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Gene Dmel\CG6044

General Information
Symbol	Dmel\CG6044	Species	D. melanogaster
Name		Annotation symbol	CG6044
Feature type	protein_coding_gene	FlyBase ID	FBgn0034725
Gene Model Status	Current	Stock availability	6 publicly available
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	58D4-58D7	Sequence location	2R:18,291,678..18,295,880 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG6044 (FBgn0034725). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. The biological processes in which it is involved are not known. 7 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Immunoglobulin-like; Immunoglobulin-like fold. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in stages of adults of both sexes. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system. Comments on Affy2 ProbeSet: ProbeSet 1629897_a_at completely aligns to an exonic region common to each of the 4 FlyBase-annotated transcript isoforms of CG6044. Gene sequence location is 2R:18291678..18295880.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2011_10
FB2012_01	Sequence features BKN29635 HFA04522
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 58D4-58D7   Limits computationally determined from genome sequence between P{lacW}l(2)k13211k13211&P{EP}EP827 and P{PZ}l(2)rG270rG270
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG6044 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG6044-RA FBtr0071823  NM_137824   1488   229 CG6044-RD FBtr0113108  NM_001103946   1240   99 CG6044-RE FBtr0301188  NM_206201   1512   99 CG6044-RF FBtr0301242  NM_001169781   1227   218
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG6044-PA   FBpp0071734   24.4   229   5.54     NP_611668   AAF46841 CG6044-PD   FBpp0112021   10.8   99   5.53     NP_001097416   AAM68223 CG6044-PE   FBpp0290406   10.8   99   5.53     NP_995923   AAS64757 CG6044-PF   FBpp0290460   23.4   218   5.93     NP_001163252   ACZ94524
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Immunoglobulin-like (IPR007110) Immunoglobulin-like fold (IPR013783)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE013599 AAF46841   AE013599 AAM68223   AE013599 AAS64757   AE013599 ACZ94524   AI063919   AI134985   AI258464   AI403417   AW943979   AY070893   AY113569 AAM29574   BI586582   BI592661   BI608932   BI615359   BI624905   BT001828 AAN71583   CO178741   CO292413   CO316766   CO340661   CO344035   CZ478010   EC089422   EC199823   EC218730   EC224048   EC232414   EC238846   EC253242   EC253757   EC253856   EL873098   EL873186   EL873281   GH942688   GH945813   GH958050   GH958647   GH962039   GH973102
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8IGD8 Q8MLT3 Q9W257 E1JGS3
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0034725    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0034725 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 18-24 hour embryonic stages, during late larval stages, at stages throughout the pupal period, in stages of adults of both sexes. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0034725 expression level Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    17 embryo 04-06hr    39 embryo 06-08hr    43 embryo 08-10hr    48 embryo 10-12hr    41 embryo 12-14hr    49 embryo 14-16hr    110 embryo 16-18hr    243 embryo 18-20hr    421 embryo 20-22hr    398 embryo 22-24hr    457 larva L1    275 larva L2    146 larva L3 12hr old    84 larva L3 puffstage 1-2    134 larva L3 puffstage 3-6    221 larva L3 puffstage 7-9    454 white prepupae new    643 white prepupae 12hr    706 white prepupae 24hr    927 pupae 2d postWPP    579 pupae 3d postWPP    966 pupae 4d postWPP    828 adult male 01day    1053 adult male 05day    