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Gene Dmel\CG10262

General Information
Symbol	Dmel\CG10262	Species	D. melanogaster
Name		Annotation symbol	CG10262
Feature type	protein_coding_gene	FlyBase ID	FBgn0032813
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	37F2-37F2	Sequence location	2L:19,582,823..19,584,021 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG10262 (FBgn0032813). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: DNA binding. Based on sequence similarity, it is predicted to be involved in the biological process: DNA replication. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Proliferating cell nuclear antigen, PCNA; Proliferating cell nuclear antigen, PCNA, C-terminal; Proliferating cell nuclear antigen, PCNA, N-terminal; Proliferating cell nuclear antigen, PCNA, conserved site. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed within 06-24 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. Comments on Affy2 ProbeSet: ProbeSet 1637404_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG10262. Gene sequence location is 2L:19582823..19584021.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN30543 HFA02030
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 37F2-37F2   Limits computationally determined from genome sequence between P{EP}EP623&P{PZ}spi01068 and P{lacW}l(2)k10239k10239
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG10262 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG10262-RA FBtr0081262  NM_136150   1065   255 CG10262-RB FBtr0305305     1150   216
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG10262-PA   FBpp0080803   28.5   255   4.67     NP_609994   AAF53835 CG10262-PB   FBpp0293848   24.2   216   4.75
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Proliferating cell nuclear antigen, PCNA (IPR000730) Proliferating cell nuclear antigen, PCNA, N-terminal (IPR022648) Proliferating cell nuclear antigen, PCNA, C-terminal (IPR022649) Proliferating cell nuclear antigen, PCNA, conserved site (IPR022659)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014134 AAF53835   BT021268 AAX33416   CO329926   EC250724   FE862863   FE862920   FE863011   FE863054   FE863110   FE863414   GH763171   GH765697   GH767138   GH769505
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q5BIF6 Q9VIT0
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0032813    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0032813 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed within 06-24 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0032813 expression level Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    99 embryo 04-06hr    138 embryo 06-08hr    563 embryo 08-10hr    719 embryo 10-12hr    1188 embryo 12-14hr    724 embryo 14-16hr    572 embryo 16-18hr    489 embryo 18-20hr    512 embryo 20-22hr    441 embryo 22-24hr    401 larva L1    343 larva L2    316 larva L3 12hr old    272 larva L3 puffstage 1-2    414 larva L3 puffstage 3-6    630 larva L3 puffstage 7-9    687 white prepupae new    606 white prepupae 12hr    760 white prepupae 24hr    991 pupae 2d postWPP    819 pupae 3d postWPP    669 pupae 4d postWPP    439 adult male 01day    583 adult male 05day    682 adult male 30day    560 adult female 01day    213 adult female 05day    152 adult female 30day    154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    99 embryo 04-06hr  (138) embryo 06-08hr  (563) embryo 08-10hr  (719) embryo 10-12hr  (1188) embryo 12-14hr  (724) embryo 14-16hr  (572) embryo 16-18hr  (489) embryo 18-20hr  (512) embryo 20-22hr  (441) embryo 22-24hr  (401) larva L1  (343) larva L2  (316) larva L3 12hr old  (272) larva L3 puffstage 1-2  (414) larva L3 puffstage 3-6  (630) larva L3 puffstage 7-9  (687) white prepupae new  (606) white prepupae 12hr  (760) white prepupae 24hr  (991) pupae 2d postWPP  (819) pupae 3d postWPP  (669) pupae 4d postWPP  (439) adult male 01day  (583) adult male 05day  (682) adult male 30day  (560) adult female 01day  (213) adult female 05day  (152) adult female 30day  (154) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    99 embryo 04-06hr    138 embryo 06-08hr    563 embryo 08-10hr    719 embryo 10-12hr    1188 embryo 12-14hr    724 embryo 14-16hr    572 embryo 16-18hr    489 embryo 18-20hr    512 embryo 20-22hr    441 embryo 22-24hr    401 larva L1    343 larva