• Home
• Tools
  • Tools Overview
  • Query Tools

    
    • QuickSearch
    • QueryBuilder
    • TermLink
    • CytoSearch
    • Interactions Browser
    • ImageBrowse
    • Find A Person
    • Google™ FlyBase
  • Genomic/Map Tools

    
    • BLAST
    • GBrowse
    • CytoSearch
    • Aberrations Maps
    • Chromosome Maps
    • Coordinates Converter
  • Retrieve/Convert

    
    • Batch Download
    • Coordinates Converter
    • ID Converter
  • Data Submission

    
    • Fast-Track Your Paper
    • Submit Personal Comm
    • Add A New Person
    • Update Person Info
  • People

    
    • Find A Person
    • Add A New Person
    • Update Person Info
• Files
  • Files Overview
  • Downloads:
  • Precomputed files
  • Archived data
  • Releases (FTP)
  • Genomes (FTP)
  • AAA data (FTP)
  • Lists:
  • Transposons (Dmel)
  • Transposons (other)
  • Vectors & Constructs
  • Anatomical Terms
  • Map Conversion
• Species
  • Phylogeny
  • Sequenced Species
  • Synteny Table
  • Color Illustrations
  • Abbreviations
• Documents
  • About FlyBase
  • Reference Manual:
  • Sections
  • Contents
  • Nomenclature
  • Release Notes
• Resources
  • All Resources
  • Model Organisms
  • Stock Collections
  • Other links:
  • BDGP
  • DGRC
  • FlyExpress
  • Interactive Fly
  • modENCODE
  • Textpresso for Fly
• News
  • News
  • FlyBase Forum
  • FlyBase Positions
  • Meetings
  • Courses
  • Fly Board
  • White papers
  • Funding
  • bionet.dros
• Help
  • Google™ FlyBase
  • Site Map
  • FAQs
  • FlyBase Guides
  • Video Tutorials
  • Report help
  • New to Flies
  • Pers. comm.
  • Author guidelines
  • Contact FlyBase
• Archives
  • Prior Release
  • Other Archives
  • Coordinate Converter

Gene Dmel\CG10139

General Information
Symbol	Dmel\CG10139	Species	D. melanogaster
Name		Annotation symbol	CG10139
Feature type	protein_coding_gene	FlyBase ID	FBgn0033951
Gene Model Status	Current	Stock availability	5 publicly available
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	51B7-51B7	Sequence location	2R:10,532,776..10,533,676 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG10139 (FBgn0033951). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 4 alleles are reported. The phenotypes of these alleles are annotated with: trichogen cell; mesothoracic tergum. It has one annotated transcript and one annotated polypeptide. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, larval/adult salivary gland, larval trachea, adult ovary, adult male reproductive system. Comments on Affy2 ProbeSet: ProbeSet 1640793_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG10139. Gene sequence location is 2R:10532776..10533676.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10	References FlyBase Curators, 2010-, Gene Ontology (GO) annotation review.
FB2012_01	Sequence features HFA05972 BKN24240
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 51B7-51B7   Limits computationally determined from genome sequence between P{lacW}ttvk03617&P{EP}ttvEP765 and P{lacW}Rpn6k00103
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG10139 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG10139-RA FBtr0087433  NM_137132   844   224
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG10139-PA   FBpp0086563   25.5   224   7.41     NP_610976   AAF58225
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE013599 AAF58225   AI106588   AI107937   AI387106   AI513215   AY047545 AAK77277   BI216455   BI367724   BI371822   BI372682   BI372761   BI571583   BI579235   BI617508   BI621676   BP546866   BP546897   BP558962   CO181121   CO272065   CO274283   CO274927   CO329797   CO344529   CZ467305   CZ467383   CZ467384   CZ470003   EC078879   EC083236   EC083510   EC195400   EC243340   EC256315   ES692986   ES692992   ES692993   ES693005   ES693017   ES693024   ES693033   ES693034   ES693036   ES693044   ES693055   ES693064   ES693082   ES693088   ES693090   ES693092   FE863167   FE863261   FE863297   GH739021   GH739781   GH740304   GH740369   GH741833   GH743295   GH743339   GH745156   GH745358   GH746005   GH746696   GH761930   GH764593   GH766059   GH768214   GH768361
