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Gene Dmel\CG9318

General Information
Symbol	Dmel\CG9318	Species	D. melanogaster
Name		Annotation symbol	CG9318
Feature type	protein_coding_gene	FlyBase ID	FBgn0032880
Gene Model Status	Current	Stock availability	3 publicly available
Also Known As	38E.10
Genomic Location
Chromosome (arm)	2L	Recombination map
Cytogenetic map	38E4-38E5	Sequence location	2L:20,730,645..20,734,310 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG9318 (FBgn0032880). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Nonaspanin (TM9SF). Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages, at stages throughout the larval period, during early pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval/adult salivary gland, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval trachea, adult female reproductive system, adult testis, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1636977_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG9318. Gene sequence location is 2L:20730645..20734310.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN20375 HFA03197
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 38E4-38E5   Limits computationally determined from genome sequence between P{PZ}Hr3802306&P{PZ}dia1 and P{EP}CG31673EP432
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG9318 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.40
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG9318-RA FBtr0081393  NM_136209   2582   659
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG9318-PA   FBpp0080923   74.6   659   7.81     NP_610053   AAF53917
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Nonaspanin (TM9SF) (IPR004240)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA391559   AA392927   AA697239   AE014134 AAF53917   AC004759   AI064013   AI114093   AI134013   AI134465   AI134695   AI134832   AI135632   AI238931   AI294096   AI297075   AI512405   AI515892   AQ072892   AW943713   AY069665 AAL39810   BE975186   BF486153   BF486414   BF495835   BF501996   BG640271   BI164375   BI169859   BI213564   BI214189   BI228654   BI230239   BI230659   BI231773   BI232700   BI234273   BI237643   BI239629   BI243641   BI357163   BI361391   BI361716   BI363183   BI363202   BI363710   BI366008   BI366693   BI367565   BI368009   BI373178   BI375930   BI484170   BI577901   BI578969   BI580198   BI584458   BI607198   BI628722   BP542857   BP542858   BP557417   BP557418   BP557419   BP557420   BP559128   BP559129   CL528066   CO153936   CO191058   CO294773   CO295630   CO297859   CO306973   CO330931   CO341393   CO344410   CZ482543   EC066067   EC066103   EC199910   EC203239   EC207047   EC224538   EC247130   EC250845   EC253896   EC254732   EC260916   EC267231   FD586360   FD586390   FD587311   GH740176   GH741200   GH743420   GH743766   GH765837   GH765993   GH768827   GH779212   GH779595   L80120
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9VIK1
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0032880    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0032880 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-18 hour embryonic stages, at stages throughout the larval period, during early pupal stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0032880 expression level Developmental Stage   Expression Level embryo 00-02hr    4669 embryo 02-04hr    3736 embryo 04-06hr    6624 embryo 06-08hr    7489 embryo 08-10hr    7346 embryo 10-12hr    7082 embryo 12-14hr    8301 embryo 14-16hr    4603 embryo 16-18hr    4568 embryo 18-20hr    3276 embryo 20-22hr    2213 embryo 22-24hr    2594 larva L1    3180 larva L2    4586 larva L3 