FlyBase Gene Report: Dmel\Dhx15

SPLICEOSOME COMPLEX A -: Nuclear pre-mRNA splicing is catalyzed by the spliceosome which assembles in a step-wise manner. Complex A, the pre-spliceosome, is composed of U1 and U2 snRNPs and proteins involved in recognition of the 5' splice site and branch point. (Adapted from PMID:24452469 and PMID:23118483).
SPLICEOSOME COMPLEX B -: Nuclear pre-mRNA splicing is catalyzed by the spliceosome which assembles in a step-wise manner. After the assembly of complex A on pre-mRNA, the U4-U6 and U5 snRNPs are recruited as a preassembled tri-snRNP to form complex B. U5 snRNP binds exons at the 5' site. (Adapted from PMID:24452469 and PMID:23118483).

Gene Model and Products

Number of Transcripts

Number of Unique Polypeptides

Please see the GBrowse view of Dmel\Dhx15 or the JBrowse view of Dmel\Dhx15 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Comments on Gene Model

Low-frequency RNA-Seq exon junction(s) not annotated.

Gene model reviewed during 5.48

Sequence Ontology: Class of Gene

nuclear_gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

Dhx15-RA

FBtr0088966

NM_136425

2747

729

Dhx15-RB

FBtr0336909

NM_001273837

2610

729

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

Dhx15-PA

FBpp0088040

82.7

729

7.07

NP_610269

AAF59269

Dhx15-PB

FBpp0307849

82.7

729

7.07

NP_001260766

AGB93299

Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

729 aa isoforms: Dhx15-PA, Dhx15-PB

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

UniProt

Q7K3M5

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Dhx15 using the Feature Mapper tool.

External Data

Crossreferences

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Linkouts

Gene Ontology (8 terms)

Molecular Function (3 terms)

Terms Based on Experimental Evidence (0 terms)

Terms Based on Predictions or Assertions (3 terms)

CV Term

Evidence

References

ATP binding

inferred from electronic annotation with InterPro:IPR011545

(assigned by InterPro )

(FlyBase Curators et al., 2004-)

RNA binding

inferred from biological aspect of ancestor with PANTHER:PTN000433338

(assigned by GO_Central )

(Gaudet et al., 2011)

RNA helicase activity

inferred from sequence or structural similarity with SGD:S000003088

(Lasko, 2000, Mount and Salz, 2000)

inferred from sequence or structural similarity

(Liang and Biggin, 1998)

Biological Process (2 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

positive regulation of p38MAPK cascade

inferred from genetic interaction with FLYBASE:p38a; FB:FBgn0015765

(Mosallanejad et al., 2014)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

mRNA splicing, via spliceosome

inferred from sequence or structural similarity with SGD:S000003088

(Mount and Salz, 2000)

inferred by curator from GO:0071011,GO:0071013

(Herold et al., 2009)

Cellular Component (3 terms)

Terms Based on Experimental Evidence (2 terms)

CV Term

Evidence

References

catalytic step 2 spliceosome

inferred from high throughput direct assay

(Herold et al., 2009)

precatalytic spliceosome

inferred from high throughput direct assay

(Herold et al., 2009)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

spliceosomal complex

inferred from sequence or structural similarity with SGD:S000003088

(Mount and Salz, 2000)

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 1 -- 3

organism | ubiquitous

Comment: maternally deposited

(Fisher et al., 2012)

embryonic stage 4 -- 6

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 7 -- 8

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 9 -- 10

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 11 -- 12

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 13 -- 16

embryonic/larval midgut

(Fisher et al., 2012)

gonad

(Fisher et al., 2012)

organism | faint | ubiquitous

(Fisher et al., 2012)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

adult stage

adult head

• membrane

(Aradska et al., 2015)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

catalytic step 2 spliceosome

inferred from high throughput direct assay

(Herold et al., 2009)

precatalytic spliceosome

inferred from high throughput direct assay

(Herold et al., 2009)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\Dhx15 in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\Dhx15

View exonic expression by tissue for Dmel\Dhx15

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0033160

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0033160

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG11107-RA

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG11107

Flygut - An atlas of the Drosophila adult midgut

FBgn0033160

Images

FlyExpress - Embryonic expression images (BDGP data)

Show all FlyExpress processed images for Dmel\Dhx15

Stages(s) 1-3
Stages(s) 4-6
Stages(s) 9-10
Stages(s) 11-12
Stages(s) 13-16

FlyBase Wiki

Image Based Resources

Alleles, Insertions, and Transgenic Constructs

Classical and Insertion Alleles ( 6 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 5 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of Dhx15