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q7K5M2
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0033951    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0033951 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0033951 expression level Developmental Stage   Expression Level embryo 00-02hr    4360 embryo 02-04hr    5966 embryo 04-06hr    4117 embryo 06-08hr    4122 embryo 08-10hr    3935 embryo 10-12hr    3025 embryo 12-14hr    2124 embryo 14-16hr    1887 embryo 16-18hr    1852 embryo 18-20hr    1313 embryo 20-22hr    2571 embryo 22-24hr    2212 larva L1    1011 larva L2    721 larva L3 12hr old    626 larva L3 puffstage 1-2    942 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1508 white prepupae new    1507 white prepupae 12hr    1997 white prepupae 24hr    2008 pupae 2d postWPP    1386 pupae 3d postWPP    820 pupae 4d postWPP    815 adult male 01day    1056 adult male 05day    1243 adult male 30day    1058 adult female 01day    1114 adult female 05day    1681 adult female 30day    1700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4360) embryo 02-04hr  (5966) embryo 04-06hr  (4117) embryo 06-08hr  (4122) embryo 08-10hr  (3935) embryo 10-12hr  (3025) embryo 12-14hr  (2124) embryo 14-16hr  (1887) embryo 16-18hr  (1852) embryo 18-20hr  (1313) embryo 20-22hr  (2571) embryo 22-24hr  (2212) larva L1  (1011) larva L2  (721) larva L3 12hr old  (626) larva L3 puffstage 1-2  (942) larva L3 puffstage 3-6  (1239) larva L3 puffstage 7-9  (1508) white prepupae new  (1507) white prepupae 12hr  (1997) white prepupae 24hr  (2008) pupae 2d postWPP  (1386) pupae 3d postWPP  (820) pupae 4d postWPP  (815) adult male 01day  (1056) adult male 05day  (1243) adult male 30day  (1058) adult female 01day  (1114) adult female 05day  (1681) adult female 30day  (1700) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4360) embryo 02-04hr  (5966) embryo 04-06hr  (4117) embryo 06-08hr  (4122) embryo 08-10hr  (3935) embryo 10-12hr  (3025) embryo 12-14hr  (2124) embryo 14-16hr  (1887) embryo 16-18hr  (1852) embryo 18-20hr    1313 embryo 20-22hr  (2571) embryo 22-24hr  (2212) larva L1    1011 larva L2    721 larva L3 12hr old    626 larva L3 puffstage 1-2    942 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9  1508 white prepupae new  1507 white prepupae 12hr  (1997) white prepupae 24hr  (2008) pupae 2d postWPP    1386 pupae 3d postWPP    820 pupae 4d postWPP    815 adult male 01day    1056 adult male 05day    1243 adult male 30day    1058 adult female 01day    1114 adult female 05day  (1681) adult female 30day  (1700) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4360 embryo 02-04hr    5966 embryo 04-06hr    4117 embryo 06-08hr    4122 embryo 08-10hr    3935 embryo 10-12hr    3025 embryo 12-14hr    2124 embryo 14-16hr    1887 embryo 16-18hr    1852 embryo 18-20hr    1313 embryo 20-22hr    2571 embryo 22-24hr    2212 larva L1    1011 larva L2    721 larva L3 12hr old    626 larva L3 puffstage 1-2    942 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1508 white prepupae new    1507 white prepupae 12hr    1997 white prepupae 24hr    2008 pupae 2d postWPP    1386 pupae 3d postWPP    820 pupae 4d postWPP    815 adult male 01day    1056 adult male 05day    1243 adult male 30day    1058 adult female 01day    1114 adult female 05day    1681 adult female 30day    1700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4360 embryo 02-04hr    5966 embryo 04-06hr    4117 embryo 06-08hr    4122 embryo 08-10hr    3935 embryo 10-12hr    3025 embryo 12-14hr    2124 embryo 14-16hr    1887 embryo 16-18hr    1852 embryo 18-20hr    1313 embryo 20-22hr    2571 embryo 22-24hr    2212 larva L1    1011 larva L2    721 larva L3 12hr old    626 larva L3 puffstage 1-2    942 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1508 white prepupae new    1507 white prepupae 12hr    1997 white prepupae 24hr    2008 pupae 2d postWPP    1386 pupae 3d postWPP    820 pupae 4d postWPP    815 adult male 01day    1056 adult male 05day    