1117 adult male 30day    928 adult female 01day    467 adult female 05day    176 adult female 30day    186 Expression Level Scale  None   Extremely low   Very low   Low   Moderate  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    17 embryo 04-06hr    39 embryo 06-08hr    43 embryo 08-10hr    48 embryo 10-12hr    41 embryo 12-14hr    49 embryo 14-16hr  (110) embryo 16-18hr  (243) embryo 18-20hr  (421) embryo 20-22hr  (398) embryo 22-24hr  (457) larva L1  (275) larva L2  (146) larva L3 12hr old    84 larva L3 puffstage 1-2  (134) larva L3 puffstage 3-6  (221) larva L3 puffstage 7-9  (454) white prepupae new  (643) white prepupae 12hr  (706) white prepupae 24hr  (927) pupae 2d postWPP  (579) pupae 3d postWPP  (966) pupae 4d postWPP  (828) adult male 01day  (1053) adult male 05day  (1117) adult male 30day  (928) adult female 01day  (467) adult female 05day  (176) adult female 30day  (186) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    17 embryo 04-06hr    39 embryo 06-08hr    43 embryo 08-10hr    48 embryo 10-12hr    41 embryo 12-14hr    49 embryo 14-16hr    110 embryo 16-18hr    243 embryo 18-20hr    421 embryo 20-22hr    398 embryo 22-24hr    457 larva L1    275 larva L2    146 larva L3 12hr old    84 larva L3 puffstage 1-2    134 larva L3 puffstage 3-6    221 larva L3 puffstage 7-9    454 white prepupae new    643 white prepupae 12hr    706 white prepupae 24hr    927 pupae 2d postWPP    579 pupae 3d postWPP    966 pupae 4d postWPP    828 adult male 01day    1053 adult male 05day    1117 adult male 30day    928 adult female 01day    467 adult female 05day    176 adult female 30day    186 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    17 embryo 04-06hr    39 embryo 06-08hr    43 embryo 08-10hr    48 embryo 10-12hr    41 embryo 12-14hr    49 embryo 14-16hr    110 embryo 16-18hr    243 embryo 18-20hr    421 embryo 20-22hr    398 embryo 22-24hr    457 larva L1    275 larva L2    146 larva L3 12hr old    84 larva L3 puffstage 1-2    134 larva L3 puffstage 3-6    221 larva L3 puffstage 7-9    454 white prepupae new    643 white prepupae 12hr    706 white prepupae 24hr    927 pupae 2d postWPP    579 pupae 3d postWPP    966 pupae 4d postWPP    828 adult male 01day    1053 adult male 05day    1117 adult male 30day    928 adult female 01day    467 adult female 05day    176 adult female 30day    186 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    17 embryo 04-06hr    39 embryo 06-08hr    43 embryo 08-10hr    48 embryo 10-12hr    41 embryo 12-14hr    49 embryo 14-16hr    110 embryo 16-18hr    243 embryo 18-20hr    421 embryo 20-22hr    398 embryo 22-24hr    457 larva L1    275 larva L2    146 larva L3 12hr old    84 larva L3 puffstage 1-2    134 larva L3 puffstage 3-6    221 larva L3 puffstage 7-9    454 white prepupae new    643 white prepupae 12hr    706 white prepupae 24hr    927 pupae 2d postWPP    579 pupae 3d postWPP    966 pupae 4d postWPP    828 adult male 01day    1053 adult male 05day    1117 adult male 30day    928 adult female 01day    467 adult female 05day    176 adult female 30day    186 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0034725 expression level Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    17 embryo 04-06hr    39 embryo 06-08hr    43 embryo 08-10hr    48 embryo 10-12hr    41 embryo 12-14hr    49 embryo 14-16hr    110 embryo 16-18hr    243 embryo 18-20hr    421 embryo 20-22hr    398 embryo 22-24hr    457 larva L1    275 larva L2    146 larva L3 12hr old    84 larva L3 puffstage 1-2    134 larva L3 puffstage 3-6    221 larva L3 puffstage 7-9    454 white prepupae new    643 white prepupae 12hr    706 white prepupae 24hr    927 pupae 2d postWPP    579 pupae 3d postWPP    966 pupae 4d postWPP    828 