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Gene Dmel\CG5168

General Information
Symbol	Dmel\CG5168	Species	D. melanogaster
Name		Annotation symbol	CG5168
Feature type	protein_coding_gene	FlyBase ID	FBgn0032246
Gene Model Status	Current	Stock availability	5 publicly available
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	31E1-31E1	Sequence location	2L:10,423,291..10,425,482 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG5168 (FBgn0032246). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: metal ion binding. The biological processes in which it is involved are not known. 7 alleles are reported. The phenotype of these alleles is annotated with: heart primordium. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: G-protein beta WD-40 repeat; WD40 repeat; WD40 repeat, conserved site; WD40-repeat-containing domain; WD40/YVTN repeat-like-containing domain; Zinc finger, FYVE-related; Zinc finger, FYVE-type; Zinc finger, FYVE/PHD-type; Zinc finger, RING/FYVE/PHD-type. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult fat body, adult testis, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1624406_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG5168. Gene sequence location is 2L:10423291..10425482.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 31E1-31E1   Limits computationally determined from genome sequence between P{lacW}RnrLk06709 and P{lacW}KdelRk00311
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG5168 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.46 Low-frequency RNA-Seq exon junction(s) not annotated.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG5168-RA FBtr0080020  NM_135556   1623   408 CG5168-RB FBtr0304117  NM_001201850   1584   408
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG5168-PA   FBpp0079610   46.2   408   7.40     NP_609400   AAF52946 CG5168-PB   FBpp0293060   46.2   408   7.40     NP_001188779   ADV37029
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, FYVE-type (IPR000306) WD40 repeat (IPR001680) Zinc finger, FYVE/PHD-type (IPR011011) WD40-repeat-containing domain (IPR017986) WD40/YVTN repeat-like-containing domain (IPR015943) Zinc finger, FYVE-related (IPR017455) WD40 repeat, conserved site (IPR019775) G-protein beta WD-40 repeat (IPR020472) Zinc finger, RING/FYVE/PHD-type (IPR013083)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA695946   AA802925   AE014134 AAF52946   AE014134 ADV37029   AI061997   AI108101   AI108175   AI238133   AI260342   AI295743   AI297454   AI297981   AI389151   AI402750   AI405654   AI516179   AI546402   AW943588   AY051942 AAK93366   BE978467   BE978899   BF487772   BF488228   BF494496   BF500969   BG636510   BI365298   BI632170   BI637353   CO156608   CO269414   CO279274   CO293295   CO328325   CO330490   CO337052   CO342315   CZ469578   CZ469639   EC072760   EC197295   EC212628   EC213783   EC247126   EC259441   EC261216   EC266064   EV582818   EV585277   GH750931   GH751774   GH754063   GH754939   GH760691   GH777787   GH780327   GH784555   GH784813   GH785692   GH786109   GH789877   GH790583   GH794726   GH801205   GH801434   GH804712   GH805239   GH806614   GH808737   GH808756   GH808802   GH812059   GH814888   GH818239   GH818442   GH822150   GH823774   GH825361   GH830455   GH832538   GH838483   GH839097   GH840458   GH849976   GH850721   GH851060   GH854298   GH858737   GH859640   GH868953   GH872707   GH876495   GH876555   GH882961   GH883264   GH885600   GH887104   GH888688   GH889281   GH892154   GH895719   GH895918   GH902422   GH902501   GH902939   GH904449   GH907875   GH909795   GH914272   GH917793   GH923342   GH925660   GH931042
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VKW1
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 11 -- 12   garland cell primordium   (Fisher et al., 2012) embryonic stage 13 -- 16   embryonic/larval garland cell   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval carcass. Expression at moderate levels in the following post-embryonic organs or tissues: adult fat body, adult testis, adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    768.5 Larval Midgut    1211 Larval Hindgut    1062.8 Larval Malpighian Tubules    1094.4 Larval Fat Body    712.8 Larval Salivary Gland    1027.1 Larval Trachea    1042.05 Larval Carcass    821.275 Adult Head    552.5 Adult Eye    828.75 Adult Brain    543 Adult Thoracic-Abdominal Ganglion    517.7 Adult Crop    581.9 Adult Midgut    762.8 Adult Hindgut    892.4 Adult Malpighian Tubules    563.1 Adult Fat Body    446.6 Adult Salivary Gland    583.2 Adult Heart    1268.6 Adult VirginFemale Spermatheca    915.5 Adult InseminatedFemale Spermatheca    977.4 Adult Ovary    742.7 Adult Testis    410.1 Adult Male Accessory Gland    1552.1 Adult Carcass    459.3 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  (768.5) Larval Midgut  (1211) Larval Hindgut  (1062.8) Larval Malpighian Tubules  (1094.4) Larval Fat Body  (712.8) Larval Salivary Gland  (1027.1) Larval Trachea  (1042.05) Larval Carcass  (821.275) Adult Head  (552.5) Adult Eye  (828.75) Adult Brain  (543) Adult Thoracic-Abdominal Ganglion  517.7 Adult Crop  (581.9) Adult Midgut  (762.8) Adult Hindgut  (892.4) Adult Malpighian Tubules  (563.1) Adult Fat Body    446.6 Adult Salivary Gland  (583.2) Adult Heart  (1268.6) Adult VirginFemale Spermatheca  (915.5) Adult InseminatedFemale Spermatheca  (977.4) Adult Ovary  (742.7) Adult Testis    