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FB2021_04, released August 17, 2021

Gene: Dmel\Nup62

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General Information
Symbol
Dmel\Nup62
Species
D. melanogaster
Name
Nucleoporin 62kD
Annotation Symbol
CG6251
Feature Type
protein_coding_gene
FlyBase ID
FBgn0034118
Gene Model Status
Current
Stock Availability
6 publicly available
Gene Summary
Essential component of the nuclear pore complex (By similarity). The N-terminal is probably involved in nucleocytoplasmic transport (By similarity). The C-terminal is involved in protein-protein interaction probably via coiled-coil formation, promotes its association with centrosomes and may function in anchorage of Nup62 to the pore complex (By similarity). Binds to transcriptionally active genes (PubMed:20144760). Negatively regulates chromatin attachment to the nuclear envelope, probably by preventing chromatin tethering by Nup154 (PubMed:26341556). (UniProt, Q7JXF5)
Contribute a Gene Snapshot for this gene.
All Summaries
Also Known As

p62, Nucleoporin

Key Links
Genomic Location
Cytogenetic map
53C1-53C1
Sequence location
2R:16,344,377..16,345,828 [+]
Recombination map
2-80
RefSeq locus
NT_033778 REGION:16344377..16345828
Sequence
Get Decorated FASTA
Genomic Maps
Other Genome Views
The following external sites may use different assemblies or annotations than FlyBase.
NCBI
UCSC
Ensembl
PopFly
Function
GO Summary Ribbons
Gene Ontology (GO) Annotations (11 terms)
Molecular Function (3 terms)
Terms Based on Experimental Evidence (1 term)
CV Term
Evidence
References
enables chromatin DNA binding
inferred from mutant phenotype
(assigned by UniProt )
(Kalverda et al., 2010)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
enables phospholipid binding
inferred from biological aspect of ancestor with PANTHER:PTN000249931
(assigned by GO_Central )
(Gaudet et al., 2011)
enables structural constituent of nuclear pore
inferred from biological aspect of ancestor with PANTHER:PTN000249931
(assigned by GO_Central )
(Gaudet et al., 2011)
inferred from sequence or structural similarity with SGD:S000003577
(FlyBase Curators, 2008--)
Biological Process (5 terms)
Terms Based on Experimental Evidence (3 terms)
CV Term
Evidence
References
involved_in chromosome attachment to the nuclear envelope
inferred from mutant phenotype
(assigned by UniProt )
(Breuer and Ohkura, 2015)
inferred from genetic interaction with UniProtKB:Q9V463
(assigned by UniProt )
(Breuer and Ohkura, 2015)
involved_in oocyte karyosome formation
inferred from mutant phenotype
(assigned by UniProt )
(Breuer and Ohkura, 2015)
inferred from genetic interaction with UniProtKB:Q7K0D8
(assigned by UniProt )
(Breuer and Ohkura, 2015)
inferred from genetic interaction with UniProtKB:Q9V463
(assigned by UniProt )
(Breuer and Ohkura, 2015)
inferred from genetic interaction with UniProtKB:Q9VKJ3
(assigned by UniProt )
(Breuer and Ohkura, 2015)
inferred from genetic interaction with UniProtKB:Q9VWE6
(assigned by UniProt )
(Breuer and Ohkura, 2015)
involved_in regulation of nucleus size
inferred from mutant phenotype
(assigned by UniProt )
(Breuer and Ohkura, 2015)
Terms Based on Predictions or Assertions (2 terms)
CV Term
Evidence
References
involved_in protein import into nucleus
inferred from biological aspect of ancestor with PANTHER:PTN000249931
(assigned by GO_Central )
(Gaudet et al., 2011)
involved_in RNA export from nucleus
inferred from biological aspect of ancestor with PANTHER:PTN000249931
(assigned by GO_Central )
(Gaudet et al., 2011)
Cellular Component (3 terms)
Terms Based on Experimental Evidence (2 terms)
CV Term
Evidence
References
located_in chromatin
inferred from mutant phenotype
(assigned by UniProt )
(Kalverda et al., 2010)
located_in nuclear envelope
inferred from direct assay
(assigned by UniProt )
(Breuer and Ohkura, 2015)
Terms Based on Predictions or Assertions (1 term)
CV Term
Evidence
References
part_of nuclear pore central transport channel
inferred from biological aspect of ancestor with PANTHER:PTN000249931
(assigned by GO_Central )
(Gaudet et al., 2011)
inferred from sequence or structural similarity with SGD:S000003577
(FlyBase Curators, 2008--)
Gene Group (FlyBase)
Protein Family (UniProt)
Belongs to the nucleoporin NSP1/NUP62 family. (Q7JXF5)
Protein Signatures (InterPro)
Summaries
Gene Group (FlyBase)
NUCLEAR PORE COMPLEX -
The Nuclear Pore Complex (NPC) is a large protein complex embedded in the nuclear membrane that facilitates nucleocytoplasmic traffic. The NPC is composed of approximately 30 different proteins: the nucleoporins. The NPC displays 8-fold symmetry and each nucleoporin is present in multiple copies. From the central ring that forms the pore, filaments protrude into the cytoplasm (cytoplasmic filaments) and the nucleoplasm (nuclear basket). Many nucleoporins contain FG repeats which are thought to act as a diffusion barrier and docking sight for transport receptors (karyopherins). Export and import is controlled by the interaction of the karyopherins with localization and export sequences. (Adapted from FBrf0220062 and PMID:21495847).
Protein Function (UniProtKB)
Essential component of the nuclear pore complex (By similarity). The N-terminal is probably involved in nucleocytoplasmic transport (By similarity). The C-terminal is involved in protein-protein interaction probably via coiled-coil formation, promotes its association with centrosomes and may function in anchorage of Nup62 to the pore complex (By similarity). Binds to transcriptionally active genes (PubMed:20144760). Negatively regulates chromatin attachment to the nuclear envelope, probably by preventing chromatin tethering by Nup154 (PubMed:26341556).
(UniProt, Q7JXF5)
Gene Model and Products
Number of Transcripts
2
Number of Unique Polypeptides
1