12hr old    3804 larva L3 puffstage 1-2    3436 larva L3 puffstage 3-6    4223 larva L3 puffstage 7-9    4926 white prepupae new    4953 white prepupae 12hr    3362 white prepupae 24hr    3994 pupae 2d postWPP    3583 pupae 3d postWPP    2821 pupae 4d postWPP    2149 adult male 01day    3718 adult male 05day    3800 adult male 30day    3421 adult female 01day    2919 adult female 05day    4287 adult female 30day    4151 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4669) embryo 02-04hr  (3736) embryo 04-06hr  (6624) embryo 06-08hr  (7489) embryo 08-10hr  (7346) embryo 10-12hr  (7082) embryo 12-14hr  (8301) embryo 14-16hr  (4603) embryo 16-18hr  (4568) embryo 18-20hr  (3276) embryo 20-22hr  (2213) embryo 22-24hr  (2594) larva L1  (3180) larva L2  (4586) larva L3 12hr old  (3804) larva L3 puffstage 1-2  (3436) larva L3 puffstage 3-6  (4223) larva L3 puffstage 7-9  (4926) white prepupae new  (4953) white prepupae 12hr  (3362) white prepupae 24hr  (3994) pupae 2d postWPP  (3583) pupae 3d postWPP  (2821) pupae 4d postWPP  (2149) adult male 01day  (3718) adult male 05day  (3800) adult male 30day  (3421) adult female 01day  (2919) adult female 05day  (4287) adult female 30day  (4151) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4669) embryo 02-04hr  (3736) embryo 04-06hr  (6624) embryo 06-08hr  (7489) embryo 08-10hr  (7346) embryo 10-12hr  (7082) embryo 12-14hr  (8301) embryo 14-16hr  (4603) embryo 16-18hr  (4568) embryo 18-20hr  (3276) embryo 20-22hr  (2213) embryo 22-24hr  (2594) larva L1  (3180) larva L2  (4586) larva L3 12hr old  (3804) larva L3 puffstage 1-2  (3436) larva L3 puffstage 3-6  (4223) larva L3 puffstage 7-9  (4926) white prepupae new  (4953) white prepupae 12hr  (3362) white prepupae 24hr  (3994) pupae 2d postWPP  (3583) pupae 3d postWPP  (2821) pupae 4d postWPP  (2149) adult male 01day  (3718) adult male 05day  (3800) adult male 30day  (3421) adult female 01day  (2919) adult female 05day  (4287) adult female 30day  (4151) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4669 embryo 02-04hr    3736 embryo 04-06hr    6624 embryo 06-08hr    7489 embryo 08-10hr    7346 embryo 10-12hr    7082 embryo 12-14hr    8301 embryo 14-16hr    4603 embryo 16-18hr    4568 embryo 18-20hr    3276 embryo 20-22hr    2213 embryo 22-24hr    2594 larva L1    3180 larva L2    4586 larva L3 12hr old    3804 larva L3 puffstage 1-2    3436 larva L3 puffstage 3-6    4223 larva L3 puffstage 7-9    4926 white prepupae new    4953 white prepupae 12hr    3362 white prepupae 24hr    3994 pupae 2d postWPP    3583 pupae 3d postWPP    2821 pupae 4d postWPP    2149 adult male 01day    3718 adult male 05day    3800 adult male 30day    3421 adult female 01day    2919 adult female 05day    4287 adult female 30day    4151 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4669 embryo 02-04hr    3736 embryo 04-06hr    6624 embryo 06-08hr    7489 embryo 08-10hr    7346 embryo 10-12hr    7082 embryo 12-14hr    8301 embryo 14-16hr    4603 embryo 16-18hr    4568 embryo 18-20hr    3276 embryo 20-22hr    2213 embryo 22-24hr    2594 larva L1    3180 larva L2    4586 larva L3 12hr old    3804 larva L3 puffstage 1-2    3436 larva L3 puffstage 3-6    4223 larva L3 puffstage 7-9    4926 white prepupae new    4953 white prepupae 12hr    3362 white prepupae 24hr    3994 pupae 2d postWPP    3583 pupae 3d postWPP    2821 pupae 4d postWPP    2149 adult male 01day    3718 adult male 05day    3800 adult male 30day    3421 adult female 01day    2919 adult female 05day    4287 adult female 30day    4151 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0032880 expression level Developmental Stage   Expression Level embryo 00-02hr    