adult male 01day    1053 adult male 05day    1117 adult male 30day    928 adult female 01day    467 adult female 05day    176 adult female 30day    186 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    17 embryo 04-06hr    39 embryo 06-08hr    43 embryo 08-10hr    48 embryo 10-12hr    41 embryo 12-14hr    49 embryo 14-16hr  110 embryo 16-18hr  (243) embryo 18-20hr  (421) embryo 20-22hr  (398) embryo 22-24hr  (457) larva L1  (275) larva L2  (146) larva L3 12hr old    84 larva L3 puffstage 1-2  134 larva L3 puffstage 3-6  (221) larva L3 puffstage 7-9  (454) white prepupae new  (643) white prepupae 12hr  (706) white prepupae 24hr  (927) pupae 2d postWPP  (579) pupae 3d postWPP  (966) pupae 4d postWPP  (828) adult male 01day  (1053) adult male 05day  (1117) adult male 30day  (928) adult female 01day  (467) adult female 05day  (176) adult female 30day  (186) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    17 embryo 04-06hr    39 embryo 06-08hr    43 embryo 08-10hr    48 embryo 10-12hr    41 embryo 12-14hr    49 embryo 14-16hr    110 embryo 16-18hr    243 embryo 18-20hr    421 embryo 20-22hr    398 embryo 22-24hr    457 larva L1    275 larva L2    146 larva L3 12hr old    84 larva L3 puffstage 1-2    134 larva L3 puffstage 3-6    221 larva L3 puffstage 7-9    454 white prepupae new    643 white prepupae 12hr    706 white prepupae 24hr    927 pupae 2d postWPP    579 pupae 3d postWPP    966 pupae 4d postWPP    828 adult male 01day    1053 adult male 05day    1117 adult male 30day    928 adult female 01day    467 adult female 05day    176 adult female 30day    186 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    17 embryo 04-06hr    39 embryo 06-08hr    43 embryo 08-10hr    48 embryo 10-12hr    41 embryo 12-14hr    49 embryo 14-16hr    110 embryo 16-18hr    243 embryo 18-20hr    421 embryo 20-22hr    398 embryo 22-24hr    457 larva L1    275 larva L2    146 larva L3 12hr old    84 larva L3 puffstage 1-2    134 larva L3 puffstage 3-6    221 larva L3 puffstage 7-9    454 white prepupae new    643 white prepupae 12hr    706 white prepupae 24hr    927 pupae 2d postWPP    579 pupae 3d postWPP    966 pupae 4d postWPP    828 adult male 01day    1053 adult male 05day    1117 adult male 30day    928 adult female 01day    467 adult female 05day    176 adult female 30day    186 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    10 embryo 02-04hr    17 embryo 04-06hr    39 embryo 06-08hr    43 embryo 08-10hr    48 embryo 10-12hr    41 embryo 12-14hr    49 embryo 14-16hr    110 embryo 16-18hr    243 embryo 18-20hr    421 embryo 20-22hr    398 embryo 22-24hr    457 larva L1    275 larva L2    146 larva L3 12hr old    84 larva L3 puffstage 1-2    134 larva L3 puffstage 3-6    221 larva L3 puffstage 7-9    454 white prepupae new    643 white prepupae 12hr    706 white prepupae 24hr    927 pupae 2d postWPP    579 pupae 3d postWPP    966 pupae 4d postWPP    828 adult male 01day    1053 adult male 05day    1117 adult male 30day    928 adult female 01day    467 adult female 05day    176 adult female 30day    186 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0034725    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0034725 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult head, adult eye, adult central nervous system. Expression at moderate levels in the following post-embryonic organs or tissues: larval central nervous system. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0034725 expression level Tissue   Expression Level Larval Central Nervous System    156.6 Larval Midgut    22.7 Larval Hindgut    7.9 Larval Malpighian Tubules    3.9 Larval Fat Body    3.1 Larval Salivary Gland    7.4 Larval Trachea    26.725 Larval Carcass    18.75 Adult Head    599.6 Adult Eye    1152.725 Adult Brain    1462 Adult Thoracic-Abdominal Ganglion    1800.6 Adult Crop    3.5 Adult Midgut    3.9 Adult Hindgut    6.3 Adult Malpighian Tubules    4.4 Adult Fat Body no informative data Adult Salivary Gland    7.5 Adult Heart    11.625 Adult VirginFemale Spermatheca    5.5 Adult InseminatedFemale Spermatheca    4.3 Adult Ovary    5.4 Adult Testis    6.6 Adult Male Accessory Gland    7.7 Adult Carcass    40.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    156.6 Larval Midgut    22.7 Larval Hindgut    7.9 Larval Malpighian Tubules    3.9 Larval Fat Body    3.1 Larval Salivary Gland    7.4 Larval Trachea    26.725 Larval Carcass    18.75 Adult Head  (599.6) Adult Eye  (1152.725) Adult Brain  (1462) Adult Thoracic-Abdominal Ganglion  (1800.6) Adult Crop    3.5 Adult Midgut    3.9 Adult Hindgut    6.3 Adult Malpighian Tubules    4.4 Adult Fat Body no informative data Adult Salivary Gland    7.5 Adult Heart    11.625 Adult VirginFemale Spermatheca    5.5 Adult InseminatedFemale Spermatheca    4.3 Adult Ovary    5.4 Adult Testis    6.6 Adult Male Accessory Gland    7.7 Adult Carcass    40.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    156.6 Larval Midgut    22.7 Larval Hindgut    7.9 Larval Malpighian Tubules    3.9 Larval Fat Body    3.1 Larval Salivary Gland    7.4 Larval Trachea    26.725 Larval Carcass    18.75 Adult Head    599.6 Adult Eye  (1152.725) Adult Brain  (1462) Adult Thoracic-Abdominal Ganglion  (1800.6) Adult Crop    3.5 Adult Midgut    3.9 Adult Hindgut    6.3 Adult Malpighian Tubules    4.4 Adult Fat Body no informative data Adult Salivary Gland    7.5 Adult Heart    11.625 Adult VirginFemale Spermatheca    5.5 Adult InseminatedFemale Spermatheca    4.3 Adult Ovary    5.4 Adult Testis    6.6 Adult Male Accessory Gland    7.7 Adult Carcass    40.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    156.6 Larval Midgut    22.7 Larval Hindgut    7.9 Larval Malpighian Tubules    3.9 Larval Fat Body    3.1 Larval Salivary Gland    7.4 Larval Trachea    26.725 Larval Carcass    18.75 Adult Head    599.6 Adult Eye    1152.725 Adult Brain    1462 Adult Thoracic-Abdominal Ganglion    1800.6 Adult Crop    3.5 Adult Midgut    3.9 Adult Hindgut    6.3 Adult Malpighian Tubules    4.4 Adult Fat Body no informative data Adult Salivary Gland    7.5 Adult Heart    11.625 Adult VirginFemale Spermatheca    5.5 Adult InseminatedFemale Spermatheca    4.3 Adult Ovary    5.4 Adult Testis    6.6 Adult Male Accessory Gland    7.7 Adult Carcass    40.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0034725 expression level Tissue   Expression Level Larval Central Nervous System    156.6 Larval Midgut    22.7 Larval Hindgut    7.9 Larval Malpighian Tubules    3.9 Larval Fat Body    3.1 Larval Salivary Gland    7.4 Larval Trachea    26.725 Larval Carcass    18.75 Adult Head    599.6 Adult Eye    1152.725 Adult Brain    1462 Adult Thoracic-Abdominal Ganglion    1800.6 Adult Crop    3.5 Adult Midgut    3.9 Adult Hindgut    6.3 Adult Malpighian Tubules    4.4 Adult Fat Body no informative data Adult Salivary Gland    7.5 Adult Heart    11.625 Adult VirginFemale Spermatheca    5.5 Adult InseminatedFemale Spermatheca    4.3 Adult Ovary    5.4 Adult Testis    6.6 Adult Male Accessory Gland    7.7 Adult Carcass    40.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    156.6 Larval Midgut    22.7 Larval Hindgut    7.9 Larval Malpighian Tubules    3.9 Larval Fat Body    3.1 Larval Salivary Gland    7.4 Larval Trachea    26.725 Larval Carcass    18.75 Adult Head  599.6 Adult Eye  (1152.725) Adult Brain  (1462) Adult Thoracic-Abdominal Ganglion  (1800.6) Adult Crop    3.5 Adult Midgut    3.9 Adult Hindgut    6.3 Adult Malpighian Tubules    4.4 Adult Fat Body no informative data Adult Salivary Gland    7.5 Adult Heart    11.625 Adult VirginFemale Spermatheca    5.5 Adult InseminatedFemale Spermatheca    4.3 Adult Ovary    5.4 Adult Testis    6.6 Adult Male Accessory Gland    7.7 Adult Carcass    40.