Please see the JBrowse view of Dmel\Nup62 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Protein Domains (via Pfam)
Isoform displayed:
Pfam protein domains
InterPro name
classification
start
end
Protein Domains (via SMART)
Isoform displayed:
SMART protein domains
InterPro name
classification
start
end
Comments on Gene Model

Gene model reviewed during 5.50

Sequence Ontology: Class of Gene
nuclear_gene
protein_coding_gene
Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Assoc. CDS (aa)
Nup62-RA
FBtr0087150
NM_137276
1452
394
Nup62-RB
FBtr0340060
NM_001299560
1345
394
Additional Transcript Data and Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank
Nup62-PA
FBpp0086294
40.7
394
4.43
NP_611120
AAF58007
Nup62-PB
FBpp0309066
40.7
394
4.43
NP_001286489
AHN56285
Polypeptides with Identical Sequences

The group(s) of polypeptides indicated below share identical sequence to each other.

394 aa isoforms: Nup62-PA, Nup62-PB
Additional Polypeptide Data and Comments
Reported size (kDa)
Comments
External Data
Domain

Contains FG repeats. FG repeats are interaction sites for karyopherins (importins, exportins) and form probably an affinity gradient, guiding the transport proteins unidirectionally with their cargo through the NPC. FG repeat regions are highly flexible and lack ordered secondary structure. The overall conservation of FG repeats regarding exact sequence, spacing, and repeat unit length is limited.

(UniProt, Q7JXF5)
Crossreferences
InterPro - A database of protein families, domains and functional sites
Linkouts
Sequences Consistent with the Gene Model
Mapped Features

Click to get a list of regulatory features (enhancers, TFBS, etc.) and gene disruptions (point mutations, indels, etc.) within or overlapping Dmel\Nup62 using the Feature Mapper tool.

