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Gene Dmel\pes

General Information
Symbol	Dmel\pes	Species	D. melanogaster
Name	peste	Annotation symbol	CG7228
Feature type	protein_coding_gene	FlyBase ID	FBgn0031969
Gene Model Status	Current	Stock availability	13 publicly available
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	28D3-28D3	Sequence location	2L:7,986,786..7,994,184 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene peste is referred to in FlyBase by the symbol Dmel\pes (CG7228, FBgn0031969). It is a protein_coding_gene from Drosophila melanogaster. It is reported to have molecular function: scavenger receptor activity. It is reported to be involved in the biological process: defense response. 16 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: CD36 antigen. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, adult spermathecae, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1634913_s_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of pes. Gene sequence location is 2L:7986786..7994184.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 28D3-28D3   Limits computationally determined from genome sequence between P{EP}CG7231EP2510 and P{lacW}l(2)k10210k10210
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\pes for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.45
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) pes-RC FBtr0114550  NM_001144336   2915   555 pes-RD FBtr0300183  NM_164777   2973   555 pes-RE FBtr0331673  NM_001273290   519   87 pes-RF FBtr0331674  NM_135324   2532   555
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein pes-PC   FBpp0113042   62.3   555   7.25     NP_001137808   ACL83014 pes-PD   FBpp0289420   62.3   555   7.25     NP_723328   AAN10649 pes-PE   FBpp0304063   10.1   87   10.60     NP_001260219   AGB92755 pes-PF   FBpp0304064   62.3   555   7.25     NP_609168   AAF52584
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • CD36 antigen (IPR002159)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA141088   AA141089   AE014134 AAF52584   AE014134 AAN10649   AE014134 ACL83014   AE014134 AGB92755   AI257526   AI258883   AY084131 AAL89869   BI166422   BI173141   BI214924   BI232619   BI234185   BI236740   BI237211   BI242351   BI364020   BI570683   BI570968   BI572179   BI573032   BI590739   BI590766   BI591251   BT124777   CK132092   CO154011   CO154412   CO183026   CO187299   CO188266   CO192335   CO268933   CO275350   CO279864   CO286407   CO287280   CO287541   CO298439   CO301780   CO306287   CO306294   CO318808   CS133183   CZ473001   CZ474278   CZ474518   CZ486847   DN154225   EC065863   EC065867   EC066911   EC072144   EC072274   EC076454   EC080448   EC194624   EC195750   EC196091   EC200065   EC203211   EC212537   EC219973   EC230491   EC237101   EC267393   EV580869   EV582143   EV582835   EV584045   EV595580   GH747862   GH748017   GH748073   GH748280   GH748405   GH748487   GH748580   GH748648   GH748672   GH748998   GH749027   GH749152   GH750030   GH751074   GH751089   GH751123   GH751805   GH751842   GH751852   GH752100   GH752261   GH752293   GH752574   GH752892   GH753181   GH753229   GH753626   GH753909   GH754096   GH754189   GH754364   GH754570   GH754581   GH754593   GH754762   GH755080   GH755123   GH756206   GH756244   GH756307   GH756740   GH757117   GH757221   GH757837   GH757879   GH757990   GH758339   GH758786   GH758958   GH759183   GH759940   GH759958   GH760066   GH760308   GH760460   GH760578   GH761059   GH761111   GH761351   GH770196   GH770346   GH770766   GH770795   GH770918   GH770934   GH771430   GH771663   GH771842   GH772117   GH772427   GH772550   GH772906   GH772909   GH773456   GH774044   GH774058   GH774116   GH774358   GH774542   GH774858   GH775045   GH775156   GH775210   GH775270   GH775393   GH775664   GH775680   GH775784   GH775806   GH775863   GH775900   GH775961   GH776320   GH776381   GH776620   GH776632   GH776696   GH776787   GH777066   GH777093   GH777163   GH777609   GH778078   GH778172   GH778199   GH778460   GH778543   GH778983   GH779020   GH779991   GH780270   GH780817   GH780900   GH781047   GH781049   GH781079   GH781102   GH781323   GH781348   GH781512   GH782067   GH782132   GH782320   GH782568   GH782873   GH783270   GH783394   GH783751   GH784062   GH784077   GH784117   GH784202   GH784567   GH784715   GH784998   GH785202   GH785225   GH785546   GH785548   GH785705   GH785773   GH785880   GH786024   GH786077   GH786205   GH786325   GH786371   GH786540   GH786552   GH786605   GH786727   GH786855   GH786878   GH786880   GH787098   GH787152   GH787270   GH787648   GH787699   GH787991   GH788241   GH788353   GH788366   GH788440   GH788611   GH788633   GH788762   GH788973   GH788993   GH789247   GH789566   GH789882   GH789943   GH789972   GH789992   GH790029   GH790089   GH790427   GH790485   GH790816   GH791514   GH791623   GH791729   GH792702   GH792753   GH793152   GH794066   GH794120   GH794141   GH794153   GH794436   GH795725   GH795983   GH795984   GH796050   GH796370   GH796384   GH796512   GH796920   GH797248   GH797278   GH797769   GH797927   GH798222   GH798699   GH798725   GH799218   GH799365   GH799507   GH799590   GH799807   GH799845   GH800065   GH800252   GH801514   GH801714   GH801802   GH802136   GH802205   GH802654   GH802920   GH803919   GH804356   GH804381   GH804405   GH804412   GH804478   GH804912   GH805137   GH805249   GH805516   GH806003   GH806038   GH806471   GH806828   GH807684   GH808228   GH808455   GH808623   GH808859   GH808942   GH809124   GH809432   GH809923   GH810670   GH810671   GH811034   GH811061   GH811111   GH811247   GH811271   GH811517   GH811834   GH812947   GH813268   GH813366   GH813466   GH813911   GH814073   GH814978   GH814989   GH815120   GH816236   GH816247   GH816262   GH816439   GH816687   GH817345   GH817530   GH817628   GH817694   GH817879   GH818225   GH818292   GH818352   GH818572   GH818621   GH819280   GH819482   GH819681   GH819974   GH820075   GH820086   GH820130   GH820279   GH820534   GH820850   GH821345   GH821399   GH821967   GH822100   GH822978   GH823096   GH823800   GH823901   GH824281   GH824424   GH825004   GH825014   GH825488   GH825600   GH825789   GH825824   GH826292   GH826617   GH826869   GH826946   GH827014   GH827114   GH827199   GH827321   GH827463   GH828069   GH828361   GH828494   GH828931   GH828956   GH829197   GH829214   GH829367   GH829604   GH830168   GH830357   GH830364   GH830586   GH831012   GH831074   GH831363   GH831587   GH831969   GH832049   GH832057   GH832094   GH832116   GH832128   GH832242   GH832355   GH832444   GH832563   GH832776   GH832863   GH833352   GH833571   GH834137   GH834630   GH834660   GH834711   GH834857   GH835646   GH835812   GH836271   GH836819   GH836853   GH836881   GH837081   GH837354   GH837355   GH837587   GH837807   GH838805   GH839003   GH839162   GH839339   GH839756   GH840088   GH840404   GH840508   GH840673   GH840916   GH840953   GH841106   GH841768   GH841966   GH842142   GH842149   GH842159   GH842198   GH842685   GH843180   GH843538   GH843568   GH843575   GH843691   GH844701   GH844719   GH845389   GH845776   GH845817   GH845981   GH846076   GH846247   GH846420   GH846698   GH846766   GH848337   GH848390   GH848476   GH848820   GH848973   GH849305   GH849685   GH849723   GH849975   GH849983   GH850269   GH850273   GH850418   GH850468   GH850797   GH850814   GH850937   GH851055   GH851190   GH851232   GH851272   GH851303   GH851309   GH851457   GH851523   GH851688   GH851948   GH852219   GH852296   GH852649   GH852738   GH853068   GH853072   GH853215   GH853318   GH853582   GH853621   GH853904   GH854283   GH854674   GH854831   GH854886   GH854935   GH854973   GH855280   GH855420   GH855891   GH856016   GH856105   GH856399   GH856809   GH856866   GH856888   GH857024   GH857185   GH857424   GH857617   GH858040   GH858052   GH858072   GH858378   GH858536   GH859017   GH859101   GH859602   GH859651   GH859988   GH860660   GH861202   GH861712   GH861994   GH862067   GH862369   GH862391   GH862440   GH862511   GH862742   GH863152   GH863373   GH863542   GH863929   GH864215   GH864342   GH864365   GH864681   GH864845   GH865094   GH865811   GH866253   GH866387   GH866500   GH866538   GH866545   GH866588   GH866616   GH866696   GH866826   GH867012   GH867174   GH867357   GH867856   GH868350   GH868360   GH868867   GH869049   