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    156.6 Larval Midgut    22.7 Larval Hindgut    7.9 Larval Malpighian Tubules    3.9 Larval Fat Body    3.1 Larval Salivary Gland    7.4 Larval Trachea    26.725 Larval Carcass    18.75 Adult Head    599.6 Adult Eye  1152.725 Adult Brain  1462 Adult Thoracic-Abdominal Ganglion  (1800.6) Adult Crop    3.5 Adult Midgut    3.9 Adult Hindgut    6.3 Adult Malpighian Tubules    4.4 Adult Fat Body no informative data Adult Salivary Gland    7.5 Adult Heart    11.625 Adult VirginFemale Spermatheca    5.5 Adult InseminatedFemale Spermatheca    4.3 Adult Ovary    5.4 Adult Testis    6.6 Adult Male Accessory Gland    7.7 Adult Carcass    40.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    156.6 Larval Midgut    22.7 Larval Hindgut    7.9 Larval Malpighian Tubules    3.9 Larval Fat Body    3.1 Larval Salivary Gland    7.4 Larval Trachea    26.725 Larval Carcass    18.75 Adult Head    599.6 Adult Eye    1152.725 Adult Brain    1462 Adult Thoracic-Abdominal Ganglion    1800.6 Adult Crop    3.5 Adult Midgut    3.9 Adult Hindgut    6.3 Adult Malpighian Tubules    4.4 Adult Fat Body no informative data Adult Salivary Gland    7.5 Adult Heart    11.625 Adult VirginFemale Spermatheca    5.5 Adult InseminatedFemale Spermatheca    4.3 Adult Ovary    5.4 Adult Testis    6.6 Adult Male Accessory Gland    7.7 Adult Carcass    40.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body no informative data Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    599.6   NA  Eye    1152.725   NA  Brain    1462   156.6  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    1800.6   NA  Crop    3.5   22.7  Midgut    3.9   7.9  Hindgut    6.3   3.9  Malpighian Tubules    4.4   3.1  Fat Body    no informative data   7.4  Salivary Gland    7.5   NA  Heart    11.625   26.725  Trachea    NA   NA  VirginFemale Spermatheca    5.5   NA  InseminatedFemale Spermatheca    4.3   NA  Ovary    5.4   NA  Testis    6.6   NA  Male Accessory Gland    7.7   18.75  Carcass    40.9 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_24
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034725 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11650-RA;CG6044-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG6044 Stages(s) 11-12 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG6044GD4862 Phenotype manifest in Allele
Classical Alleles ( 4 )
For All Classical Alleles Show
Allele of CG6044 Class Mutagen Stocks Known lesion CG6044A078 1 -- CG6044e00111 piggyBac transposase 1 -- CG6044MI00924 1 -- CG604401D01W-L130 0 --
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG6044 Class Mutagen Stocks Known lesion CG6044GD4862 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG6044JF03025 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG6044KK109635 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(2R)Exel7173 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD4862} NA P{KK109635} NA P{TRiP.JF03025} NA
Insertions
	Type of insertions Name Expression data miscellaneous insertions Mi{MIC}CG6044MI00924 NA P{5'wHy}CG604401D01W-L130 NA P{UASp-YFP.Rab39}13 NA PBac{5HPw+}CG6044A078 NA PBac{RB}CG6044e00111 NA insertion of enhancer trap binary system P{GAL4}barb1 No
Gene Ontology: Function, Process & Cellular Component ( 0 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG6044 allele Gene References
External Data
