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Gene Dmel\CG11208

General Information
Symbol	Dmel\CG11208	Species	D. melanogaster
Name		Annotation symbol	CG11208
Feature type	protein_coding_gene	FlyBase ID	FBgn0034488
Gene Model Status	Current	Stock availability	3 publicly available
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	56F11-56F11	Sequence location	2R:16,130,257..16,132,893 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG11208 (FBgn0034488). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: oxalyl-CoA decarboxylase activity. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. Protein features are: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-06 and 18-24 hour embryonic stages, at stages throughout the larval period, during early pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, larval/adult Malpighian tubules, larval fat body. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult hindgut, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1630892_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG11208. Gene sequence location is 2R:16130256..16132904.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 56F11-56F11   Limits computationally determined from genome sequence between P{lacW}l(2)k08002k08002 and P{lacW}Ate1k10809
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG11208 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.51
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG11208-RA FBtr0086322  NM_137616   1984   568
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG11208-PA   FBpp0085630   62.3   568   7.51     NP_611460   AAF57501
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Thiamine pyrophosphate enzyme, C-terminal TPP-binding (IPR011766) Thiamine pyrophosphate enzyme, central domain (IPR012000) Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (IPR012001)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA392629   AA568008   AA696531   AA735604   AE013599 AAF57501   AI294895   AI294941   AI297079   AI388328   AI404043   AI455585   AI520011   AI520137   AW943498   AX094072   AY058683 AAL13912   BF490562   BF496928   BF497058   BF502304   BG637523   BG637655   BH615125   BI168014   BI168049   BI170841   BI213064   BI214655   BI215053   BI229070   BI233098   BI235974   BI238963   BI243190   BI351954   BI354152   BI355551   BI370954   BI371728   BI373325   BI484394   BI486278   BI563781   BI570392   BI578593   BI579566   BI581233   BI581468   BI582075   BI582208   BI582615   BI587279   BI590075   BI592806   BI605280   BI623165   BI638665   BI640289   BI641035   EC237770   EL882262   ES693561   ES693566   ES693570   ES693596   ES693606   EV586876   GH743952   GH744905   GH745151   GH763500   GH763524   GH764515   GH764791   GH768300   GH770092
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q7K3B7
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   anlage in statu nascendi   (Fisher et al., 2012) anterior endoderm anlage   (Fisher et al., 2012) Comment:anlage in statu nascendi central brain anlage in statu nascendi   (Fisher et al., 2012) visual anlage in statu nascendi   (Fisher et al., 2012) Comment:reported as procephalic ectoderm anlage in statu nascendi antennal anlage in statu nascendi   (Fisher et al., 2012) Comment:reported as procephalic ectoderm anlage in statu nascendi dorsal head epidermis anlage in statu nascendi   (Fisher et al., 2012) Comment:reported as procephalic ectoderm anlage in statu nascendi embryonic stage 7 -- 8   antennal anlage   (Fisher et al., 2012) Comment:reported as procephalic ectoderm anlage central brain anlage   (Fisher et al., 2012) Comment:reported as procephalic ectoderm anlage dorsal head epidermis anlage   (Fisher et al., 2012) Comment:reported as procephalic ectoderm anlage visual anlage   (Fisher et al., 2012) Comment:reported as procephalic ectoderm anlage anterior endoderm anlage   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) embryonic stage 9 -- 10   antennal primordium   (Fisher et al., 2012) Comment:reported as procephalic ectoderm primordium central brain primordium   (Fisher et al., 2012) Comment:reported as procephalic ectoderm primordium visual primordium   (Fisher et al., 2012) Comment:reported as procephalic ectoderm primordium dorsal head epidermis primordium   (Fisher et al., 2012) Comment:reported as procephalic ectoderm primordium lateral head epidermis primordium   (Fisher et al., 2012) Comment:reported as procephalic ectoderm primordium ventral head epidermis primordium   (Fisher et al., 2012) Comment:reported as procephalic ectoderm primordium anterior endoderm   (Fisher et al., 2012) head mesoderm   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) trunk mesoderm   (Fisher et al., 2012) embryonic stage 11 -- 12   anterior midgut primordium   (Fisher et al., 2012) organism | ubiquitous   (Fisher et al., 2012) posterior midgut primordium   (Fisher et al., 2012) trunk mesoderm   (Fisher et al., 2012) embryonic stage 13 -- 16   embryonic midgut chamber   (Fisher et al., 2012) embryonic/larval midgut   (Fisher et al., 2012)