1243 adult male 30day    1058 adult female 01day    1114 adult female 05day    1681 adult female 30day    1700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0033951 expression level Developmental Stage   Expression Level embryo 00-02hr    4360 embryo 02-04hr    5966 embryo 04-06hr    4117 embryo 06-08hr    4122 embryo 08-10hr    3935 embryo 10-12hr    3025 embryo 12-14hr    2124 embryo 14-16hr    1887 embryo 16-18hr    1852 embryo 18-20hr    1313 embryo 20-22hr    2571 embryo 22-24hr    2212 larva L1    1011 larva L2    721 larva L3 12hr old    626 larva L3 puffstage 1-2    942 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1508 white prepupae new    1507 white prepupae 12hr    1997 white prepupae 24hr    2008 pupae 2d postWPP    1386 pupae 3d postWPP    820 pupae 4d postWPP    815 adult male 01day    1056 adult male 05day    1243 adult male 30day    1058 adult female 01day    1114 adult female 05day    1681 adult female 30day    1700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (4360) embryo 02-04hr  (5966) embryo 04-06hr  (4117) embryo 06-08hr  (4122) embryo 08-10hr  (3935) embryo 10-12hr  (3025) embryo 12-14hr  (2124) embryo 14-16hr  (1887) embryo 16-18hr  (1852) embryo 18-20hr  (1313) embryo 20-22hr  (2571) embryo 22-24hr  (2212) larva L1  (1011) larva L2  (721) larva L3 12hr old  (626) larva L3 puffstage 1-2  (942) larva L3 puffstage 3-6  (1239) larva L3 puffstage 7-9  (1508) white prepupae new  (1507) white prepupae 12hr  (1997) white prepupae 24hr  (2008) pupae 2d postWPP  (1386) pupae 3d postWPP  (820) pupae 4d postWPP  (815) adult male 01day  (1056) adult male 05day  (1243) adult male 30day  (1058) adult female 01day  (1114) adult female 05day  (1681) adult female 30day  (1700) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (4360) embryo 02-04hr  (5966) embryo 04-06hr  (4117) embryo 06-08hr  (4122) embryo 08-10hr  (3935) embryo 10-12hr  (3025) embryo 12-14hr  2124 embryo 14-16hr  1887 embryo 16-18hr  1852 embryo 18-20hr    1313 embryo 20-22hr  (2571) embryo 22-24hr  2212 larva L1    1011 larva L2    721 larva L3 12hr old    626 larva L3 puffstage 1-2    942 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9  1508 white prepupae new  1507 white prepupae 12hr  1997 white prepupae 24hr  2008 pupae 2d postWPP    1386 pupae 3d postWPP    820 pupae 4d postWPP    815 adult male 01day    1056 adult male 05day    1243 adult male 30day    1058 adult female 01day    1114 adult female 05day  1681 adult female 30day  1700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    4360 embryo 02-04hr    5966 embryo 04-06hr    4117 embryo 06-08hr    4122 embryo 08-10hr    3935 embryo 10-12hr    3025 embryo 12-14hr    2124 embryo 14-16hr    1887 embryo 16-18hr    1852 embryo 18-20hr    1313 embryo 20-22hr    2571 embryo 22-24hr    2212 larva L1    1011 larva L2    721 larva L3 12hr old    626 larva L3 puffstage 1-2    942 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1508 white prepupae new    1507 white prepupae 12hr    1997 white prepupae 24hr    2008 pupae 2d postWPP    1386 pupae 3d postWPP    820 pupae 4d postWPP    815 adult male 01day    1056 adult male 05day    1243 adult male 30day    1058 adult female 01day    1114 adult female 05day    1681 adult female 30day    1700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    4360 embryo 02-04hr    5966 embryo 04-06hr    4117 embryo 06-08hr    4122 embryo 08-10hr    3935 embryo 10-12hr    3025 embryo 12-14hr    2124 embryo 14-16hr    1887 embryo 16-18hr    1852 embryo 18-20hr    1313 embryo 20-22hr    2571 embryo 22-24hr    2212 larva L1    1011 larva L2    721 larva L3 12hr old    626 larva L3 puffstage 1-2    942 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1508 white prepupae new    1507 white prepupae 12hr    1997 white prepupae 24hr    2008 pupae 2d postWPP    1386 pupae 3d postWPP    820 pupae 4d postWPP    815 adult male 01day    1056 adult male 05day    1243 adult male 30day    1058 adult female 01day    1114 adult female 05day    1681 adult female 30day    1700 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0033951    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0033951 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, larval/adult salivary gland, larval trachea, adult ovary, adult male reproductive system. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0033951 expression level Tissue   Expression Level Larval Central Nervous System    320.15 Larval Midgut    48.4 Larval Hindgut    61.6 Larval Malpighian Tubules    69.7 Larval Fat Body    82.3 Larval Salivary Gland    103.6 Larval Trachea    166.125 Larval Carcass    70 Adult Head    108.5 Adult Eye    155.75 Adult Brain    240.9 Adult Thoracic-Abdominal Ganglion    164.7 Adult Crop    89.6 Adult Midgut    93.3 Adult Hindgut    94.1 Adult Malpighian Tubules    45.1 Adult Fat Body    48.3 Adult Salivary Gland    133 Adult Heart    74.475 Adult VirginFemale Spermatheca    35.6 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    237.5 Adult Testis    127.4 Adult Male Accessory Gland    158.1 Adult Carcass    59.8 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    320.15 Larval Midgut    48.4 Larval Hindgut    61.6 Larval Malpighian Tubules    69.7 Larval Fat Body    82.3 Larval Salivary Gland    103.6 Larval Trachea    166.125 Larval Carcass    70 Adult Head    108.5 Adult Eye    155.75 Adult Brain    240.9 Adult Thoracic-Abdominal Ganglion    164.7 Adult Crop    89.6 Adult Midgut    93.3 Adult Hindgut    94.1 Adult Malpighian Tubules    45.1 Adult Fat Body    48.3 Adult Salivary Gland    133 Adult Heart    74.475 Adult VirginFemale Spermatheca    35.6 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    237.5 Adult Testis    127.4 Adult Male Accessory Gland    158.1 Adult Carcass    59.8 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    320.15 Larval Midgut    48.4 Larval Hindgut    61.6 Larval Malpighian Tubules    69.7 Larval Fat Body    82.3 Larval Salivary Gland    103.6 Larval Trachea    166.125 Larval Carcass    70 Adult Head    108.5 Adult Eye    155.75 Adult Brain    240.9 Adult Thoracic-Abdominal Ganglion    164.7 Adult Crop    89.6 Adult Midgut    93.3 Adult Hindgut    94.1 Adult Malpighian Tubules    45.1 Adult Fat Body    48.3 Adult Salivary Gland    133 Adult Heart    74.475 Adult VirginFemale Spermatheca    35.6 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    237.5 Adult Testis    127.4 Adult Male Accessory Gland    158.1 Adult Carcass    59.8 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    320.15 Larval Midgut    48.4 Larval Hindgut    61.6 Larval Malpighian Tubules    69.7 Larval Fat Body    82.3 Larval Salivary Gland    103.6 Larval Trachea    166.125 Larval Carcass    70 Adult Head    108.5 Adult Eye    155.75 Adult Brain    240.9 Adult Thoracic-Abdominal Ganglion    164.7 Adult Crop    89.6 Adult Midgut    93.3 Adult Hindgut    94.1 Adult Malpighian Tubules    45.1 Adult Fat Body    48.3 Adult Salivary Gland    133 Adult Heart    74.475 Adult VirginFemale Spermatheca    35.6 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    237.5 Adult Testis    127.4 Adult Male Accessory Gland    158.1 Adult Carcass    59.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0033951 expression level Tissue   Expression Level Larval Central Nervous System    320.15 Larval Midgut    48.4 Larval Hindgut    61.6 Larval Malpighian Tubules    69.7 Larval Fat Body    82.3 Larval Salivary Gland    103.6 Larval Trachea    166.125 Larval Carcass    70 Adult Head    108.5 Adult Eye    155.75 Adult Brain    240.9 Adult Thoracic-Abdominal Ganglion    164.7 Adult Crop    89.6 Adult Midgut    93.3 Adult Hindgut    94.1 Adult Malpighian Tubules    45.1 Adult Fat Body    48.3 Adult Salivary Gland    133 Adult Heart    74.475 Adult VirginFemale Spermatheca    35.6 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    237.5 Adult Testis    127.4 Adult Male Accessory Gland    158.1 Adult Carcass    59.8 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    320.15 Larval Midgut    48.4 Larval Hindgut    61.6 Larval Malpighian Tubules    69.7 Larval Fat Body    82.3 