37 ovary fGS/OSS    28 ovary OSC    40 ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  26 Schneider line 2 Sg4    25 embryonic 1182-4H    22 embryonic GM2    20 embryonic Kc167  (66) embryonic S1  (31) embryonic S3  26 leg disc CME L1  (31) wing disc CME-W2  (34) wing disc ML-DmD8    23 wing disc ML-DmD9    17 wing disc ML-DmD16-c3  (37) wing disc ML-DmD21    24 wing disc ML-DmD32    15 haltere disc ML-DmD17-c3    22 eye-antennal disc ML-DmD11  (30) antennal disc ML-DmD20-c5    21 mixed discs ML-DmD4-c1  (44) CNS ML-DmBG1-c1  (40) CNS ML-DmBG2-c2  (53) tumorous blood cells mbn2  (37) ovary fGS/OSS  (28) ovary OSC  (40) ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    25 embryonic 1182-4H    22 embryonic GM2    20 embryonic Kc167    66 embryonic S1    31 embryonic S3    26 leg disc CME L1    31 wing disc CME-W2    34 wing disc ML-DmD8    23 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    24 wing disc ML-DmD32    15 haltere disc ML-DmD17-c3    22 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    21 mixed discs ML-DmD4-c1    44 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    53 tumorous blood cells mbn2    37 ovary fGS/OSS    28 ovary OSC    40 ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    25 embryonic 1182-4H    22 embryonic GM2    20 embryonic Kc167    66 embryonic S1    31 embryonic S3    26 leg disc CME L1    31 wing disc CME-W2    34 wing disc ML-DmD8    23 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    24 wing disc ML-DmD32    15 haltere disc ML-DmD17-c3    22 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    21 mixed discs ML-DmD4-c1    44 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    53 tumorous blood cells mbn2    37 ovary fGS/OSS    28 ovary OSC    40 ovary OSS    21 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    25 embryonic 1182-4H    22 embryonic GM2    20 embryonic Kc167    66 embryonic S1    31 embryonic S3    26 leg disc CME L1    31 wing disc CME-W2    34 wing disc ML-DmD8    23 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    24 wing disc ML-DmD32    15 haltere disc ML-DmD17-c3    22 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    21 mixed discs ML-DmD4-c1    44 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    53 tumorous blood cells mbn2    37 ovary fGS/OSS    28 ovary OSC    40 ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  26 Schneider line 2 Sg4    25 embryonic 1182-4H    22 embryonic GM2    20 embryonic Kc167  (66) embryonic S1  31 embryonic S3  26 leg disc CME L1  31 wing disc CME-W2  (34) wing disc ML-DmD8    23 wing disc ML-DmD9    17 wing disc ML-DmD16-c3  (37) wing disc ML-DmD21    24 wing disc ML-DmD32    15 haltere disc ML-DmD17-c3    22 eye-antennal disc ML-DmD11  30 antennal disc ML-DmD20-c5    21 mixed discs ML-DmD4-c1  (44) CNS ML-DmBG1-c1  (40) CNS ML-DmBG2-c2  (53) tumorous blood cells mbn2  (37) ovary fGS/OSS  28 ovary OSC  (40) ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    25 embryonic 1182-4H    22 embryonic GM2    20 embryonic Kc167    66 embryonic S1    31 embryonic S3    26 leg disc CME L1    31 wing disc CME-W2    34 wing disc ML-DmD8    23 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    24 wing disc ML-DmD32    15 haltere disc ML-DmD17-c3    22 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    21 mixed discs ML-DmD4-c1    44 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    53 tumorous blood cells mbn2    37 ovary fGS/OSS    28 ovary OSC    40 ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    25 embryonic 1182-4H    22 embryonic GM2    20 embryonic Kc167    66 embryonic S1    31 embryonic S3    26 leg disc CME L1    31 wing disc CME-W2    34 wing disc ML-DmD8    23 wing disc ML-DmD9    17 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    24 wing disc ML-DmD32    15 haltere disc ML-DmD17-c3    22 eye-antennal disc ML-DmD11    30 antennal disc ML-DmD20-c5    21 mixed discs ML-DmD4-c1    44 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    53 tumorous blood cells mbn2    37 ovary fGS/OSS    28 ovary OSC    40 ovary OSS    21 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    15 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    36 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    28 Zinc 5 mM 12 hrs, larvae L3    3 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    7 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    20 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    15 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult  (36) Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult  (28) Zinc 5 mM 12 hrs, larvae L3    3 