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Many larval and adult organs/tissues expressed at moderate levels. Expression at high levels in the following post-embryonic organs or tissues: larval/adult midgut, larval/adult Malpighian tubules, larval fat body. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval/adult central nervous system, adult crop, larval/adult hindgut, adult heart, adult fat body, larval/adult salivary gland, larval trachea, adult female reproductive system, adult male accessory gland, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    239.2 Larval Midgut    923.4 Larval Hindgut    192.3 Larval Malpighian Tubules    1621.5 Larval Fat Body    752.8 Larval Salivary Gland    336 Larval Trachea    318.5 Larval Carcass    136.075 Adult Head    118.9 Adult Eye    116.35 Adult Brain    113.8 Adult Thoracic-Abdominal Ganglion    125.2 Adult Crop    219 Adult Midgut    935.8 Adult Hindgut    138.5 Adult Malpighian Tubules    756.9 Adult Fat Body    206.6 Adult Salivary Gland    191.9 Adult Heart    171.375 Adult VirginFemale Spermatheca    191.9 Adult InseminatedFemale Spermatheca    195.9 Adult Ovary    441.3 Adult Testis    47.1 Adult Male Accessory Gland    230.3 Adult Carcass    147.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    239.2 Larval Midgut  (923.4) Larval Hindgut    192.3 Larval Malpighian Tubules  (1621.5) Larval Fat Body  (752.8) Larval Salivary Gland    336 Larval Trachea    318.5 Larval Carcass    136.075 Adult Head    118.9 Adult Eye    116.35 Adult Brain    113.8 Adult Thoracic-Abdominal Ganglion    125.2 Adult Crop    219 Adult Midgut  (935.8) Adult Hindgut    138.5 Adult Malpighian Tubules  (756.9) Adult Fat Body    206.6 Adult Salivary Gland    191.9 Adult Heart    171.375 Adult VirginFemale Spermatheca    191.9 Adult InseminatedFemale Spermatheca    195.9 Adult Ovary    441.3 Adult Testis    47.1 Adult Male Accessory Gland    230.3 Adult Carcass    147.7 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    239.2 Larval Midgut    923.4 Larval Hindgut    192.3 Larval Malpighian Tubules  (1621.5) Larval Fat Body    752.8 Larval Salivary Gland    336 Larval Trachea    318.5 Larval Carcass    136.075 Adult Head    118.9 Adult Eye    116.35 Adult Brain    113.8 Adult Thoracic-Abdominal Ganglion    125.2 Adult Crop    219 Adult Midgut    935.8 Adult Hindgut    138.5 Adult Malpighian Tubules    756.9 Adult Fat Body    206.6 Adult Salivary Gland    191.9 Adult Heart    171.375 Adult VirginFemale Spermatheca    191.9 Adult InseminatedFemale Spermatheca    195.9 Adult Ovary    441.3 Adult Testis    47.1 Adult Male Accessory Gland    230.3 Adult Carcass    147.7 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    239.2 Larval Midgut    923.4 Larval Hindgut    192.3 Larval Malpighian Tubules    1621.5 Larval Fat Body    752.8 Larval Salivary Gland    336 Larval Trachea    318.5 Larval Carcass    136.075 Adult Head    118.9 Adult Eye    116.35 Adult Brain    113.8 Adult Thoracic-Abdominal Ganglion    125.2 Adult Crop    219 Adult Midgut    935.8 Adult Hindgut    138.5 Adult Malpighian Tubules    756.9 Adult Fat Body    206.6 Adult Salivary Gland    191.9 Adult Heart    171.375 Adult VirginFemale Spermatheca    191.9 Adult InseminatedFemale Spermatheca    195.9 Adult Ovary    441.3 Adult Testis    47.1 Adult Male Accessory Gland    230.3 Adult Carcass    147.7 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    239.2 Larval Midgut    923.4 Larval Hindgut    192.3 Larval Malpighian Tubules    1621.5 Larval Fat Body    752.8 Larval Salivary Gland    336 Larval Trachea    318.5 Larval Carcass    136.075 Adult Head    118.9 Adult Eye    116.35 Adult Brain    113.8 Adult Thoracic-Abdominal Ganglion    125.2 Adult Crop    219 Adult Midgut    935.8 Adult Hindgut    138.5 Adult Malpighian Tubules    756.9 Adult Fat Body    206.6 Adult Salivary Gland    191.9 Adult Heart    171.375 Adult VirginFemale Spermatheca    191.9 Adult InseminatedFemale Spermatheca    195.9 Adult Ovary    441.3 Adult Testis    47.1 Adult Male Accessory Gland    230.3 Adult Carcass    147.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    239.2 Larval Midgut  (923.4) Larval Hindgut    192.3 Larval Malpighian Tubules  (1621.5) Larval Fat Body  752.8 Larval Salivary Gland    336 Larval Trachea    318.5 Larval Carcass    136.075 Adult Head    118.9 Adult Eye    116.35 Adult Brain    113.8 Adult Thoracic-Abdominal Ganglion    125.2 Adult Crop    219 Adult Midgut  (935.8) Adult Hindgut    138.5 Adult Malpighian Tubules  756.9 Adult Fat Body    206.6 Adult Salivary Gland    191.9 Adult Heart    171.375 Adult VirginFemale Spermatheca    191.9 Adult InseminatedFemale Spermatheca    195.9 Adult Ovary    441.3 Adult Testis    47.1 Adult Male Accessory Gland    230.3 Adult Carcass    147.7 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    239.2 Larval Midgut    923.4 Larval Hindgut    192.3 Larval Malpighian Tubules  1621.5 Larval Fat Body    752.8 Larval Salivary Gland    336 Larval Trachea    318.5 Larval Carcass    136.075 Adult Head    118.9 Adult Eye    116.35 Adult Brain    113.8 Adult Thoracic-Abdominal Ganglion    125.2 Adult Crop    219 Adult Midgut    935.8 Adult Hindgut    138.5 Adult Malpighian Tubules    756.9 Adult Fat Body    206.6 Adult Salivary Gland    191.9 Adult Heart    171.375 Adult VirginFemale Spermatheca    191.9 Adult InseminatedFemale Spermatheca    195.9 Adult Ovary    441.3 Adult Testis    47.1 Adult Male Accessory Gland    230.3 Adult Carcass    147.7 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    239.2 Larval Midgut    923.4 Larval Hindgut    192.3 Larval Malpighian Tubules    1621.5 Larval Fat Body    752.8 Larval Salivary Gland    336 Larval Trachea    318.5 Larval Carcass    136.075 Adult