GH869200   GH869476   GH869681   GH869763   GH869810   GH869952   GH870246   GH870338   GH870362   GH870651   GH870913   GH871480   GH871726   GH871909   GH872196   GH872330   GH872521   GH872863   GH873418   GH873545   GH873953   GH874121   GH874384   GH874624   GH874759   GH874780   GH874918   GH875143   GH875187   GH875515   GH875658   GH875861   GH876340   GH876882   GH877209   GH877443   GH877450   GH877496   GH877532   GH878191   GH878419   GH878468   GH878472   GH878488   GH878516   GH878580   GH878692   GH878849   GH878956   GH879282   GH879710   GH879835   GH879881   GH880289   GH880594   GH880763   GH880881   GH881172   GH881367   GH882000   GH882214   GH882471   GH882613   GH883253   GH883900   GH884208   GH884224   GH884294   GH884404   GH884712   GH884718   GH884935   GH884953   GH884998   GH885127   GH885603   GH885671   GH885876   GH885974   GH886233   GH886268   GH886606   GH886828   GH886979   GH887502   GH887784   GH887821   GH887850   GH888181   GH888365   GH888420   GH888705   GH889005   GH889126   GH889206   GH889766   GH889834   GH889966   GH889995   GH890736   GH890828   GH890979   GH890981   GH890988   GH891100   GH891283   GH891322   GH891410   GH891620   GH891740   GH891758   GH891811   GH891967   GH892136   GH892748   GH893589   GH893840   GH893961   GH894035   GH894261   GH894380   GH894505   GH894524   GH894628   GH894943   GH895066   GH895858   GH896008   GH896100   GH896269   GH896403   GH896503   GH896633   GH897234   GH897738   GH898342   GH898793   GH898852   GH899091   GH899113   GH899127   GH899269   GH899328   GH899452   GH899576   GH899630   GH899647   GH900205   GH900800   GH901019   GH901393   GH901395   GH901497   GH901944   GH902816   GH902883   GH903181   GH903315   GH903479   GH903749   GH904084   GH904165   GH904519   GH904696   GH904823   GH905318   GH905527   GH905895   GH906028   GH906122   GH906290   GH906967   GH907084   GH907345   GH907520   GH907695   GH907894   GH908276   GH908304   GH908338   GH908358   GH908612   GH908775   GH908999   GH909380   GH909825   GH911048   GH911818   GH911998   GH912040   GH912113   GH912556   GH912659   GH913139   GH913307   GH913462   GH913597   GH913768   GH913883   GH913928   GH914056   GH914477   GH914486   GH914622   GH914674   GH914697   GH914853   GH914877   GH914908   GH914974   GH914998   GH915094   GH915173   GH915439   GH915548   GH915654   GH915732   GH915788   GH915869   GH916046   GH916456   GH916486   GH917180   GH917611   GH917813   GH918145   GH918153   GH918292   GH918409   GH918545   GH919297   GH920112   GH920450   GH920649   GH920883   GH921518   GH921687   GH922942   GH923004   GH923171   GH923470   GH924651   GH924815   GH925174   GH925824   GH925992   GH926344   GH926670   GH926975   GH927005   GH927105   GH927412   GH927431   GH927507   GH927774   GH927847   GH928035   GH928414   GH928439   GH928657   GH928676   GH928906   GH928910   GH928937   GH929634   GH929876   GH929888   GH930261   GH930601   GH930814   GH931047   GH931413   GH931448   GH931474   GH931572   GH931647   GH931697   GH931727   GH931730   GH931734   GH932044   GH932091   GH932126   GH932235   GH932285   GH932398   GH932669   GH932749   GH933815   GH934222   GH934479   GH934497   GH934540   GH934650   GH934940   GH935250   GH935913   GH936204   GH936316   GH936417   GH936591   GH936814   GH936834   GH937011   GH937131   GH937340   GH937621   GH937994   GH938003   GH938061   GH938188   GH938268   GH938609   GH938943   GH939182   GH939294   GH939450   GH940033   GH940184   GH940311   GH940327   GH940334   GH940414   GH940578   GH950961
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	B7Z031 Q8SXU4
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   organism   (Fisher et al., 2012) embryonic stage 7 -- 8   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 9 -- 10   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 11 -- 12   organism | ubiquitous   (Fisher et al., 2012) embryonic stage 13 -- 16   organism | ubiquitous   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system, adult crop, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, adult salivary gland, adult spermathecae, adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    62.4 Larval Midgut    876.6 Larval Hindgut    261.1 Larval Malpighian Tubules    217 Larval Fat Body    184.7 Larval Salivary Gland    50.7 Larval Trachea    51.075 Larval Carcass    84.375 Adult Head    232.2 Adult Eye    251.6 Adult Brain    138.5 Adult Thoracic-Abdominal Ganglion    117.8 Adult Crop    129.5 Adult Midgut    769.4 Adult Hindgut    263.4 Adult Malpighian Tubules    243.6 Adult Fat Body    241.1 Adult Salivary Gland    127.7 Adult Heart    139.975 Adult VirginFemale Spermatheca    105.9 Adult InseminatedFemale Spermatheca    144.9 Adult Ovary    556.3 Adult Testis    14.9 Adult Male Accessory Gland    54.2 Adult Carcass    181.1 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    62.4 Larval Midgut  (876.6) Larval Hindgut    261.1 Larval Malpighian Tubules    217 Larval Fat Body    184.7 Larval Salivary Gland    50.7 Larval Trachea    51.075 Larval Carcass    84.375 Adult Head    232.2 Adult Eye    251.6 Adult Brain    138.5 Adult Thoracic-Abdominal Ganglion    117.8 Adult Crop    129.5 Adult Midgut  (769.4) Adult Hindgut    263.4 Adult Malpighian Tubules    243.6 Adult Fat Body    241.1 Adult Salivary Gland    127.7 Adult Heart    139.975 Adult VirginFemale Spermatheca    105.9 Adult InseminatedFemale Spermatheca    144.9 Adult Ovary  (556.3) Adult Testis    14.9 Adult Male Accessory Gland    54.2 Adult Carcass    181.1 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    62.4 Larval Midgut    876.6 Larval Hindgut    261.1 Larval Malpighian Tubules    217 Larval Fat Body    184.7 Larval Salivary Gland    50.7 Larval Trachea    51.075 Larval Carcass    84.375 Adult Head    232.2 Adult Eye    251.6 Adult Brain    138.5 Adult Thoracic-Abdominal Ganglion    117.8 Adult Crop    129.5 Adult Midgut    769.4 Adult Hindgut    263.4 Adult Malpighian Tubules    243.6 Adult Fat Body    241.1 Adult Salivary Gland    127.7 Adult Heart    139.975 Adult VirginFemale Spermatheca    105.9 Adult InseminatedFemale Spermatheca    144.9 Adult Ovary    556.3 Adult Testis    14.9 Adult Male Accessory Gland    54.2 Adult Carcass    181.1 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    62.4 Larval Midgut    876.6 Larval Hindgut    261.1 Larval Malpighian Tubules    217 Larval Fat Body    184.7 Larval Salivary Gland    50.7 Larval Trachea    51.075 Larval Carcass    84.375 Adult Head    232.2 Adult Eye    251.6 Adult Brain    138.5 Adult Thoracic-Abdominal Ganglion    117.8 Adult Crop    129.5 Adult Midgut    769.4 Adult Hindgut    263.4 Adult Malpighian Tubules    243.6 Adult Fat Body    241.1 Adult Salivary Gland    127.7 Adult Heart    139.975 Adult VirginFemale Spermatheca    105.9 Adult InseminatedFemale Spermatheca    144.9 Adult Ovary    556.3 Adult Testis    14.9 Adult Male Accessory Gland    54.2 Adult Carcass    181.1 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    62.4 Larval Midgut    876.6 Larval Hindgut    261.1 Larval Malpighian Tubules    217 Larval Fat Body    184.7 Larval Salivary Gland    50.7 Larval Trachea    51.075 Larval Carcass    84.375 Adult Head    232.2 Adult Eye    251.6 Adult Brain    138.5 Adult Thoracic-Abdominal Ganglion    117.8 Adult Crop    129.5 Adult Midgut    769.4 Adult Hindgut    263.4 Adult Malpighian Tubules    243.6 Adult Fat Body    241.1 Adult Salivary Gland    127.7 Adult Heart    139.975 Adult VirginFemale Spermatheca    105.9 Adult InseminatedFemale Spermatheca    144.9 Adult Ovary    556.3 Adult Testis    14.9 Adult Male Accessory Gland    54.2 Adult Carcass    181.