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    7 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (29) Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    20 Paraquat 10 mM 48 hrs, 4-day adult  (33) Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    15 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    36 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    28 Zinc 5 mM 12 hrs, larvae L3    3 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    7 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    20 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    15 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    36 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    28 Zinc 5 mM 12 hrs, larvae L3    3 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    7 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    20 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    15 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    36 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    28 Zinc 5 mM 12 hrs, larvae L3    3 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    7 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    20 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    15 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult  (36) Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult  28 Zinc 5 mM 12 hrs, larvae L3    3 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    7 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  29 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    20 Paraquat 10 mM 48 hrs, 4-day adult  (33) Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    15 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    36 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    28 Zinc 5 mM 12 hrs, larvae L3    3 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    7 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    20 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    9 cold shock, 4-day adult    9 heat shock, 4-day adult    15 Cadmium 50 mM 6 hrs, larvae L3    5 Cadmium 50 mM 12 hrs, larvae L3    5 Cadmium 50 mM 48 hrs, 4-day adult    16 Cadmium 100 mM 48 hrs, 4-day adult    36 Copper 0.5 mM 12 hrs, larvae L3    8 Copper 15 mM 48 hrs, 4-day adult    28 Zinc 5 mM 12 hrs, larvae L3    3 Zinc 4.5 mM 48 hrs, 4-day adult    21 Ethanol 2.5% 3 hrs, larvae L3    19 Ethanol 5% 3 hrs, larvae L3    4 Ethanol 10% 3 hrs, larvae L3    7 Caffeine 1.5 mg/ml 4 hrs, larvae L3    4 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    29 Caffeine 25 mg/ml 48 hrs, 4-day adult    11 Paraquat 5 mM 48 hrs, 4-day adult    20 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    8 Rotenone 8 μg 12 hrs, larvae L3    9 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_08 mE1_20_mRNA_expression_cluster_04
External Data & Images
Linkouts	BDGP expression data • RE30678 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031851 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11188-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG11188 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal CG11188GD7229 lethal | pupal stage, with Scer\GAL4pnr-MD237 CG11188GD7229 Other Phenotypes Allele neuroanatomy defective | larval stage CG11188GD7229 Phenotype manifest in Allele embryonic/larval neuroblast | larval stage CG11188GD7229 ganglion mother cell | larval stage CG11188GD7229
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG11188 Class Mutagen Stocks Known lesion CG11188e03057 piggyBac transposase 2 -- CG11188EY13022 P-element activity 2 -- CG11188A1332 0 Yes
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG11188 Class Mutagen Stocks Known lesion CG11188GD7229 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG11188KK100453 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG11188NIG.11188R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel7027 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD7229} NA P{KK100453} NA P{NIG.11188R} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EPgy2}CG11188EY13022 NA P{Mae-UAS.6.11}B0583B0583 NA P{Mae-UAS.6.11}B1267B1267 NA P{Mae-UAS.6.11}CG11188A1332 NA miscellaneous insertions PBac{RB}CG11188e03057 NA insertion of enhancer trap P{lacW}l(2)SH1207SH1207 No
Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
	There is no information supporting a molecular function term for this gene. (Based on a review of available data before: 2006)
Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process
CV term Evidence References
neurogenesis inferred from mutant phenotype (Neumüller et al., 2011)
Cellular Component ( 0 terms)
