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Gene Dmel\CG5819

General Information
Symbol	Dmel\CG5819	Species	D. melanogaster
Name		Annotation symbol	CG5819
Feature type	protein_coding_gene	FlyBase ID	FBgn0034717
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	58D3-58D3	Sequence location	2R:18,180,922..18,184,460 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG5819 (FBgn0034717). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. Protein features are: Cysteine-rich flanking region, C-terminal; Leucine-rich repeat. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, adult fat body, adult spermathecae, adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1624736_a_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of CG5819. Gene sequence location is 2R:18180922..18184460.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features BKN29632 HFA04520
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 58D3-58D3   Limits computationally determined from genome sequence between P{PZ}ari-207768 and P{lacW}l(2)k09801k09801
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG5819 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.40
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG5819-RA FBtr0071811  NM_137816   3146   915 CG5819-RB FBtr0071812  NM_166523   3317   915 CG5819-RC FBtr0308774     2873   915
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG5819-PA   FBpp0071724   103.4   915   6.83     NP_611660   AAF46828 CG5819-PB   FBpp0071725   103.4   915   6.83     NP_726186   AAM68218 CG5819-PC   FBpp0300937   103.4   915   6.83
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Cysteine-rich flanking region, C-terminal (IPR000483) Leucine-rich repeat (IPR001611)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE013599 AAF46828   AE013599 AAM68218   AY113398 AAM29403   BI168304   BI215196   BI234318   BI363345   BI364130   BI364927   BI374186   BI580610   BT125747   BT125761   CO190662   CO330900   ES696105   ES696106   ES696110   EV582775   GH747640   GH751288   GH760074   GH761070   GH761248   GH773690   GH781350   GH783102   GH785966   GH808826   GH837798   GH855896   GH860894   GH864247   GH880718   GH881475   GH886883   GH894292   GH898125   GH923721   GH942333
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q7JWP9
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0034717    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0034717 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0034717 expression level Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    7 embryo 04-06hr    15 embryo 06-08hr    105 embryo 08-10hr    170 embryo 10-12hr    885 embryo 12-14hr    1714 embryo 14-16hr    2002 embryo 16-18hr    2269 embryo 18-20hr    1565 embryo 20-22hr    954 embryo 22-24hr    1267 larva L1    646 larva L2    954 larva L3 12hr old    770 larva L3 puffstage 1-2    1115 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1058 white prepupae new    553 white prepupae 12hr    395 white prepupae 24hr    166 pupae 2d postWPP    103 pupae 3d postWPP    218 pupae 4d postWPP    361 adult male 01day    1029 adult male 05day    1102 adult male 30day    873 adult female 01day    588 adult female 05day    513 adult female 30day    589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    7 embryo 04-06hr    15 embryo 06-08hr  105 embryo 08-10hr  (170) embryo 10-12hr  (885) embryo 12-14hr  (1714) embryo 14-16hr  (2002) embryo 16-18hr  (2269) embryo 18-20hr  (1565) embryo 20-22hr  (954) embryo 22-24hr  (1267) larva L1  (646) larva L2  (954) larva L3 12hr old  (770) larva L3 puffstage 1-2  (1115) larva L3 puffstage 3-6  (1239) larva L3 puffstage 7-9  (1058) white prepupae new  (553) white prepupae 12hr  (395) white prepupae 24hr  (166) pupae 2d postWPP  103 pupae 3d postWPP  (218) pupae 4d postWPP  (361) adult male 01day  (1029) adult male 05day  (1102) adult male 30day  (873) adult female 01day  (588) adult female 05day  (513) adult female 30day  (589) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    7 embryo 04-06hr    15 embryo 06-08hr    105 embryo 08-10hr    170 embryo 10-12hr    885 embryo 12-14hr  (1714) embryo 14-16hr  (2002) embryo 16-18hr  (2269) embryo 18-20hr  (1565) embryo 20-22hr    954 embryo 22-24hr    1267 larva L1    646 larva L2    954 larva L3 12hr old    770 larva L3 puffstage 1-2    1115 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1058 white prepupae new    553 white prepupae 12hr    395 white prepupae 24hr    166 pupae 2d postWPP    103 pupae 3d postWPP    218 pupae 4d postWPP    361 adult male 01day    1029 adult male 05day    1102 adult male 30day    873 adult female 01day    588 adult female 05day    513 adult female 30day    589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    7 embryo 04-06hr    15 embryo 06-08hr    105 embryo 08-10hr    170 embryo 10-12hr    885 embryo 12-14hr    1714 embryo 14-16hr    2002 embryo 16-18hr    2269 embryo 18-20hr    1565 embryo 20-22hr    954 embryo 22-24hr    1267 larva L1    646 larva L2    954 larva L3 12hr old    770 larva L3 puffstage 1-2    1115 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1058 white prepupae new    553 white prepupae 12hr    395 white prepupae 24hr    166 pupae 2d postWPP    103 pupae 3d postWPP    218 pupae 4d postWPP    361 adult male 01day    1029 adult male 05day    1102 adult male 30day    873 adult female 01day    588 adult female 05day    513 adult female 30day    589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    7 embryo 04-06hr    15 embryo 06-08hr    105 embryo 08-10hr    170 embryo 10-12hr    885 embryo 12-14hr    1714 embryo 14-16hr    2002 embryo 16-18hr    2269 embryo 18-20hr    1565 embryo 20-22hr    954 embryo 22-24hr    1267 larva L1    646 larva L2    954 larva L3 12hr old    770 larva L3 puffstage 1-2    1115 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1058 white prepupae new    553 white prepupae 12hr    395 white prepupae 24hr    166 pupae 2d postWPP    103 pupae 3d postWPP    218 pupae 4d postWPP    361 adult male 01day    1029 adult male 05day    1102 adult male 30day    873 adult female 01day    588 adult female 05day    513 adult female 30day    589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0034717 expression level Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    7 embryo 04-06hr    15 embryo 06-08hr    105 embryo 08-10hr    170 embryo 10-12hr    885 embryo 12-14hr    1714 embryo 14-16hr    2002 embryo 16-18hr    2269 embryo 18-20hr    1565 embryo 20-22hr    954 embryo 22-24hr    1267 larva L1    646 larva L2    954 larva L3 12hr old    770 larva L3 puffstage 1-2    1115 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1058 white prepupae new    553 white prepupae 12hr    395 white prepupae 24hr    166 pupae 2d postWPP    103 pupae 3d postWPP    218 pupae 4d postWPP    361 adult male 01day    1029 adult male 05day    1102 adult male 30day    873 adult female 01day    588 adult female 05day    513 adult female 30day    589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    7 embryo 04-06hr    15 embryo 06-08hr  105 embryo 08-10hr  (170) embryo 10-12hr  (885) embryo 12-14hr  (1714) embryo 14-16hr  (2002) embryo 16-18hr  (2269) embryo 18-20hr  (1565) embryo 20-22hr  (954) embryo 22-24hr  (1267) larva L1  (646) larva L2  (954) larva L3 12hr old  (770) larva L3 puffstage 1-2  (1115) larva L3 puffstage 3-6  (1239) larva L3 puffstage 7-9  (1058) white prepupae new  (553) white prepupae 12hr  (395) white prepupae 24hr  (166) pupae 2d postWPP  103 pupae 3d postWPP  (218) pupae 4d postWPP  (361) adult male 01day  (1029) adult male 05day  (1102) adult male 30day  (873) adult female 01day  (588) adult female 05day  (513) adult female 30day  (589) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    7 embryo 04-06hr    15 embryo 06-08hr    105 embryo 08-10hr    170 embryo 10-12hr    885 embryo 12-14hr  1714 embryo 14-16hr  2002 embryo 16-18hr  2269 embryo 18-20hr  1565 embryo 20-22hr    954 embryo 22-24hr    1267 larva L1    646 larva L2    954 larva L3 12hr old    770 larva L3 puffstage 1-2    1115 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1058 white prepupae new    553 white prepupae 12hr    395 white prepupae 24hr    166 pupae 2d postWPP    103 pupae 3d postWPP    218 pupae 4d postWPP    361 adult male 01day    1029 adult male 05day    1102 adult male 30day    873 adult female 01day    588 adult female 05day    513 adult female 30day    589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    7 embryo 04-06hr    15 embryo 06-08hr    105 embryo 08-10hr    170 embryo 10-12hr    885 embryo 12-14hr    1714 embryo 14-16hr    2002 embryo 16-18hr    2269 embryo 18-20hr    1565 embryo 20-22hr    954 embryo 22-24hr    1267 larva L1    646 larva L2    954 larva L3 12hr old    770 larva L3 puffstage 1-2    1115 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1058 white prepupae new    553 white prepupae 12hr    395 white prepupae 24hr    166 pupae 2d postWPP    103 pupae 3d postWPP    218 pupae 4d postWPP    361 adult male 01day    1029 adult male 05day    1102 adult male 30day    873 adult female 01day    588 adult female 05day    513 adult female 30day    589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    8 embryo 02-04hr    7 embryo 04-06hr    15 embryo 06-08hr    105 embryo 08-10hr    170 embryo 10-12hr    885 embryo 12-14hr    1714 embryo 14-16hr    2002 embryo 16-18hr    2269 embryo 18-20hr    1565 embryo 20-22hr    954 embryo 22-24hr    1267 larva L1    646 larva L2    954 larva L3 12hr old    770 larva L3 puffstage 1-2    1115 larva L3 puffstage 3-6    1239 larva L3 puffstage 7-9    1058 white prepupae new    553 white prepupae 12hr    395 white prepupae 24hr    166 pupae 2d postWPP    103 pupae 3d postWPP    218 pupae 4d postWPP    361 adult male 01day    1029 adult male 05day    1102 adult male 30day    873 adult female 01day    588 adult female 05day    513 adult female 30day    589 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0034717    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0034717 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult Malpighian tubules. Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult midgut, larval/adult hindgut, larval Malpighian tubules, adult heart, adult fat body, adult spermathecae, adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0034717 expression level Tissue   Expression Level Larval Central Nervous System    3.325 Larval Midgut    431.2 Larval Hindgut    143.2 Larval Malpighian Tubules    433.1 Larval Fat Body    6.2 Larval Salivary Gland    3.4 Larval Trachea    5.85 Larval Carcass    2.525 Adult Head    71.1 Adult Eye    46.075 Adult Brain    6.8 Adult Thoracic-Abdominal Ganglion    4.5 Adult Crop no informative data Adult Midgut    339.1 Adult Hindgut    113.5 Adult Malpighian Tubules    688.9 Adult Fat Body    311.5 Adult Salivary Gland no informative data Adult Heart    139.675 Adult VirginFemale Spermatheca    410.2 Adult InseminatedFemale Spermatheca    271.2 Adult Ovary    1.2 Adult Testis    2.3 Adult Male Accessory Gland no informative data Adult Carcass    135.3 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    3.325 Larval Midgut    431.2 Larval Hindgut    143.2 Larval Malpighian Tubules    433.1 Larval Fat Body    6.2 Larval Salivary Gland    3.4 Larval Trachea    5.85 Larval Carcass    2.525 Adult Head    71.1 Adult Eye    46.075 Adult Brain    6.8 Adult Thoracic-Abdominal Ganglion    4.5 