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    62.4 Larval Midgut  (876.6) Larval Hindgut    261.1 Larval Malpighian Tubules    217 Larval Fat Body    184.7 Larval Salivary Gland    50.7 Larval Trachea    51.075 Larval Carcass    84.375 Adult Head    232.2 Adult Eye    251.6 Adult Brain    138.5 Adult Thoracic-Abdominal Ganglion    117.8 Adult Crop    129.5 Adult Midgut  769.4 Adult Hindgut    263.4 Adult Malpighian Tubules    243.6 Adult Fat Body    241.1 Adult Salivary Gland    127.7 Adult Heart    139.975 Adult VirginFemale Spermatheca    105.9 Adult InseminatedFemale Spermatheca    144.9 Adult Ovary  556.3 Adult Testis    14.9 Adult Male Accessory Gland    54.2 Adult Carcass    181.1 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    62.4 Larval Midgut    876.6 Larval Hindgut    261.1 Larval Malpighian Tubules    217 Larval Fat Body    184.7 Larval Salivary Gland    50.7 Larval Trachea    51.075 Larval Carcass    84.375 Adult Head    232.2 Adult Eye    251.6 Adult Brain    138.5 Adult Thoracic-Abdominal Ganglion    117.8 Adult Crop    129.5 Adult Midgut    769.4 Adult Hindgut    263.4 Adult Malpighian Tubules    243.6 Adult Fat Body    241.1 Adult Salivary Gland    127.7 Adult Heart    139.975 Adult VirginFemale Spermatheca    105.9 Adult InseminatedFemale Spermatheca    144.9 Adult Ovary    556.3 Adult Testis    14.9 Adult Male Accessory Gland    54.2 Adult Carcass    181.1 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    62.4 Larval Midgut    876.6 Larval Hindgut    261.1 Larval Malpighian Tubules    217 Larval Fat Body    184.7 Larval Salivary Gland    50.7 Larval Trachea    51.075 Larval Carcass    84.375 Adult Head    232.2 Adult Eye    251.6 Adult Brain    138.5 Adult Thoracic-Abdominal Ganglion    117.8 Adult Crop    129.5 Adult Midgut    769.4 Adult Hindgut    263.4 Adult Malpighian Tubules    243.6 Adult Fat Body    241.1 Adult Salivary Gland    127.7 Adult Heart    139.975 Adult VirginFemale Spermatheca    105.9 Adult InseminatedFemale Spermatheca    144.9 Adult Ovary    556.3 Adult Testis    14.9 Adult Male Accessory Gland    54.2 Adult Carcass    181.1 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    232.2   NA  Eye    251.6   NA  Brain    138.5   62.4  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    117.8   NA  Crop    129.5   876.6  Midgut    769.4   261.1  Hindgut    263.4   217  Malpighian Tubules    243.6   184.7  Fat Body    241.1   50.7  Salivary Gland    127.7   NA  Heart    139.975   51.075  Trachea    NA   NA  VirginFemale Spermatheca    105.9   NA  InseminatedFemale Spermatheca    144.9   NA  Ovary    556.3   NA  Testis    14.9   NA  Male Accessory Gland    54.2   84.375  Carcass    181.1 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    5 central nervous system, pupae P8    4 head, virgin 1-day female    21 head, virgin 4-day female    23 head, virgin 20-day female    23 head, mated 1-day female    21 head, mated 4-day female    17 head, mated 20-day female    16 head, mated 1-day male    21 head, mated 4-day male    18 head, mated 20-day male    19 salivary gland, larvae L3 wandering    11 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    88 digestive system, 1-day adult    55 digestive system, 4-day adult    55 digestive system, 20-day adult    64 fat body, larvae L3 wandering    9 fat body, white prepupae    14 fat body, pupae P8    8 carcass, larvae L3 wandering    8 carcass, 1-day adult    12 carcass, 4-day adult    16 carcass, 20-day adult    13 ovary, virgin 4-day female    131 ovary, mated 4-day female    91 testis, mated 4-day male    2 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    5 central nervous system, pupae P8    4 head, virgin 1-day female    21 head, virgin 4-day female    23 head, virgin 20-day female    23 head, mated 1-day female    21 head, mated 4-day female    17 head, mated 20-day female    16 head, mated 1-day male    21 head, mated 4-day male    18 head, mated 20-day male    19 salivary gland, larvae L3 wandering    11 salivary gland, white prepupae    4 digestive system, larvae L3 wandering  (88) digestive system, 1-day adult  (55) digestive system, 4-day adult  (55) digestive system, 20-day adult  (64) fat body, larvae L3 wandering    9 fat body, white prepupae    14 fat body, pupae P8    8 carcass, larvae L3 wandering    8 carcass, 1-day adult    12 carcass, 4-day adult    16 carcass, 20-day adult    13 ovary, virgin 4-day female  (131) ovary, mated 4-day female  (91) testis, mated 4-day male    2 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    5 central nervous system, pupae P8    4 head, virgin 1-day female    21 head, virgin 4-day female    23 head, virgin 20-day female    23 head, mated 1-day female    21 head, mated 4-day female    17 head, mated 20-day female    16 head, mated 1-day male    21 head, mated 4-day male    18 head, mated 20-day male    19 salivary gland, larvae L3 wandering    11 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    88 digestive system, 1-day adult    55 digestive system, 4-day adult    55 digestive system, 20-day adult    64 fat body, larvae L3 wandering    9 fat body, white prepupae    14 fat body, pupae P8    8 carcass, larvae L3 wandering    8 carcass, 1-day adult    12 carcass, 4-day adult    16 carcass, 20-day adult    13 ovary, virgin 4-day female  (131) ovary, mated 4-day female    91 testis, mated 4-day male    2 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    5 central nervous system, pupae P8    4 head, virgin 1-day female    21 head, virgin 4-day female    23 head, virgin 20-day female    23 head, mated 1-day female    21 head, mated 4-day female    17 head, mated 20-day female    16 head, mated 1-day male    21 head, mated 4-day male    18 head, mated 20-day male    19 salivary gland, larvae L3 wandering    11 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    88 digestive system, 1-day adult    55 digestive system, 4-day adult    55 digestive system, 20-day adult    64 fat body, larvae L3 wandering    9 fat body, white prepupae    14 fat body, pupae P8    8 carcass, larvae L3 wandering    8 carcass, 1-day adult    12 carcass, 4-day adult    16 carcass, 20-day adult    13 ovary, virgin 4-day female    131 ovary, mated 4-day female    91 testis, mated 4-day male    2 accessory gland, mated 4-day male    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    5 central nervous system, pupae P8    4 head, virgin 1-day female    21 head, virgin 4-day female    23 head, virgin 20-day female    23 head, mated 1-day female    21 head, mated 4-day female    17 head, mated 20-day female    16 head, mated 1-day male    21 head, mated 4-day male    18 head, mated 20-day male    19 salivary gland, larvae L3 wandering    11 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    88 digestive system, 1-day adult    55 digestive system, 4-day adult    55 digestive system, 20-day adult    64 fat body, larvae L3 wandering    9 fat body, white prepupae    14 fat body, pupae P8    8 carcass, larvae L3 wandering    8 carcass, 1-day adult    12 carcass, 4-day adult    16 carcass, 20-day adult    13 ovary, virgin 4-day female    131 ovary, mated 4-day female    91 testis, mated 4-day male    2 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    5 central nervous system, pupae P8    4 head, virgin 1-day female    21 head, virgin 4-day female    23 head, virgin 20-day female    23 head, mated 1-day female    21 head, mated 4-day female    17 head, mated 20-day female    16 head, mated 1-day male    21 head, mated 4-day male    18 head, mated 20-day male    19 salivary gland, larvae L3 wandering    11 salivary gland, white prepupae    4 digestive system, larvae L3 wandering  (88) digestive system, 1-day adult  (55) digestive system, 4-day adult  (55) digestive system, 20-day adult  (64) fat body, larvae L3 wandering    9 fat body, white prepupae    14 fat body, pupae P8    8 carcass, larvae L3 wandering    8 carcass, 1-day adult    12 carcass, 4-day adult    16 carcass, 20-day adult    13 ovary, virgin 4-day female  (131) ovary, mated 4-day female  (91) testis, mated 4-day male    2 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    5 central nervous system, pupae P8    4 head, virgin 1-day female    21 head, virgin 4-day female    23 head, virgin 20-day female    23 head, mated 1-day female    21 head, mated 4-day female    17 head, mated 20-day female    16 head, mated 1-day male    21 head, mated 4-day male    18 head, mated 20-day male    19 salivary gland, larvae L3 wandering    11 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    88 digestive system, 1-day adult    55 digestive system, 4-day adult    55 digestive system, 20-day adult    64 fat body, larvae L3 wandering    9 fat body, white prepupae    14 fat body, pupae P8    8 carcass, larvae L3 wandering    8 carcass, 1-day adult    12 carcass, 4-day adult    16 carcass, 20-day adult    13 ovary, virgin 4-day female  131 ovary, mated 4-day female    91 testis, mated 4-day male    2 