410.1 Adult Male Accessory Gland  (1552.1) Adult Carcass    459.3 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    768.5 Larval Midgut  (1211) Larval Hindgut  1062.8 Larval Malpighian Tubules  (1094.4) Larval Fat Body    712.8 Larval Salivary Gland  1027.1 Larval Trachea  1042.05 Larval Carcass    821.275 Adult Head    552.5 Adult Eye    828.75 Adult Brain    543 Adult Thoracic-Abdominal Ganglion    517.7 Adult Crop    581.9 Adult Midgut    762.8 Adult Hindgut    892.4 Adult Malpighian Tubules    563.1 Adult Fat Body    446.6 Adult Salivary Gland    583.2 Adult Heart  (1268.6) Adult VirginFemale Spermatheca    915.5 Adult InseminatedFemale Spermatheca    977.4 Adult Ovary    742.7 Adult Testis    410.1 Adult Male Accessory Gland  (1552.1) Adult Carcass    459.3 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    768.5 Larval Midgut    1211 Larval Hindgut    1062.8 Larval Malpighian Tubules    1094.4 Larval Fat Body    712.8 Larval Salivary Gland    1027.1 Larval Trachea    1042.05 Larval Carcass    821.275 Adult Head    552.5 Adult Eye    828.75 Adult Brain    543 Adult Thoracic-Abdominal Ganglion    517.7 Adult Crop    581.9 Adult Midgut    762.8 Adult Hindgut    892.4 Adult Malpighian Tubules    563.1 Adult Fat Body    446.6 Adult Salivary Gland    583.2 Adult Heart    1268.6 Adult VirginFemale Spermatheca    915.5 Adult InseminatedFemale Spermatheca    977.4 Adult Ovary    742.7 Adult Testis    410.1 Adult Male Accessory Gland    1552.1 Adult Carcass    459.3 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    768.5 Larval Midgut    1211 Larval Hindgut    1062.8 Larval Malpighian Tubules    1094.4 Larval Fat Body    712.8 Larval Salivary Gland    1027.1 Larval Trachea    1042.05 Larval Carcass    821.275 Adult Head    552.5 Adult Eye    828.75 Adult Brain    543 Adult Thoracic-Abdominal Ganglion    517.7 Adult Crop    581.9 Adult Midgut    762.8 Adult Hindgut    892.4 Adult Malpighian Tubules    563.1 Adult Fat Body    446.6 Adult Salivary Gland    583.2 Adult Heart    1268.6 Adult VirginFemale Spermatheca    915.5 Adult InseminatedFemale Spermatheca    977.4 Adult Ovary    742.7 Adult Testis    410.1 Adult Male Accessory Gland    1552.1 Adult Carcass    459.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System  768.5 Larval Midgut  (1211) Larval Hindgut  (1062.8) Larval Malpighian Tubules  (1094.4) Larval Fat Body  712.8 Larval Salivary Gland  (1027.1) Larval Trachea  (1042.05) Larval Carcass  (821.275) Adult Head  552.5 Adult Eye  (828.75) Adult Brain  543 Adult Thoracic-Abdominal Ganglion  517.7 Adult Crop  581.9 Adult Midgut  762.8 Adult Hindgut  (892.4) Adult Malpighian Tubules  563.1 Adult Fat Body    446.6 Adult Salivary Gland  583.2 Adult Heart  (1268.6) Adult VirginFemale Spermatheca  (915.5) Adult InseminatedFemale Spermatheca  (977.4) Adult Ovary  742.7 Adult Testis    410.1 Adult Male Accessory Gland  (1552.1) Adult Carcass    459.3 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    768.5 Larval Midgut  1211 Larval Hindgut  1062.8 Larval Malpighian Tubules  1094.4 Larval Fat Body    712.8 Larval Salivary Gland  1027.1 Larval Trachea  1042.05 Larval Carcass    821.275 Adult Head    552.5 Adult Eye    828.75 Adult Brain    543 Adult Thoracic-Abdominal Ganglion    517.7 Adult Crop    581.9 Adult Midgut    762.8 Adult Hindgut    892.4 Adult Malpighian Tubules    563.1 Adult Fat Body    446.6 Adult Salivary Gland    583.2 Adult Heart  1268.6 Adult VirginFemale Spermatheca    915.5 Adult InseminatedFemale Spermatheca    977.4 Adult Ovary    742.7 Adult Testis    410.1 Adult Male Accessory Gland  1552.1 Adult Carcass    459.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    768.5 Larval Midgut    1211 Larval Hindgut    1062.8 Larval Malpighian Tubules    1094.4 Larval Fat Body    712.8 Larval Salivary Gland    1027.1 Larval Trachea    1042.05 Larval Carcass    821.275 Adult Head    552.5 Adult Eye    828.75 Adult Brain    543 Adult Thoracic-Abdominal Ganglion    517.7 Adult Crop    581.9 Adult Midgut    762.8 Adult Hindgut    892.4 Adult Malpighian Tubules    563.1 Adult Fat Body    446.6 Adult Salivary Gland    583.2 Adult Heart    1268.6 Adult VirginFemale Spermatheca    915.5 Adult InseminatedFemale Spermatheca    977.4 Adult Ovary    742.7 Adult Testis    410.1 Adult Male Accessory Gland    1552.1 Adult Carcass    459.3 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    552.5   NA  Eye    828.75   NA  Brain    543   768.5  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    517.7   NA  Crop    581.9   1211  Midgut    762.8   1062.8  Hindgut    892.4   1094.4  Malpighian Tubules    563.1   712.8  Fat Body    446.6   1027.1  Salivary Gland    583.2   NA  Heart    1268.6   1042.05  Trachea    NA   NA  VirginFemale Spermatheca    915.5   NA  InseminatedFemale Spermatheca    977.4   NA  Ovary    742.7   NA  Testis    410.1   NA  Male Accessory Gland    1552.1   821.275  Carcass    459.3 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    34 central nervous system, larvae L3    33 central nervous system, pupae P8    19 head, virgin 1-day female    11 head, virgin 4-day female    14 head, virgin 20-day female    15 head, mated 1-day female    11 head, mated 4-day female    12 head, mated 20-day female    14 head, mated 1-day male    15 head, mated 4-day male    17 head, mated 20-day male    23 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    14 digestive system, larvae