4669 embryo 02-04hr    3736 embryo 04-06hr    6624 embryo 06-08hr    7489 embryo 08-10hr    7346 embryo 10-12hr    7082 embryo 12-14hr    8301 embryo 14-16hr    4603 embryo 16-18hr    4568 embryo 18-20hr    3276 embryo 20-22hr    2213 embryo 22-24hr    2594 larva L1    3180 larva L2    4586 larva L3 12hr old    3804 larva L3 puffstage 1-2    3436 larva L3 puffstage 3-6    4223 larva L3 puffstage 7-9    4926 white prepupae new    4953 white prepupae 12hr    3362 white prepupae 24hr    3994 pupae 2d postWPP    3583 pupae 3d postWPP    2821 pupae 4d postWPP    2149 adult male 01day    3718 adult male 05day    3800 adult male 30day    3421 adult female 01day    2919 adult female 05day    4287 adult female 30day    4151 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4669) embryo 02-04hr  (3736) embryo 04-06hr  (6624) embryo 06-08hr  (7489) embryo 08-10hr  (7346) embryo 10-12hr  (7082) embryo 12-14hr  (8301) embryo 14-16hr  (4603) embryo 16-18hr  (4568) embryo 18-20hr  (3276) embryo 20-22hr  (2213) embryo 22-24hr  (2594) larva L1  (3180) larva L2  (4586) larva L3 12hr old  (3804) larva L3 puffstage 1-2  (3436) larva L3 puffstage 3-6  (4223) larva L3 puffstage 7-9  (4926) white prepupae new  (4953) white prepupae 12hr  (3362) white prepupae 24hr  (3994) pupae 2d postWPP  (3583) pupae 3d postWPP  (2821) pupae 4d postWPP  (2149) adult male 01day  (3718) adult male 05day  (3800) adult male 30day  (3421) adult female 01day  (2919) adult female 05day  (4287) adult female 30day  (4151) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4669) embryo 02-04hr  (3736) embryo 04-06hr  (6624) embryo 06-08hr  (7489) embryo 08-10hr  (7346) embryo 10-12hr  (7082) embryo 12-14hr  (8301) embryo 14-16hr  (4603) embryo 16-18hr  (4568) embryo 18-20hr  (3276) embryo 20-22hr  2213 embryo 22-24hr  (2594) larva L1  (3180) larva L2  (4586) larva L3 12hr old  (3804) larva L3 puffstage 1-2  (3436) larva L3 puffstage 3-6  (4223) larva L3 puffstage 7-9  (4926) white prepupae new  (4953) white prepupae 12hr  (3362) white prepupae 24hr  (3994) pupae 2d postWPP  (3583) pupae 3d postWPP  (2821) pupae 4d postWPP  2149 adult male 01day  (3718) adult male 05day  (3800) adult male 30day  (3421) adult female 01day  (2919) adult female 05day  (4287) adult female 30day  (4151) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4669 embryo 02-04hr    3736 embryo 04-06hr    6624 embryo 06-08hr    7489 embryo 08-10hr    7346 embryo 10-12hr    7082 embryo 12-14hr    8301 embryo 14-16hr    4603 embryo 16-18hr    4568 embryo 18-20hr    3276 embryo 20-22hr    2213 embryo 22-24hr    2594 larva L1    3180 larva L2    4586 larva L3 12hr old    3804 larva L3 puffstage 1-2    3436 larva L3 puffstage 3-6    4223 larva L3 puffstage 7-9    4926 white prepupae new    4953 white prepupae 12hr    3362 white prepupae 24hr    3994 pupae 2d postWPP    3583 pupae 3d postWPP    2821 pupae 4d postWPP    2149 adult male 01day    3718 adult male 05day    3800 adult male 30day    3421 adult female 01day    2919 adult female 05day    4287 adult female 30day    4151 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4669 embryo 02-04hr    3736 embryo 04-06hr    6624 embryo 06-08hr    7489 embryo 08-10hr    7346 embryo 10-12hr    7082 embryo 12-14hr    8301 embryo 14-16hr    4603 embryo 16-18hr    4568 embryo 18-20hr    3276 embryo 20-22hr    2213 embryo 22-24hr    2594 larva L1    3180 larva L2    4586 larva L3 12hr old    3804 larva L3 puffstage 1-2    3436 larva L3 puffstage 3-6    4223 larva L3 puffstage 7-9    4926 white prepupae new    4953 white prepupae 12hr    3362 white prepupae 24hr    3994 pupae 2d postWPP    3583 pupae 3d postWPP    2821 pupae 4d postWPP    2149 adult male 01day    3718 adult male 05day    3800 adult male 30day    3421 adult female 01day    2919 adult female 05day    4287 adult female 30day    4151 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0032880    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0032880 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: larval/adult salivary gland, adult male accessory gland. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, larval/adult fat body, larval trachea, adult female reproductive system, adult testis, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0032880 expression level Tissue   Expression Level Larval Central Nervous System    301.85 Larval Midgut    353.4 Larval Hindgut    377.3 Larval Malpighian Tubules    379.5 Larval Fat Body    359.4 Larval Salivary Gland    1708.9 Larval Trachea    353.75 Larval Carcass    349.2 Adult Head    257.1 Adult Eye    183.375 Adult Brain    382.5 Adult Thoracic-Abdominal Ganglion    384.2 Adult Crop    319.4 Adult Midgut    381.9 Adult Hindgut    340.1 Adult Malpighian Tubules    178.3 Adult Fat Body    235.6 Adult Salivary Gland    1587.3 Adult Heart    300.625 Adult VirginFemale Spermatheca    122.7 Adult InseminatedFemale Spermatheca    142.4 Adult Ovary    239.7 Adult Testis    248.8 Adult Male Accessory Gland    1076.1 Adult Carcass    245.5 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    301.85 Larval Midgut    353.4 Larval Hindgut    377.3 Larval Malpighian Tubules    379.5 Larval Fat Body    359.4 Larval Salivary Gland  (1708.9) Larval Trachea    353.75 Larval Carcass    349.2 Adult Head    257.1 Adult Eye    183.375 Adult Brain    382.5 Adult Thoracic-Abdominal Ganglion    384.2 Adult Crop    319.4 Adult Midgut    381.9 Adult Hindgut    340.1 Adult Malpighian Tubules    178.3 Adult Fat Body    235.6 Adult Salivary Gland  (1587.3) Adult Heart    300.625 Adult VirginFemale Spermatheca    122.7 Adult InseminatedFemale Spermatheca    142.4 Adult Ovary    239.7 Adult Testis    248.8 Adult Male Accessory Gland  (1076.1) Adult Carcass    245.5 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    301.85 Larval Midgut    353.4 Larval Hindgut    377.3 Larval Malpighian Tubules    379.5 Larval Fat Body    359.4 Larval Salivary Gland  (1708.9) Larval Trachea    353.75 Larval Carcass    349.2 Adult Head    257.1 Adult Eye    183.375 Adult Brain    382.5 Adult Thoracic-Abdominal Ganglion    384.2 Adult Crop    319.4 Adult Midgut    381.9 Adult Hindgut    340.1 Adult Malpighian Tubules    178.3 Adult Fat Body    235.6 Adult Salivary Gland  (1587.3) Adult Heart    300.625 Adult VirginFemale Spermatheca    122.7 Adult InseminatedFemale Spermatheca    142.4 Adult Ovary    239.7 Adult Testis    248.8 Adult Male Accessory Gland  1076.1 Adult Carcass    245.5 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    301.85 Larval Midgut    353.4 Larval Hindgut    377.3 Larval Malpighian Tubules    379.5 Larval Fat Body    359.4 Larval Salivary Gland    1708.9 Larval Trachea    353.75 Larval Carcass    349.2 Adult Head    257.1 Adult Eye    183.375 Adult Brain    382.5 Adult Thoracic-Abdominal Ganglion    384.2 Adult Crop    319.4 Adult Midgut    381.9 Adult Hindgut    340.1 Adult Malpighian Tubules    178.3 Adult Fat Body    235.6 Adult Salivary Gland    1587.3 Adult Heart    300.625 Adult VirginFemale Spermatheca    122.7 Adult InseminatedFemale Spermatheca    142.4 Adult Ovary    239.7 Adult Testis    248.8 Adult Male Accessory Gland    1076.1 Adult Carcass    245.5 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0032880 expression level Tissue   Expression Level Larval Central Nervous System    301.85 Larval