Head    118.9 Adult Eye    116.35 Adult Brain    113.8 Adult Thoracic-Abdominal Ganglion    125.2 Adult Crop    219 Adult Midgut    935.8 Adult Hindgut    138.5 Adult Malpighian Tubules    756.9 Adult Fat Body    206.6 Adult Salivary Gland    191.9 Adult Heart    171.375 Adult VirginFemale Spermatheca    191.9 Adult InseminatedFemale Spermatheca    195.9 Adult Ovary    441.3 Adult Testis    47.1 Adult Male Accessory Gland    230.3 Adult Carcass    147.7 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    118.9   NA  Eye    116.35   NA  Brain    113.8   239.2  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    125.2   NA  Crop    219   923.4  Midgut    935.8   192.3  Hindgut    138.5   1621.5  Malpighian Tubules    756.9   752.8  Fat Body    206.6   336  Salivary Gland    191.9   NA  Heart    171.375   318.5  Trachea    NA   NA  VirginFemale Spermatheca    191.9   NA  InseminatedFemale Spermatheca    195.9   NA  Ovary    441.3   NA  Testis    47.1   NA  Male Accessory Gland    230.3   136.075  Carcass    147.7 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    17 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    7 head, virgin 20-day female    10 head, mated 1-day female    8 head, mated 4-day female    8 head, mated 20-day female    7 head, mated 1-day male    8 head, mated 4-day male    10 head, mated 20-day male    14 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    18 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    55 digestive system, 4-day adult    44 digestive system, 20-day adult    53 fat body, larvae L3 wandering    20 fat body, white prepupae    20 fat body, pupae P8    21 carcass, larvae L3 wandering    17 carcass, 1-day adult    7 carcass, 4-day adult    10 carcass, 20-day adult    9 ovary, virgin 4-day female    54 ovary, mated 4-day female    41 testis, mated 4-day male    11 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (29) central nervous system, larvae L3    17 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    7 head, virgin 20-day female    10 head, mated 1-day female    8 head, mated 4-day female    8 head, mated 20-day female    7 head, mated 1-day male    8 head, mated 4-day male    10 head, mated 20-day male    14 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    18 digestive system, larvae L3 wandering  (56) digestive system, 1-day adult  (55) digestive system, 4-day adult  (44) digestive system, 20-day adult  (53) fat body, larvae L3 wandering    20 fat body, white prepupae    20 fat body, pupae P8    21 carcass, larvae L3 wandering    17 carcass, 1-day adult    7 carcass, 4-day adult    10 carcass, 20-day adult    9 ovary, virgin 4-day female  (54) ovary, mated 4-day female  (41) testis, mated 4-day male    11 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    17 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    7 head, virgin 20-day female    10 head, mated 1-day female    8 head, mated 4-day female    8 head, mated 20-day female    7 head, mated 1-day male    8 head, mated 4-day male    10 head, mated 20-day male    14 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    18 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    55 digestive system, 4-day adult    44 digestive system, 20-day adult    53 fat body, larvae L3 wandering    20 fat body, white prepupae    20 fat body, pupae P8    21 carcass, larvae L3 wandering    17 carcass, 1-day adult    7 carcass, 4-day adult    10 carcass, 20-day adult    9 ovary, virgin 4-day female    54 ovary, mated 4-day female    41 testis, mated 4-day male    11 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    17 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    7 head, virgin 20-day female    10 head, mated 1-day female    8 head, mated 4-day female    8 head, mated 20-day female    7 head, mated 1-day male    8 head, mated 4-day male    10 head, mated 20-day male    14 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    18 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    55 digestive system, 4-day adult    44 digestive system, 20-day adult    53 fat body, larvae L3 wandering    20 fat body, white prepupae    20 fat body, pupae P8    21 carcass, larvae L3 wandering    17 carcass, 1-day adult    7 carcass, 4-day adult    10 carcass, 20-day adult    9 ovary, virgin 4-day female    54 ovary, mated 4-day female    41 testis, mated 4-day male    11 accessory gland, mated 4-day male    7 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    17 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    7 head, virgin 20-day female    10 head, mated 1-day female    8 head, mated 4-day female    8 head, mated 20-day female    7 head, mated 1-day male    8 head, mated 4-day male    10 head, mated 20-day male    14 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    18 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    55 digestive system, 4-day adult    44 digestive system, 20-day adult    53 fat body, larvae L3 wandering    20 fat body, white prepupae    20 fat body, pupae P8    21 carcass, larvae L3 wandering    17 carcass, 1-day adult    7 carcass, 4-day adult    10 carcass, 20-day adult    9 ovary, virgin 4-day female    54 ovary, mated 4-day female    41 testis, mated 4-day male    11 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  29 central nervous system, larvae L3    17 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    7 head, virgin 