L3 wandering    53 digestive system, 1-day adult    18 digestive system, 4-day adult    15 digestive system, 20-day adult    15 fat body, larvae L3 wandering    9 fat body, white prepupae    20 fat body, pupae P8    32 carcass, larvae L3 wandering    38 carcass, 1-day adult    9 carcass, 4-day adult    10 carcass, 20-day adult    15 ovary, virgin 4-day female    36 ovary, mated 4-day female    30 testis, mated 4-day male    40 accessory gland, mated 4-day male    26 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (34) central nervous system, larvae L3  (33) central nervous system, pupae P8    19 head, virgin 1-day female    11 head, virgin 4-day female    14 head, virgin 20-day female    15 head, mated 1-day female    11 head, mated 4-day female    12 head, mated 20-day female    14 head, mated 1-day male    15 head, mated 4-day male    17 head, mated 20-day male    23 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    14 digestive system, larvae L3 wandering  (53) digestive system, 1-day adult    18 digestive system, 4-day adult    15 digestive system, 20-day adult    15 fat body, larvae L3 wandering    9 fat body, white prepupae    20 fat body, pupae P8  (32) carcass, larvae L3 wandering  (38) carcass, 1-day adult    9 carcass, 4-day adult    10 carcass, 20-day adult    15 ovary, virgin 4-day female  (36) ovary, mated 4-day female  (30) testis, mated 4-day male  (40) accessory gland, mated 4-day male  26 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    34 central nervous system, larvae L3    33 central nervous system, pupae P8    19 head, virgin 1-day female    11 head, virgin 4-day female    14 head, virgin 20-day female    15 head, mated 1-day female    11 head, mated 4-day female    12 head, mated 20-day female    14 head, mated 1-day male    15 head, mated 4-day male    17 head, mated 20-day male    23 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    14 digestive system, larvae L3 wandering    53 digestive system, 1-day adult    18 digestive system, 4-day adult    15 digestive system, 20-day adult    15 fat body, larvae L3 wandering    9 fat body, white prepupae    20 fat body, pupae P8    32 carcass, larvae L3 wandering    38 carcass, 1-day adult    9 carcass, 4-day adult    10 carcass, 20-day adult    15 ovary, virgin 4-day female    36 ovary, mated 4-day female    30 testis, mated 4-day male    40 accessory gland, mated 4-day male    26 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    34 central nervous system, larvae L3    33 central nervous system, pupae P8    19 head, virgin 1-day female    11 head, virgin 4-day female    14 head, virgin 20-day female    15 head, mated 1-day female    11 head, mated 4-day female    12 head, mated 20-day female    14 head, mated 1-day male    15 head, mated 4-day male    17 head, mated 20-day male    23 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    14 digestive system, larvae L3 wandering    53 digestive system, 1-day adult    18 digestive system, 4-day adult    15 digestive system, 20-day adult    15 fat body, larvae L3 wandering    9 fat body, white prepupae    20 fat body, pupae P8    32 carcass, larvae L3 wandering    38 carcass, 1-day adult    9 carcass, 4-day adult    10 carcass, 20-day adult    15 ovary, virgin 4-day female    36 ovary, mated 4-day female    30 testis, mated 4-day male    40 accessory gland, mated 4-day male    26 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    34 central nervous system, larvae L3    33 central nervous system, pupae P8    19 head, virgin 1-day female    11 head, virgin 4-day female    14 head, virgin 20-day female    15 head, mated 1-day female    11 head, mated 4-day female    12 head, mated 20-day female    14 head, mated 1-day male    15 head, mated 4-day male    17 head, mated 20-day male    23 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    14 digestive system, larvae L3 wandering    53 digestive system, 1-day adult    18 digestive system, 4-day adult    15 digestive system, 20-day adult    15 fat body, larvae L3 wandering    9 fat body, white prepupae    20 fat body, pupae P8    32 carcass, larvae L3 wandering    38 carcass, 1-day adult    9 carcass, 4-day adult    10 carcass, 20-day adult    15 ovary, virgin 4-day female    36 ovary, mated 4-day female    30 testis, mated 4-day male    40 accessory gland, mated 4-day male    26 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (34) central nervous system, larvae L3  (33) central nervous system, pupae P8    19 head, virgin 1-day female    11 head, virgin 4-day female    14 head, virgin 20-day female    15 head, mated 1-day female    11 head, mated 4-day female    12 head, mated 20-day female    14 head, mated 1-day male    15 head, mated 4-day male    17 head, mated 20-day male    23 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    14 digestive system, larvae L3 wandering  (53) digestive system, 1-day adult    18 digestive system, 4-day adult    15 digestive system, 20-day adult    15 fat body, larvae L3 wandering    9 fat body, white prepupae    20 fat body, pupae P8  32 carcass, larvae L3 wandering  (38) carcass, 1-day adult    9 carcass, 4-day adult    10 carcass, 20-day adult    15 ovary, virgin 4-day female  (36) ovary, mated 4-day female  30 testis, mated 4-day male  (40) accessory gland, mated 4-day male  26 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    34 central nervous system, larvae L3    33 