External Data
Crossreferences
Linkouts
Expression Data
Expression Summary Ribbons
Colored tiles in ribbon indicate that expression data has been curated by FlyBase for that anatomical location. Colorless tiles indicate that there is no curated data for that location.
For complete stage-specific expression data, view the modENCODE Development RNA-Seq section under High-Throughput Expression below.
Transcript Expression
Polypeptide Expression
mass spectroscopy
Stage
Tissue/Position (including subcellular localization)
Reference
adult stage
adult head
(Aradska et al., 2015)
day 7 of adulthood -- day 49 of adulthood
adult heart
(Cammarato et al., 2011)
Additional Descriptive Data
Marker for
 
Subcellular Localization
CV Term
Evidence
References
located_in chromatin
inferred from mutant phenotype
(assigned by UniProt )
(Kalverda et al., 2010)
located_in nuclear envelope
inferred from direct assay
(assigned by UniProt )
(Breuer and Ohkura, 2015)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools

GBrowse - Visual display of RNA-Seq signals

View Dmel\Nup62 in GBrowse 2
RNA-Seq by Region - Search RNA-Seq expression levels by exon or genomic region
Bulk Downloads
RNA-Seq RPKM values for all genes
Reference
See Gelbart and Emmert, 2013 for analysis details and data files for all genes.
Developmental Proteome: Life Cycle
Developmental Proteome: Embryogenesis
External Data and Images
Linkouts
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
DRscDB
EMBL-EBI Single Cell Expression Atlas
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
Flygut - An atlas of the Drosophila adult midgut
Images
FlyExpress - Embryonic expression images (BDGP data)
  • Stages(s) 1-3
  • Stages(s) 4-6
  • Stages(s) 7-8
  • Stages(s) 9-10
  • Stages(s) 11-12
  • Stages(s) 13-16
FlyBase Wiki
Image Based Resources
Alleles, Insertions, Transgenic Constructs, and Aberrations
Classical and Insertion Alleles ( 6 )
For All Classical and Insertion Alleles Show
 