Larval Salivary Gland    103.6 Larval Trachea    166.125 Larval Carcass    70 Adult Head    108.5 Adult Eye    155.75 Adult Brain    240.9 Adult Thoracic-Abdominal Ganglion    164.7 Adult Crop    89.6 Adult Midgut    93.3 Adult Hindgut    94.1 Adult Malpighian Tubules    45.1 Adult Fat Body    48.3 Adult Salivary Gland    133 Adult Heart    74.475 Adult VirginFemale Spermatheca    35.6 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    237.5 Adult Testis    127.4 Adult Male Accessory Gland    158.1 Adult Carcass    59.8 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    320.15 Larval Midgut    48.4 Larval Hindgut    61.6 Larval Malpighian Tubules    69.7 Larval Fat Body    82.3 Larval Salivary Gland    103.6 Larval Trachea    166.125 Larval Carcass    70 Adult Head    108.5 Adult Eye    155.75 Adult Brain    240.9 Adult Thoracic-Abdominal Ganglion    164.7 Adult Crop    89.6 Adult Midgut    93.3 Adult Hindgut    94.1 Adult Malpighian Tubules    45.1 Adult Fat Body    48.3 Adult Salivary Gland    133 Adult Heart    74.475 Adult VirginFemale Spermatheca    35.6 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    237.5 Adult Testis    127.4 Adult Male Accessory Gland    158.1 Adult Carcass    59.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    320.15 Larval Midgut    48.4 Larval Hindgut    61.6 Larval Malpighian Tubules    69.7 Larval Fat Body    82.3 Larval Salivary Gland    103.6 Larval Trachea    166.125 Larval Carcass    70 Adult Head    108.5 Adult Eye    155.75 Adult Brain    240.9 Adult Thoracic-Abdominal Ganglion    164.7 Adult Crop    89.6 Adult Midgut    93.3 Adult Hindgut    94.1 Adult Malpighian Tubules    45.1 Adult Fat Body    48.3 Adult Salivary Gland    133 Adult Heart    74.475 Adult VirginFemale Spermatheca    35.6 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    237.5 Adult Testis    127.4 Adult Male Accessory Gland    158.1 Adult Carcass    59.8 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca no informative data Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    108.5   NA  Eye    155.75   NA  Brain    240.9   320.15  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    164.7   NA  Crop    89.6   48.4  Midgut    93.3   61.6  Hindgut    94.1   69.7  Malpighian Tubules    45.1   82.3  Fat Body    48.3   103.6  Salivary Gland    133   NA  Heart    74.475   166.125  Trachea    NA   NA  VirginFemale Spermatheca    35.6   NA  InseminatedFemale Spermatheca    no informative data   NA  Ovary    237.5   NA  Testis    127.4   NA  Male Accessory Gland    158.1   70  Carcass    59.8 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_17
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0033951 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10139-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG10139GD6878 Other Phenotypes Allele body color defective, with Scer\GAL4pnr-MD237 CG10139GD6878 visible, with Scer\GAL4pnr-MD237 CG10139GD6878 Phenotype manifest in Allele mesothoracic tergum, with Scer\GAL4pnr-MD237 CG10139GD6878 trichogen cell, with Scer\GAL4pnr-MD237 CG10139GD6878
Classical Alleles ( 3 )
For All Classical Alleles Show
Allele of CG10139 Class Mutagen Stocks Known lesion CG10139c01615 piggyBac transposase 2 -- CG10139c01709 piggyBac transposase 1 -- CG10139c05462 piggyBac transposase 1 --
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG10139 Class Mutagen Stocks Known lesion CG10139GD6878 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Disrupted in	Df(2R)Exel6284 (Ryder, 2004.4.26) Df(2R)Exel7133 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD6878} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions PBac{PB}CG10139c01615 NA PBac{PB}CG10139c01709 NA PBac{PB}CG10139c05462 NA
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
	There is no information supporting a biological process, cellular component or molecular function term for this gene. (Based on a review of available data on: 2010-10-21)