Adult Crop no informative data Adult Midgut    339.1 Adult Hindgut    113.5 Adult Malpighian Tubules  (688.9) Adult Fat Body    311.5 Adult Salivary Gland no informative data Adult Heart    139.675 Adult VirginFemale Spermatheca    410.2 Adult InseminatedFemale Spermatheca    271.2 Adult Ovary    1.2 Adult Testis    2.3 Adult Male Accessory Gland no informative data Adult Carcass    135.3 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    3.325 Larval Midgut    431.2 Larval Hindgut    143.2 Larval Malpighian Tubules    433.1 Larval Fat Body    6.2 Larval Salivary Gland    3.4 Larval Trachea    5.85 Larval Carcass    2.525 Adult Head    71.1 Adult Eye    46.075 Adult Brain    6.8 Adult Thoracic-Abdominal Ganglion    4.5 Adult Crop no informative data Adult Midgut    339.1 Adult Hindgut    113.5 Adult Malpighian Tubules    688.9 Adult Fat Body    311.5 Adult Salivary Gland no informative data Adult Heart    139.675 Adult VirginFemale Spermatheca    410.2 Adult InseminatedFemale Spermatheca    271.2 Adult Ovary    1.2 Adult Testis    2.3 Adult Male Accessory Gland no informative data Adult Carcass    135.3 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    3.325 Larval Midgut    431.2 Larval Hindgut    143.2 Larval Malpighian Tubules    433.1 Larval Fat Body    6.2 Larval Salivary Gland    3.4 Larval Trachea    5.85 Larval Carcass    2.525 Adult Head    71.1 Adult Eye    46.075 Adult Brain    6.8 Adult Thoracic-Abdominal Ganglion    4.5 Adult Crop no informative data Adult Midgut    339.1 Adult Hindgut    113.5 Adult Malpighian Tubules    688.9 Adult Fat Body    311.5 Adult Salivary Gland no informative data Adult Heart    139.675 Adult VirginFemale Spermatheca    410.2 Adult InseminatedFemale Spermatheca    271.2 Adult Ovary    1.2 Adult Testis    2.3 Adult Male Accessory Gland no informative data Adult Carcass    135.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0034717 expression level Tissue   Expression Level Larval Central Nervous System    3.325 Larval Midgut    431.2 Larval Hindgut    143.2 Larval Malpighian Tubules    433.1 Larval Fat Body    6.2 Larval Salivary Gland    3.4 Larval Trachea    5.85 Larval Carcass    2.525 Adult Head    71.1 Adult Eye    46.075 Adult Brain    6.8 Adult Thoracic-Abdominal Ganglion    4.5 Adult Crop no informative data Adult Midgut    339.1 Adult Hindgut    113.5 Adult Malpighian Tubules    688.9 Adult Fat Body    311.5 Adult Salivary Gland no informative data Adult Heart    139.675 Adult VirginFemale Spermatheca    410.2 Adult InseminatedFemale Spermatheca    271.2 Adult Ovary    1.2 Adult Testis    2.3 Adult Male Accessory Gland no informative data Adult Carcass    135.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    3.325 Larval Midgut    431.2 Larval Hindgut    143.2 Larval Malpighian Tubules    433.1 Larval Fat Body    6.2 Larval Salivary Gland    3.4 Larval Trachea    5.85 Larval Carcass    2.525 Adult Head    71.1 Adult Eye    46.075 Adult Brain    6.8 Adult Thoracic-Abdominal Ganglion    4.5 Adult Crop no informative data Adult Midgut    339.1 Adult Hindgut    113.5 Adult Malpighian Tubules  688.9 Adult Fat Body    311.5 Adult Salivary Gland no informative data Adult Heart    139.675 Adult VirginFemale Spermatheca    410.2 Adult InseminatedFemale Spermatheca    271.2 Adult Ovary    1.2 Adult Testis    2.3 Adult Male Accessory Gland no informative data Adult Carcass    135.3 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    3.325 Larval Midgut    431.2 Larval Hindgut    143.2 Larval Malpighian Tubules    433.1 Larval Fat Body    6.2 Larval Salivary Gland    3.4 Larval Trachea    5.85 Larval Carcass    2.525 Adult Head    71.1 Adult Eye    46.075 Adult Brain    6.8 Adult Thoracic-Abdominal Ganglion    4.5 Adult Crop no informative data Adult Midgut    339.1 Adult Hindgut    