central nervous system, pupae P8    19 head, virgin 1-day female    11 head, virgin 4-day female    14 head, virgin 20-day female    15 head, mated 1-day female    11 head, mated 4-day female    12 head, mated 20-day female    14 head, mated 1-day male    15 head, mated 4-day male    17 head, mated 20-day male    23 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    14 digestive system, larvae L3 wandering    53 digestive system, 1-day adult    18 digestive system, 4-day adult    15 digestive system, 20-day adult    15 fat body, larvae L3 wandering    9 fat body, white prepupae    20 fat body, pupae P8    32 carcass, larvae L3 wandering    38 carcass, 1-day adult    9 carcass, 4-day adult    10 carcass, 20-day adult    15 ovary, virgin 4-day female    36 ovary, mated 4-day female    30 testis, mated 4-day male    40 accessory gland, mated 4-day male    26 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    34 central nervous system, larvae L3    33 central nervous system, pupae P8    19 head, virgin 1-day female    11 head, virgin 4-day female    14 head, virgin 20-day female    15 head, mated 1-day female    11 head, mated 4-day female    12 head, mated 20-day female    14 head, mated 1-day male    15 head, mated 4-day male    17 head, mated 20-day male    23 salivary gland, larvae L3 wandering    16 salivary gland, white prepupae    14 digestive system, larvae L3 wandering    53 digestive system, 1-day adult    18 digestive system, 4-day adult    15 digestive system, 20-day adult    15 fat body, larvae L3 wandering    9 fat body, white prepupae    20 fat body, pupae P8    32 carcass, larvae L3 wandering    38 carcass, 1-day adult    9 carcass, 4-day adult    10 carcass, 20-day adult    15 ovary, virgin 4-day female    36 ovary, mated 4-day female    30 testis, mated 4-day male    40 accessory gland, mated 4-day male    26 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    65 embryo 02-04hr    20 embryo 04-06hr    25 embryo 06-08hr    22 embryo 08-10hr    37 embryo 10-12hr    63 embryo 12-14hr    55 embryo 14-16hr    41 embryo 16-18hr    31 embryo 18-20hr    24 embryo 20-22hr    20 embryo 22-24hr    25 larva L1    33 larva L2    40 larva L3 12hr old    37 larva L3 puffstage 1-2    69 larva L3 puffstage 3-6    79 larva L3 puffstage 7-9    96 white prepupae new    81 white prepupae 12hr    83 white prepupae 24hr    84 pupae 2d postWPP    56 pupae 3d postWPP    34 pupae 4d postWPP    27 adult male 01day    38 adult male 05day    45 adult male 30day    49 adult female 01day    47 adult female 05day    65 adult female 30day    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (65) embryo 02-04hr    20 embryo 04-06hr    25 embryo 06-08hr    22 embryo 08-10hr  (37) embryo 10-12hr  (63) embryo 12-14hr  (55) embryo 14-16hr  (41) embryo 16-18hr  (31) embryo 18-20hr    24 embryo 20-22hr    20 embryo 22-24hr    25 larva L1  (33) larva L2  (40) larva L3 12hr old  (37) larva L3 puffstage 1-2  (69) larva L3 puffstage 3-6  (79) larva L3 puffstage 7-9  (96) white prepupae new  (81) white prepupae 12hr  (83) white prepupae 24hr  (84) pupae 2d postWPP  (56) pupae 3d postWPP  (34) pupae 4d postWPP  (27) adult male 01day  (38) adult male 05day  (45) adult male 30day  (49) adult female 01day  (47) adult female 05day  (65) adult female 30day  (67) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    65 embryo 02-04hr    20 embryo 04-06hr    25 embryo 06-08hr    22 embryo 08-10hr    37 embryo 10-12hr    63 embryo 12-14hr    55 embryo 14-16hr    41 embryo 16-18hr    31 embryo 18-20hr    24 embryo 20-22hr    20 embryo 22-24hr    25 larva L1    33 larva L2    40 larva L3 12hr old    37 larva L3 puffstage 1-2    69 larva L3 puffstage 3-6    79 larva L3 puffstage 7-9    96 white prepupae new    81 white prepupae 12hr    83 white prepupae 24hr    84 pupae 2d postWPP    56 pupae 3d postWPP    34 pupae 4d postWPP    27 adult male 01day    38 adult male 05day    45 adult male 30day    49 adult female 01day    47 adult female 05day    65 adult female 30day    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    65 embryo 02-04hr    20 embryo 04-06hr    25 embryo 06-08hr    22 embryo 08-10hr    37 embryo 10-12hr    63 embryo 12-14hr    55 embryo 14-16hr    41 embryo 16-18hr    31 embryo 18-20hr    24 embryo 20-22hr    20 embryo 22-24hr    25 larva L1    33 larva L2    40 larva L3 12hr old    37 larva L3 puffstage 1-2    69 larva L3 puffstage 3-6    79 larva L3 puffstage 7-9    96 white prepupae new    81 white prepupae 12hr    83 white prepupae 24hr    84 pupae 2d postWPP    56 pupae 3d postWPP    34 pupae 4d postWPP    27 adult male 01day    38 adult male 05day    45 adult male 30day    49 adult female 01day    47 adult female 05day    65 adult female 30day    67 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    65 embryo 02-04hr    20 embryo 04-06hr    25 embryo 06-08hr    22 embryo 08-10hr    37 embryo 10-12hr    63 embryo 12-14hr    55 embryo 14-16hr    41 embryo 16-18hr    31 embryo 18-20hr    24 embryo 20-22hr    20 embryo 22-24hr    25 larva L1    33 larva L2    40 larva L3 12hr old    37 larva L3 puffstage 1-2    69 larva L3 puffstage 3-6    79 larva L3 puffstage 7-9    96 white prepupae new    81 white prepupae 12hr    83 white prepupae 24hr    84 pupae 2d postWPP    56 pupae 3d postWPP    34 pupae 4d postWPP    27 adult male 01day    38 adult male 05day    45 adult male 30day    49 adult female 01day    47 adult female 05day    