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG10139 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 62372 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0033951 DroID - A comprehensive database of gene and protein interactions. • FBgn0033951 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 36626
Orthologs
Genome-wide drosophilid orthologs	Dana\GF17496 Dere\GG20471 Dgri\GH19472 Dmoj\GI22253 Dper\GL24003 Dpse\GA26474 Dsec\GM21563 Dsim\GD11068 Dvir\GJ24044 Dwil\GK14367 Dyak\GE13602
Curated drosophilid orthologs
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • PHUM006511-PA Pediculus humanus (human body louse) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV50913 FBgn0231263 FBgn0216373 FBgn0211131 FBgn0182828 FBgn0176443 FBgn0247848 FBgn0161593 FBgn0144981 FBgn0126937 FBgn0112661 FBgn0094514 ACYPI23849
Stocks & Reagents
Stocks Listed in FlyBase ( 5 )
Bloomington	10655 w1118; PBac{PB}CG10139c01615/CyO
Harvard	- PBac{PB}CG10139c01615 - PBac{PB}CG10139c01709 - PBac{PB}CG10139c05462
VDRC	v44810 w1118; P{GD6878}v44810/TM3
Genomic Clones ( 2 )
	BACR07P02 BACR27M04 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 47 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH05836
Other clones	DPiM_GH05836
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH06639 GH17540 RE23590 RE53546 RE58824 RE59718 RE59918 RE73231 RH06837 RH47870 RH53063
Other clones	7832 12661 191396 214217.71 CK01.53C.B6 CK01.142D.E12 EC13575 EK105741 EK113716 EK115952 EK293859 EP19441 FGH110H12 FGH111C07 FGM318A12 RM06249 RM06349 RM06449 RP001007412 RP001008168 RP001010744 RP001013212 RP001018023 RP001020478 RP001020636 RP001021874 RP001022710 RP001023824 RP001030629 RP001041681 RP001044903 RP001047961 RP001051043 RP001052013
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0033951 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 36626
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_137132 RefSeq (Proteins) • NP_610976 DDBJ / EMBL / GenBank • AAF58225 AAK77277 AI107937 AI513215 AY047545 CZ467305 CZ467383 CZ467384 CZ470003 Entrez Gene - A searchable database of RefSeq genes. • 36626 UniProtKB/TrEMBL • Q7K5M2
Other Crossreferences
Linkouts
	BioGRID - A database of protein and genetic interactions • 62372 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0033951 DroID - A comprehensive database of gene and protein interactions. • FBgn0033951 DRSC - Results from RNAi screens. • FBgn0033951 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0033951 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG10139-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0033951 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 36626 InParanoid A subset of ortholog calls from InParanoid. • PHUM006511-PA Pediculus humanus (human body louse) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 36626 modMine - Data generated by the modENCODE project. • FBgn0033951 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV50913 FBgn0231263 FBgn0216373 FBgn0211131 FBgn0182828 FBgn0176443 FBgn0247848 FBgn0161593 FBgn0144981 FBgn0126937 FBgn0112661 FBgn0094514 ACYPI23849
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG10139
Name Synonym
Secondary FlyBase IDs
References ( 12 )
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] Bloomington Drosophila Stock Center, 2004.11.6, Exelixis insertion alleles that are not in FlyBase. Exelixis insertion alleles that are not in FlyBase. [FBrf0179797] Ryder, 2004.4.26, Exelixis CG deletion data. Exelixis CG deletion data. [FBrf0184335]
FlyBase analysis	FlyBase Curators, 2010-, Gene Ontology (GO) annotation review. Gene Ontology (GO) annotation review. [FBrf0216433] FlyBase Curators, 2002-, Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. Use of the ND evidence code for Gene Ontology (GO) terms in FlyBase. [FBrf0159398]
Computer file	Gene Disruption Project members and Exelixis, 2005, Genomic mapping of Exelixis insertion collection. Genomic mapping of Exelixis insertion collection. [FBrf0184340] Gene Disruption Project members, 2001-, [title not yet available] [title not yet available] [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]