L2    316 larva L3 12hr old    272 larva L3 puffstage 1-2    414 larva L3 puffstage 3-6    630 larva L3 puffstage 7-9    687 white prepupae new    606 white prepupae 12hr    760 white prepupae 24hr    991 pupae 2d postWPP    819 pupae 3d postWPP    669 pupae 4d postWPP    439 adult male 01day    583 adult male 05day    682 adult male 30day    560 adult female 01day    213 adult female 05day    152 adult female 30day    154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    99 embryo 04-06hr    138 embryo 06-08hr    563 embryo 08-10hr    719 embryo 10-12hr    1188 embryo 12-14hr    724 embryo 14-16hr    572 embryo 16-18hr    489 embryo 18-20hr    512 embryo 20-22hr    441 embryo 22-24hr    401 larva L1    343 larva L2    316 larva L3 12hr old    272 larva L3 puffstage 1-2    414 larva L3 puffstage 3-6    630 larva L3 puffstage 7-9    687 white prepupae new    606 white prepupae 12hr    760 white prepupae 24hr    991 pupae 2d postWPP    819 pupae 3d postWPP    669 pupae 4d postWPP    439 adult male 01day    583 adult male 05day    682 adult male 30day    560 adult female 01day    213 adult female 05day    152 adult female 30day    154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    99 embryo 04-06hr    138 embryo 06-08hr    563 embryo 08-10hr    719 embryo 10-12hr    1188 embryo 12-14hr    724 embryo 14-16hr    572 embryo 16-18hr    489 embryo 18-20hr    512 embryo 20-22hr    441 embryo 22-24hr    401 larva L1    343 larva L2    316 larva L3 12hr old    272 larva L3 puffstage 1-2    414 larva L3 puffstage 3-6    630 larva L3 puffstage 7-9    687 white prepupae new    606 white prepupae 12hr    760 white prepupae 24hr    991 pupae 2d postWPP    819 pupae 3d postWPP    669 pupae 4d postWPP    439 adult male 01day    583 adult male 05day    682 adult male 30day    560 adult female 01day    213 adult female 05day    152 adult female 30day    154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0032813 expression level Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    99 embryo 04-06hr    138 embryo 06-08hr    563 embryo 08-10hr    719 embryo 10-12hr    1188 embryo 12-14hr    724 embryo 14-16hr    572 embryo 16-18hr    489 embryo 18-20hr    512 embryo 20-22hr    441 embryo 22-24hr    401 larva L1    343 larva L2    316 larva L3 12hr old    272 larva L3 puffstage 1-2    414 larva L3 puffstage 3-6    630 larva L3 puffstage 7-9    687 white prepupae new    606 white prepupae 12hr    760 white prepupae 24hr    991 pupae 2d postWPP    819 pupae 3d postWPP    669 pupae 4d postWPP    439 adult male 01day    583 adult male 05day    682 adult male 30day    560 adult female 01day    213 adult female 05day    152 adult female 30day    154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    99 embryo 04-06hr  138 embryo 06-08hr  (563) embryo 08-10hr  (719) embryo 10-12hr  (1188) embryo 12-14hr  (724) embryo 14-16hr  (572) embryo 16-18hr  (489) embryo 18-20hr  (512) embryo 20-22hr  (441) embryo 22-24hr  (401) larva L1  (343) larva L2  (316) larva L3 12hr old  (272) larva L3 puffstage 1-2  (414) larva L3 puffstage 3-6  (630) larva L3 puffstage 7-9  (687) white prepupae new  (606) white prepupae 12hr  (760) white prepupae 24hr  (991) pupae 2d postWPP  (819) pupae 3d postWPP  (669) pupae 4d postWPP  (439) adult male 01day  (583) adult male 05day  (682) adult male 30day  (560) adult female 01day  (213) adult female 05day  (152) adult female 30day  (154) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    99 embryo 04-06hr    138 embryo 06-08hr    563 embryo 08-10hr    719 embryo 10-12hr    1188 embryo 12-14hr    724 embryo 14-16hr    572 embryo 16-18hr    489 embryo 18-20hr    512 embryo 20-22hr    441 embryo 22-24hr    401 larva L1    343 larva L2    316 larva L3 12hr old    272 larva L3 puffstage 1-2    414 larva L3 puffstage 3-6    630 larva L3 puffstage 7-9    687 white prepupae new    606 white prepupae 12hr    760 white prepupae 24hr    991 pupae 2d postWPP    819 pupae 3d postWPP    669 pupae 4d postWPP    439 adult male 01day    583 adult male 05day    682 adult male 30day    560 adult female 01day    213 adult female 05day    152 adult female 30day    154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    99 embryo 04-06hr    138 embryo 06-08hr    563 embryo 08-10hr    719 embryo 10-12hr    1188 embryo 12-14hr    724 embryo 14-16hr    572 embryo 16-18hr    489 