Transgenic constructs containing regulatory region of Dhx15

Deletions and Duplications ( 0 )

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

lethal

Dhx15^GD7199

partially lethal - majority die, with Scer\GAL4^pnr-MD237

Dhx15^GD7199

viable, with Dcr-2^UAS.cDa, Scer\GAL4^elav.PLu

Dhx15^GD7199

viable, with Scer\GAL4^Mef2.PR

Dhx15^GD7199

viable, with Scer\GAL4^tin.CΔ4

Dhx15^GD7199

Other Phenotypes

Allele

body color defective, with Scer\GAL4^pnr-MD237

Dhx15^GS11266

flight defective, with Scer\GAL4^Mef2.PR

Dhx15^GD7199

neuroanatomy defective | larval stage

Dhx15^GD7199

some die during pupal stage, with Scer\GAL4^pnr-MD237

Dhx15^GD7199

visible, with Scer\GAL4^pnr-MD237

Dhx15^GD7199

Phenotype manifest in

Allele

adult cuticle, with Scer\GAL4^pnr-MD237

Dhx15^GS11266

ganglion mother cell | larval stage

Dhx15^GD7199

larval neuroblast | larval stage

Dhx15^GD7199

mesothoracic tergum, with Scer\GAL4^pnr-MD237

Dhx15^GD7199

Orthologs

Downloads

Download All DIOPT Orthologs

Download All OrthoDB Orthologs

Human Orthologs (via DIOPT v7.1)

Homo sapiens (Human) (10)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Hsap\DHX15

15 of 15

Yes

3 of 15

3 of 15

3 of 15

2 of 15

2 of 15

Yes

Hsap\DHX33

2 of 15

Hsap\DQX1

2 of 15

Yes

Hsap\DAXX

1 of 15

Hsap\DHX40

1 of 15

Model Organism Orthologs (via DIOPT v7.1)

Mus musculus (laboratory mouse) (8)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

Mmus\Dhx15

15 of 15

Yes

3 of 15

3 of 15

3 of 15

2 of 15

Yes

Mmus\Dhx33

2 of 15

Mmus\Dhx38

2 of 15

Mmus\Dqx1

2 of 15

Yes

Rattus norvegicus (Norway rat) (10)

Rnor\Dhx15

13 of 13

Yes

3 of 13

3 of 13

2 of 13

2 of 13

Yes

Rnor\Dhx33

2 of 13

Rnor\Dqx1

2 of 13

Yes

Rnor\Dhx8

1 of 13

Rnor\Dhx40

1 of 13

Rnor\LOC100910750

1 of 13

Yes

Xenopus tropicalis (Western clawed frog) (6)

Xtro\dhx15

8 of 12

Yes

2 of 12

1 of 12

1 of 12

1 of 12

1 of 12

Danio rerio (Zebrafish) (10)

Drer\dhx15

14 of 15

Yes

Drer\dhx8

3 of 15

Drer\dhx16

2 of 15

Drer\dhx32a

2 of 15

Yes

Drer\dhx32b

2 of 15

Yes

2 of 15

2 of 15

1 of 15

1 of 15

1 of 15

Caenorhabditis elegans (Nematode, roundworm) (7)

Cele\ddx-15

13 of 15

Yes

3 of 15

3 of 15

3 of 15

2 of 15

2 of 15

1 of 15

Yes

Arabidopsis thaliana (thale-cress) (11)

Atha\AT2G47250

9 of 9

Yes

Atha\AT3G62310

9 of 9

Yes

Atha\AT3G26560

2 of 9

Atha\AT4G16680

2 of 9

Atha\AT5G14900

2 of 9

Yes

2 of 9

2 of 9

2 of 9

1 of 9

1 of 9

1 of 9

Saccharomyces cerevisiae (Brewer's yeast) (5)

Scer\PRP43

14 of 15

Yes

4 of 15

3 of 15

2 of 15

2 of 15

Schizosaccharomyces pombe (Fission yeast) (6)

Spom\prp43

12 of 12

Yes

2 of 12

2 of 12

2 of 12

2 of 12

2 of 12

Orthologs in Drosophila Species (via OrthoDB v9.1) ( EOG09190333 )

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila melanogaster

fruit fly

Dmel\Dhx15

Drosophila suzukii

Spotted wing Drosophila

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA10763

Drosophila persimilis

Dper\GL11162

Drosophila willistoni

Dwil\GK21317

Drosophila virilis

Dvir\GJ21780

Drosophila mojavensis

Dmoj\GI18757

Drosophila grimshawi

Dgri\GH21159

Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG091501WU )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Musca domestica