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
nucleus inferred from sequence or structural similarity with UniProtKB:Q9NY61 (assigned by UniProtKB) (UniProtKB Project Members, 2005.7.19)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG11188 - Arp2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Arpc1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Arpc2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Arpc3A anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Arpc4 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Arpc5 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CG10306 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CG10641 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CG1218 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CG12828 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CG2199 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CG3862 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CG5642 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CG5746 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CG7049 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CG8578 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CG9769 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - CkIIα anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - FK506-bp2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Hsc70-1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Hsp68 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Int6 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - LanB1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Mtpα anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Ote anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Plod anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - RpS11 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - RpS21 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Tango7 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - Tm1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - bocksbeutel anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - cpb anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - eIF3-S8 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - isoQC anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - mRpS33 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11188 - mTerf3 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG11188 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 60096 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0031851 DroID - A comprehensive database of gene and protein interactions. • FBgn0031851 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33943
Orthologs
OrthoDB Orthologs (46) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6MSDJ6 Dipteran inclusive ortholog search EOG679FGX Insect inclusive ortholog search EOG6RXWW0 Arthropod inclusive ortholog search EOG61ZCSM Metazoa inclusive ortholog search EOG62RS26
Orthologs in Drosophila Species (EOG6MSDJ6)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG11188     Drosophila simulans   Dsim\GD23427 Y   Drosophila sechellia   Dsec\GM16208 Y   Drosophila erecta   Dere\GG10429 Y   Drosophila yakuba   Dyak\GE14077 Y   Drosophila ananassae   Dana\GF14948 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA25444 Y   Drosophila persimilis   Dper\GL25784 Y   Drosophila willistoni   Dwil\GK24803 Y   Drosophila virilis   Dvir\GJ12452 Y   Drosophila mojavensis   Dmoj\GI11279 Y   Drosophila grimshawi   Dgri\GH10706 Y
Orthologs in non-Drosophila Dipterans (EOG679FGX)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL010885   Anopheles gambiae Malaria mosquito  Agam\AGAP007394   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ005946
Orthologs in non-Dipteran Insects (EOG6RXWW0)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB53195   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG013044   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH26284   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH26285   Atta cephalotes Leafcutter ant  Acep\ACEP11529   Camponotus floridanus Florida carpenter ant  Cflo\CFLO21380   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL22897   Linepithema humile Argentine ant  Lhum\LH17015   Linepithema humile Argentine ant  Lhum\LH20759   Linepithema humile Argentine ant  Lhum\LH17018   Pogonomyrmex barbatus Red harvester ant  Pbar\PB19284   Solenopsis invicta Red fire ant  Sinv\SINV24680   Solenopsis invicta Red fire ant  Sinv\SINV11546   Acyrthosiphon pisum Pea aphid  Apim\ACYPI072178   Acyrthosiphon pisum Pea aphid  Apim\ACYPI43408   Acyrthosiphon pisum Pea aphid  Apim\ACYPI003817   Bombyx mori Silkmoth  Bmor\BGIBMGA002766   Pediculus humanus Human body louse  Phum\PHUM018530   Tribolium castaneum Red flour beetle  Tcas\TC009771