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    11 central nervous system, larvae L3    5 central nervous system, pupae P8    4 head, virgin 1-day female    21 head, virgin 4-day female    23 head, virgin 20-day female    23 head, mated 1-day female    21 head, mated 4-day female    17 head, mated 20-day female    16 head, mated 1-day male    21 head, mated 4-day male    18 head, mated 20-day male    19 salivary gland, larvae L3 wandering    11 salivary gland, white prepupae    4 digestive system, larvae L3 wandering    88 digestive system, 1-day adult    55 digestive system, 4-day adult    55 digestive system, 20-day adult    64 fat body, larvae L3 wandering    9 fat body, white prepupae    14 fat body, pupae P8    8 carcass, larvae L3 wandering    8 carcass, 1-day adult    12 carcass, 4-day adult    16 carcass, 20-day adult    13 ovary, virgin 4-day female    131 ovary, mated 4-day female    91 testis, mated 4-day male    2 accessory gland, mated 4-day male    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    68 embryo 02-04hr    8 embryo 04-06hr    15 embryo 06-08hr    18 embryo 08-10hr    14 embryo 10-12hr    18 embryo 12-14hr    17 embryo 14-16hr    13 embryo 16-18hr    14 embryo 18-20hr    17 embryo 20-22hr    19 embryo 22-24hr    24 larva L1    12 larva L2    11 larva L3 12hr old    9 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    16 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    13 white prepupae 24hr    9 pupae 2d postWPP    7 pupae 3d postWPP    5 pupae 4d postWPP    15 adult male 01day    13 adult male 05day    13 adult male 30day    12 adult female 01day    35 adult female 05day    51 adult female 30day    52 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (68) embryo 02-04hr    8 embryo 04-06hr    15 embryo 06-08hr    18 embryo 08-10hr    14 embryo 10-12hr    18 embryo 12-14hr    17 embryo 14-16hr    13 embryo 16-18hr    14 embryo 18-20hr    17 embryo 20-22hr    19 embryo 22-24hr    24 larva L1    12 larva L2    11 larva L3 12hr old    9 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    16 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    13 white prepupae 24hr    9 pupae 2d postWPP    7 pupae 3d postWPP    5 pupae 4d postWPP    15 adult male 01day    13 adult male 05day    13 adult male 30day    12 adult female 01day  (35) adult female 05day  (51) adult female 30day  (52) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    68 embryo 02-04hr    8 embryo 04-06hr    15 embryo 06-08hr    18 embryo 08-10hr    14 embryo 10-12hr    18 embryo 12-14hr    17 embryo 14-16hr    13 embryo 16-18hr    14 embryo 18-20hr    17 embryo 20-22hr    19 embryo 22-24hr    24 larva L1    12 larva L2    11 larva L3 12hr old    9 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    16 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    13 white prepupae 24hr    9 pupae 2d postWPP    7 pupae 3d postWPP    5 pupae 4d postWPP    15 adult male 01day    13 adult male 05day    13 adult male 30day    12 adult female 01day    35 adult female 05day    51 adult female 30day    52 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    68 embryo 02-04hr    8 embryo 04-06hr    15 embryo 06-08hr    18 embryo 08-10hr    14 embryo 10-12hr    18 embryo 12-14hr    17 embryo 14-16hr    13 embryo 16-18hr    14 embryo 18-20hr    17 embryo 20-22hr    19 embryo 22-24hr    24 larva L1    12 larva L2    11 larva L3 12hr old    9 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    16 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    13 white prepupae 24hr    9 pupae 2d postWPP    7 pupae 3d postWPP    5 pupae 4d postWPP    15 adult male 01day    13 adult male 05day    13 adult male 30day    12 adult female 01day    35 adult female 05day    51 adult female 30day    52 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    68 embryo 02-04hr    8 embryo 04-06hr    15 embryo 06-08hr    18 embryo 08-10hr    14 embryo 10-12hr    18 embryo 12-14hr    17 embryo 14-16hr    13 embryo 16-18hr    14 embryo 18-20hr    17 embryo 20-22hr    19 embryo 22-24hr    24 larva L1    12 larva L2    11 larva L3 12hr old    9 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    16 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    13 white prepupae 24hr    9 pupae 2d postWPP    7 pupae 3d postWPP    5 pupae 4d postWPP    15 adult male 01day    13 adult male 05day    13 adult male 30day    12 adult female 01day    35 adult female 05day    51 adult female 30day    52 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (68) embryo 02-04hr    8 embryo 04-06hr    15 embryo 06-08hr    18 embryo 08-10hr    14 embryo 10-12hr    18 embryo 12-14hr    17 embryo 14-16hr    13 embryo 16-18hr    14 embryo 18-20hr    17 embryo 20-22hr    19 embryo 22-24hr    24 larva L1    12 larva L2    11 larva L3 12hr old    9 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    16 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    13 white prepupae 24hr    9 pupae 2d postWPP    7 pupae 3d postWPP    5 pupae 4d postWPP    15 adult male 01day    13 adult male 05day    13 adult male 30day    12 adult female 01day  (35) adult female 05day  (51) adult female 30day  (52) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    68 embryo 02-04hr    8 embryo 04-06hr    15 embryo 06-08hr    18 embryo 08-10hr    14 embryo 10-12hr    18 embryo 12-14hr    17 embryo 14-16hr    13 embryo 16-18hr    14 embryo 18-20hr    17 embryo 20-22hr    19 embryo 22-24hr    24 larva L1    12 larva L2    11 larva L3 12hr old    9 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    16 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    13 white prepupae 24hr    9 pupae 2d postWPP    7 pupae 3d postWPP    5 pupae 4d postWPP    15 adult male 01day    13 adult male 05day    13 adult male 30day    12 adult female 01day    35 adult female 05day    51 adult female 30day    52 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    68 embryo 02-04hr    8 embryo 04-06hr    15 embryo 06-08hr    18 embryo 08-10hr    14 embryo 10-12hr    18 embryo 12-14hr    17 embryo 14-16hr    13 embryo 16-18hr    14 embryo 18-20hr    17 embryo 20-22hr    19 embryo 22-24hr    24 larva L1    12 larva L2    11 larva L3 12hr old    9 larva L3 puffstage 1-2    12 larva L3 puffstage 3-6    16 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    13 white prepupae 24hr    9 pupae 2d postWPP    7 pupae 3d postWPP    5 pupae 4d postWPP    15 adult male 01day    13 adult male 05day    13 adult male 30day    12 adult female 01day    35 adult female 05day    51 adult female 30day    52 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    130 Schneider line 2 Sg4    63 embryonic 1182-4H    28 embryonic GM2    82 embryonic Kc167    80 embryonic S1    28 embryonic S3    17 leg disc CME L1    51 wing disc CME-W2    39 wing disc ML-DmD8    32 wing disc ML-DmD9    29 wing disc ML-DmD16-c3    88 wing disc ML-DmD21    55 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    92 eye-antennal disc ML-DmD11    39 antennal disc ML-DmD20-c5    35 mixed discs ML-DmD4-c1    53 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    47 tumorous blood cells mbn2    118 ovary fGS/OSS    21 ovary OSC    29 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (130) Schneider line 2 Sg4  (63) embryonic 1182-4H  (28) embryonic GM2  (82) embryonic Kc167  (80) embryonic S1  (28) embryonic S3    17 leg disc CME L1  (51) wing disc CME-W2  (39) wing disc ML-DmD8  (32) wing disc ML-DmD9  (29) wing disc ML-DmD16-c3  (88) wing disc ML-DmD21  (55) wing disc ML-DmD32  (32) haltere disc ML-DmD17-c3  (92) eye-antennal disc ML-DmD11  (39) antennal disc ML-DmD20-c5  (35) mixed discs ML-DmD4-c1  (53) CNS ML-DmBG1-c1  (40) CNS ML-DmBG2-c2  (47) tumorous blood cells mbn2  (118) ovary fGS/OSS    21 ovary OSC  (29) ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (130) Schneider line 2 Sg4    63 embryonic 1182-4H    28 embryonic GM2    82 embryonic Kc167    80 embryonic S1    28 embryonic S3    17 leg disc CME L1    51 wing disc CME-W2    39 wing disc ML-DmD8    32 wing disc ML-DmD9    29 wing disc ML-DmD16-c3    88 wing disc ML-DmD21    55 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    92 eye-antennal disc ML-DmD11    39 antennal disc ML-DmD20-c5    35 mixed discs ML-DmD4-c1    53 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    47 tumorous blood cells