20-day female    10 head, mated 1-day female    8 head, mated 4-day female    8 head, mated 20-day female    7 head, mated 1-day male    8 head, mated 4-day male    10 head, mated 20-day male    14 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    18 digestive system, larvae L3 wandering  (56) digestive system, 1-day adult  (55) digestive system, 4-day adult  (44) digestive system, 20-day adult  (53) fat body, larvae L3 wandering    20 fat body, white prepupae    20 fat body, pupae P8    21 carcass, larvae L3 wandering    17 carcass, 1-day adult    7 carcass, 4-day adult    10 carcass, 20-day adult    9 ovary, virgin 4-day female  (54) ovary, mated 4-day female  (41) testis, mated 4-day male    11 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    17 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    7 head, virgin 20-day female    10 head, mated 1-day female    8 head, mated 4-day female    8 head, mated 20-day female    7 head, mated 1-day male    8 head, mated 4-day male    10 head, mated 20-day male    14 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    18 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    55 digestive system, 4-day adult    44 digestive system, 20-day adult    53 fat body, larvae L3 wandering    20 fat body, white prepupae    20 fat body, pupae P8    21 carcass, larvae L3 wandering    17 carcass, 1-day adult    7 carcass, 4-day adult    10 carcass, 20-day adult    9 ovary, virgin 4-day female    54 ovary, mated 4-day female    41 testis, mated 4-day male    11 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    17 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    7 head, virgin 20-day female    10 head, mated 1-day female    8 head, mated 4-day female    8 head, mated 20-day female    7 head, mated 1-day male    8 head, mated 4-day male    10 head, mated 20-day male    14 salivary gland, larvae L3 wandering    5 salivary gland, white prepupae    18 digestive system, larvae L3 wandering    56 digestive system, 1-day adult    55 digestive system, 4-day adult    44 digestive system, 20-day adult    53 fat body, larvae L3 wandering    20 fat body, white prepupae    20 fat body, pupae P8    21 carcass, larvae L3 wandering    17 carcass, 1-day adult    7 carcass, 4-day adult    10 carcass, 20-day adult    9 ovary, virgin 4-day female    54 ovary, mated 4-day female    41 testis, mated 4-day male    11 accessory gland, mated 4-day male    7 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderately high expression. Peak expression observed within 00-06 and 18-24 hour embryonic stages, at stages throughout the larval period, during early pupal stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    123 embryo 02-04hr    31 embryo 04-06hr    50 embryo 06-08hr    47 embryo 08-10hr    37 embryo 10-12hr    43 embryo 12-14hr    23 embryo 14-16hr    41 embryo 16-18hr    36 embryo 18-20hr    43 embryo 20-22hr    66 embryo 22-24hr    50 larva L1    131 larva L2    108 larva L3 12hr old    95 larva L3 puffstage 1-2    114 larva L3 puffstage 3-6    85 larva L3 puffstage 7-9    73 white prepupae new    63 white prepupae 12hr    68 white prepupae 24hr    62 pupae 2d postWPP    32 pupae 3d postWPP    22 pupae 4d postWPP    27 adult male 01day    39 adult male 05day    38 adult male 30day    35 adult female 01day    101 adult female 05day    105 adult female 30day    106 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (123) embryo 02-04hr  (31) embryo 04-06hr  (50) embryo 06-08hr  (47) embryo 08-10hr  (37) embryo 10-12hr  (43) embryo 12-14hr    23 embryo 14-16hr  (41) embryo 16-18hr  (36) embryo 18-20hr  (43) embryo 20-22hr  (66) embryo 22-24hr  (50) larva L1  (131) larva L2  (108) larva L3 12hr old  (95) larva L3 puffstage 1-2  (114) larva L3 puffstage 3-6  (85) larva L3 puffstage 7-9  (73) white prepupae new  (63) white prepupae 12hr  (68) white prepupae 24hr  (62) pupae 2d postWPP  (32) pupae 3d postWPP    22 pupae 4d postWPP  (27) adult male 01day  (39) adult male 05day  (38) adult male 30day  (35) adult female 01day  (101) adult female 05day  (105) adult female 30day  (106) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  (123) embryo 02-04hr    31 embryo 04-06hr    50 embryo 06-08hr    47 embryo 08-10hr    37 embryo 10-12hr    43 embryo 12-14hr    23 embryo 14-16hr    41 embryo 16-18hr    36 embryo 18-20hr    43 embryo 20-22hr    66 embryo 22-24hr    50 larva L1  (131) larva L2  (108) larva L3 12hr old    95 larva L3 puffstage 1-2  (114) larva L3 puffstage 3-6    85 larva L3 puffstage 7-9    73 white prepupae new    63 white prepupae 12hr    68 white prepupae 24hr    62 pupae 2d postWPP    32 pupae 3d postWPP    22 pupae 4d postWPP    27 adult male 01day    39 adult male 05day    38 adult male 30day    35 adult female 01day  101 adult female 05day  105 adult female 30day  106 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    123 embryo 02-04hr    31 embryo 04-06hr    50 embryo 06-08hr    47 embryo 08-10hr    37 embryo 10-12hr    43 embryo 12-14hr    23 embryo 14-16hr    41 embryo 16-18hr    36 embryo 18-20hr    43 embryo 20-22hr    66 embryo 22-24hr    50 larva L1    131 larva L2    108 larva L3 12hr old    95 larva L3 puffstage 1-2    114 larva L3 puffstage 3-6    85 larva L3 puffstage 7-9    73 white prepupae new    63 white prepupae 12hr    68 white prepupae 24hr    62 pupae 2d postWPP    32 pupae 3d postWPP    22 pupae 4d postWPP    27 adult