65 adult female 30day    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (65) embryo 02-04hr    20 embryo 04-06hr    25 embryo 06-08hr    22 embryo 08-10hr  (37) embryo 10-12hr  (63) embryo 12-14hr  (55) embryo 14-16hr  (41) embryo 16-18hr  31 embryo 18-20hr    24 embryo 20-22hr    20 embryo 22-24hr    25 larva L1  (33) larva L2  (40) larva L3 12hr old  (37) larva L3 puffstage 1-2  (69) larva L3 puffstage 3-6  (79) larva L3 puffstage 7-9  (96) white prepupae new  (81) white prepupae 12hr  (83) white prepupae 24hr  (84) pupae 2d postWPP  (56) pupae 3d postWPP  (34) pupae 4d postWPP  27 adult male 01day  (38) adult male 05day  (45) adult male 30day  (49) adult female 01day  (47) adult female 05day  (65) adult female 30day  (67) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    65 embryo 02-04hr    20 embryo 04-06hr    25 embryo 06-08hr    22 embryo 08-10hr    37 embryo 10-12hr    63 embryo 12-14hr    55 embryo 14-16hr    41 embryo 16-18hr    31 embryo 18-20hr    24 embryo 20-22hr    20 embryo 22-24hr    25 larva L1    33 larva L2    40 larva L3 12hr old    37 larva L3 puffstage 1-2    69 larva L3 puffstage 3-6    79 larva L3 puffstage 7-9    96 white prepupae new    81 white prepupae 12hr    83 white prepupae 24hr    84 pupae 2d postWPP    56 pupae 3d postWPP    34 pupae 4d postWPP    27 adult male 01day    38 adult male 05day    45 adult male 30day    49 adult female 01day    47 adult female 05day    65 adult female 30day    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    65 embryo 02-04hr    20 embryo 04-06hr    25 embryo 06-08hr    22 embryo 08-10hr    37 embryo 10-12hr    63 embryo 12-14hr    55 embryo 14-16hr    41 embryo 16-18hr    31 embryo 18-20hr    24 embryo 20-22hr    20 embryo 22-24hr    25 larva L1    33 larva L2    40 larva L3 12hr old    37 larva L3 puffstage 1-2    69 larva L3 puffstage 3-6    79 larva L3 puffstage 7-9    96 white prepupae new    81 white prepupae 12hr    83 white prepupae 24hr    84 pupae 2d postWPP    56 pupae 3d postWPP    34 pupae 4d postWPP    27 adult male 01day    38 adult male 05day    45 adult male 30day    49 adult female 01day    47 adult female 05day    65 adult female 30day    67 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    106 Schneider line 2 Sg4    90 embryonic 1182-4H    65 embryonic GM2    79 embryonic Kc167    48 embryonic S1    111 embryonic S3    53 leg disc CME L1    82 wing disc CME-W2    86 wing disc ML-DmD8    53 wing disc ML-DmD9    64 wing disc ML-DmD16-c3    63 wing disc ML-DmD21    70 wing disc ML-DmD32    52 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    52 antennal disc ML-DmD20-c5    59 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    54 CNS ML-DmBG2-c2    75 tumorous blood cells mbn2    89 ovary fGS/OSS    36 ovary OSC    26 ovary OSS    20 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (106) Schneider line 2 Sg4  (90) embryonic 1182-4H  (65) embryonic GM2  (79) embryonic Kc167  (48) embryonic S1  (111) embryonic S3  (53) leg disc CME L1  (82) wing disc CME-W2  (86) wing disc ML-DmD8  (53) wing disc ML-DmD9  (64) wing disc ML-DmD16-c3  (63) wing disc ML-DmD21  (70) wing disc ML-DmD32  (52) haltere disc ML-DmD17-c3  (53) eye-antennal disc ML-DmD11  (52) antennal disc ML-DmD20-c5  (59) mixed discs ML-DmD4-c1  (58) CNS ML-DmBG1-c1  (54) CNS ML-DmBG2-c2  (75) tumorous blood cells mbn2  (89) ovary fGS/OSS  (36) ovary OSC  26 ovary OSS    20 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  106 Schneider line 2 Sg4    90 embryonic 1182-4H    65 embryonic GM2    79 embryonic Kc167    48 embryonic S1  (111) embryonic S3    53 leg disc CME L1    82 wing disc CME-W2    86 wing disc ML-DmD8    53 wing disc ML-DmD9    64 wing disc ML-DmD16-c3    63 wing disc ML-DmD21    70 wing disc ML-DmD32    52 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    52 antennal disc ML-DmD20-c5    59 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    54 CNS ML-DmBG2-c2    75 tumorous blood cells mbn2    89 ovary fGS/OSS    36 ovary OSC    26 ovary OSS    20 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    106 Schneider line 2 Sg4    90 embryonic 1182-4H    65 embryonic GM2    79 embryonic Kc167    48 embryonic S1    111 embryonic S3    53 leg disc CME L1    82 wing disc CME-W2    86 wing disc ML-DmD8    53 wing disc ML-DmD9    64 wing disc ML-DmD16-c3    63 wing disc ML-DmD21    70 wing disc ML-DmD32    52 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    52 antennal disc ML-DmD20-c5    59 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    54 CNS ML-DmBG2-c2    75 tumorous blood cells mbn2    89 ovary fGS/OSS    36 ovary OSC    26 ovary OSS    20 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    106 Schneider line 2 Sg4    90 embryonic 1182-4H    65 embryonic GM2    79 embryonic Kc167    48 embryonic S1    111 embryonic S3    53 leg disc CME L1    82 wing disc CME-W2    86 wing disc ML-DmD8    53 wing disc ML-DmD9    64 wing disc ML-DmD16-c3    63 wing disc ML-DmD21    70 wing disc ML-DmD32    52 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    52 antennal disc ML-DmD20-c5    59 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    54 CNS ML-DmBG2-c2    75 tumorous blood cells mbn2    89 ovary fGS/OSS    36 ovary OSC    26 ovary OSS    20 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (106) Schneider line 2 Sg4  (90) embryonic 1182-4H  (65) embryonic GM2  (79) embryonic Kc167  (48) embryonic S1  (111) embryonic S3  (53) leg disc CME L1  (82) wing disc CME-W2  (86) wing disc ML-DmD8  (53) wing disc ML-DmD9  (64) wing disc ML-DmD16-c3  (63) wing disc ML-DmD21  (70) wing disc ML-DmD32  (52) haltere disc ML-DmD17-c3  (53) eye-antennal disc ML-DmD11  (52) antennal disc ML-DmD20-c5  (59) mixed discs ML-DmD4-c1  (58) CNS ML-DmBG1-c1  (54) CNS ML-DmBG2-c2  (75) tumorous blood cells mbn2  (89) ovary fGS/OSS  (36) ovary OSC  26 ovary OSS    20 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  106 Schneider line 2 Sg4    90 embryonic 1182-4H    65 embryonic GM2    79 embryonic Kc167    48 embryonic S1  111 embryonic S3    53 leg disc CME L1    82 wing disc CME-W2    86 wing disc ML-DmD8    53 wing disc ML-DmD9    64 wing disc ML-DmD16-c3    63 wing disc ML-DmD21    70 wing disc ML-DmD32    52 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    52 antennal disc ML-DmD20-c5    59 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    54 CNS ML-DmBG2-c2    75 tumorous blood cells mbn2    89 ovary fGS/OSS    36 ovary OSC    26 ovary OSS    20 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    106 Schneider line 2 Sg4    90 embryonic 1182-4H    65 embryonic GM2    79 embryonic Kc167    48 embryonic S1    111 embryonic S3    53 leg disc CME L1    82 wing disc CME-W2    86 wing disc ML-DmD8    53 wing disc ML-DmD9    64 wing disc ML-DmD16-c3    63 wing disc ML-DmD21    70 wing disc ML-DmD32    52 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    52 antennal disc ML-DmD20-c5    59 mixed discs ML-DmD4-c1    58 CNS ML-DmBG1-c1    54 CNS ML-DmBG2-c2    75 tumorous blood cells mbn2    89 ovary fGS/OSS    36 ovary OSC    26 ovary OSS    20 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    10 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    34 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult    34 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    14 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    44 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    40 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    29 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    10 heat shock, 4-day adult  26 Cadmium 50 mM 6 hrs, larvae L3  (34) Cadmium 50 mM 12 hrs, larvae L3  (46) Cadmium 50 mM 48 hrs, 4-day adult  (34) Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    14 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3  (34) Ethanol 5% 3 hrs, larvae L3  (44) Ethanol 10% 3 hrs, larvae L3  (31) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (40) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (28) Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult  (29) Paraquat 10 mM 48 hrs, 4-day adult  (33) Rotenone 2 μg 12 hrs, larvae L3  (41) Rotenone 8 μg 12 hrs, larvae L3  (29) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    10 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    34 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult    34 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    14 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    44 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    40 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    29 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    10 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    34 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult    34 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    14 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    44 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    40 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    29 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    10 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    34 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult    34 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    14 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    44 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    40 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    29 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    10 heat shock, 4-day adult  26 Cadmium 50 mM 6 hrs, larvae L3  (34) Cadmium 50 mM 12 hrs, larvae L3  (46) Cadmium 50 mM 48 hrs, 4-day adult  (34) Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    14 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3  (34) Ethanol 5% 3 hrs, larvae L3  (44) Ethanol 10% 3 hrs, larvae L3  31 Caffeine 1.5 mg/ml 4 hrs, larvae L3  (40) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  28 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult  29 Paraquat 10 mM 48 hrs, 4-day adult  (33) Rotenone 2 μg 12 hrs, larvae L3  (41) Rotenone 8 μg 12 hrs, larvae L3  29 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    10 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    34 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult    34 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    14 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    44 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    40 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    29 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    10 cold shock, 4-day adult    10 heat shock, 4-day adult    26 Cadmium 50 mM 6 hrs, larvae L3    34 Cadmium 50 mM 12 hrs, larvae L3    46 Cadmium 50 mM 48 hrs, 4-day adult    34 Cadmium 100 mM 48 hrs, 4-day adult    