House fly

Mdoa\17018260

Glossina morsitans

Tsetse fly

Gmor\GMOY009091

Lucilia cuprina

Australian sheep blowfly

Lcup\FF38_09346

Mayetiola destructor

Hessian fly

Mdes\Mdes011106

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL004419

Anopheles darlingi

American malaria mosquito

Adar\ADAC007823

Anopheles gambiae

Malaria mosquito

Agam\AGAP011149

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ008192

Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W01KW )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Bombyx mori

Silkmoth

Bmor\BGIBMGA009578

Danaus plexippus

Monarch butterfly

Dple\DPOGS214457-PA

Danaus plexippus

Monarch butterfly

Dple\DPOGS214458-PA

Heliconius melpomene

Postman butterfly

Hmel\HMEL007792

Apis florea

Little honeybee

Aflo\2354231908

Apis mellifera

Western honey bee

Amel\LOC551824

Bombus impatiens

Common eastern bumble bee

Bimp\BIMP15633

Bombus terrestris

Buff-tailed bumblebee

Bter\15210795

Linepithema humile

Argentine ant

Lhum\LH21698

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:0031ce

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG001012

Dendroctonus ponderosae

Mountain pine beetle

Dpod\YQE_04569

Tribolium castaneum

Red flour beetle

Tcas\TC000481

Pediculus humanus

Human body louse

Phum\PHUM227550

Cimex lectularius

Bed bug

Clec\CLEC013452

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI007670

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_09302

Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X01IT )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strigamia maritima

European centipede

Smar\SMAR006548

Stegodyphus mimosarum

African social velvet spider

Smim\KFM61791.1

Tetranychus urticae

Two-spotted spider mite

Turt\tetur10g02010

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_198525

Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G030Q )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strongylocentrotus purpuratus

Purple sea urchin

Spur\Sp-Dhx15

Strongylocentrotus purpuratus

Purple sea urchin

Spur\Sp-Dhx33

Strongylocentrotus purpuratus

Purple sea urchin

Spur\Sp-Dhx8

Strongylocentrotus purpuratus

Purple sea urchin

Spur\Sp-Dhx33_1

Strongylocentrotus purpuratus

Purple sea urchin

Spur\Sp-Dhx16_2

Strongylocentrotus purpuratus

Purple sea urchin

Spur\Sp-Dhx16_1

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_017153gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\Sp-Dhx38

Ciona intestinalis

Vase tunicate

Cint\LOC100185433

Ciona intestinalis

Vase tunicate

Cint\ENSCING00000003597

Ciona intestinalis

Vase tunicate

Cint\LOC100177581

Ciona intestinalis

Vase tunicate

Cint\ENSCING00000002654

Ciona intestinalis

Vase tunicate

Cint\LOC100175470

Gallus gallus

Domestic chicken

Ggal\DHX38

Gallus gallus

Domestic chicken

Ggal\DHX15

Gallus gallus

Domestic chicken

Ggal\LOC771596

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v7.1)

Drosophila melanogaster (Fruit fly) (13)

Gene Symbol

Score

Source

Alignment

5 of 10

5 of 10

5 of 10

pea

5 of 10

4 of 10

2 of 10

2 of 10

1 of 10

1 of 10

1 of 10

mle

1 of 10

Rhau

1 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Comments on Models/Modifiers Based on Experimental Evidence ( 0 )

Disease Associations of Human Orthologs (via DIOPT v7.1 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

DHX15; DEAH-box helicase 15

15 of 15

603403

DHX16; DEAH-box helicase 16

3 of 15

603405

DHX35; DEAH-box helicase 35

3 of 15

DHX38; DEAH-box helicase 38

3 of 15

605584

RETINITIS PIGMENTOSA 84; RP84

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

Dhx15 - Atx2

experimental knowledge based

(Guruharsha et al., 2011)

Dhx15 - CG31550

experimental knowledge based

(Guruharsha et al., 2011)

Dhx15 - CG6701

experimental knowledge based

(Guruharsha et al., 2011)

Dhx15 - CG7878

experimental knowledge based

(Guruharsha et al., 2011)

Dhx15 - Srp54

experimental knowledge based

(Guruharsha et al., 2011)

Dhx15 - Tdrd3

experimental knowledge based

(Guruharsha et al., 2011)

Dhx15 - larp

experimental knowledge based

(Guruharsha et al., 2011)

Dhx15 - nito

experimental knowledge based

(Guruharsha et al., 2011)

Summary of Genetic Interactions

esyN Network Diagram

esyN Network Key:

Suppression

Enhancement

View in Interactions Browser

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Dhx15

suppressible

p38a

(Mosallanejad et al., 2014)

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

External Data

Linkouts

BioGRID - A database of protein and genetic interactions.