male 01day    39 adult male 05day    38 adult male 30day    35 adult female 01day    101 adult female 05day    105 adult female 30day    106 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    123 embryo 02-04hr    31 embryo 04-06hr    50 embryo 06-08hr    47 embryo 08-10hr    37 embryo 10-12hr    43 embryo 12-14hr    23 embryo 14-16hr    41 embryo 16-18hr    36 embryo 18-20hr    43 embryo 20-22hr    66 embryo 22-24hr    50 larva L1    131 larva L2    108 larva L3 12hr old    95 larva L3 puffstage 1-2    114 larva L3 puffstage 3-6    85 larva L3 puffstage 7-9    73 white prepupae new    63 white prepupae 12hr    68 white prepupae 24hr    62 pupae 2d postWPP    32 pupae 3d postWPP    22 pupae 4d postWPP    27 adult male 01day    39 adult male 05day    38 adult male 30day    35 adult female 01day    101 adult female 05day    105 adult female 30day    106 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (123) embryo 02-04hr  31 embryo 04-06hr  (50) embryo 06-08hr  (47) embryo 08-10hr  (37) embryo 10-12hr  (43) embryo 12-14hr    23 embryo 14-16hr  (41) embryo 16-18hr  (36) embryo 18-20hr  (43) embryo 20-22hr  (66) embryo 22-24hr  (50) larva L1  (131) larva L2  (108) larva L3 12hr old  (95) larva L3 puffstage 1-2  (114) larva L3 puffstage 3-6  (85) larva L3 puffstage 7-9  (73) white prepupae new  (63) white prepupae 12hr  (68) white prepupae 24hr  (62) pupae 2d postWPP  32 pupae 3d postWPP    22 pupae 4d postWPP  27 adult male 01day  (39) adult male 05day  (38) adult male 30day  (35) adult female 01day  (101) adult female 05day  (105) adult female 30day  (106) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr  123 embryo 02-04hr    31 embryo 04-06hr    50 embryo 06-08hr    47 embryo 08-10hr    37 embryo 10-12hr    43 embryo 12-14hr    23 embryo 14-16hr    41 embryo 16-18hr    36 embryo 18-20hr    43 embryo 20-22hr    66 embryo 22-24hr    50 larva L1  131 larva L2  108 larva L3 12hr old    95 larva L3 puffstage 1-2  114 larva L3 puffstage 3-6    85 larva L3 puffstage 7-9    73 white prepupae new    63 white prepupae 12hr    68 white prepupae 24hr    62 pupae 2d postWPP    32 pupae 3d postWPP    22 pupae 4d postWPP    27 adult male 01day    39 adult male 05day    38 adult male 30day    35 adult female 01day  101 adult female 05day  105 adult female 30day  106 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    123 embryo 02-04hr    31 embryo 04-06hr    50 embryo 06-08hr    47 embryo 08-10hr    37 embryo 10-12hr    43 embryo 12-14hr    23 embryo 14-16hr    41 embryo 16-18hr    36 embryo 18-20hr    43 embryo 20-22hr    66 embryo 22-24hr    50 larva L1    131 larva L2    108 larva L3 12hr old    95 larva L3 puffstage 1-2    114 larva L3 puffstage 3-6    85 larva L3 puffstage 7-9    73 white prepupae new    63 white prepupae 12hr    68 white prepupae 24hr    62 pupae 2d postWPP    32 pupae 3d postWPP    22 pupae 4d postWPP    27 adult male 01day    39 adult male 05day    38 adult male 30day    35 adult female 01day    101 adult female 05day    105 adult female 30day    106 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    57 Schneider line 2 Sg4    65 embryonic 1182-4H    30 embryonic GM2    21 embryonic Kc167    28 embryonic S1    40 embryonic S3    39 leg disc CME L1    51 wing disc CME-W2    37 wing disc ML-DmD8    32 wing disc ML-DmD9    42 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    87 wing disc ML-DmD32    35 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    38 mixed discs ML-DmD4-c1    42 CNS ML-DmBG1-c1    42 CNS ML-DmBG2-c2    34 tumorous blood cells mbn2    27 ovary fGS/OSS    27 ovary OSC    21 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (57) Schneider line 2 Sg4  (65) embryonic 1182-4H  (30) embryonic GM2    21 embryonic Kc167  (28) embryonic S1  (40) embryonic S3  (39) leg disc CME L1  (51) wing disc CME-W2  (37) wing disc ML-DmD8  (32) wing disc ML-DmD9  (42) wing disc ML-DmD16-c3  (39) wing disc ML-DmD21  (87) wing disc ML-DmD32  (35) haltere disc ML-DmD17-c3  (53) eye-antennal disc ML-DmD11  26 antennal disc ML-DmD20-c5  (38) mixed discs ML-DmD4-c1  (42) CNS ML-DmBG1-c1  (42) CNS ML-DmBG2-c2  (34) tumorous blood cells mbn2  (27) ovary fGS/OSS  (27) ovary OSC    21 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    57 Schneider line 2 Sg4    65 embryonic 1182-4H    30 embryonic GM2    21 embryonic Kc167    28 embryonic S1    40 embryonic S3    39 leg disc CME L1    51 wing disc CME-W2    37 wing disc ML-DmD8    32 wing disc ML-DmD9    42 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    87 wing disc ML-DmD32    35 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    38 mixed discs ML-DmD4-c1    42 CNS ML-DmBG1-c1    42 CNS ML-DmBG2-c2    34 tumorous blood cells mbn2    27 ovary fGS/OSS    27 ovary OSC    21 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    57 Schneider line 2 Sg4    65 embryonic 1182-4H    30 embryonic GM2    21 embryonic Kc167    28 embryonic S1    40 embryonic S3    39 leg disc CME L1    51 wing disc CME-W2    37 wing disc ML-DmD8    32 wing disc ML-DmD9    42 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    87 wing disc ML-DmD32    35 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    38 mixed discs ML-DmD4-c1    42 CNS ML-DmBG1-c1    42 CNS ML-DmBG2-c2    34 tumorous blood cells mbn2    27 ovary fGS/OSS    27 ovary OSC    21 ovary OSS    11 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    57 Schneider