FlyBase Gene Report: Dmel\eIF3m

General Information

Symbol

Dmel\eIF3m

Species

D. melanogaster

Name

eukaryotic translation initiation factor 3 subunit m

Annotation Symbol

CG8309

Feature Type

protein_coding_gene

FlyBase ID

FBgn0033902

Gene Model Status

Stock Availability

8 publicly available

Gene Snapshot

eukaryotic translation initiation factor 3 subunit m (eIF3m) encodes a non core component of the EIF3 translation initiation factor. The product of eIF3m functions during caspase mediated remodeling of the syncytial testis, where it interacts with the apoptosome. [Date last reviewed: 2019-03-07]

Other Summaries

Alliance
Auto summary
Gene Group
UniProtKB
Interactive Fly

Also Known As

Tango7

Key Links

Genomic Location

Cytogenetic map

Sequence location

2R:14,163,066..14,164,825 [-]

Recombination map

2-69

RefSeq locus

NT_033778 REGION:14163066..14164825

Sequence

Get Decorated FASTA

Genomic Maps

JBrowse GBrowse

Other Genome Views

The following external sites may use different assemblies or annotations than FlyBase.

Function

GO Summary Ribbons

Gene Ontology (GO) Annotations (14 terms)

Molecular Function (3 terms)

Terms Based on Experimental Evidence (1 term)

CV Term

Evidence

References

enables caspase binding

inferred from physical interaction with FLYBASE:Dronc; FB:FBgn0026404, FLYBASE:Dark; FB:FBgn0263864

(D'Brot et al., 2013)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

enables translation initiation factor activity

inferred from electronic annotation with InterPro:IPR027528

(assigned by InterPro )

(FlyBase Curators et al., 2004-)

enables translation initiation factor binding

inferred from sequence or structural similarity with MGI:MGI:1351744

(FlyBase Curators, 2008--)

Biological Process (7 terms)

Terms Based on Experimental Evidence (5 terms)

CV Term

Evidence

References

involved_in activation of cysteine-type endopeptidase activity

inferred from direct assay

(D'Brot et al., 2013)

inferred from mutant phenotype

(D'Brot et al., 2013)

involved_in Golgi organization

inferred from mutant phenotype

(Bard et al., 2006)

involved_in positive regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis

inferred from mutant phenotype

(Chew et al., 2009)

involved_in protein secretion

inferred from mutant phenotype

(Bard et al., 2006)

involved_in sperm individualization

inferred from mutant phenotype

(D'Brot et al., 2013)

Terms Based on Predictions or Assertions (2 terms)

CV Term

Evidence

References

involved_in cytoplasmic translational initiation

inferred from biological aspect of ancestor with PANTHER:PTN000394291

(assigned by GO_Central )

(Gaudet et al., 2011)

involved_in translation

inferred from sequence or structural similarity with MGI:MGI:1351744

(FlyBase Curators, 2008--)

Cellular Component (4 terms)

Terms Based on Experimental Evidence (3 terms)

CV Term

Evidence

References

located_in cytosol

inferred from direct assay

(Bard et al., 2006)

located_in Golgi apparatus

inferred from direct assay

(Bard et al., 2006)

part_of investment cone

inferred from direct assay

(D'Brot et al., 2013)

Terms Based on Predictions or Assertions (1 term)

CV Term

Evidence

References

part_of eukaryotic translation initiation factor 3 complex

inferred from biological aspect of ancestor with PANTHER:PTN000394291

(assigned by GO_Central )

(Gaudet et al., 2011)

inferred from sequence or structural similarity with MGI:MGI:1351744

(FlyBase Curators, 2008--)

Gene Group (FlyBase)

CYTOPLASMIC TRANSLATION INITIATION FACTORS

Protein Family (UniProt)

Belongs to the eIF-3 subunit M family. (Q7JVI3)

Protein Signatures (InterPro)

Summaries

Gene Group (FlyBase)

CYTOPLASMIC TRANSLATION INITIATION FACTORS -: Cytoplasmic (or eukaryotic) translation initiation factors function in the initiation stage of ribosome-mediated translation in the cytoplasm. (Adapted from FBrf0233552 and PMID:20094052).

Protein Function (UniProtKB)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (Potential).