61535

DroID - A comprehensive database of gene and protein interactions.

FBgn0033160

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

35654

MIST (protein-protein) - An integrated Molecular Interaction Database

Dhx15

Pathways

Gene Group - Pathway Membership (FlyBase)

External Data

Linkouts

KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Genomic Location and Detailed Mapping Data

Chromosome (arm)

Recombination map

2-56

Cytogenetic map

43B2-43B2

Sequence location

2R:7,387,187..7,391,023 [+]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

43B2-43B2

Limits computationally determined from genome sequence between P{lacW}cos^k16101 and P{EP}CG1600^EP398

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

2-56

(FlyBase, 2016)

2-56.4

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (11)

Bloomington

43363

w^*; P{GSV1}Dhx15^C371/CyO

41654

y¹ v¹; P{TRiP.GL01236}attP2

12911

y¹; P{SUPor-P}Dhx15^KG02727/CyO; ry⁵⁰⁶

83200

y¹ w^*; TI{CRIMIC.TG4.1}Dhx15^{CR00917-TG4.1}

41992

y¹ sc^* v¹ sev²¹; P{TRiP.HMS02393}attP40

FlyORF

F001453

M{UAS-Dhx15.ORF}ZH-86Fb

Kyoto

123449

w¹¹¹⁸; P{RS3}Dhx15^CB-5084-3

126018

w¹¹¹⁸; P{RS5}Dhx15^5-SZ-3362

203200

y¹ w^67c23; P{GSV6}Dhx15^GS11266/SM1

111503

y^d2 w¹¹¹⁸ P{ey-FLP.N}2 P{5xglBS-lacZ.38-1}TPN1; P{neoFRT}42D P{SUPor-P}Dhx15^KG02727 /CyO y⁺

VDRC

v44119

w¹¹¹⁸; P{GD7199}v44119/CyO

Genomic Clones (17)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (89)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequences

BDGP DGC clones

GM13272

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0033160

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

Other clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0033160

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

35654

Antibody Information

Laboratory Generated Antibodies

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for identity of: Dhx15 CG11107

(Mosallanejad et al., 2014)

Source for database merge of

Source for merge of: CG11107 anon- EST:Liang-1.18

(Ashburner, 2004.6.30)

Additional comments

Other Comments

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 43 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

35654

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

Q7K3M5

Other crossreferences

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0033160

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0033160

Eukaryotic Promoter Database - A collection of databases of experimentally validated promoters for selected model organisms.

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG11107

Flygut - An atlas of the Drosophila adult midgut

FBgn0033160

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

35654

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC000481

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG11107

KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.

Spliceosome

modMine - A data warehouse for the modENCODE project

FBgn0033160

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

mRNA Splicing - Major Pathway

Linkouts

ApoDroso - Functional genomic database for photoreceptor development, survival and function

12911-CG11107[KG02727]

BioGRID - A database of protein and genetic interactions.

61535

DroID - A comprehensive database of gene and protein interactions.

FBgn0033160

DRSC - Results frm RNAi screens

FBgn0033160

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0033160

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG11107-RA

FlyMine - An integrated database for Drosophila genomics

FBgn0033160

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

35654

KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.

Spliceosome

MIST (protein-protein) - An integrated Molecular Interaction Database

Dhx15

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

mRNA Splicing - Major Pathway

Synonyms and Secondary IDs (8)

Reported As

Symbol Synonym

CG11107

(Çiçek et al., 2016, Lee et al., 2016, Kwong et al., 2015, Mosallanejad et al., 2014, de Celis et al., 2013.9.11, Schertel et al., 2013, Japanese National Institute of Genetics, 2012.5.21, Friedman et al., 2011, Neumüller et al., 2011, Ni et al., 2010.12.1, Herold et al., 2009, Molnar et al., 2006, Liebl and Featherstone, 2005)

DHX15

(Mosallanejad et al., 2014)

Dhx15

(Gene Disruption Project members, 2018-, Mosallanejad et al., 2014)

anon-EST:Liang-1.18

cg11107

(Lasko, 2000)

clone 1.18

(Liang and Biggin, 1998)

Name Synonyms

DEAH-box helicase 15

DHX15 ortholog

Secondary FlyBase IDs

FBgn0026004

Datasets (0)

Study focus (0)

Experimental Role

Project

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Title

References (49)

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