line 2 Sg4    65 embryonic 1182-4H    30 embryonic GM2    21 embryonic Kc167    28 embryonic S1    40 embryonic S3    39 leg disc CME L1    51 wing disc CME-W2    37 wing disc ML-DmD8    32 wing disc ML-DmD9    42 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    87 wing disc ML-DmD32    35 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    38 mixed discs ML-DmD4-c1    42 CNS ML-DmBG1-c1    42 CNS ML-DmBG2-c2    34 tumorous blood cells mbn2    27 ovary fGS/OSS    27 ovary OSC    21 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (57) Schneider line 2 Sg4  (65) embryonic 1182-4H  30 embryonic GM2    21 embryonic Kc167  28 embryonic S1  (40) embryonic S3  (39) leg disc CME L1  (51) wing disc CME-W2  (37) wing disc ML-DmD8  32 wing disc ML-DmD9  (42) wing disc ML-DmD16-c3  (39) wing disc ML-DmD21  (87) wing disc ML-DmD32  (35) haltere disc ML-DmD17-c3  (53) eye-antennal disc ML-DmD11  26 antennal disc ML-DmD20-c5  (38) mixed discs ML-DmD4-c1  (42) CNS ML-DmBG1-c1  (42) CNS ML-DmBG2-c2  (34) tumorous blood cells mbn2  27 ovary fGS/OSS  27 ovary OSC    21 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    57 Schneider line 2 Sg4    65 embryonic 1182-4H    30 embryonic GM2    21 embryonic Kc167    28 embryonic S1    40 embryonic S3    39 leg disc CME L1    51 wing disc CME-W2    37 wing disc ML-DmD8    32 wing disc ML-DmD9    42 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    87 wing disc ML-DmD32    35 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    38 mixed discs ML-DmD4-c1    42 CNS ML-DmBG1-c1    42 CNS ML-DmBG2-c2    34 tumorous blood cells mbn2    27 ovary fGS/OSS    27 ovary OSC    21 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    57 Schneider line 2 Sg4    65 embryonic 1182-4H    30 embryonic GM2    21 embryonic Kc167    28 embryonic S1    40 embryonic S3    39 leg disc CME L1    51 wing disc CME-W2    37 wing disc ML-DmD8    32 wing disc ML-DmD9    42 wing disc ML-DmD16-c3    39 wing disc ML-DmD21    87 wing disc ML-DmD32    35 haltere disc ML-DmD17-c3    53 eye-antennal disc ML-DmD11    26 antennal disc ML-DmD20-c5    38 mixed discs ML-DmD4-c1    42 CNS ML-DmBG1-c1    42 CNS ML-DmBG2-c2    34 tumorous blood cells mbn2    27 ovary fGS/OSS    27 ovary OSC    21 ovary OSS    11 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    47 Cadmium 50 mM 6 hrs, larvae L3    86 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    45 Cadmium 100 mM 48 hrs, 4-day adult    32 Copper 0.5 mM 12 hrs, larvae L3    32 Copper 15 mM 48 hrs, 4-day adult    10 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    48 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    46 Caffeine 1.5 mg/ml 4 hrs, larvae L3    64 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    71 Rotenone 8 μg 12 hrs, larvae L3    88 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult  (47) Cadmium 50 mM 6 hrs, larvae L3  (86) Cadmium 50 mM 12 hrs, larvae L3  (32) Cadmium 50 mM 48 hrs, 4-day adult  (45) Cadmium 100 mM 48 hrs, 4-day adult  (32) Copper 0.5 mM 12 hrs, larvae L3  (32) Copper 15 mM 48 hrs, 4-day adult    10 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3  (48) Ethanol 5% 3 hrs, larvae L3  (45) Ethanol 10% 3 hrs, larvae L3  (46) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (64) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (28) Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult  (33) Paraquat 10 mM 48 hrs, 4-day adult  (40) Rotenone 2 μg 12 hrs, larvae L3  (71) Rotenone 8 μg 12 hrs, larvae L3  (88) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    47 Cadmium 50 mM 6 hrs, larvae L3    86 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    45 Cadmium 100 mM 48 hrs, 4-day adult    32 Copper 0.5 mM 12 hrs, larvae L3    32 Copper 15 mM 48 hrs, 4-day adult    10 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    48 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    46 Caffeine 1.5 mg/ml 4 hrs, larvae L3    64 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    71 Rotenone 8 μg 12 hrs, larvae L3    88 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    47 Cadmium 50 mM 6 hrs, larvae L3    86 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    45 Cadmium 100 mM 48 hrs, 4-day adult    32 Copper 0.5 mM 12 hrs, larvae L3    32 Copper 15 mM 48 hrs, 4-day adult    10 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    48 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    46 Caffeine 1.5 mg/ml 4 hrs, larvae L3    64 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    71 Rotenone 8 μg 12 hrs, larvae L3    88 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    47 Cadmium 50 mM 6 hrs, larvae L3    86 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    45 Cadmium 100 mM 48 hrs, 4-day adult    32 Copper 0.5 mM 12 hrs, larvae L3    32 Copper 15 mM 48 hrs, 4-day adult    10 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    48 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    46 Caffeine 1.5 mg/ml 4 hrs, larvae L3    64 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    71 Rotenone 8 μg 12 hrs, larvae L3    88 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult  (47) Cadmium 50 mM 6 hrs, larvae L3  (86) Cadmium 50 mM 12 hrs, larvae L3  32 Cadmium 50 mM 48 hrs, 4-day adult  (45) Cadmium 100 mM 48 hrs, 4-day adult  32 Copper 0.5 mM 12 hrs, larvae L3  32 Copper 15 mM 48 hrs, 4-day adult    10 