Midgut    353.4 Larval Hindgut    377.3 Larval Malpighian Tubules    379.5 Larval Fat Body    359.4 Larval Salivary Gland    1708.9 Larval Trachea    353.75 Larval Carcass    349.2 Adult Head    257.1 Adult Eye    183.375 Adult Brain    382.5 Adult Thoracic-Abdominal Ganglion    384.2 Adult Crop    319.4 Adult Midgut    381.9 Adult Hindgut    340.1 Adult Malpighian Tubules    178.3 Adult Fat Body    235.6 Adult Salivary Gland    1587.3 Adult Heart    300.625 Adult VirginFemale Spermatheca    122.7 Adult InseminatedFemale Spermatheca    142.4 Adult Ovary    239.7 Adult Testis    248.8 Adult Male Accessory Gland    1076.1 Adult Carcass    245.5 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    301.85 Larval Midgut    353.4 Larval Hindgut    377.3 Larval Malpighian Tubules    379.5 Larval Fat Body    359.4 Larval Salivary Gland  (1708.9) Larval Trachea    353.75 Larval Carcass    349.2 Adult Head    257.1 Adult Eye    183.375 Adult Brain    382.5 Adult Thoracic-Abdominal Ganglion    384.2 Adult Crop    319.4 Adult Midgut    381.9 Adult Hindgut    340.1 Adult Malpighian Tubules    178.3 Adult Fat Body    235.6 Adult Salivary Gland  (1587.3) Adult Heart    300.625 Adult VirginFemale Spermatheca    122.7 Adult InseminatedFemale Spermatheca    142.4 Adult Ovary    239.7 Adult Testis    248.8 Adult Male Accessory Gland  (1076.1) Adult Carcass    245.5 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    301.85 Larval Midgut    353.4 Larval Hindgut    377.3 Larval Malpighian Tubules    379.5 Larval Fat Body    359.4 Larval Salivary Gland  1708.9 Larval Trachea    353.75 Larval Carcass    349.2 Adult Head    257.1 Adult Eye    183.375 Adult Brain    382.5 Adult Thoracic-Abdominal Ganglion    384.2 Adult Crop    319.4 Adult Midgut    381.9 Adult Hindgut    340.1 Adult Malpighian Tubules    178.3 Adult Fat Body    235.6 Adult Salivary Gland  1587.3 Adult Heart    300.625 Adult VirginFemale Spermatheca    122.7 Adult InseminatedFemale Spermatheca    142.4 Adult Ovary    239.7 Adult Testis    248.8 Adult Male Accessory Gland  1076.1 Adult Carcass    245.5 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    301.85 Larval Midgut    353.4 Larval Hindgut    377.3 Larval Malpighian Tubules    379.5 Larval Fat Body    359.4 Larval Salivary Gland    1708.9 Larval Trachea    353.75 Larval Carcass    349.2 Adult Head    257.1 Adult Eye    183.375 Adult Brain    382.5 Adult Thoracic-Abdominal Ganglion    384.2 Adult Crop    319.4 Adult Midgut    381.9 Adult Hindgut    340.1 Adult Malpighian Tubules    178.3 Adult Fat Body    235.6 Adult Salivary Gland    1587.3 Adult Heart    300.625 Adult VirginFemale Spermatheca    122.7 Adult InseminatedFemale Spermatheca    142.4 Adult Ovary    239.7 Adult Testis    248.8 Adult Male Accessory Gland    1076.1 Adult Carcass    245.5 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    257.1   NA  Eye    183.375   NA  Brain    382.5   301.85  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    384.2   NA  Crop    319.4   353.4  Midgut    381.9   377.3  Hindgut    340.1   379.5  Malpighian Tubules    178.3   359.4  Fat Body    235.6   1708.9  Salivary Gland    1587.3   NA  Heart    300.625   353.75  Trachea    NA   NA  VirginFemale Spermatheca    122.7   NA  InseminatedFemale Spermatheca    142.4   NA  Ovary    239.7   NA  Testis    248.8   NA  Male Accessory Gland    1076.1   349.2  Carcass    245.5 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_03