(UniProt, Q7JVI3)

Gene Model and Products

Number of Transcripts

2

Number of Unique Polypeptides

1

Please see the JBrowse view of Dmel\eIF3m for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)

Isoform displayed:

Pfam protein domains

InterPro name

classification

start

end

Protein Domains (via SMART)

Isoform displayed:

SMART protein domains

InterPro name

classification

start

end

Comments on Gene Model

Gene model reviewed during 5.50

Sequence Ontology: Class of Gene

protein_coding_gene

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Assoc. CDS (aa)

FBtr0087579

1590

387

FBtr0339964

1386

387

Additional Transcript Data and Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank

FBpp0086705

44.1

387

5.45

FBpp0308985

44.1

387

5.45

Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

387 aa isoforms: eIF3m-PA, eIF3m-PB

Additional Polypeptide Data and Comments

Reported size (kDa)

Comments

External Data

Subunit Structure (UniProtKB)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex. The eIF-3 complex interacts with pix.

(UniProt, Q7JVI3)

Crossreferences

InterPro - A database of protein families, domains and functional sites

Linkouts

Sequences Consistent with the Gene Model

Nucleotide / Polypeptide Records

Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\eIF3m using the Feature Mapper tool.

External Data

Crossreferences

Linkouts

Expression Data

Expression Summary Ribbons

Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.

For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.

Transcript Expression

in situ

Stage

Tissue/Position (including subcellular localization)

Reference

embryonic stage 1 -- 3

Comment: maternally deposited

(Fisher et al., 2012)

embryonic stage 4 -- 6

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 7 -- 8

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 9 -- 10

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 11 -- 12

organism | ubiquitous

(Fisher et al., 2012)

embryonic stage 13 -- 16

embryonic hindgut

(Fisher et al., 2012)

embryonic/larval midgut

(Fisher et al., 2012)

organism | ubiquitous

(Fisher et al., 2012)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

mass spectroscopy

Stage

Tissue/Position (including subcellular localization)

Reference

• membrane

(Aradska et al., 2015)

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Evidence

References

located_in cytosol

inferred from direct assay

(Bard et al., 2006)

located_in Golgi apparatus

inferred from direct assay

(Bard et al., 2006)

part_of investment cone

inferred from direct assay

(D'Brot et al., 2013)

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\eIF3m in GBrowse 2

RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region

View exonic expression by developmental stage for Dmel\eIF3m

View exonic expression by tissue for Dmel\eIF3m

Bulk Downloads

RNA-Seq RPKM values for all genes

Reference

See Gelbart and Emmert, 2013 for analysis details and data files for all genes.

Developmental Proteome: Life Cycle

Developmental Proteome: Embryogenesis

External Data and Images

Linkouts

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0033902

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0033902

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG8309-RA

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG8309

Flygut - An atlas of the Drosophila adult midgut

FBgn0033902

Images

FlyExpress - Embryonic expression images (BDGP data)

Show all FlyExpress processed images for Dmel\eIF3m

Stages(s) 4-6
Stages(s) 13-16

Image Based Resources

Alleles, Insertions, and Transgenic Constructs

Classical and Insertion Alleles ( 3 )

For All Classical and Insertion Alleles Show

Other relevant insertions

Transgenic Constructs ( 10 )

For All Alleles Carried on Transgenic Constructs Show

Transgenic constructs containing/affecting coding region of eIF3m

Transgenic constructs containing regulatory region of eIF3m

Deletions and Duplications ( 1 )

Disrupted in

(Ryder, 2004.4.26)

Phenotypes

For more details about a specific phenotype click on the relevant allele symbol.

Lethality

Allele

lethal - all die before end of first instar larval stage

eIF3m^E

lethal - all die before end of first instar larval stage (with Df(2R)Exel7130)

eIF3m^E

partially lethal - majority live (with Df(2R)Exel7130)

eIF3m^L

partially lethal - majority live (with eIF3m^E)

eIF3m^L

partially lethal - majority live (with eIF3m^L)

eIF3m^E

eIF3m^L

Sterility

Allele

eIF3m^L

male sterile (with Df(2R)Exel7130)

eIF3m^L

male sterile (with eIF3m^E)

eIF3m^L

male sterile (with eIF3m^L)

eIF3m^E

Other Phenotypes

Allele

short lived (with eIF3m^E)

eIF3m^L

short lived (with eIF3m^L)

eIF3m^E

visible | adult stage

eIF3m^L

visible | adult stage (with Df(2R)Exel7130)

eIF3m^L

visible | adult stage (with eIF3m^E)

eIF3m^L

visible | adult stage (with eIF3m^L)

eIF3m^E

Phenotype manifest in

Allele

eIF3m^L

cystic bulge (with eIF3m^E)

eIF3m^L

cystic bulge (with eIF3m^L)

eIF3m^E

investment cone

eIF3m^L

investment cone (with eIF3m^E)

eIF3m^L

investment cone (with eIF3m^L)

eIF3m^E

eIF3m^L

wing (with Df(2R)Exel7130)

eIF3m^L

wing (with eIF3m^E)

eIF3m^L

wing (with eIF3m^L)

eIF3m^E

Orthologs

Downloads

Download All DIOPT Orthologs

Download All OrthoDB Orthologs

Human Orthologs (via DIOPT v8.0)