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3  (48) Ethanol 5% 3 hrs, larvae L3  (45) Ethanol 10% 3 hrs, larvae L3  (46) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (64) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  28 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult  (33) Paraquat 10 mM 48 hrs, 4-day adult  (40) Rotenone 2 μg 12 hrs, larvae L3  (71) Rotenone 8 μg 12 hrs, larvae L3  (88) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    47 Cadmium 50 mM 6 hrs, larvae L3    86 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    45 Cadmium 100 mM 48 hrs, 4-day adult    32 Copper 0.5 mM 12 hrs, larvae L3    32 Copper 15 mM 48 hrs, 4-day adult    10 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    48 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    46 Caffeine 1.5 mg/ml 4 hrs, larvae L3    64 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    71 Rotenone 8 μg 12 hrs, larvae L3    88 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    20 cold shock, 4-day adult    14 heat shock, 4-day adult    47 Cadmium 50 mM 6 hrs, larvae L3    86 Cadmium 50 mM 12 hrs, larvae L3    32 Cadmium 50 mM 48 hrs, 4-day adult    45 Cadmium 100 mM 48 hrs, 4-day adult    32 Copper 0.5 mM 12 hrs, larvae L3    32 Copper 15 mM 48 hrs, 4-day adult    10 Zinc 5 mM 12 hrs, larvae L3    16 Zinc 4.5 mM 48 hrs, 4-day adult    11 Ethanol 2.5% 3 hrs, larvae L3    48 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    46 Caffeine 1.5 mg/ml 4 hrs, larvae L3    64 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    28 Caffeine 25 mg/ml 48 hrs, 4-day adult    18 Paraquat 5 mM 48 hrs, 4-day adult    33 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    71 Rotenone 8 μg 12 hrs, larvae L3    88 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_26 mE1_20_mRNA_expression_cluster_02
External Data & Images
Linkouts	BDGP expression data • LD40177 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034488 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11208-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG11208 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 7-8 Stages(s) 9-10 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele partially lethal - majority die | pupal stage, with Scer\GAL4pnr-MD237 CG11208GD2101 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG11208 Class Mutagen Stocks Known lesion CG11208KG04289 P-element activity 1 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG11208 Class Mutagen Stocks Known lesion CG11208GD2101 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG11208KK108048 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG11208NIG.11208R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD2101} NA P{KK108048} NA P{NIG.11208R} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions P{SUPor-P}CG11208KG04289 NA PBac{WH}Efhc1.2f00140 NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
magnesium ion binding inferred from electronic annotation with InterPro:IPR012000 (FlyBase Curators et al., 2004-) oxalyl-CoA decarboxylase activity inferred from sequence or structural similarity with EMBL:AL034352 (FlyBase, 1992-) thiamine pyrophosphate binding inferred from electronic annotation with InterPro:IPR011766, InterPro:IPR012000, InterPro:IPR012001 (FlyBase Curators et al., 2004-)
Biological Process ( 0 terms)
Cellular Component ( 0 terms)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
CG11208 - Aats-lys anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11208 - Arc1 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11208 - CG11777 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11208 - CG1532 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11208 - CG32758 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11208 - CG5642 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11208 - CG7049 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11208 - Cg25C anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11208 - RpS21 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11208 - Tango4 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11208 - mRpL39 anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23) CG11208 - robl anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG11208 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 62941 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0034488 DroID - A comprehensive database of gene and protein interactions. • FBgn0034488 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 37285
Orthologs
OrthoDB Orthologs (40) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG61JZXS Dipteran inclusive ortholog search EOG61ZFK3 Insect inclusive ortholog search EOG6HHMXN Arthropod inclusive ortholog search EOG6H44JX Metazoa inclusive ortholog search EOG62VN8G
Orthologs in Drosophila Species (EOG61JZXS)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG11208     Drosophila simulans   Dsim\GD25296 Y   Drosophila sechellia   Dsec\GM19803 Y   Drosophila erecta   Dere\GG20879 Y   Drosophila yakuba   Dyak\GE13819 Y   Drosophila ananassae   Dana\GF13157 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA10842 Y   Drosophila persimilis   Dper\GL10162 Y   Drosophila willistoni   Dwil\GK15680 Y   Drosophila virilis   Dvir\GJ21395 Y   Drosophila mojavensis   Dmoj\GI18529 Y   Drosophila grimshawi   Dgri\GH22747 Y
