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Gene Dmel\RpL22-like

General Information
Symbol	Dmel\RpL22-like	Species	D. melanogaster
Name	Ribosomal protein L22-like	Annotation symbol	CG9871
Feature type	protein_coding_gene	FlyBase ID	FBgn0034837
Gene Model Status	Current	Stock availability	None publicly available
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	59D3-59D3	Sequence location	2R:19,134,133..19,135,410 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Ribosomal protein L22-like is referred to in FlyBase by the symbol Dmel\RpL22-like (CG9871, FBgn0034837). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process: translation. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Ribosomal protein L22e. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed during early pupal stages, in adult male stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: larval fat body. Comments on Affy2 ProbeSet: ProbeSet 1630264_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of RpL22-like. Gene sequence location is 2R:19134133..19135410.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2011_10
FB2012_01	Sequence features HFA04582 BKN24012
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 59D3-59D3   Limits computationally determined from genome sequence between P{PZ}l(2)0649606496&P{lacW}l(2)k09913k09913 and P{lacW}l(2)k07136k07136
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\RpL22-like for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.41
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) RpL22-like-RA FBtr0072049  NM_137927   1176   312 RpL22-like-RB FBtr0309870     659   123
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein RpL22-like-PA   FBpp0071958   34.3   312   10.76     NP_611771   AAF46972 RpL22-like-PB   FBpp0301604   12.7   123   10.94
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein L22e (IPR002671)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE013599 AAF46972   AI946695   AY089455   BF490397   BF498933   BP542179   BP544162   BP544857   BP547196   BP547542   BP549453   BP552654   BP554064   BP555470   CK131045   CO184690   CO191237
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8T3X3 Q9W1T1
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0034837    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0034837 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed during early pupal stages, in adult male stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0034837 expression level Developmental Stage   Expression Level embryo 00-02hr    101 embryo 02-04hr    92 embryo 04-06hr    151 embryo 06-08hr    115 embryo 08-10hr    73 embryo 10-12hr    105 embryo 12-14hr    91 embryo 14-16hr    117 embryo 16-18hr    153 embryo 18-20hr    93 embryo 20-22hr    236 embryo 22-24hr    263 larva L1    278 larva L2    325 larva L3 12hr old    606 larva L3 puffstage 1-2    486 larva L3 puffstage 3-6    657 larva L3 puffstage 7-9    790 white prepupae new    801 white prepupae 12hr    1126 white prepupae 24hr    1562 pupae 2d postWPP    1398 pupae 3d postWPP    954 pupae 4d postWPP    655 adult male 01day    1738 adult male 05day    2753 adult male 30day    1784 adult female 01day    72 adult female 05day    85 adult female 30day    23 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  101 embryo 02-04hr    92 embryo 04-06hr  (151) embryo 06-08hr  (115) embryo 08-10hr    73 embryo 10-12hr  105 embryo 12-14hr    91 embryo 14-16hr  (117) embryo 16-18hr  (153) embryo 18-20hr    93 embryo 20-22hr  (236) embryo 22-24hr  (263) larva L1  (278) larva L2  (325) larva L3 12hr old  (606) larva L3 puffstage 1-2  (486) larva L3 puffstage 3-6  (657) larva L3 puffstage 7-9  (790) white prepupae new  (801) white prepupae 12hr  (1126) white prepupae 24hr  (1562) pupae 2d postWPP  (1398) pupae 3d postWPP  (954) pupae 4d postWPP  (655) adult male 