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0032880 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9318-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG9318 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG9318 Class Mutagen Stocks Known lesion CG9318EY07843 P-element activity 2 -- CG9318f00057 piggyBac transposase 1 -- CG9318EP2088 P-element activity 0 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG9318 Class Mutagen Stocks Known lesion CG9318GD1792 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD1792} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG9318EP2088 NA P{EPgy2}CG9318EY07843 NA P{GSV1}C719.1C719.1 NA miscellaneous insertions PBac{WH}CG9318f00057 NA insertion of enhancer trap P{lacW}l(2)SH0470SH0470 No
Gene Ontology: Function, Process & Cellular Component ( 1 unique term )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
integral to membrane inferred from electronic annotation with InterPro:IPR004240 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG9318 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 61298 DroID - A comprehensive database of gene and protein interactions. • FBgn0032880 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 35335
Orthologs
Genome-wide drosophilid orthologs	Dana\GF14550 Dere\GG21552 Dgri\GH10847 Dmoj\GI19598 Dper\GL19593 Dpse\GA21696 Dsec\GM23311 Dsim\GD21683 Dvir\GJ17423 Dwil\GK14911 Dyak\GE13546
Curated drosophilid orthologs	Dpse\GA21696
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AGAP009919-PA Anopheles gambiae (mosquito) XP_624833.1 Apis mellifera (honey bee) XP_001952711.1 Acyrthosiphon pisum (pea aphid) 20927 Batrachochytrium dendrobatidis (chytrid fungus) 120160 Branchiostoma floridae (lancelet) BGIBMGA003112-PA Bombyx mori (silk worm) ENSBTAP00000002080 Bos taurus (bovine) CN09434 Caenorhabditis brenneri (small nematode) CBP05423 Caenorhabditis briggsae (nematode) CE09254 Caenorhabditis elegans (worm) ENSCAFP00000008708 Canis familiaris (dog) JA16838 Caenorhabditis japonica (nematode) CPIJ004615 Culex pipens (mosquito) ENSCPOP00000007560 Cavia porcellus (guinea pig) RP23309 Caenorhabditis remanei (nematode) ENSCSAVP00000014772 Ciona savignyi (sedentary tunicate) 180051 Capitella spl (polychaete worm) 200371 Daphnia pulex (daphnia) ENSDARP00000016201 Danio rerio (zebra fish) ENSECAP00000021452 Equus caballus (horse) ENSGACP00000022763 Gymnopilus aculeatus (mushroom) ENSGALP00000027216 Gallus gallus (chicken) 190496 Hypsipyla robusta (cedar shoot borer) ENSP00000365567 Homo sapiens (human) ISCW021262-PA Ixodes scapularis (deer tick) KLLA0F18931g Kluyveromyces lactis (yeast) 211611 Lottia gigantea (owl limpet) 37855 Monocosta brevicollis (choanoflagellate) ENSMODP00000009668 Monodelphis domestica (gray opossum) ENSMMUP00000025694 Macaca mulatta (rhesus monkey) ENSMUSP00000097868 Mus musculus (house mouse) 235286 Nematostella vectensis (starlet anemone) XP_001606496.1 Nasonia vitripennis (wasp) ENSOANP00000011140 Ornithorynchus anatinus (platypus) ENSORLP00000002081 Oryzias latipes (japanese killifish) PHUM004142-PA Pediculus humanus (human body louse) PP12597 Pristionchus pacificus (nematode) ENSPPYP00000006235 Pongo pygmaeus (orangutan) ENSPTRP00000010198 Pan troglodytes (chimpanzee) ENSRNOP00000054249 Rattus norvegicus (norway rat) YDR107C Saccharomyces cerevisiae (budding yeast) YLR083C Saccharomyces cerevisiae (budding yeast) Smp_162040 Schistosoma mansoni (trematode parasite) SPBC1105.08 Schizosaccharomyces pombe (fission yeast) XP_793969.2 Strongylocentrotus purpuratus (purple sea urchin) 23833 Trichoplax adhaerens (metazoa) XP_969548.2 Tribolium castaneum (red flour beetle) ENSTNIP00000006183 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000015195 Takifugu rubripes (pufferfish Takifugu) 3671.m00020 Tetrahymena thermophila (ciliate protozoa) ENSXETP00000007529 Xenopus tropicalis (frog) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV11230 LH16120 ISCW021262 FBgn0231209 FBgn0216916 FBgn0204595 FBgn0193106 FBgn0178178 JGI_V11_200371 FBgn0081681 FBgn0157191 FBgn0142335 FBgn0118328 FBgn0113730 FBgn0091577 CPIJ004615 BGIBMGA003112 ACYPI006837 GB10288 AGAP009919 AAEL017204 PB19899 PHUM465400 GLEAN_13542