mbn2  (118) ovary fGS/OSS    21 ovary OSC    29 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    130 Schneider line 2 Sg4    63 embryonic 1182-4H    28 embryonic GM2    82 embryonic Kc167    80 embryonic S1    28 embryonic S3    17 leg disc CME L1    51 wing disc CME-W2    39 wing disc ML-DmD8    32 wing disc ML-DmD9    29 wing disc ML-DmD16-c3    88 wing disc ML-DmD21    55 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    92 eye-antennal disc ML-DmD11    39 antennal disc ML-DmD20-c5    35 mixed discs ML-DmD4-c1    53 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    47 tumorous blood cells mbn2    118 ovary fGS/OSS    21 ovary OSC    29 ovary OSS    13 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    130 Schneider line 2 Sg4    63 embryonic 1182-4H    28 embryonic GM2    82 embryonic Kc167    80 embryonic S1    28 embryonic S3    17 leg disc CME L1    51 wing disc CME-W2    39 wing disc ML-DmD8    32 wing disc ML-DmD9    29 wing disc ML-DmD16-c3    88 wing disc ML-DmD21    55 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    92 eye-antennal disc ML-DmD11    39 antennal disc ML-DmD20-c5    35 mixed discs ML-DmD4-c1    53 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    47 tumorous blood cells mbn2    118 ovary fGS/OSS    21 ovary OSC    29 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (130) Schneider line 2 Sg4  (63) embryonic 1182-4H  28 embryonic GM2  (82) embryonic Kc167  (80) embryonic S1  28 embryonic S3    17 leg disc CME L1  (51) wing disc CME-W2  (39) wing disc ML-DmD8  32 wing disc ML-DmD9  29 wing disc ML-DmD16-c3  (88) wing disc ML-DmD21  (55) wing disc ML-DmD32  32 haltere disc ML-DmD17-c3  (92) eye-antennal disc ML-DmD11  (39) antennal disc ML-DmD20-c5  (35) mixed discs ML-DmD4-c1  (53) CNS ML-DmBG1-c1  (40) CNS ML-DmBG2-c2  (47) tumorous blood cells mbn2  (118) ovary fGS/OSS    21 ovary OSC  29 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  130 Schneider line 2 Sg4    63 embryonic 1182-4H    28 embryonic GM2    82 embryonic Kc167    80 embryonic S1    28 embryonic S3    17 leg disc CME L1    51 wing disc CME-W2    39 wing disc ML-DmD8    32 wing disc ML-DmD9    29 wing disc ML-DmD16-c3    88 wing disc ML-DmD21    55 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    92 eye-antennal disc ML-DmD11    39 antennal disc ML-DmD20-c5    35 mixed discs ML-DmD4-c1    53 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    47 tumorous blood cells mbn2  118 ovary fGS/OSS    21 ovary OSC    29 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    130 Schneider line 2 Sg4    63 embryonic 1182-4H    28 embryonic GM2    82 embryonic Kc167    80 embryonic S1    28 embryonic S3    17 leg disc CME L1    51 wing disc CME-W2    39 wing disc ML-DmD8    32 wing disc ML-DmD9    29 wing disc ML-DmD16-c3    88 wing disc ML-DmD21    55 wing disc ML-DmD32    32 haltere disc ML-DmD17-c3    92 eye-antennal disc ML-DmD11    39 antennal disc ML-DmD20-c5    35 mixed discs ML-DmD4-c1    53 CNS ML-DmBG1-c1    40 CNS ML-DmBG2-c2    47 tumorous blood cells mbn2    118 ovary fGS/OSS    21 ovary OSC    29 ovary OSS    13 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    22 cold shock, 4-day adult    17 heat shock, 4-day adult    35 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    80 Copper 0.5 mM 12 hrs, larvae L3    10 Copper 15 mM 48 hrs, 4-day adult    93 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    30 Ethanol 2.5% 3 hrs, larvae L3    74 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    73 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    59 Paraquat 10 mM 48 hrs, 4-day adult    51 Rotenone 2 μg 12 hrs, larvae L3    30 Rotenone 8 μg 12 hrs, larvae L3    19 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    22 cold shock, 4-day adult    17 heat shock, 4-day adult  (35) Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3  (32) Cadmium 50 mM 48 hrs, 4-day adult  (37) Cadmium 100 mM 48 hrs, 4-day adult  (80) Copper 0.5 mM 12 hrs, larvae L3    10 Copper 15 mM 48 hrs, 4-day adult  (93) Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult  (30) Ethanol 2.5% 3 hrs, larvae L3  (74) Ethanol 5% 3 hrs, larvae L3  (38) Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3  (27) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (73) Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult  (59) Paraquat 10 mM 48 hrs, 4-day adult  (51) Rotenone 2 μg 12 hrs, larvae L3  (30) Rotenone 8 μg 12 hrs, larvae L3    19 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    22 cold shock, 4-day adult    17 heat shock, 4-day adult    35 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    80 Copper 0.5 mM 12 hrs, larvae L3    10 Copper 15 mM 48 hrs, 4-day adult    93 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    30 Ethanol 2.5% 3 hrs, larvae L3    74 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    73 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    59 Paraquat 10 mM 48 hrs, 4-day adult    51 Rotenone 2 μg 12 hrs, larvae L3    30 Rotenone 8 μg 12 hrs, larvae L3    19 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    22 cold shock, 4-day adult    17 heat shock, 4-day adult    35 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    80 Copper 0.5 mM 12 hrs, larvae L3    10 Copper 15 mM 48 hrs, 4-day adult    93 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    30 Ethanol 2.5% 3 hrs, larvae L3    74 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    73 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    59 Paraquat 10 mM 48 hrs, 4-day adult    51 Rotenone 2 μg 12 hrs, larvae L3    30 Rotenone 8 μg 12 hrs, larvae L3    19 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    22 cold shock, 4-day adult    17 heat shock, 4-day adult    35 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    80 Copper 0.5 mM 12 hrs, larvae L3    10 Copper 15 mM 48 hrs, 4-day adult    93 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    30 Ethanol 2.5% 3 hrs, larvae L3    74 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    73 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    59 Paraquat 10 mM 48 hrs, 4-day adult    51 Rotenone 2 μg 12 hrs, larvae L3    30 Rotenone 8 μg 12 hrs, larvae L3    19 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    22 cold shock, 4-day adult    17 heat shock, 4-day adult  (35) Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3  32 Cadmium 50 mM 48 hrs, 4-day adult  (37) Cadmium 100 mM 48 hrs, 4-day adult  (80) Copper 0.5 mM 12 hrs, larvae L3    10 Copper 15 mM 48 hrs, 4-day adult  (93) Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult  30 Ethanol 2.5% 3 hrs, larvae L3  (74) Ethanol 5% 3 hrs, larvae L3  (38) Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3  27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (73) Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult  (59) Paraquat 10 mM 48 hrs, 4-day adult  (51) Rotenone 2 μg 12 hrs, larvae L3  30 Rotenone 8 μg 12 hrs, larvae L3    19 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    22 cold shock, 4-day adult    17 heat shock, 4-day adult    35 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    80 Copper 0.5 mM 12 hrs, larvae L3    10 Copper 15 mM 48 hrs, 4-day adult    93 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    30 Ethanol 2.5% 3 hrs, larvae L3    74 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    73 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    59 Paraquat 10 mM 48 hrs, 4-day adult    51 Rotenone 2 μg 12 hrs, larvae L3    30 Rotenone 8 μg 12 hrs, larvae L3    19 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    22 cold shock, 4-day adult    17 heat shock, 4-day adult    35 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    37 Cadmium 100 mM 48 hrs, 4-day adult    80 Copper 0.5 mM 12 hrs, larvae L3    10 Copper 15 mM 48 hrs, 4-day adult    93 Zinc 5 mM 12 hrs, larvae L3    12 Zinc 4.5 mM 48 hrs, 4-day adult    30 Ethanol 2.5% 3 hrs, larvae L3    74 Ethanol 5% 3 hrs, larvae L3    38 Ethanol 10% 3 hrs, larvae L3    19 Caffeine 1.5 mg/ml 4 hrs, larvae L3    27 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    73 Caffeine 25 mg/ml 48 hrs, 4-day adult    25 Paraquat 5 mM 48 hrs, 4-day adult    59 Paraquat 10 mM 48 hrs, 4-day adult    51 Rotenone 2 μg 12 hrs, larvae L3    30 Rotenone 8 μg 12 hrs, larvae L3    19 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_26 mE1_20_mRNA_expression_cluster_09