Other relevant insertions
Transgenic Constructs ( 12 )
For All Alleles Carried on Transgenic Constructs Show
Transgenic constructs containing/affecting coding region of Nup62
Transgenic constructs containing regulatory region of Nup62
Aberrations (Deficiencies and Duplications) ( 2 )
Inferred from experimentation ( 2 )
Gene disrupted in
Df(2R)Exel6063
(Ryder, 2004.4.26)
Df(2R)Exel7142
(Ryder, 2004.4.26)
Inferred from location ( 0 )
Alleles Representing Disease-Implicated Variants
Phenotypes
Orthologs
Downloads
Download All DIOPT Orthologs
Download All OrthoDB Orthologs
Human Orthologs (via DIOPT v8.0)
Homo sapiens (Human) (5)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Hsap\NUP62
10 of 15
Yes
Yes
1  
Hsap\NUP62CL
4 of 15
No
Yes
1  
Hsap\JAKMIP3
1 of 15
No
No
Hsap\NUP58
1 of 15
No
No
1  
Hsap\NUP98
1 of 15
No
No
0  
Model Organism Orthologs (via DIOPT v8.0)
Mus musculus (laboratory mouse) (4)
Species\Gene Symbol
Score
Best Score
Best Reverse Score
Source
Compara
eggNOG
Hieranoid
Homologene
Inparanoid
Isobase
OMA
OrthoDB
OrthoFinder
OrthoInspector
orthoMCL
Panther
Phylome
RoundUp
TreeFam
ZFIN
Alignment
Complementation?
Transgene?
Mmus\Nup62
11 of 15
Yes
Yes
Mmus\Nup62cl
7 of 15
No
Yes
Mmus\Nup98
1 of 15
No
No
Mmus\Nupl1
1 of 15
No
No
Rattus norvegicus (Norway rat) (2)
Rnor\Nup62
8 of 13
Yes
Yes
Rnor\Nup62cl
4 of 13
No
Yes
Xenopus tropicalis (Western clawed frog) (1)
Xtro\nup62
6 of 12
Yes
Yes
Danio rerio (Zebrafish) (3)
Drer\nup62l
10 of 15
Yes
Yes
Drer\nup58
1 of 15
No
No
Drer\nup98
1 of 15
No
No
Caenorhabditis elegans (Nematode, roundworm) (4)
Cele\npp-11
6 of 15
Yes
Yes
Cele\npp-4
1 of 15
No
No
Cele\npp-10
1 of 15
No
No
Cele\unc-14
1 of 15
No
Yes
Arabidopsis thaliana (thale-cress) (1)
Atha\EMB2766
5 of 9
Yes
Yes
Saccharomyces cerevisiae (Brewer's yeast) (5)
Scer\NSP1
8 of 15
Yes
Yes
Scer\NUP49
1 of 15
No
No
Scer\NUP100
1 of 15
No
No
Scer\NUP116
1 of 15
No
No
Scer\NUP145
1 of 15
No
No
Schizosaccharomyces pombe (Fission yeast) (3)
Spom\nsp1
10 of 12
Yes
Yes
Spom\nup45
1 of 12
No
No
Spom\nup189
1 of 12
No
No
Ortholog(s) in Drosophila Species (via OrthoDB v9.1) ( EOG09190E9F )
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila suzukii
Spotted wing Drosophila
Dsuz\DS10_00003197
Drosophila simulans
Dsim\GD11188
Drosophila sechellia
Dsec\GM21692
Drosophila erecta
Dere\GG20600
Drosophila yakuba
Dyak\GE11786
Drosophila ananassae
Dana\GF13594
Drosophila pseudoobscura pseudoobscura
Dpse\GA19470
Drosophila persimilis
Dper\GL10733
Drosophila willistoni
Dwil\GK21694
Drosophila virilis
Dvir\GJ15090
Drosophila mojavensis
Dmoj\GI19922
Drosophila grimshawi
Dgri\GH19964
Orthologs in non-Drosophila Dipterans (via OrthoDB v9.1) ( EOG09150CP4 )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Musca domestica
House fly
Mdoa\17012405
Glossina morsitans
Tsetse fly
Gmor\GMOY010806
Lucilia cuprina
Australian sheep blowfly
Lcup\FF38_13034
Mayetiola destructor
Hessian fly
Mdes\Mdes002614
Aedes aegypti
Yellow fever mosquito
Aaeg\AAEL000782
Anopheles darlingi
American malaria mosquito
Adar\ADAC001078
Anopheles gambiae
Malaria mosquito
Agam\AGAP010978
Culex quinquefasciatus
Southern house mosquito
Cqui\CPIJ004435
Orthologs in non-Dipteran Insects (via OrthoDB v9.1) ( EOG090W0D2Y )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Bombyx mori
Silkmoth
Bmor\BGIBMGA013791
Danaus plexippus
Monarch butterfly
Dple\DPOGS202371-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS202370-PA
Danaus plexippus
Monarch butterfly
Dple\DPOGS211483-PA
Heliconius melpomene
Postman butterfly
Hmel\HMEL017167
Apis florea
Little honeybee
Aflo\2470586164
Apis mellifera
Western honey bee
Amel\GB44789
Bombus impatiens
Common eastern bumble bee
Bimp\BIMP23049
Bombus terrestris
Buff-tailed bumblebee
Bter\15214125
Linepithema humile
Argentine ant
Lhum\LH10449
Linepithema humile
Argentine ant
Lhum\LH13897
Megachile rotundata
Alfalfa leafcutting bee
Mrot\MROTU:00237b
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG009626
Tribolium castaneum
Red flour beetle
Tcas\TC009739
Pediculus humanus
Human body louse
Phum\PHUM387820
Rhodnius prolixus
Kissing bug
Rpro\RPRC001584
Cimex lectularius
Bed bug
Clec\CLEC000685
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI000546
Acyrthosiphon pisum
Pea aphid
Apim\ACYPI004649
Zootermopsis nevadensis
Nevada dampwood termite
Znev\Znev_11707
Orthologs in non-Insect Arthropods (via OrthoDB v9.1) ( EOG090X0EZJ )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strigamia maritima
European centipede
Smar\SMAR014940
Ixodes scapularis
Black-legged tick
Isca\ISCW008163
Stegodyphus mimosarum
African social velvet spider
Smim\KFM76001.1
Tetranychus urticae
Two-spotted spider mite
Turt\tetur37g00790
Daphnia pulex
Water flea
Dpux\DAPPUDRAFT_50835
Orthologs in non-Arthropod Metazoa (via OrthoDB v9.1) ( EOG091G0KV9 )
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Strongylocentrotus purpuratus
Purple sea urchin
Spur\SPU_026142gn
Strongylocentrotus purpuratus
Purple sea urchin
Spur\Sp-Nup62
Ciona intestinalis
Vase tunicate
Cint\ENSCING00000007265
Gallus gallus
Domestic chicken
Ggal\NUP62
Paralogs
Downloads
Download All DIOPT Paralogs
Paralogs (via DIOPT v8.0)
Drosophila melanogaster (Fruit fly) (3)
Gene Symbol
Score
Source
Compara
eggNOG
Homologene
Inparanoid
Isobase
OrthoDB
OrthoFinder
orthoMCL
Panther
RoundUp
Alignment
CG8086
1 of 10
Nup58
1 of 10
Nup98-96
1 of 10
Human Disease Associations
FlyBase Human Disease Model Reports
    Disease Model Summary Ribbon
    Disease Ontology (DO) Annotations
    Models Based on Experimental Evidence ( 0 )
    Allele
    Disease
    Evidence
    References
    Potential Models Based on Orthology ( 1 )
    Human Ortholog
    Disease
    Evidence
    References
    NUP62; nucleoporin 62
    model of  striatonigral degeneration
    IEA
    (FlyBase, 2019-)
    Modifiers Based on Experimental Evidence ( 1 )
    Disease Associations of Human Orthologs (via DIOPT v8.0 and OMIM)
    Note that ortholog calls supported by only 1 or 2 algorithms (DIOPT score < 3) are not shown.
    Homo sapiens (Human)
    Gene name
    Score
    OMIM
    OMIM Phenotype
    DO term
    Complementation?
    Transgene?
    NUP62; nucleoporin 62
    10 of 15
    605815
     