Homo sapiens (Human) (1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

13 of 15

Yes

Yes

Model Organism Orthologs (via DIOPT v8.0)

Mus musculus (laboratory mouse) (1)

Species\Gene Symbol

Score

Best Score

Best Reverse Score

Source

Alignment

Complementation?

Transgene?

12 of 15

Yes

Yes

Rattus norvegicus (Norway rat) (1)

12 of 13

Yes

Yes

Xenopus tropicalis (Western clawed frog) (1)

12 of 12

Yes

Yes

Danio rerio (Zebrafish) (2)

13 of 15

Yes

Yes

Drer\zgc:114126

2 of 15

No

Yes

Caenorhabditis elegans (Nematode, roundworm) (1)

12 of 15

Yes

Yes

Arabidopsis thaliana (thale-cress) (2)

9 of 9

Yes

Yes

9 of 9

Yes

Yes

Saccharomyces cerevisiae (Brewer's yeast) (1)

1 of 15

Yes

No

Schizosaccharomyces pombe (Fission yeast) (1)

Spom\SPAC1751.03

10 of 12

Yes

Yes

Ortholog(s) in Drosophila Species (via OrthoDB v9.1) ( EOG0919098N )

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila suzukii

Spotted wing Drosophila

Dsuz\DS10_00002488

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Drosophila persimilis

Drosophila willistoni

Drosophila virilis

Drosophila mojavensis

Drosophila grimshawi

Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG091505YT )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Musca domestica

House fly

Glossina morsitans

Tsetse fly

Gmor\GMOY000129

Lucilia cuprina

Australian sheep blowfly

Lcup\FF38_13724

Mayetiola destructor

Hessian fly

Mdes\Mdes007936

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL004347

Anopheles darlingi

American malaria mosquito

Adar\ADAC005299

Anopheles gambiae

Malaria mosquito

Agam\AGAP012281

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ010525

Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W06HM )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Bombyx mori

Silkmoth

Bmor\BGIBMGA000903

Danaus plexippus

Monarch butterfly

Dple\DPOGS211952-PA

Heliconius melpomene

Postman butterfly

Hmel\HMEL017774

Apis florea

Little honeybee

Aflo\2147486689

Apis mellifera

Western honey bee

Bombus impatiens

Common eastern bumble bee

Bombus terrestris

Buff-tailed bumblebee

Linepithema humile

Argentine ant

Megachile rotundata

Alfalfa leafcutting bee

Mrot\MROTU:000c23

Nasonia vitripennis

Parasitic wasp

Nvit\Nasvi2EG013384

Dendroctonus ponderosae

Mountain pine beetle

Tribolium castaneum

Red flour beetle

Pediculus humanus

Human body louse

Phum\PHUM544800

Rhodnius prolixus

Kissing bug

Rpro\RPRC009587

Cimex lectularius

Bed bug

Clec\CLEC005457

Cimex lectularius

Bed bug

Clec\CLEC003938

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI001732

Zootermopsis nevadensis

Nevada dampwood termite

Znev\Znev_10138

Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X0AU0 )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strigamia maritima

European centipede

Smar\SMAR005822

Ixodes scapularis

Black-legged tick

Isca\ISCW005874

Stegodyphus mimosarum

African social velvet spider

Smim\KFM63377.1

Tetranychus urticae

Two-spotted spider mite

Turt\tetur14g01150

Tetranychus urticae

Two-spotted spider mite

Turt\tetur26g00940

Daphnia pulex

Water flea

Dpux\DAPPUDRAFT_303014

Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G0H3D )

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_000678gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_005175gn

Strongylocentrotus purpuratus

Purple sea urchin

Ciona intestinalis

Vase tunicate

Cint\LOC100181765

Gallus gallus

Domestic chicken

Paralogs

Downloads

Download All DIOPT Paralogs

Paralogs (via DIOPT v8.0)

Drosophila melanogaster (Fruit fly) (1)

Gene Symbol

Score

Source

Alignment

2 of 10

Human Disease Associations

FlyBase Human Disease Model Reports

Disease Model Summary Ribbon

Disease Ontology (DO) Annotations

Models Based on Experimental Evidence ( 0 )

Allele

Disease

Evidence

References

Potential Models Based on Orthology ( 0 )

Human Ortholog

Disease

Evidence

References

Modifiers Based on Experimental Evidence ( 0 )

Allele

Disease

Interaction

References

Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)

Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.