25 Copper 0.5 mM 12 hrs, larvae L3    12 Copper 15 mM 48 hrs, 4-day adult    14 Zinc 5 mM 12 hrs, larvae L3    13 Zinc 4.5 mM 48 hrs, 4-day adult    18 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    44 Ethanol 10% 3 hrs, larvae L3    31 Caffeine 1.5 mg/ml 4 hrs, larvae L3    40 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    9 Paraquat 5 mM 48 hrs, 4-day adult    29 Paraquat 10 mM 48 hrs, 4-day adult    33 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    29 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_23 mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	BDGP expression data • LD41958 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0032246 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5168-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG5168 Stages(s) 1-3 Stages(s) 7-8 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG5168GD11563 Phenotype manifest in Allele heart primordium CG5168dsRNA.cKa CG5168dsRNA.si.cKa
Classical Alleles ( 2 )
For All Classical Alleles Show
Allele of CG5168 Class Mutagen Stocks Known lesion CG5168c04880 piggyBac transposase 2 -- CG5168c04956 piggyBac transposase 1 --
Alleles Carried on Transgenic Constructs ( 5 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG5168 Class Mutagen Stocks Known lesion CG5168GD11563 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG5168dsRNA.cKa in vitro construct - RNAi 0 Yes CG5168dsRNA.si.cKa in vitro construct - RNAi 0 Yes CG5168KK101897 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes CG5168NIG.5168R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD11563} NA P{KK101897} NA P{NIG.5168R} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{PB}CG5168c04880 NA PBac{PB}CG5168c04956 NA
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function
CV term Evidence References
metal ion binding inferred from electronic annotation with InterPro:IPR000306 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG5168 - Aats-his anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG5168 - Ama anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) CG5168 - CG6321 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG5168 - Tsp29Fb anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG5168 - tyn anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG5168 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 60506 DroID - A comprehensive database of gene and protein interactions. • FBgn0032246 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 34425 SignaLink - A protein-protein and protein-miRNA interaction database with multi-layered structure and multiple confidence scores. • Q9VKW1
Orthologs
OrthoDB Orthologs (44) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG63JCQG Dipteran inclusive ortholog search EOG6P8FSK Insect inclusive ortholog search EOG6GF29H Arthropod inclusive ortholog search EOG66T1GT Metazoa inclusive ortholog search EOG6DVJDN
Orthologs in Drosophila Species (EOG63JCQG)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG5168     Drosophila simulans   Dsim\GD23699 Y   Drosophila sechellia   Dsec\GM18372 Y   Drosophila erecta   Dere\GG10130 Y   Drosophila yakuba   Dyak\GE18942 Y   Drosophila ananassae   Dana\GF15787 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA18706 Y   Drosophila persimilis   Dper\GL18988 Y   Drosophila willistoni   Dwil\GK15257 Y   Drosophila virilis   Dvir\GJ13775 Y   Drosophila mojavensis   Dmoj\GI20433 Y   Drosophila grimshawi   Dgri\GH13608 Y
Orthologs in non-Drosophila Dipterans (EOG6P8FSK)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL001212   Anopheles gambiae Malaria mosquito  Agam\AGAP008932   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ004178   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ004179
Orthologs in non-Dipteran Insects (EOG6GF29H)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\LOC410098   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG019941   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH20671   Atta cephalotes Leafcutter ant  Acep\ACEP17164   Camponotus floridanus Florida carpenter ant  Cflo\CFLO19647   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL14355   Linepithema humile Argentine ant  Lhum\LH20413   Pogonomyrmex barbatus Red harvester ant  Pbar\PB18378   Solenopsis invicta Red fire ant  Sinv\SINV15852   Acyrthosiphon pisum Pea aphid  Apim\ACYPI002310   Bombyx mori Silkmoth  Bmor\BGIBMGA003042   Pediculus humanus Human body louse  Phum\PHUM462740   Tribolium castaneum Red flour beetle  Tcas\TC013032
Orthologs in non-Insect Arthropods (EOG66T1GT)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\ND1   Ixodes scapularis Deer tick  Isca\ISCW004267
Orthologs in non-Arthropod Metazoa (EOG6DVJDN)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\wdfy-2   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_013913gn   Danio rerio Zebrafish  Drer\wdfy1   Danio rerio Zebrafish  Drer\wdfy2   Xenopus tropicalis Western clawed frog  Xtro\wdfy2   Xenopus tropicalis Western clawed frog  Xtro\wdfy1   Gallus gallus Domestic chicken  Ggal\WDFY2   Gallus gallus Domestic chicken  Ggal\WDFY1   Mus musculus House mouse  Mmus\Wdfy2   Rattus norvegicus Norway rat  Rnor\Wdfy2   Rattus norvegicus Norway rat  Rnor\Wdfy1   Homo sapiens Human  Hsap\WDFY1   Homo sapiens Human  Hsap\WDFY2
Human Orthologs (2)
Gene OMIM HGNC Hsap\WDFY1     Hsap\WDFY2