01day  (1738) adult male 05day  (2753) adult male 30day  (1784) adult female 01day    72 adult female 05day    85 adult female 30day    23 Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    101 embryo 02-04hr    92 embryo 04-06hr    151 embryo 06-08hr    115 embryo 08-10hr    73 embryo 10-12hr    105 embryo 12-14hr    91 embryo 14-16hr    117 embryo 16-18hr    153 embryo 18-20hr    93 embryo 20-22hr    236 embryo 22-24hr    263 larva L1    278 larva L2    325 larva L3 12hr old    606 larva L3 puffstage 1-2    486 larva L3 puffstage 3-6    657 larva L3 puffstage 7-9    790 white prepupae new    801 white prepupae 12hr    1126 white prepupae 24hr  (1562) pupae 2d postWPP    1398 pupae 3d postWPP    954 pupae 4d postWPP    655 adult male 01day  (1738) adult male 05day  (2753) adult male 30day  (1784) adult female 01day    72 adult female 05day    85 adult female 30day    23 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    101 embryo 02-04hr    92 embryo 04-06hr    151 embryo 06-08hr    115 embryo 08-10hr    73 embryo 10-12hr    105 embryo 12-14hr    91 embryo 14-16hr    117 embryo 16-18hr    153 embryo 18-20hr    93 embryo 20-22hr    236 embryo 22-24hr    263 larva L1    278 larva L2    325 larva L3 12hr old    606 larva L3 puffstage 1-2    486 larva L3 puffstage 3-6    657 larva L3 puffstage 7-9    790 white prepupae new    801 white prepupae 12hr    1126 white prepupae 24hr    1562 pupae 2d postWPP    1398 pupae 3d postWPP    954 pupae 4d postWPP    655 adult male 01day    1738 adult male 05day    2753 adult male 30day    1784 adult female 01day    72 adult female 05day    85 adult female 30day    23 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    101 embryo 02-04hr    92 embryo 04-06hr    151 embryo 06-08hr    115 embryo 08-10hr    73 embryo 10-12hr    105 embryo 12-14hr    91 embryo 14-16hr    117 embryo 16-18hr    153 embryo 18-20hr    93 embryo 20-22hr    236 embryo 22-24hr    263 larva L1    278 larva L2    325 larva L3 12hr old    606 larva L3 puffstage 1-2    486 larva L3 puffstage 3-6    657 larva L3 puffstage 7-9    790 white prepupae new    801 white prepupae 12hr    1126 white prepupae 24hr    1562 pupae 2d postWPP    1398 pupae 3d postWPP    954 pupae 4d postWPP    655 adult male 01day    1738 adult male 05day    2753 adult male 30day    1784 adult female 01day    72 adult female 05day    85 adult female 30day    23 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0034837 expression level Developmental Stage   Expression Level embryo 00-02hr    101 embryo 02-04hr    92 embryo 04-06hr    151 embryo 06-08hr    115 embryo 08-10hr    73 embryo 10-12hr    105 embryo 12-14hr    91 embryo 14-16hr    117 embryo 16-18hr    153 embryo 18-20hr    93 embryo 20-22hr    236 embryo 22-24hr    263 larva L1    278 larva L2    325 larva L3 12hr old    606 larva L3 puffstage 1-2    486 larva L3 puffstage 3-6    657 larva L3 puffstage 7-9    790 white prepupae new    801 white prepupae 12hr    1126 white prepupae 24hr    1562 pupae 2d postWPP    1398 pupae 3d postWPP    954 pupae 4d postWPP    655 adult male 01day    1738 adult male 05day    2753 adult male 30day    1784 adult female 01day    72 adult female 05day    85 adult female 30day    23 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  101 embryo 02-04hr    92 embryo 04-06hr  (151) embryo 06-08hr  115 embryo 08-10hr    73 embryo 10-12hr  105 embryo 12-14hr    91 embryo 14-16hr  117 embryo 16-18hr  (153) embryo 18-20hr    93 embryo 20-22hr  (236) embryo 22-24hr  (263) larva L1  (278) larva L2  (325) larva L3 12hr old  (606) larva L3 puffstage 1-2  (486) larva L3 puffstage 3-6  (657) larva L3 puffstage 7-9  (790) white prepupae new  (801) white prepupae 12hr  (1126) white prepupae 24hr  (1562) pupae 2d postWPP  (1398) pupae 3d postWPP  (954) pupae 4d postWPP  (655) adult male 01day  (1738) adult male 05day  (2753) adult male 30day  (1784) adult female 01day    72 adult female 05day    85 adult female 30day    23 Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    101 embryo 02-04hr    92 embryo 04-06hr    151 embryo 06-08hr    115 embryo 08-10hr    73 embryo 10-12hr    105 embryo 12-14hr    91 embryo 14-16hr    117 embryo 16-18hr    153 embryo 18-20hr    93 embryo 20-22hr    236 embryo 22-24hr    263 larva L1    278 larva L2    325 larva L3 12hr old    606 larva L3 puffstage 1-2    486 larva L3 puffstage 3-6    657 larva L3 puffstage 7-9    790 white prepupae new    801 white prepupae 12hr    1126 white prepupae 24hr  1562 pupae 2d postWPP    1398 pupae 3d postWPP    954 pupae 4d postWPP    655 adult male 01day  1738 adult male 05day  (2753) adult male 30day  1784 adult female 01day    72 adult female 05day    85 adult female 30day    23 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    101 embryo 02-04hr    92 embryo 04-06hr    151 embryo 06-08hr    115 embryo 08-10hr    73 embryo 10-12hr    105 embryo 12-14hr    91 embryo 14-16hr    117 embryo 16-18hr    153 embryo 18-20hr    93 embryo 20-22hr    236 embryo 22-24hr    263 larva L1    278 larva L2    325 larva L3 12hr old    606 larva L3 puffstage 1-2    486 larva L3 puffstage 3-6    657 larva L3 puffstage 7-9    790 white prepupae new    801 white prepupae 12hr    1126 white prepupae 24hr    1562 pupae 2d postWPP    1398 pupae 3d postWPP    954 pupae 4d postWPP    655 adult male 01day    1738 adult male 05day    2753 adult male 30day    1784 adult female 01day    72 adult female 05day    85 adult female 30day    23 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    101 embryo 02-04hr    92 embryo 04-06hr    151 embryo 06-08hr    115 embryo 08-10hr    73 embryo 10-12hr    105 embryo 12-14hr    91 embryo 14-16hr    117 embryo 16-18hr    153 embryo 18-20hr    93 embryo 20-22hr    236 embryo 22-24hr    263 larva L1    278 larva L2    325 larva L3 12hr old    606 larva L3 puffstage 1-2    486 larva L3 puffstage 3-6    657 larva L3 puffstage 7-9    790 white prepupae new    801 white prepupae 12hr    1126 white prepupae 24hr    1562 pupae 2d postWPP    1398 pupae 3d postWPP    954 pupae 4d postWPP    655 adult male 01day    1738 adult male 05day    2753 adult male 30day    1784 adult female 01day    72 adult female 05day    85 adult female 30day    23 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0034837    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0034837 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult testis. Expression at moderate levels in the following post-embryonic organs or tissues: larval fat body. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0034837 expression level Tissue   Expression Level Larval Central Nervous System    3.7 Larval Midgut    3.4 Larval Hindgut    3.6 Larval Malpighian Tubules    8.2 Larval Fat Body    148.2 Larval Salivary Gland    6.2 Larval Trachea    6.625 Larval Carcass    6.6 Adult Head    3 Adult Eye    1.625 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    3.9 Adult Crop    8.1 Adult Midgut    5.2 Adult Hindgut    6 Adult Malpighian Tubules    5.5 Adult Fat Body    9.5 Adult Salivary Gland    1.4 Adult Heart    1.775 Adult VirginFemale Spermatheca    15.1 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    6.1 Adult Testis    533.5 Adult Male Accessory Gland    5.8 Adult Carcass    7.