External Data & Images
Linkouts	BDGP expression data • RE21078 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031969 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7228-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable pesCB03115 viable, with Scer\GAL4pnr-MD237 pesGD986 Phenotype manifest in Allele
Classical Alleles ( 13 )
For All Classical Alleles Show
Allele of pes Class Mutagen Stocks Known lesion pesd02797 P-element activity 1 -- pesd05420 P-element activity 1 -- pesf04313 piggyBac transposase 1 -- pesKG02497 1 -- pesMI01651 1 -- pesMI02903 1 -- pesNP0179 1 -- pesNP0258 1 -- pesNP1278 1 -- pesNP5265 1 -- pesNP6308 1 -- pesCB03115 P-element activity 0 Yes pesd05035 P-element activity 0 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of pes Class Mutagen Stocks Known lesion pesGD986 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes pesKK106150 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes pesNIG.7228R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Partially disrupted in	Df(2L)snoN (Barrio et al., 2007)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD986} NA P{KK106150} NA P{NIG.7228R} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{Mae-UAS.6.11}B0633B0633 NA P{XP}pesd02797 NA P{XP}pesd05035 NA P{XP}pesd05420 NA insertion of enhancer trap binary system P{GawB}pesNP0179 No P{GawB}pesNP0258 No P{GawB}pesNP1278 No P{GawB}pesNP5265 No P{GawB}pesNP6308 No miscellaneous insertions Mi{MIC}pesMI01651 NA Mi{MIC}pesMI02903 NA P{PTT-GB}pesCB03115 NA P{SUPor-P}pesKG02497 NA PBac{WH}pesf04313 NA
Gene Ontology: Function, Process & Cellular Component ( 5 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 5 terms )
Molecular Function
CV term Evidence References
scavenger receptor activity non-traceable author statement (Lemaitre, 2000.12.20)
Biological Process
CV term Evidence References
cell adhesion inferred from electronic annotation with InterPro:IPR002159 (FlyBase Curators et al., 2004-) defense response non-traceable author statement (Lemaitre, 2000.12.20)
Cellular Component
CV term Evidence References
integral to plasma membrane non-traceable author statement (Lemaitre, 2000.12.20) membrane inferred from electronic annotation with InterPro:IPR002159 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
pes - 14-3-3ζ anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - CG10077 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - CG10887 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - CG12264 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - CG15098 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - CG6724 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - CG7033 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - CG7971 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - CG8545 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Chc anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Cp1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Fmr1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Hsc70-1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Hsp68 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Map205 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Mec2 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Mtpα anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Ns1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Ote anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Saf-B anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Tango4 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Trap1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - Vha55 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - bor anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - cathD anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) pes - eIF-2β anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions pes allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 60221 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0031969 DroID - A comprehensive database of gene and protein interactions. • FBgn0031969 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 34087
Orthologs
OrthoDB Orthologs (50) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6S7K8P Dipteran inclusive ortholog search EOG6HHP9R Insect inclusive ortholog search EOG6TTFD6 Arthropod inclusive ortholog search EOG634TN8 Metazoa inclusive ortholog search No orthologs identified
Orthologs in Drosophila Species (EOG6S7K8P)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\pes     Drosophila simulans   Dsim\GD11979 Y   Drosophila sechellia   Dsec\GM13246 Y   Drosophila erecta   Dere\GG23490 Y   Drosophila yakuba   Dyak\GE11255 Y   Drosophila ananassae   Dana\GF23406 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA20196 Y   Drosophila persimilis   Dper\GL18893 Y   Drosophila willistoni   Dwil\GK14976 Y   Drosophila virilis   Dvir\GJ17482 Y   Drosophila mojavensis   Dmoj\GI17695 Y   Drosophila grimshawi   Dgri\GH13076 Y
Orthologs in non-Drosophila Dipterans (EOG6HHP9R)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL008370 Y Anopheles gambiae Malaria mosquito  Agam\SCRB17 Y Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ017039 Y
Orthologs in non-Dipteran Insects (EOG6TTFD6)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB53014 Y Apis mellifera Western honey bee  Amel\GB44045 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG007445 Y Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG011340 Y Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH16891 Y Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH18246 Y Atta cephalotes Leafcutter ant  Acep\ACEP19494 Y Atta cephalotes Leafcutter ant  Acep\ACEP11359 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO16547 Y Camponotus floridanus Florida carpenter ant  Cflo\CFLO13451 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL22535 Y Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL16324 Y Linepithema humile Argentine ant  Lhum\LH17139 Y Linepithema humile Argentine ant  Lhum\LH26186 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB19375 Y Pogonomyrmex barbatus Red harvester ant  Pbar\PB11199 Y Solenopsis invicta Red fire ant  Sinv\SINV16884 Y Solenopsis invicta Red fire ant  Sinv\SINV14639 Y Acyrthosiphon pisum Pea aphid  Apim\ACYPI009159 Y Bombyx mori Silkmoth  Bmor\BGIBMGA010476 Y Bombyx mori Silkmoth  Bmor\BGIBMGA010477 Y Pediculus humanus Human body louse  Phum\PHUM351630 Y Pediculus humanus Human body louse  Phum\PHUM351640 Y Tribolium castaneum Red flour beetle  Tcas\crq Y Tribolium castaneum Red flour beetle  Tcas\TC012757 Y Tribolium castaneum Red flour beetle  Tcas\TC012758 Y Tribolium castaneum Red flour beetle  Tcas\TC012756 Y
Orthologs in non-Insect Arthropods (EOG634TN8)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\COI Y Daphnia pulex Water flea  Dpux\JGI_V11_307609 Y Daphnia pulex Water flea  Dpux\rbcL Y Daphnia pulex Water flea  Dpux\rbcL Y Daphnia pulex Water flea  Dpux\nad5 Y Ixodes scapularis Deer tick  Isca\ISCW010934 Y Ixodes scapularis Deer tick  Isca\ISCW003371 Y Ixodes scapularis Deer tick  Isca\ISCW023721 Y
Orthologs in non-Arthropod Metazoa (None identified)
No non-Arthropod Metazoa orthologies identified
Human Orthologs (0)
Gene OMIM HGNC
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD11979 Drosophila sechellia Dsec\GM13246 Drosophila erecta Dere\GG23490 Drosophila yakuba Dyak\GE11255 Drosophila ananassae Dana\GF23406 Drosophila pseudoobscura pseudoobscura Dpse\GA20196 Drosophila persimilis Dper\GL18893 Drosophila willistoni Dwil\GK14976 Drosophila virilis Dvir\GJ17482 Drosophila mojavensis Dmoj\GI17695 Drosophila grimshawi Dgri\GH13076
Stocks & Reagents
Stocks Listed in FlyBase ( 13 )
Bloomington	34230 y1 w*; Mi{MIC}pesMI01651 40749 y1 w*; Mi{MIC}pesMI02903 13743 y1 w67c23; P{SUPor-P}pesKG02497
Harvard	- P{XP}pesd02797 - P{XP}pesd05420 - PBac{WH}pesf04313
Kyoto	112075 w*; P{GawB}pesNP0179 / CyO, P{UAS-lacZ.UW14}UW14 103966 y* w*; P{GawB}pesNP1278 / CyO, P{UAS-lacZ.UW14}UW14 104927 y* w*; P{GawB}pesNP5265 / CyO, P{UAS-lacZ.UW14}UW14 112113 y* w*; P{GawB}pesNP0258 / CyO, P{UAS-lacZ.UW14}UW14
VDRC	v100391 P{KK106150}VIE-260B v33155 w1118; P{GD986}v33155
	More stocks available...