embryo 18-20hr    512 embryo 20-22hr    441 embryo 22-24hr    401 larva L1    343 larva L2    316 larva L3 12hr old    272 larva L3 puffstage 1-2    414 larva L3 puffstage 3-6    630 larva L3 puffstage 7-9    687 white prepupae new    606 white prepupae 12hr    760 white prepupae 24hr    991 pupae 2d postWPP    819 pupae 3d postWPP    669 pupae 4d postWPP    439 adult male 01day    583 adult male 05day    682 adult male 30day    560 adult female 01day    213 adult female 05day    152 adult female 30day    154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    95 embryo 02-04hr    99 embryo 04-06hr    138 embryo 06-08hr    563 embryo 08-10hr    719 embryo 10-12hr    1188 embryo 12-14hr    724 embryo 14-16hr    572 embryo 16-18hr    489 embryo 18-20hr    512 embryo 20-22hr    441 embryo 22-24hr    401 larva L1    343 larva L2    316 larva L3 12hr old    272 larva L3 puffstage 1-2    414 larva L3 puffstage 3-6    630 larva L3 puffstage 7-9    687 white prepupae new    606 white prepupae 12hr    760 white prepupae 24hr    991 pupae 2d postWPP    819 pupae 3d postWPP    669 pupae 4d postWPP    439 adult male 01day    583 adult male 05day    682 adult male 30day    560 adult female 01day    213 adult female 05day    152 adult female 30day    154 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0032813    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0032813 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Little or no expression detected in any larval or adult organs/tissues. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0032813 expression level Tissue   Expression Level Larval Central Nervous System    24.35 Larval Midgut    6.1 Larval Hindgut    9 Larval Malpighian Tubules    29.5 Larval Fat Body    40.6 Larval Salivary Gland    32 Larval Trachea    19.975 Larval Carcass    5.3 Adult Head    21.4 Adult Eye    55.225 Adult Brain    56.6 Adult Thoracic-Abdominal Ganglion    53 Adult Crop no informative data Adult Midgut    4 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27.675 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca    19.5 Adult Ovary    2.2 Adult Testis    29.8 Adult Male Accessory Gland    9.2 Adult Carcass no informative data Expression Level Scale  None   Low  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    24.35 Larval Midgut    6.1 Larval Hindgut    9 Larval Malpighian Tubules    29.5 Larval Fat Body    40.6 Larval Salivary Gland    32 Larval Trachea    19.975 Larval Carcass    5.3 Adult Head    21.4 Adult Eye    55.225 Adult Brain    56.6 Adult Thoracic-Abdominal Ganglion    53 Adult Crop no informative data Adult Midgut    4 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27.675 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca    19.5 Adult Ovary    2.2 Adult Testis    29.8 Adult Male Accessory Gland    9.2 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    24.35 Larval Midgut    6.1 Larval Hindgut    9 Larval Malpighian Tubules    29.5 Larval Fat Body    40.6 Larval Salivary Gland    32 Larval Trachea    19.975 Larval Carcass    5.3 Adult Head    21.4 Adult Eye    55.225 Adult Brain    56.6 Adult Thoracic-Abdominal Ganglion    53 Adult Crop no informative data Adult Midgut    4 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27.675 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca    19.5 Adult Ovary    2.2 Adult Testis    29.8 Adult Male Accessory Gland    9.2 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    24.35 Larval Midgut    6.1 Larval Hindgut    9 Larval Malpighian Tubules    29.5 Larval Fat Body    40.6 Larval Salivary Gland    32 Larval Trachea    19.975 Larval Carcass    5.3 Adult Head    21.4 Adult Eye    55.225 Adult Brain    56.6 Adult Thoracic-Abdominal Ganglion    53 Adult Crop no informative data Adult Midgut    4 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27.675 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca    19.5 Adult Ovary    2.2 Adult Testis    29.8 Adult Male Accessory Gland    9.2 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0032813 expression level Tissue   Expression Level Larval Central Nervous System    24.35 Larval Midgut    6.1 Larval Hindgut    9 Larval Malpighian Tubules    29.5 Larval Fat Body    40.6 Larval Salivary Gland    32 Larval Trachea    19.975 Larval Carcass    5.3 Adult Head    21.4 Adult Eye    55.225 Adult