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD23699 Drosophila sechellia Dsec\GM18372 Drosophila erecta Dere\GG10130 Drosophila yakuba Dyak\GE18942 Drosophila ananassae Dana\GF15787 Drosophila pseudoobscura pseudoobscura Dpse\GA18706 Drosophila persimilis Dper\GL18988 Drosophila willistoni Dwil\GK15257 Drosophila virilis Dvir\GJ13775 Drosophila mojavensis Dmoj\GI20433 Drosophila grimshawi Dgri\GH13608
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
Bloomington	16990 w1118; PBac{PB}CG5168c04880
Harvard	- PBac{PB}CG5168c04880 - PBac{PB}CG5168c04956
VDRC	v22022 w1118 P{GD11563}v22022 v22021 w1118; P{GD11563}v22021
Genomic Clones ( 2 )
	BACR34C10 BACR48K04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 107 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD41958
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT03133 AT16140 AT22825 AT23445 GH01032 GH06843 GH06943 GH14133 GH20251 GH22038 GH25735 GM04816 GM06577 LD47965 LP04143 LP09459 LP11753 LP12476 RE50561 SD14241 SD19339 SD25788
Other clones	20200 73304 74368 104288 295478 297087 bs80b06 bs84b12 CK01.124A.D10 Dmel_dig_005157_0714_1354 Dmel_dig_008701_0713_2803 EC254484 EK094445 EK133935 EK202510 EK295406 EN08410 EN13730 EP09007 EP14460 RP003005889 RP003023303 RP003031814 RP003047891 RP003054202 RP003058018 RP003062263 RP003066169 RP003066532 RP003074556 RP003090751 RP003100989 RP003109073 RP003115270 RP003124235 RP003134506 RP003142001 RP003159300 RP003160566 RP003189895 RP003200363 RP003204425 RP003206040 RP003219550 RP003220766 RP003252864 RP003257647 RP003269472 RP003269594 RP003277417 RP003293712 RP003294854 RP003338476 RP003345140 RP003349425 RP003356598 RP003370006 RP003375457 RP003385259 RP003388287 RP003390700 RP003398294 RP003407289 RP003419072 RP003444985 RP003462772 RP003465777 RP003471236 RP003491236 RP003499346 RP003501113 RP003514604 RP003515860 RP003532214 RP003549237 RP003551673 RP003553188 RP003598129 RP003644240 RP003648423 RP003651169 RP003660366 RP003672022 RP003681761
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0032246 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 34425
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_135556 NM_001201850 RefSeq (Proteins) • NP_609400 NP_001188779 DDBJ / EMBL / GenBank • AAF52946 AAK93366 ADV37029 AI516179 AW943588 AY051942 CZ469578 CZ469639 Entrez Gene - A searchable database of RefSeq genes. • 34425 UniProtKB/TrEMBL • Q9VKW1
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Zinc finger, FYVE-type (IPR000306) WD40 repeat (IPR001680) Zinc finger, FYVE/PHD-type (IPR011011) WD40-repeat-containing domain (IPR017986) WD40/YVTN repeat-like-containing domain (IPR015943) Zinc finger, FYVE-related (IPR017455) WD40 repeat, conserved site (IPR019775) G-protein beta WD-40 repeat (IPR020472) Zinc finger, RING/FYVE/PHD-type (IPR013083) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LD41958
Linkouts
	BioGRID - A database of protein and genetic interactions • 60506 DroID - A comprehensive database of gene and protein interactions. • FBgn0032246 DRSC - Results from RNAi screens. • FBgn0032246 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0032246 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5168-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0032246 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 34425 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 34425 modMine - Data generated by the modENCODE project. • FBgn0032246 SignaLink - A protein-protein and protein-miRNA interaction database with multi-layered structure and multiple confidence scores. • Q9VKW1
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG5168 (Izutsu et al., 2012, Stuart et al., 2007, Keleman et al., 2009.8.5, Japanese National Institute of Genetics, 2012.5.21)
Name Synonym
Secondary FlyBase IDs
References ( 20 )
Research paper	Izutsu et al., 2012, PLoS ONE 7(3): e33288 Genome features of "dark-fly", a Drosophila line reared long-term in a dark environment. [FBrf0217825] Stuart et al., 2007, Nature 445(7123): 95--101 A systems biology analysis of the Drosophila phagosome. [FBrf0195342] Kim et al., 2004, Proc. Natl. Acad. Sci. U.S.A. 101(1): 159--164 A functional genomic screen for cardiogenic genes using RNA interference in developing Drosophila embryos. [FBrf0168010]
Supplementary material	Graveley et al., 2011, Nature 471(7339): Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980] Guruharsha et al., 2011, Cell 147(3): Table S3. [FBrf0218395] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Mintseris et al., 2009.11.23, DPiM: the Drosophila Protein Interaction Mapping project DPiM: the Drosophila Protein Interaction Mapping project [FBrf0209452] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. (Computer file) Genomic mapping of Exelixis insertion collection. (Computer file) [FBrf0184340] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Gene Disruption Project members, 2001-, (Computer file) (Computer file) [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file) Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
FlyBase analysis	FlyBase, 1992-, FlyBase curation. FlyBase curation. [FBrf0105495]
Stock list	Japanese National Institute of Genetics, 2012.5.21, RNAi stocks available from NIG-FLY. RNAi stocks available from NIG-FLY. [FBrf0218457]
Website	Fisher et al., 2012, BDGP insitu homepage BDGP insitu homepage [FBrf0219073]
Curated genome annotation	Zheng, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126702]