Genomic Clones ( 1 )
	BACR08I01 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 886 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE21078
Other clones	DPiM_RE21078 MIP21801
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	LP02181 LP05925 LP13345 RE06541 RE15885 RE28716 RE29843 RE32847 RE33395 RE39655 RE49045 RH04403 RH04433 RH04987 RH05453 RH05768 RH07537 RH08722
Other clones	14441 28354 55500 73048 104642 106032 123000 144705 144725 173767.1 289108 CK01.9D.E8 CK01.32B.D12 CK01.69B.B10 CK01.81B.H11 CK01.82D.A6 CK01.121D.F9 CK01144 Dmel_dig_006448_0708_0803 Dmel_dig_014175_0637_0469 Dmel_dig_016383_0641_1557 Dmel_dig_020699_0592_0747 Dmel_neb_012631_0631_3388 EC24436 EC33547 EK027846 EK038844 EK062732 EK065429 EK066135 EK093121 EK117233 EK136221 EK173018 EK182142 EK202039 EK250715 EK250723 EK274238 EN03309 EN04059 RP003001540 RP003001875 RP003002615 RP003003610 RP003004676 RP003005367 RP003006209 RP003006714 RP003007459 RP003008047 RP003009157 RP003011358 RP003011853 RP003012239 RP003013374 RP003014123 RP003014302 RP003014473 RP003015483 RP003015623 RP003015889 RP003017102 RP003018424 RP003018793 RP003019162 RP003021081 RP003022494 RP003022522 RP003023043 RP003023123 RP003023933 RP003025016 RP003026024 RP003026436 RP003027398 RP003028220 RP003028888 RP003029272 RP003029778 RP003029996 RP003030554 RP003030831 RP003031704 RP003033319 RP003034379 RP003035142 RP003036212 RP003036600 RP003039224 RP003040795 RP003043382 RP003043772 RP003043962 RP003043983 RP003044388 RP003051348 RP003053111 RP003053234 RP003053536 RP003055163 RP003055736 RP003056791 RP003057397 RP003058545 RP003058918 RP003060179 RP003061411 RP003061898 RP003061990 RP003064261 RP003066363 RP003066454 RP003066559 RP003066792 RP003067463 RP003067495 RP003068286 RP003069336 RP003069856 RP003070178 RP003071472 RP003072972 RP003073353 RP003075063 RP003076287 RP003076765 RP003078261 RP003078498 RP003079083 RP003079420 RP003079458 RP003080608 RP003082134 RP003082772 RP003083435 RP003083942 RP003084074 RP003084475 RP003084542 RP003084677 RP003085730 RP003085936 RP003086765 RP003087976 RP003089350 RP003090655 RP003091941 RP003092420 RP003092860 RP003092872 RP003094250 RP003095327 RP003095356 RP003096968 RP003097634 RP003097686 RP003100057 RP003101375 RP003101508 RP003102534 RP003102975 RP003105548 RP003106599 RP003108165 RP003108323 RP003110012 RP003110099 RP003110234 RP003110381 RP003113197 RP003114030 RP003114418 RP003117389 RP003119061 RP003119309 RP003120735 RP003120952 RP003121177 RP003121311 RP003121495 RP003122151 RP003123492 RP003123558 RP003124597 RP003125907 RP003126509 RP003127544 RP003129679 RP003131406 RP003131542 RP003131625 RP003131835 RP003133141 RP003133452 RP003135780 RP003136094 RP003136731 RP003136737 RP003136947 RP003137459 RP003137477 RP003138056 RP003138432 RP003138945 RP003140346 RP003140441 RP003140955 RP003141276 RP003141641 RP003142317 RP003142623 RP003143171 RP003147482 RP003148563 RP003149287 RP003150316 RP003151935 RP003152477 RP003153412 RP003153425 RP003155220 RP003156504 RP003156537 RP003156630 RP003156769 RP003158564 RP003159556 RP003160121 RP003161235 RP003162897 RP003163511 RP003163763 RP003165045 RP003166819 RP003168172 RP003168328 RP003168444 RP003168513 RP003169057 RP003169432 RP003170146 RP003171616 RP003171939 RP003172680 RP003172896 RP003173959 RP003174171 RP003174372 RP003174615 RP003175312 RP003176699 RP003178251 RP003178852 RP003179003 RP003179050 RP003180350 RP003181366 RP003184799 RP003187491 RP003187666 RP003188274 RP003188342 RP003188389 RP003189142 RP003189342 RP003189470 RP003190478 RP003190890 RP003192257 RP003192559 RP003192762 RP003194276 RP003194364 RP003194398 RP003194403 RP003194616 RP003194873 RP003195040 RP003195887 RP003196240 RP003196572 RP003197119 RP003197589 RP003199564 RP003200210 RP003200996 RP003203109 RP003203491 RP003204111 RP003205402 RP003205851 RP003206311 RP003206556 RP003206920 RP003207032 RP003207195 RP003209016 RP003209170 RP003210288 RP003210557 RP003211173 RP003211249 RP003212300 RP003213017 RP003213426 RP003214159 RP003214754 RP003215173 RP003215540 RP003216219 RP003216309 RP003217200 RP003217355 RP003218275 RP003219981 RP003220226 RP003221057 RP003221538 RP003221868 RP003222079 RP003222101 RP003222309 RP003222387 RP003222649 RP003223381 RP003223699 RP003223803 RP003224854 RP003226518 RP003226611 RP003227860 RP003228089 RP003230030 RP003230695 RP003231102 RP003231146 RP003231156 RP003231903 RP003232567 RP003233165 RP003233292 RP003233531 RP003233962 RP003234184 RP003234403 RP003234705 RP003234942 RP003235008 RP003235922 RP003236077 RP003236332 RP003237308 RP003238679 RP003239457 RP003240215 RP003240252 RP003240900 RP003241348 RP003242547 RP003243097 RP003243253 RP003245664 RP003247387 RP003249526 RP003249566 RP003249678 RP003249839 RP003249956 RP003250638 RP003252044 RP003253968 RP003254103 RP003254123 RP003254274 RP003256338 RP003256953 RP003258498 RP003260348 RP003260589 RP003261688 RP003262477 RP003262999 RP003263149 RP003264346 RP003267379 RP003267809 RP003267818 RP003268404 RP003268723 RP003269027 RP003270565 RP003270769 RP003272285 RP003272880 RP003273780 RP003274190 RP003274532 RP003275997 RP003276497 RP003279939 RP003280915 RP003282011 RP003282459 RP003282485 RP003282490 RP003283596 RP003284050 RP003286271 RP003286547 RP003286809 RP003288452 RP003289824 RP003290172 RP003290606 RP003290871 RP003291534 RP003292646 RP003292803 RP003293647 RP003293944 RP003294419 RP003294528 RP003295154 RP003297445 RP003298186 RP003298199 RP003299209 RP003300752 RP003300890 RP003301385 RP003305738 RP003305890 RP003306131 RP003309766 RP003310451 RP003310856 RP003311614 RP003311970 RP003312366 RP003312572 RP003313093 RP003313494 RP003316098 RP003316106 RP003316409 RP003318596 RP003319039 RP003319058 RP003319219 RP003320082 RP003320603 RP003322595 RP003323318 RP003323534 RP003324036 RP003325768 RP003326399 RP003326490 RP003327201 RP003328374 RP003329918 RP003330196 RP003331441 RP003333856 RP003335115 RP003336829 RP003337175 RP003337480 RP003338071 RP003338234 RP003339019 RP003339847 RP003342385 RP003342610 RP003342968 RP003343053 RP003343445 RP003343610 RP003343742 RP003347745 RP003350371 RP003350592 RP003352141 RP003352955 RP003354957 RP003355511 RP003355666 RP003355946 RP003358130 RP003359659 RP003360401 RP003362591 RP003365080 RP003365679 RP003366910 RP003368558 RP003370159 RP003370468 RP003371059 RP003371233 RP003372019 RP003372205 RP003373240 RP003375939 RP003376454 RP003377131 RP003377454 RP003377682 RP003377735 RP003378772 RP003379598 RP003379838 RP003381835 RP003382753 RP003382818 RP003383145 RP003383587 RP003386139 RP003386296 RP003386715 RP003387683 RP003387703 RP003388310 RP003388334 RP003389053 RP003389869 RP003390801 RP003392561 RP003394084 RP003394287 RP003394571 RP003395621 RP003395708 RP003396559 RP003397191 RP003398005 RP003398122 RP003399974 RP003401078 RP003401536 RP003401681 RP003403403 RP003404410 RP003405473 RP003406327 RP003406380 RP003406544 