Brain    56.6 Adult Thoracic-Abdominal Ganglion    53 Adult Crop no informative data Adult Midgut    4 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27.675 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca    19.5 Adult Ovary    2.2 Adult Testis    29.8 Adult Male Accessory Gland    9.2 Adult Carcass no informative data Expression Level Scale  None   Low  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    24.35 Larval Midgut    6.1 Larval Hindgut    9 Larval Malpighian Tubules    29.5 Larval Fat Body    40.6 Larval Salivary Gland    32 Larval Trachea    19.975 Larval Carcass    5.3 Adult Head    21.4 Adult Eye    55.225 Adult Brain    56.6 Adult Thoracic-Abdominal Ganglion    53 Adult Crop no informative data Adult Midgut    4 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27.675 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca    19.5 Adult Ovary    2.2 Adult Testis    29.8 Adult Male Accessory Gland    9.2 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    24.35 Larval Midgut    6.1 Larval Hindgut    9 Larval Malpighian Tubules    29.5 Larval Fat Body    40.6 Larval Salivary Gland    32 Larval Trachea    19.975 Larval Carcass    5.3 Adult Head    21.4 Adult Eye    55.225 Adult Brain    56.6 Adult Thoracic-Abdominal Ganglion    53 Adult Crop no informative data Adult Midgut    4 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27.675 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca    19.5 Adult Ovary    2.2 Adult Testis    29.8 Adult Male Accessory Gland    9.2 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    24.35 Larval Midgut    6.1 Larval Hindgut    9 Larval Malpighian Tubules    29.5 Larval Fat Body    40.6 Larval Salivary Gland    32 Larval Trachea    19.975 Larval Carcass    5.3 Adult Head    21.4 Adult Eye    55.225 Adult Brain    56.6 Adult Thoracic-Abdominal Ganglion    53 Adult Crop no informative data Adult Midgut    4 Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart    27.675 Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca    19.5 Adult Ovary    2.2 Adult Testis    29.8 Adult Male Accessory Gland    9.2 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop no informative data Adult Midgut     Adult Hindgut no informative data Adult Malpighian Tubules no informative data Adult Fat Body no informative data Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca no informative data Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass no informative data FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    21.4   NA  Eye    55.225   NA  Brain    56.6   24.35  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    53   NA  Crop    no informative data   6.1  Midgut    4   9  Hindgut    no informative data   29.5  Malpighian Tubules    no informative data   40.6  Fat Body    no informative data   32  Salivary Gland    no informative data   NA  Heart    27.675   19.975  Trachea    NA   NA  VirginFemale Spermatheca    no informative data   NA  InseminatedFemale Spermatheca    19.5   NA  Ovary    2.2   NA  Testis    29.8   NA  Male Accessory Gland    9.2   5.3  Carcass    no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_25
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0032813 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10262-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG10262d08604 viable, with Scer\GAL4pnr-MD237 CG10262GD4432 Sterility Allele fertile CG10262d08604 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG10262 Class Mutagen Stocks Known lesion CG10262d08604 P-element activity 2 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG10262 Class Mutagen Stocks Known lesion CG10262GD4432 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG10262KK110543 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(2L)Exel6044 (Ryder, 2004.4.26) Df(2L)Exel8041 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD4432} NA P{KK110543} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{XP}CG10262d08604 NA
Gene Ontology: Function, Process & Cellular Component ( 5 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 5 terms )
Molecular Function
CV term Evidence References
DNA binding inferred from sequence or structural similarity with UniProtKB:O16852 (FlyBase, 1992-) DNA polymerase processivity factor activity inferred from electronic annotation with InterPro:IPR000730, InterPro:IPR022648, InterPro:IPR022649 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