Orthologs in non-Insect Arthropods (EOG61ZCSM)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\DPOL   Ixodes scapularis Deer tick  Isca\ISCW007431   Ixodes scapularis Deer tick  Isca\ISCW007430
Orthologs in non-Arthropod Metazoa (EOG62RS26)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\Y73E7A.2   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_008040gn   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_027793gn   Danio rerio Zebrafish  Drer\aatf   Xenopus tropicalis Western clawed frog  Xtro\aatf   Gallus gallus Domestic chicken  Ggal\AATF   Mus musculus House mouse  Mmus\Aatf   Rattus norvegicus Norway rat  Rnor\Aatf   Homo sapiens Human  Hsap\AATF
Human Orthologs (1)
Gene OMIM HGNC Hsap\AATF
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD23427 Drosophila sechellia Dsec\GM16208 Drosophila erecta Dere\GG10429 Drosophila yakuba Dyak\GE14077 Drosophila ananassae Dana\GF14948 Drosophila pseudoobscura pseudoobscura Dpse\GA25444 Drosophila persimilis Dper\GL25784 Drosophila willistoni Dwil\GK24803 Drosophila virilis Dvir\GJ12452 Drosophila mojavensis Dmoj\GI11279 Drosophila grimshawi Dgri\GH10706
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	18112 w1118; PBac{RB}CG11188e03057/CyO 20852 y1 w67c23; P{EPgy2}CG11188EY13022/CyO
Harvard	- PBac{RB}CG11188e03057
Kyoto	114682 yd2 w1118 P{ey-FLP.N}2; P{EPgy2}CG11188EY13022 P{neoFRT}40A/CyO y+
VDRC	v106977 P{KK100453}VIE-260B v18182 w1118; P{GD7229}v18182
Genomic Clones ( 1 )
	BACR22N03 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 26 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE30678
Other clones	DPiM_RE30678
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT23796 GH16211 GM05180 LD02561 LD25544 LD29217 LD30850 LD46567 RE62282
Other clones	Dmel_neb_012390_0821_2605 EK180613 EK190148 EK242249 EK242261 EP08404 RH08971 RH09344 RP001006755 RP001021993 RP001022797 RP001033895 RP001047048 RP001048372 UT01376
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0031851 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33943
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG11188 anon-WO0118547.190 (FlyBase, 1996-)
Additional comments	Source for merge of CG11188 anon-WO0118547.190 was sequence comparison (date:051113). (FlyBase, 1996-)
Other Comments
	Area matching Drosophila EST AA950741. (Davies, 2001.3.15)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_135222 RefSeq (Proteins) • NP_609066 DDBJ / EMBL / GenBank • AA950741 AAF52427 AAL48897 AX094066 AY071275 BI234907 CL943549 CZ480827 Entrez Gene - A searchable database of RefSeq genes. • 33943 UniProtKB/Swiss-Prot • Q9VM95
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Apoptosis-antagonizing transcription factor, C-terminal (IPR012617) AATF leucine zipper-containing domain (IPR025160) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • RE30678
Linkouts
	BioGRID - A database of protein and genetic interactions • 60096 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0031851 DroID - A comprehensive database of gene and protein interactions. • FBgn0031851 DRSC - Results from RNAi screens. • FBgn0031851 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031851 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11188-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0031851 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 33943 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 33943 modMine - Data generated by the modENCODE project. • FBgn0031851
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	anon-WO0118547.190   CG11188 (UniProtKB Project Members, 2005.7.19, Izutsu et al., 2012, Grieder et al., 2007, Grönke et al., 2007, Bharucha et al., 2008, Keleman et al., 2009.8.5, Japanese National Institute of Genetics, 2012.5.21)
Name Synonym
Secondary FlyBase IDs
	FBgn0062181
References ( 27 )
Generate a list of	All references relating to this gene ( 27 )
List References by type	Research paper  ( 4 ) Supplementary material  ( 7 ) Personal communication to FlyBase  ( 8 ) FlyBase analysis  ( 3 ) Protein sequence record  ( 1 ) Stock list  ( 1 ) Patent  ( 1 ) DNA/RNA sequence record  ( 1 ) Website  ( 1 )
Recent research papers ( 2 )
	Izutsu et al., 2012, PLoS ONE 7(3): e33288 Genome features of "dark-fly", a Drosophila line reared long-term in a dark environment. [FBrf0217825] Krauchunas et al., 2012, Dev. Biol. 370(1): 125--134 Protein phosphorylation changes reveal new candidates in the regulation of egg activation and early embryogenesis in D. melanogaster. [FBrf0219342] Show all research papers ...