Orthologs in non-Drosophila Dipterans (EOG61ZFK3)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL014707   Aedes aegypti Yellow fever mosquito  Aaeg\AAEL009748   Anopheles gambiae Malaria mosquito  Agam\AGAP010368   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ801411   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ014172
Orthologs in non-Dipteran Insects (EOG6HHMXN)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB45184   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG005134   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH19747   Atta cephalotes Leafcutter ant  Acep\ACEP15475   Camponotus floridanus Florida carpenter ant  Cflo\CFLO13081   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL19177   Linepithema humile Argentine ant  Lhum\LH15372   Pogonomyrmex barbatus Red harvester ant  Pbar\PB18127   Acyrthosiphon pisum Pea aphid  Apim\ACYPI006395   Bombyx mori Silkmoth  Bmor\BGIBMGA009018   Pediculus humanus Human body louse  Phum\PHUM529400   Tribolium castaneum Red flour beetle  Tcas\TC005714
Orthologs in non-Insect Arthropods (EOG6H44JX)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\JGI_V11_306512   Ixodes scapularis Deer tick  Isca\ISCW012474   Ixodes scapularis Deer tick  Isca\ISCW013248
Orthologs in non-Arthropod Metazoa (EOG62VN8G)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\B0334.3   Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_000939gn   Danio rerio Zebrafish  Drer\hacl1   Xenopus tropicalis Western clawed frog  Xtro\hacl1   Gallus gallus Domestic chicken  Ggal\HACL1   Mus musculus House mouse  Mmus\Hacl1   Rattus norvegicus Norway rat  Rnor\Hacl1   Homo sapiens Human  Hsap\HACL1
Human Orthologs (1)
Gene OMIM HGNC Hsap\HACL1
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD25296 Drosophila sechellia Dsec\GM19803 Drosophila erecta Dere\GG20879 Drosophila yakuba Dyak\GE13819 Drosophila ananassae Dana\GF13157 Drosophila pseudoobscura pseudoobscura Dpse\GA10842 Drosophila persimilis Dper\GL10162 Drosophila willistoni Dwil\GK15680 Drosophila virilis Dvir\GJ21395 Drosophila mojavensis Dmoj\GI18529 Drosophila grimshawi Dgri\GH22747
Stocks & Reagents
Stocks Listed in FlyBase ( 3 )
Bloomington	13365 y1 w67c23; P{SUPor-P}CG11208KG04289
VDRC	v104378 P{KK108048}VIE-260B v4720 w1118; P{GD2101}v4720/TM3
Genomic Clones ( 2 )
	BACR23F24 BACR48L22 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 66 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LD40177
Other clones	DPiM_LD40177
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT10939 AT11119 AT17986 AT27065 GH19186 GH23630 GM07838 GM16991 GM26584 GM31317 LD12862 LD21609 LD35103 LD39931 LP08378 LP08433 LP11268 RE08545 RE08584 RE12441 RE18377 RE20638 RE21251 RE26773 RE29377 RE31946 RE35339 RE40754 RE57742 RE58679 RE60585 RE67484 RE69689 RE72479 RE73622 RH02710 RH03638 RH10583 RH18595 RH18933 RH19969 RH20163 RH20883 RH27815 RH34494 RH55256 RH70858 SD15578 SD21015 SD23107 SD24095
Other clones	124887 Dmel_neb_015379_0198_1730 HL02128 IP12029 RP001005481 RP001025597 RP001026812 RP001037655 RP001043452 RP001048163 RP001048720 RP001049974 RP001050791
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0034488 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37285
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG11208 anon-WO0118547.196 (FlyBase, 1996-)
Additional comments	Source for merge of CG11208 anon-WO0118547.196 was sequence comparison (date:051113). (FlyBase, 1996-)
Other Comments
	Area matching Drosophila EST AA696531. This EST has sequence similarity to C. elegans pro7 gene, Z66519. (Davies, 2001.3.15)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_137616 RefSeq (Proteins) • NP_611460 DDBJ / EMBL / GenBank • AA696531 AAF57501 AAL13912 AI520137 AW943498 AX094072 AY058683 BH615125 Entrez Gene - A searchable database of RefSeq genes. • 37285 UniProtKB/TrEMBL • Q7K3B7
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Thiamine pyrophosphate enzyme, C-terminal TPP-binding (IPR011766) Thiamine pyrophosphate enzyme, central domain (IPR012000) Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain (IPR012001) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • LD40177
Linkouts
	BioGRID - A database of protein and genetic interactions • 62941 DPiM - DPiM, Drosophila Protein interaction Map • FBgn0034488 DroID - A comprehensive database of gene and protein interactions. • FBgn0034488 DRSC - Results from RNAi screens. • FBgn0034488 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034488 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11208-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0034488 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37285 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 37285 modMine - Data generated by the modENCODE project. • FBgn0034488
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	anon-WO0118547.196   CG11208 (Keleman et al., 2009.8.5, Cammarato et al., 2011, Puri et al., 2008, Japanese National Institute of Genetics, 2012.5.21)
Name Synonym
Secondary FlyBase IDs
	FBgn0062177
References ( 21 )
Generate a list of	All references relating to this gene ( 21 )
List References by type	Research paper  ( 4 ) Supplementary material  ( 5 ) Personal communication to FlyBase  ( 6 ) FlyBase analysis  ( 2 ) Stock list  ( 1 ) Patent  ( 1 ) DNA/RNA sequence record  ( 1 ) Website  ( 1 )
Recent research papers (0)
	All research papers listed in FlyBase were published before 2011 Show research papers ...