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
Bloomington	16863 y1 w67c23; P{EPgy2}CG9318EY07843/CyO
Harvard	- PBac{WH}CG9318f00057
Kyoto	114441 yd2 w1118 P{ey-FLP.N}2; P{EPgy2}CG9318EY07843 P{neoFRT}40A/CyO y+
Genomic Clones ( 2 )
	BACR07D17 BACR31P14 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 90 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD44273
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT09501 AT17596 AT20358 AT20713 GH04256 GH10773 GH11343 GH11939 GH12228 GH12391 GH13457 GH15074 GM09501 LD10560 LD12083 LD41587 LP07393 LP11262 RE04041 RE08908 RE11151 RE14378 RE18986 RE19923 RE24305 RE26265 RE28815 RE29951 RE33902 RE36173 RE41344 RE43558 RE45581 RE46048 RE47937 RE47961 RE48636 RE51436 RE52281 RE53358 RE53909 RE60410 RE63836 RE67221 RE71665 RE72926 RE74346 RH23669 RH57248 RH74211 SD11248
Other clones	53486 73365 77765 123785 147869 148698 193153 214313.9 214569.6 521950 522964 bs39e12 CK01.62C.H10 EK050561 EK170756 EK207632 EK211116 EK252932 EK296457 EN03136 EP12357 EP19227 FGC017D01 FGM309B11 FGM309B12 FGM319B04 RM01024 RM01224 RM01524 RP001005745 RP001011338 RP001013527 RP001014879 RP001016761 RP001033666 RP001052955 RP001053129 RP001053826
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0032880 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 35335
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_136209 RefSeq (Proteins) • NP_610053 DDBJ / EMBL / GenBank • AAF53917 AAL39810 AC004759 AI512405 AQ072892 AW943713 AY069665 CL528066 CZ482543 L80120 Entrez Gene - A searchable database of RefSeq genes. • 35335 UniProtKB/TrEMBL • Q9VIK1
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Nonaspanin (TM9SF) (IPR004240)
Linkouts
	BioGRID - A database of protein and genetic interactions • 61298 DroID - A comprehensive database of gene and protein interactions. • FBgn0032880 DRSC - Results from RNAi screens. • FBgn0032880 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0032880 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9318-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0032880 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 35335 InParanoid A subset of ortholog calls from InParanoid. • AGAP009919-PA Anopheles gambiae (mosquito) XP_624833.1 Apis mellifera (honey bee) XP_001952711.1 Acyrthosiphon pisum (pea aphid) 20927 Batrachochytrium dendrobatidis (chytrid fungus) 120160 Branchiostoma floridae (lancelet) BGIBMGA003112-PA Bombyx mori (silk worm) ENSBTAP00000002080 Bos taurus (bovine) CN09434 Caenorhabditis brenneri (small nematode) CBP05423 Caenorhabditis briggsae (nematode) CE09254 Caenorhabditis elegans (worm) ENSCAFP00000008708 Canis familiaris (dog) JA16838 Caenorhabditis japonica (nematode) CPIJ004615 Culex pipens (mosquito) ENSCPOP00000007560 Cavia porcellus (guinea pig) RP23309 Caenorhabditis remanei (nematode) ENSCSAVP00000014772 Ciona savignyi (sedentary tunicate) 180051 Capitella spl (polychaete worm) 200371 Daphnia pulex (daphnia) ENSDARP00000016201 Danio rerio (zebra fish) ENSECAP00000021452 Equus caballus (horse) ENSGACP00000022763 Gymnopilus aculeatus (mushroom) ENSGALP00000027216 Gallus gallus (chicken) 190496 Hypsipyla robusta (cedar shoot borer) ENSP00000365567 Homo sapiens (human) ISCW021262-PA Ixodes scapularis (deer tick) KLLA0F18931g Kluyveromyces lactis (yeast) 211611 Lottia