Linkouts	DroID - A comprehensive database of gene and protein interactions. • FBgn0034725
Orthologs
Genome-wide drosophilid orthologs	Dana\GF11888 Dere\GG22186 Dmoj\GI20558 Dper\GL17541 Dpse\GA19317 Dsec\GM15907 Dsim\GD11665 Dvir\GJ22411 Dyak\GE14180
Curated drosophilid orthologs	Dpse\GA19317
Linkouts	OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0231802 FBgn0209523 FBgn0183405 FBgn0170823 FBgn0079314 FBgn0155144 FBgn0143294 FBgn0114360 FBgn0088928
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	28610 y1 v1; P{TRiP.JF03025}attP2 34125 y1 w*; Mi{MIC}CG6044MI00924 16034 y1 w1118; PBac{5HPw+}CG6044A078
Harvard	- PBac{RB}CG6044e00111
VDRC	v12949 w1118; P{GD4862}v12949 v12951 w1118; P{GD4862}v12951
Genomic Clones ( 2 )
	BACR02I11 BACR48M13 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 32 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	LP01670 RH13652 RH44966
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	GH04036 GH12587 GH22850 RH10415 RH26650 RH64643
Other clones	9829 51633 71210 161656 172690 214217.65 214351.69 214403.62 CK01.72C.E6 EK057451 EK200133 EK265821 EP11062 EP18548 IP04925 IP05025 IP05125 RP004029118 RP004043915 RP004226459 RP004257937 RP004387410 RP004530506
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0034725 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37558
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG6044 BcDNA:RH44966 (FlyBase, 1996-)
Additional comments	Source for merge of CG6044 BcDNA:RH44966 was a shared cDNA (date:030728). (FlyBase, 1996-)
Other Comments
	Identified with: LP01670 <up>FlyBase curator comment: EST found to be chimeric</up>. (Misra, 2001.8.10) LP01670 may be a chimeric clone; its sequence matches both Lcp1 (in 44C--44D) and CG6044 (in 58D). (Misra, 2001.8.10)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_137824 NM_206201 NM_001103946 NM_001169781 RefSeq (Proteins) • NP_611668 NP_995923 NP_001097416 NP_001163252 DDBJ / EMBL / GenBank • AAF46841 AAM29574 AAM68223 AAN71583 AAS64757 ACZ94524 AI258464 AW943979 AY070893 AY113569 BI608932 BI615359 BT001828 CZ478010 Entrez Gene - A searchable database of RefSeq genes. • 37558 UniProtKB/TrEMBL • E1JGS3 Q8IGD8 Q8MLT3 Q9W257
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Immunoglobulin-like (IPR007110) Immunoglobulin-like fold (IPR013783)
Linkouts
	DroID - A comprehensive database of gene and protein interactions. • FBgn0034725 DRSC - Results from RNAi screens. • FBgn0034725 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034725 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11650-RA;CG6044-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0034725 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37558 modMine - Data generated by the modENCODE project. • FBgn0034725 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0231802 FBgn0209523 FBgn0183405 FBgn0170823 FBgn0079314 FBgn0155144 FBgn0143294 FBgn0114360 FBgn0088928
Synonyms & Secondary IDs ( 2 )
Reported As
Symbol Synonym	BcDNA:RH44966   CG6044 (Zhang et al., 2007, Huet et al., 2002, Perkins et al., 2009, Wheeler et al., 2009, Etter et al., 2005, Keleman et al., 2009.8.5)
Name Synonym
Secondary FlyBase IDs
	FBgn0064808
References ( 22 )
Generate a list of	All references relating to this gene ( 22 )
List References by type	Research paper  ( 5 ) Supplementary material  ( 4 ) Personal communication to FlyBase  ( 7 ) FlyBase analysis  ( 3 ) Computer file  ( 3 )
Recent research papers ( 2 )
	Baycin-Hizal et al., 2011, J. Proteome Res. 10(6): 2777--2784 GlycoFly: A Database of Drosophila N-linked Glycoproteins Identified Using SPEG-MS Techniques. [FBrf0213834] Blanco et al., 2010, BMC Dev. Biol. 10: 94 Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812] Show all research papers ...