Homo sapiens (Human)

Gene name

Score

OMIM

OMIM Phenotype

DO term

Complementation?

Transgene?

EIF3M; eukaryotic translation initiation factor 3 subunit M

13 of 15

Functional Complementation Data

Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.

Interactions

Summary of Physical Interactions

esyN Network Diagram

Interactions Browser

View in Interactions Browser

Please see the Physical Interaction reports below for full details

protein-protein

Physical Interaction

Assay

References

anti tag coimmunoprecipitation, anti tag western blot

(D'Brot et al., 2013)

anti tag coimmunoprecipitation, anti tag western blot

(D'Brot et al., 2013)

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Vinayagam et al., 2016)

eIF3m - Pi3K92E

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Vinayagam et al., 2016)

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Vinayagam et al., 2016)

pull down, peptide massfingerprinting

(Ramel et al., 2013)

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Vinayagam et al., 2016)

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Vinayagam et al., 2016)

experimental knowledge based

(Guruharsha et al., 2011)

experimental knowledge based

(Guruharsha et al., 2011)

experimental knowledge based

(Guruharsha et al., 2011)

experimental knowledge based

(Guruharsha et al., 2011)

experimental knowledge based

(Guruharsha et al., 2011)

experimental knowledge based

(Guruharsha et al., 2011)

experimental knowledge based

(Guruharsha et al., 2011)

experimental knowledge based

(Guruharsha et al., 2011)

experimental knowledge based

(Guruharsha et al., 2011)

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Vinayagam et al., 2016)

anti tag coimmunoprecipitation, Identification by mass spectrometry

(Vinayagam et al., 2016)

anti tag coimmunoprecipitation, peptide massfingerprinting, pull down, western blot

(Handu et al., 2015)

Summary of Genetic Interactions

esyN Network Diagram

esyN Network Key:

Suppression

Enhancement

View in Interactions Browser

Please look at the allele data for full details of the genetic interactions

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

Starting gene(s)

Interaction type

Interacting gene(s)

Reference

suppressible

(Sen et al., 2013)

External Data

Subunit Structure (UniProtKB)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex. The eIF-3 complex interacts with pix.

(UniProt, Q7JVI3 )

Linkouts

BioGRID - A database of protein and genetic interactions.

62316

DroID - A comprehensive database of gene and protein interactions.

FBgn0033902

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

36565

MIST (protein-protein) - An integrated Molecular Interaction Database

Tango7

Pathways

Signaling Pathways (FlyBase)

Metabolic Pathways

External Data

Linkouts

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Genomic Location and Detailed Mapping Data

Chromosome (arm)

2R

Recombination map

2-69

Cytogenetic map

Sequence location

2R:14,163,066..14,164,825 [-]

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

50E1-50E1

Limits computationally determined from genome sequence between P{lacW}mam^k05821 and P{lacW}l(2)s3475^s3475&P{lacW}Hsc70-5^k04907

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

2-69

(FlyBase, 2016)

2-74.5

(Comeron et al., 2012)

Left of (cM)

Right of (cM)

Notes

Stocks and Reagents

Stocks (8)

32879

y¹ sc^* v¹ sev²¹; P{TRiP.HMS00667}attP2

67908

y¹ sc^* v¹ sev²¹; P{TRiP.HMS05756}attP40

85974

w¹¹¹⁸; PBac{PB}eIF3m^c05501; l(3)*^*/TM6B, Tb¹

F001362

M{UAS-eIF3m.ORF}ZH-86Fb

F001050

M{UAS-eIF3m.ORF.3xHA}ZH-86Fb

v330265

P{VSH330265}attP40

v110359

P{KK100985}VIE-260B

v318346

PBac{fTRG01373.sfGFP-TVPTBF}VK00033

Genomic Clones (16)

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones (136)

Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA clones, fully sequenced

BDGP DGC clones

LD23767

Other clones

Drosophila Genomics Resource Center cDNA clones

For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

FBgn0033902

cDNA Clones, End Sequenced (ESTs)

BDGP DGC clones

RNAi and Array Information

Linkouts

DRSC - Results frm RNAi screens

FBgn0033902

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

36565

Antibody Information

Laboratory Generated Antibodies

monoclonal

(D'Brot et al., 2013)

Commercially Available Antibodies

Other Information

Relationship to Other Genes

Source for database identify of

Source for identity of: Tango7 CG8309

(Bard et al., 2006)

Source for identity of: eIF3m Tango7

(Marygold et al., 2017)

Source for database merge of

Source for merge of: CG8309 anon- EST:Posey76

(Bayraktaroglu, 2000.11.2)

Source for merge of: CG8309 anon- EST:Posey67

(Ashburner, 2004.6.30)

Additional comments

Other Comments

dsRNA directed against this gene has been used in a screen for genes required for constitutive protein secretion.

(Bard et al., 2006)

dsRNA directed against Tango7 inhibits protein secretion in S2 cells and results in the Golgi membranes fragmenting into smaller elements in more than 50% of the treated cells.

(Bard et al., 2006)

Origin and Etymology

Discoverer

Etymology

Identification

External Crossreferences and Linkouts ( 43 )

Sequence Crossreferences

NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.

36565

GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.

GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.

RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.

UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information

Q7JVI3

UniProt/TrEMBL - Automatically annotated and unreviewed records of protein sequence and functional information

A0A0B4LFB3

Other crossreferences

BDGP expression data - Patterns of gene expression in Drosophila embryogenesis

FBgn0033902

Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones

FBgn0033902

Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns

CG8309

Flygut - An atlas of the Drosophila adult midgut

FBgn0033902

GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents

36565

iBeetle-Base - RNAi phenotypes in the red flour beetle (Tribolium castaneum)

TC011022

InterPro - A database of protein families, domains and functional sites

KEGG Genes - Molecular building blocks of life in the genomic space.

Dmel_CG8309

modMine - A data warehouse for the modENCODE project

FBgn0033902

Linkouts

BioGRID - A database of protein and genetic interactions.

62316

DroID - A comprehensive database of gene and protein interactions.

FBgn0033902

DRSC - Results frm RNAi screens

FBgn0033902

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

FBgn0033902

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

CG8309-RA

FlyCyc Genes - Genes from a BioCyc PGDB for Dmel

FBGN0033902

FlyMine - An integrated database for Drosophila genomics

FBgn0033902

InterologFinder - Protein-protein interactions (PPI) from both known and predicted PPI data sets.

36565

MIST (protein-protein) - An integrated Molecular Interaction Database

Tango7

Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.

Synonyms and Secondary IDs (12)

Reported As

Symbol Synonym

CG8309

(Kolkhof et al., 2017, Marygold et al., 2017, Meadows, 2017.1.11, Rosa-Ferreira et al., 2015, Fukuoh et al., 2014, Ramel et al., 2013, Schertel et al., 2013, Yano et al., 2012, Müller et al., 2010, Ni et al., 2010.12.1, Keleman et al., 2009.8.5, Perkins et al., 2009, Hughes et al., 2008, Sepp et al., 2008, Bard et al., 2006, Ashburner, 2004.6.30)

TANGO7

(Bard et al., 2006)

Tango 7

(Bartkuhn et al., 2009)

Tango7

(Jin et al., 2020, Sarov et al., 2016, Yu et al., 2016, Bonke et al., 2013, D'Brot et al., 2013, Kwon et al., 2013, Ramel et al., 2013, Sen et al., 2013, Sen et al., 2013, Japanese National Institute of Genetics, 2012.5.21, Friedman et al., 2011, Lindquist et al., 2011, Dekanty et al., 2010, Müller et al., 2010, Chew et al., 2009)

Tng7

(D'Brot et al., 2013)

anon-EST:Posey67

anon-EST:Posey76

eIF3M

(Lindquist et al., 2011)

eIF3m

(Marygold et al., 2017, Majzoub et al., 2014)

tango7

(Kang et al., 2017, D'Brot et al., 2013)

Name Synonyms

Transport and Golgi organization 7

(Bard et al., 2006)

eukaryotic translation initiation factor 3 subunit m

Secondary FlyBase IDs

FBgn0027672
FBgn0063815

Datasets (0)

Study focus (0)

Experimental Role

Project

Project Type

Title

References (66)