RP003406705 RP003407087 RP003408518 RP003409515 RP003409630 RP003409906 RP003410465 RP003411468 RP003411539 RP003411635 RP003412221 RP003412330 RP003412504 RP003413648 RP003414417 RP003415028 RP003415289 RP003416222 RP003416311 RP003416785 RP003417826 RP003418340 RP003419831 RP003420231 RP003421596 RP003421948 RP003422436 RP003423356 RP003424227 RP003424549 RP003424907 RP003425852 RP003425872 RP003426694 RP003426787 RP003429950 RP003430084 RP003431922 RP003433410 RP003435421 RP003435432 RP003436970 RP003436983 RP003437006 RP003437416 RP003438117 RP003438514 RP003439438 RP003439456 RP003439540 RP003441493 RP003442230 RP003442736 RP003443328 RP003443572 RP003443817 RP003444105 RP003445182 RP003446576 RP003449149 RP003449467 RP003450245 RP003451274 RP003452637 RP003453770 RP003455457 RP003457139 RP003457300 RP003459044 RP003459628 RP003460123 RP003461156 RP003461646 RP003462167 RP003462544 RP003464220 RP003464462 RP003465026 RP003466932 RP003467159 RP003469372 RP003470244 RP003470291 RP003471067 RP003471707 RP003473045 RP003473425 RP003473677 RP003474002 RP003474354 RP003474535 RP003474824 RP003477980 RP003478015 RP003478361 RP003478529 RP003478678 RP003478721 RP003480381 RP003480399 RP003480964 RP003480995 RP003481579 RP003481784 RP003481989 RP003482969 RP003482995 RP003483853 RP003484281 RP003484468 RP003485457 RP003485606 RP003486182 RP003486235 RP003487133 RP003487756 RP003488602 RP003488692 RP003489201 RP003489489 RP003489789 RP003490713 RP003490986 RP003491188 RP003492109 RP003492793 RP003492854 RP003495353 RP003498564 RP003499757 RP003500546 RP003503835 RP003505349 RP003505943 RP003507081 RP003507949 RP003508409 RP003509291 RP003510306 RP003510502 RP003512009 RP003513595 RP003513801 RP003513915 RP003514257 RP003515299 RP003519301 RP003519555 RP003520264 RP003520845 RP003521297 RP003521400 RP003522540 RP003523445 RP003523924 RP003525593 RP003526086 RP003529744 RP003530026 RP003530932 RP003534233 RP003534446 RP003534990 RP003535207 RP003536669 RP003536815 RP003537003 RP003537615 RP003538422 RP003540836 RP003540864 RP003540951 RP003540996 RP003541529 RP003542294 RP003543373 RP003546368 RP003547204 RP003547941 RP003549065 RP003550535 RP003550789 RP003552255 RP003552470 RP003553455 RP003553608 RP003553768 RP003553867 RP003554327 RP003555029 RP003555953 RP003557987 RP003560541 RP003561282 RP003562164 RP003562439 RP003563233 RP003564411 RP003564548 RP003564581 RP003565098 RP003565109 RP003565393 RP003568420 RP003570597 RP003571102 RP003572054 RP003572055 RP003573609 RP003573820 RP003573980 RP003574340 RP003574443 RP003575556 RP003575680 RP003576401 RP003576519 RP003577345 RP003579944 RP003580537 RP003580560 RP003580678 RP003580733 RP003581109 RP003581768 RP003581823 RP003581899 RP003584188 RP003584383 RP003584645 RP003585126 RP003586755 RP003587144 RP003587507 RP003588260 RP003588894 RP003591727 RP003592435 RP003593016 RP003593315 RP003594550 RP003594795 RP003595528 RP003595545 RP003596541 RP003596820 RP003601397 RP003603804 RP003604622 RP003607899 RP003608379 RP003611007 RP003613314 RP003615260 RP003615594 RP003617436 RP003617528 RP003618474 RP003618683 RP003619728 RP003619890 RP003620763 RP003620913 RP003621782 RP003622056 RP003623133 RP003623745 RP003624415 RP003624559 RP003625304 RP003625313 RP003625647 RP003627025 RP003627410 RP003628649 RP003628881 RP003633225 RP003636011 RP003636715 RP003639917 RP003640040 RP003641297 RP003641665 RP003645688 RP003645753 RP003648744 RP003649478 RP003649628 RP003649956 RP003650146 RP003650553 RP003650933 RP003651912 RP003652056 RP003653402 RP003653871 RP003654154 RP003654238 RP003654355 RP003655541 RP003656860 RP003657674 RP003659250 RP003663060 RP003663623 RP003666607 RP003670578 RP003671715 RP003671776 RP003671999 RP003672125 RP003677132 RP003677609 RP003677664 RP003680083 RP003680377 RP004166587
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0031969 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 34087
Antibody Information
Other Information
Discoverer
Etymology
	Gene is named "peste" on the basis of its role in bacterial infection. (Philips et al., 2005)
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: pes CG7228 (Philips et al., 2005)
Source for database merge of
Additional comments
Other Comments
	Identified in an RNAi screen for host factors that alter infection of SL2 cells by L.monocytogenes. (Agaisse et al., 2005)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_135324 NM_164777 NM_001144336 NM_001273290 RefSeq (Proteins) • NP_609168 NP_723328 NP_001137808 NP_001260219 DDBJ / EMBL / GenBank • AAF52584 AAL89869 AAN10649 ACL83014 AGB92755 AY084131 BI214924 CS133183 CZ473001 CZ474278 CZ474518 CZ486847 Entrez Gene - A searchable database of RefSeq genes. • 34087 UniProtKB/TrEMBL • B7Z031 Q8SXU4
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • CD36 antigen (IPR002159) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • RE21078
Linkouts
	BioGRID - A database of protein and genetic interactions • 60221 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0031969 DroID - A comprehensive database of gene and protein interactions. • FBgn0031969 DRSC - Results from RNAi screens. • FBgn0031969 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0031969 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG7228-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0031969 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 34087 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 34087 modMine - Data generated by the modENCODE project. • FBgn0031969
Synonyms & Secondary IDs ( 5 )
Reported As
Symbol Synonym	CG7228 (Philips et al., 2005, Agaisse et al., 2005, Bahcall, 2005, Lemaitre, 2000.12.20, Giot et al., 2003, Buszczak et al., 2007, Grieder et al., 2007, Cao et al., 2007, Li et al., 2009, Lebo et al., 2009, Carrera et al., 2008, Nichols and Vogt, 2008, Keleman et al., 2009.8.5, Montagne et al., 2010) Pes (Agaisse et al., 2005, Perrimon and Mathey-Prevot, 2007, Philips et al., 2008, Li et al., 2009) pes (Carrera et al., 2008, Nichols and Vogt, 2008, Sackton et al., 2007, Bushati et al., 2008, Japanese National Institute of Genetics, 2012.5.21)
Name Synonym	peste (Philips et al., 2005, Lebo et al., 2009, Nichols and Vogt, 2008, Sackton et al., 2007, Montagne et al., 2010, Vogt et al., 2009) Peste (Benton et al., 2007, Perrimon and Mathey-Prevot, 2007)
Secondary FlyBase IDs
References ( 38 )
Generate a list of	All references relating to this gene ( 38 )
List References by type	Research paper  ( 16 ) Supplementary material  ( 5 ) Review  ( 2 ) Personal communication to FlyBase  ( 10 ) FlyBase analysis  ( 2 ) Stock list  ( 1 ) Website  ( 1 ) Curated genome annotation  ( 1 )
Recent research papers ( 1 )
	Herboso et al., 2011, Int. J. Dev. Biol. 55(6): 603--611 Expression of the Scavenger Receptor Class B type I (SR-BI) family in Drosophila melanogaster. [FBrf0216272] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2011 Show reviews ...