DNA replication inferred from sequence or structural similarity with UniProtKB:O16852 (FlyBase, 1992-) regulation of DNA replication inferred from electronic annotation with InterPro:IPR000730, InterPro:IPR022648, InterPro:IPR022649 (FlyBase Curators et al., 2004-)
Cellular Component
CV term Evidence References
PCNA complex inferred from electronic annotation with InterPro:IPR000730, InterPro:IPR022648, InterPro:IPR022649 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG10262 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 61233 DroID - A comprehensive database of gene and protein interactions. • FBgn0032813 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 35257
Orthologs
Genome-wide drosophilid orthologs	Dana\GF15480 Dere\GG21617 Dgri\GH13054 Dmoj\GI18198 Dper\GL26136 Dpse\GA10201 Dsec\GM16995 Dsim\GD21742 Dvir\GJ14692 Dwil\GK15224 Dyak\GE12637
Curated drosophilid orthologs	Dpse\GA10201
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • cn13079 Cryptococcus neoformans (yeast-like fungus) XP_651510 Entamoeba histolytica (anaerobic protozoan) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0230365 FBgn0217229 FBgn0201899 FBgn0193164 FBgn0171908 FBgn0070260 FBgn0163718 FBgn0140937 FBgn0130901 FBgn0120531 FBgn0113795 FBgn0092505
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
Bloomington	19298 w1118; P{XP}CG10262d08604
Harvard	- P{XP}CG10262d08604
VDRC	v37672 w1118; P{GD4432}v37672
Genomic Clones ( 1 )
	BACR30H01 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 12 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE50044
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones	EK294161 RM06703 RM06803 RM07003 RM07103 RM07203 RM07303 RP001020648 RP001031021 RP001035884 RP001053510
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0032813 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 35257
Antibody Information
	polyclonal (Ruike et al., 2006)
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_136150 RefSeq (Proteins) • NP_609994 DDBJ / EMBL / GenBank • AAF53835 AAX33416 BT021268 Entrez Gene - A searchable database of RefSeq genes. • 35257 UniProtKB/TrEMBL • Q5BIF6 Q9VIT0
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Proliferating cell nuclear antigen, PCNA (IPR000730) Proliferating cell nuclear antigen, PCNA, N-terminal (IPR022648) Proliferating cell nuclear antigen, PCNA, C-terminal (IPR022649) Proliferating cell nuclear antigen, PCNA, conserved site (IPR022659)
Linkouts
	BioGRID - A database of protein and genetic interactions • 61233 DroID - A comprehensive database of gene and protein interactions. • FBgn0032813 DRSC - Results from RNAi screens. • FBgn0032813 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0032813 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10262-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0032813 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 35257 InParanoid A subset of ortholog calls from InParanoid. • cn13079 Cryptococcus neoformans (yeast-like fungus) XP_651510 Entamoeba histolytica (anaerobic protozoan) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 35257 modMine - Data generated by the modENCODE project. • FBgn0032813 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0230365 FBgn0217229 FBgn0201899 FBgn0193164 FBgn0171908 FBgn0070260 FBgn0163718 FBgn0140937 FBgn0130901 FBgn0120531 FBgn0113795 FBgn0092505
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	CG10262 (Cayirlioglu et al., 2003, Keleman et al., 2009.8.5) DmPCNA2 (Ruike et al., 2006) PCNA2 (Cayirlioglu et al., 2003)
Name Synonym
Secondary FlyBase IDs
References ( 15 )
Research paper	Ruike et al., 2006, FEBS J. 273(22): 5062--5073 Characterization of a second proliferating cell nuclear antigen (PCNA2) from Drosophila melanogaster. [FBrf0193463] Cayirlioglu et al., 2003, Molec. Cell. Biol. 23(6): 2123--2134 Transcriptional repressor functions of Drosophila E2F1 and E2F2 cooperate to inhibit genomic DNA synthesis in ovarian follicle cells. [FBrf0159210]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase. Exelixis insertion alleles that are not in FlyBase. [FBrf0179797] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Wortman, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126698]