113.5 Adult Malpighian Tubules    688.9 Adult Fat Body    311.5 Adult Salivary Gland no informative data Adult Heart    139.675 Adult VirginFemale Spermatheca    410.2 Adult InseminatedFemale Spermatheca    271.2 Adult Ovary    1.2 Adult Testis    2.3 Adult Male Accessory Gland no informative data Adult Carcass    135.3 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    3.325 Larval Midgut    431.2 Larval Hindgut    143.2 Larval Malpighian Tubules    433.1 Larval Fat Body    6.2 Larval Salivary Gland    3.4 Larval Trachea    5.85 Larval Carcass    2.525 Adult Head    71.1 Adult Eye    46.075 Adult Brain    6.8 Adult Thoracic-Abdominal Ganglion    4.5 Adult Crop no informative data Adult Midgut    339.1 Adult Hindgut    113.5 Adult Malpighian Tubules    688.9 Adult Fat Body    311.5 Adult Salivary Gland no informative data Adult Heart    139.675 Adult VirginFemale Spermatheca    410.2 Adult InseminatedFemale Spermatheca    271.2 Adult Ovary    1.2 Adult Testis    2.3 Adult Male Accessory Gland no informative data Adult Carcass    135.3 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop no informative data Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland no informative data Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    71.1   NA  Eye    46.075   NA  Brain    6.8   3.325  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    4.5   NA  Crop    no informative data   431.2  Midgut    339.1   143.2  Hindgut    113.5   433.1  Malpighian Tubules    688.9   6.2  Fat Body    311.5   3.4  Salivary Gland    no informative data   NA  Heart    139.675   5.85  Trachea    NA   NA  VirginFemale Spermatheca    410.2   NA  InseminatedFemale Spermatheca    271.2   NA  Ovary    1.2   NA  Testis    2.3   NA  Male Accessory Gland    no informative data   2.525  Carcass    135.3 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_18
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034717 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5819-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG5819 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG5819GD37 CG5819GD2533 CG5819GD14412 Phenotype manifest in Allele
Classical Alleles ( 1 )
For All Classical Alleles Show
Allele of CG5819 Class Mutagen Stocks Known lesion CG5819MB11253 1 --
Alleles Carried on Transgenic Constructs ( 4 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG5819 Class Mutagen Stocks Known lesion CG5819GD37 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG5819GD14412 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG5819GD2533 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG5819HM05258 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD37} NA P{GD2533} NA P{GD14412} NA P{TRiP.HM05258} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap binary system Mi{ET1}CG5819MB11253 No
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG5819 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0034717 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 37547
Orthologs
Genome-wide drosophilid orthologs	Dana\GF12620 Dere\GG22177 Dgri\GH21454 Dmoj\GI19930 Dper\GL17533 Dpse\GA19153 Dsec\GM15898 Dsim\GD11657 Dvir\GJ15097 Dwil\GK20808 Dyak\GE14171
Curated drosophilid orthologs	Dpse\GA19153
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL012093-PA Aedes aegypti (mosquito) AGAP006643-PA Anopheles gambiae (mosquito) XP_001952692.1 Acyrthosiphon pisum (pea aphid) BGIBMGA002617-PA Bombyx mori (silk worm) CPIJ005191 Culex pipens (mosquito) ENSGACP00000006345 Gymnopilus aculeatus (mushroom) ENSGACP00000017208 Gymnopilus aculeatus (mushroom) XP_001606284.1 Nasonia vitripennis (wasp) 136637 Phytophthora sojae (root rot pathogen) XP_968007.1 Tribolium castaneum (red flour beetle) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV13501 LH12932 ISCW020221 FBgn0231793 FBgn0222804 FBgn0202296 FBgn0183397 FBgn0170814 FBgn0079150 FBgn0155136 FBgn0142667 FBgn0128916 FBgn0114351 FBgn0089656 CPIJ005191 BGIBMGA002617 BGIBMGA002616 ACYPI002430 GB17257 AGAP006643 AAEL012093 PB21135 PHUM519260 GLEAN_01742