    NUP62CL; nucleoporin 62 C-terminal like
    4 of 15
         
        Functional Complementation Data
        Functional complementation data is computed by FlyBase using a combination of the orthology data obtained from DIOPT and OrthoDB and the allele-level genetic interaction data curated from the literature.
        Interactions
        Summary of Physical Interactions
        esyN Network Diagram
        Show neighbor-neighbor interactions:
        Select Layout:
        Legend:
        Protein
        RNA
        Selected Interactor(s)
        Interactions Browser
        View in Interactions Browser
        Please see the Physical Interaction reports below for full details
        protein-protein
        Physical Interaction
        Assay
        References
        Nup62 - CG5955
        experimental knowledge based
        (Guruharsha et al., 2011)
        Nup62 - Nup214
        experimental knowledge based
        (Guruharsha et al., 2011)
        Nup62 - mbo
        experimental knowledge based
        (Guruharsha et al., 2011)
        Nup62 - sbr
        anti tag coimmunoprecipitation, western blot
        (Kozlova et al., 2006)
        Summary of Genetic Interactions
        esyN Network Diagram
        esyN Network Key:
        Suppression
        Enhancement
        View in Interactions Browser
        Please look at the allele data for full details of the genetic interactions
        Starting gene(s)
        Interaction type
        Interacting gene(s)
        Reference
        Nup62
        enhanceable
        Elys
        (Breuer and Ohkura, 2015)
        Nup62
        suppressible
        Nup154
        (Breuer and Ohkura, 2015)
        Starting gene(s)
        Interaction type
        Interacting gene(s)
        Reference
        External Data
        Linkouts
        BioGRID - A database of protein and genetic interactions.
        DroID - A comprehensive database of gene and protein interactions.
        MIST (protein-protein) - An integrated Molecular Interaction Database
        Pathways
        Signaling Pathways (FlyBase)
        Metabolic Pathways
        External Data
        Genomic Location and Detailed Mapping Data
        Chromosome (arm)
        2R
        Recombination map
        2-80
        Cytogenetic map
        53C1-53C1
        Sequence location
        2R:16,344,377..16,345,828 [+]
        FlyBase Computed Cytological Location
        Cytogenetic map
        Evidence for location
        53C1-53C1
        Limits computationally determined from genome sequence between P{lacW}Lis-1k11702&P{EP}CG8443EP969 and P{lacW}l(2)k07824k07824&P{lacW}vegk03402
        Experimentally Determined Cytological Location
        Cytogenetic map
        Notes
        References
        Experimentally Determined Recombination Data
        Location