gigantea (owl limpet) 37855 Monocosta brevicollis (choanoflagellate) ENSMODP00000009668 Monodelphis domestica (gray opossum) ENSMMUP00000025694 Macaca mulatta (rhesus monkey) ENSMUSP00000097868 Mus musculus (house mouse) 235286 Nematostella vectensis (starlet anemone) XP_001606496.1 Nasonia vitripennis (wasp) ENSOANP00000011140 Ornithorynchus anatinus (platypus) ENSORLP00000002081 Oryzias latipes (japanese killifish) PHUM004142-PA Pediculus humanus (human body louse) PP12597 Pristionchus pacificus (nematode) ENSPPYP00000006235 Pongo pygmaeus (orangutan) ENSPTRP00000010198 Pan troglodytes (chimpanzee) ENSRNOP00000054249 Rattus norvegicus (norway rat) YDR107C Saccharomyces cerevisiae (budding yeast) YLR083C Saccharomyces cerevisiae (budding yeast) Smp_162040 Schistosoma mansoni (trematode parasite) SPBC1105.08 Schizosaccharomyces pombe (fission yeast) XP_793969.2 Strongylocentrotus purpuratus (purple sea urchin) 23833 Trichoplax adhaerens (metazoa) XP_969548.2 Tribolium castaneum (red flour beetle) ENSTNIP00000006183 Tetraodon nigroviridis (green spotted pufferfish) ENSTRUP00000015195 Takifugu rubripes (pufferfish Takifugu) 3671.m00020 Tetrahymena thermophila (ciliate protozoa) ENSXETP00000007529 Xenopus tropicalis (frog) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 35335 modMine - Data generated by the modENCODE project. • FBgn0032880 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV11230 LH16120 ISCW021262 FBgn0231209 FBgn0216916 FBgn0204595 FBgn0193106 FBgn0178178 JGI_V11_200371 FBgn0081681 FBgn0157191 FBgn0142335 FBgn0118328 FBgn0113730 FBgn0091577 CPIJ004615 BGIBMGA003112 ACYPI006837 GB10288 AGAP009919 AAEL017204 PB19899 PHUM465400 GLEAN_13542
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	38E.10 (McGill Drosophila Genome Project, 2001.9.25, Butler, 2001, Butler et al., 2001) CG9318 (Molnar et al., 2006, Bergeret et al., 2008, Liu and Lehmann, 2008, Villanyi et al., 2008, Anholt and Williams, 2010) TM9SF2 (Bergeret et al., 2008)
Name Synonym
Secondary FlyBase IDs
References ( 18 )
Research paper	Anholt and Williams, 2010, Chem. Senses 35(1): 21--30 The soluble proteome of the Drosophila antenna. [FBrf0209552] Bergeret et al., 2008, J. Cell Sci. 121(20): 3325--3334 TM9SF4 is required for Drosophila cellular immunity via cell adhesion and phagocytosis. [FBrf0206066] Liu and Lehmann, 2008, Insect Molec. Biol. 17(2): 91--101 Genes and biological processes controlled by the Drosophila FOXA orthologue Fork head. [FBrf0204414] Villanyi et al., 2008, Mech. Dev. 125(9-10): 822--831 The DRE motif is a key component in the expression regulation of the importin-beta encoding Ketel gene in Drosophila. [FBrf0207232] Molnar et al., 2006, Genetics 174(3): 1635--1659 A gain-of-function screen identifying genes required for vein formation in the Drosophila melanogaster wing. [FBrf0195387] Butler et al., 2001, Genetics 158(4): 1597--1614 Map position and expression of the genes in the 38 region of Drosophila. [FBrf0138405]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Dietzl et al., 2007, Nature 448(7150): Supplementary Table 1. [FBrf0202579] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452] Oh et al., 2003, Genetics 163(1): Table S1. [FBrf0157097] Butler, 2001, Genetics 158(4): Supplemental Material 3. Gene predictions and transcripts of the cytological region 38. [FBrf0139854]
Personal communication to FlyBase	FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] McGill Drosophila Genome Project, 2001.9.25, FASTA sequences of Gene Predictions of the 38 region. FASTA sequences of Gene Predictions of the 38 region. [FBrf0139855]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]