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	27859 w1118; Mi{ET1}CG5819MB11253 31867 y1 sc* v1; P{TRiP.HM05258}attP2/TM3, Sb1
VDRC	v837 w1118 P{GD37}v837 v836 w1118; P{GD37}v836 v7998 w1118; P{GD2533}v7998 v27076 w1118; P{GD14412}v27076
Genomic Clones ( 1 )
	BACR02I11 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 34 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE09008
Other clones	RT10385 RT10387
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	RE21536 RE30008 RE48128 RE49182 RE50128 RE61715 RE74826
Other clones	Dmel_dig_011666_0646_0784 EK049009 EK296409 RP003066354 RP003090759 RP003109659 RP003109980 RP003122464 RP003149734 RP003193720 RP003263020 RP003290903 RP003337203 RP003341661 RP003347240 RP003372502 RP003384286 RP003413875 RP003421419 RP003437753 RP003480194 RP003518851 RP003634355 RP003670742
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0034717 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37547
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_137816 NM_166523 RefSeq (Proteins) • NP_611660 NP_726186 DDBJ / EMBL / GenBank • AAF46828 AAM29403 AAM68218 AY113398 BI168304 Entrez Gene - A searchable database of RefSeq genes. • 37547 UniProtKB/TrEMBL • Q7JWP9
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Cysteine-rich flanking region, C-terminal (IPR000483) Leucine-rich repeat (IPR001611)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0034717 DRSC - Results from RNAi screens. • FBgn0034717 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034717 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG5819-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0034717 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37547 InParanoid A subset of ortholog calls from InParanoid. • AAEL012093-PA Aedes aegypti (mosquito) AGAP006643-PA Anopheles gambiae (mosquito) XP_001952692.1 Acyrthosiphon pisum (pea aphid) BGIBMGA002617-PA Bombyx mori (silk worm) CPIJ005191 Culex pipens (mosquito) ENSGACP00000006345 Gymnopilus aculeatus (mushroom) ENSGACP00000017208 Gymnopilus aculeatus (mushroom) XP_001606284.1 Nasonia vitripennis (wasp) 136637 Phytophthora sojae (root rot pathogen) XP_968007.1 Tribolium castaneum (red flour beetle) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 37547 modMine - Data generated by the modENCODE project. • FBgn0034717 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV13501 LH12932 ISCW020221 FBgn0231793 FBgn0222804 FBgn0202296 FBgn0183397 FBgn0170814 FBgn0079150 FBgn0155136 FBgn0142667 FBgn0128916 FBgn0114351 FBgn0089656 CPIJ005191 BGIBMGA002617 BGIBMGA002616 ACYPI002430 GB17257 AGAP006643 AAEL012093 PB21135 PHUM519260 GLEAN_01742
Synonyms & Secondary IDs ( 3 )
Reported As
Symbol Synonym	CG5819 (Huet et al., 2002, Perkins et al., 2009) CT18212 (Hynes and Zhao, 2000) tartan/capricious-like (Hynes and Zhao, 2000)
Name Synonym
Secondary FlyBase IDs
References ( 12 )
Research paper	Huet et al., 2002, Proc. Natl. Acad. Sci. USA 99(15): 9948--9953 A deletion-generator compound element allows deletion saturation analysis for genomewide phenotypic annotation. [FBrf0151478]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Hynes and Zhao, 2000, J. Cell Biol. 150(2): Table S7. LRR repeat-containing proteins. [FBrf0132111]
Personal communication to FlyBase	Bellen, 2009.5.28, MB857859.xml MB857859.xml [FBrf0208089] Perkins et al., 2009, Update to TRiP stock collection. Update to TRiP stock collection. [FBrf0208864] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Zhao, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126701]