        2-80

        (FlyBase, 2016)

        2-82.2

        (Comeron et al., 2012)
        Left of (cM)
        Right of (cM)
        Notes
        Stocks and Reagents
        Stocks (6)
        Genomic Clones (17)
         

        Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

        cDNA Clones (101)
         

        Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

        cDNA clones, fully sequenced
        BDGP DGC clones
        Other clones
        Drosophila Genomics Resource Center cDNA clones

        For each fully sequenced cDNA the DGRC maintains various forms of the cDNA (e.g tagged or untagged) in several different host vectors for subsequent cloning and expression in Drosophila and Drosophila cell lines.

        cDNA Clones, End Sequenced (ESTs)
        BDGP DGC clones
        Other clones
        RNAi and Array Information
        Linkouts
        DRSC - Results frm RNAi screens
        GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
        Antibody Information
        Laboratory Generated Antibodies
         

        polyclonal

        (Breuer and Ohkura, 2015)
        Commercially Available Antibodies
         
        Other Information
        Relationship to Other Genes
        Source for database identify of
        Source for database merge of
        Additional comments
        Other Comments

        S2 cells treated with dsRNA generated against this gene show reduced phagocytosis of Candida albicans compared to untreated cells.

        (Stroschein-Stevenson et al., 2006)

        Isolated from a cDNA expression library screened with mAb414 of Davis and Blobel that recognises nucleoporin p62.

        (Pokrywka et al., 1996)
        Origin and Etymology
        Discoverer
        Etymology
        Identification
        External Crossreferences and Linkouts ( 39 )
        Sequence Crossreferences
        NCBI Gene - Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
        GenBank Nucleotide - A collection of sequences from several sources, including GenBank, RefSeq, TPA, and PDB.
        GenBank Protein - A collection of sequences from several sources, including translations from annotated coding regions in GenBank, RefSeq and TPA, as well as records from SwissProt, PIR, PRF, and PDB.
        RefSeq - A comprehensive, integrated, non-redundant, well-annotated set of reference sequences including genomic, transcript, and protein.
        UniProt/Swiss-Prot - Manually annotated and reviewed records of protein sequence and functional information
        Other crossreferences
        BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
        Drosophila Genomics Resource Center - Drosophila Genomics Resource Center (DGRC) cDNA clones
        DRscDB
        EMBL-EBI Single Cell Expression Atlas
        Fly-FISH - A database of Drosophila embryo and larvae mRNA localization patterns
        Flygut - An atlas of the Drosophila adult midgut
        GenomeRNAi - A database for cell-based and in vivo RNAi phenotypes and reagents
        InterPro - A database of protein families, domains and functional sites
        KEGG Genes - Molecular building blocks of life in the genomic space.
        MARRVEL_MODEL
        modMine - A data warehouse for the modENCODE project
        Linkouts
        BioGRID - A database of protein and genetic interactions.
        DroID - A comprehensive database of gene and protein interactions.
        DRSC - Results frm RNAi screens
        FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
        FlyCyc Genes - Genes from a BioCyc PGDB for Dmel
        FlyMine - An integrated database for Drosophila genomics
        KEGG Pathways - Wiring diagrams of molecular interactions, reactions and relations.
        MIST (protein-protein) - An integrated Molecular Interaction Database
        Reactome - An open-source, open access, manually curated and peer-reviewed pathway database.
        Synonyms and Secondary IDs (7)
        Datasets (0)
        Study focus (0)
        Experimental Role
        Project
        Project Type
        Title
        References (51)