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    3.7 Larval Midgut    3.4 Larval Hindgut    3.6 Larval Malpighian Tubules    8.2 Larval Fat Body    148.2 Larval Salivary Gland    6.2 Larval Trachea    6.625 Larval Carcass    6.6 Adult Head    3 Adult Eye    1.625 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    3.9 Adult Crop    8.1 Adult Midgut    5.2 Adult Hindgut    6 Adult Malpighian Tubules    5.5 Adult Fat Body    9.5 Adult Salivary Gland    1.4 Adult Heart    1.775 Adult VirginFemale Spermatheca    15.1 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    6.1 Adult Testis  533.5 Adult Male Accessory Gland    5.8 Adult Carcass    7.9 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    3.7 Larval Midgut    3.4 Larval Hindgut    3.6 Larval Malpighian Tubules    8.2 Larval Fat Body    148.2 Larval Salivary Gland    6.2 Larval Trachea    6.625 Larval Carcass    6.6 Adult Head    3 Adult Eye    1.625 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    3.9 Adult Crop    8.1 Adult Midgut    5.2 Adult Hindgut    6 Adult Malpighian Tubules    5.5 Adult Fat Body    9.5 Adult Salivary Gland    1.4 Adult Heart    1.775 Adult VirginFemale Spermatheca    15.1 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    6.1 Adult Testis    533.5 Adult Male Accessory Gland    5.8 Adult Carcass    7.9 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    3.7 Larval Midgut    3.4 Larval Hindgut    3.6 Larval Malpighian Tubules    8.2 Larval Fat Body    148.2 Larval Salivary Gland    6.2 Larval Trachea    6.625 Larval Carcass    6.6 Adult Head    3 Adult Eye    1.625 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    3.9 Adult Crop    8.1 Adult Midgut    5.2 Adult Hindgut    6 Adult Malpighian Tubules    5.5 Adult Fat Body    9.5 Adult Salivary Gland    1.4 Adult Heart    1.775 Adult VirginFemale Spermatheca    15.1 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    6.1 Adult Testis    533.5 Adult Male Accessory Gland    5.8 Adult Carcass    7.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0034837 expression level Tissue   Expression Level Larval Central Nervous System    3.7 Larval Midgut    3.4 Larval Hindgut    3.6 Larval Malpighian Tubules    8.2 Larval Fat Body    148.2 Larval Salivary Gland    6.2 Larval Trachea    6.625 Larval Carcass    6.6 Adult Head    3 Adult Eye    1.625 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    3.9 Adult Crop    8.1 Adult Midgut    5.2 Adult Hindgut    6 Adult Malpighian Tubules    5.5 Adult Fat Body    9.5 Adult Salivary Gland    1.4 Adult Heart    1.775 Adult VirginFemale Spermatheca    15.1 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    6.1 Adult Testis    533.5 Adult Male Accessory Gland    5.8 Adult Carcass    7.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    3.7 Larval Midgut    3.4 Larval Hindgut    3.6 Larval Malpighian Tubules    8.2 Larval Fat Body    148.2 Larval Salivary Gland    6.2 Larval Trachea    6.625 Larval Carcass    6.6 Adult Head    3 Adult Eye    1.625 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    3.9 Adult Crop    8.1 Adult Midgut    5.2 Adult Hindgut    6 Adult Malpighian Tubules    5.5 Adult Fat Body    9.5 Adult Salivary Gland    1.4 Adult Heart    1.775 Adult VirginFemale Spermatheca    15.1 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    6.1 Adult Testis  533.5 Adult Male Accessory Gland    5.8 Adult Carcass    7.9 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    3.7 Larval Midgut    3.4 Larval Hindgut    3.6 Larval Malpighian Tubules    8.2 Larval Fat Body    148.2 Larval Salivary Gland    6.2 Larval Trachea    6.625 Larval Carcass    6.6 Adult Head    3 Adult Eye    1.625 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    3.9 Adult Crop    8.1 Adult Midgut    5.2 Adult Hindgut    6 Adult Malpighian Tubules    5.5 Adult Fat Body    9.5 Adult Salivary Gland    1.4 Adult Heart    1.775 Adult VirginFemale Spermatheca    15.1 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    6.1 Adult Testis    533.5 Adult Male Accessory Gland    5.8 Adult Carcass    7.9 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    3.7 Larval Midgut    3.4 Larval Hindgut    3.6 Larval Malpighian Tubules    8.2 Larval Fat Body    148.2 Larval Salivary Gland    6.2 Larval Trachea    6.625 Larval Carcass    6.6 Adult Head    3 Adult Eye    1.625 Adult Brain    3 Adult Thoracic-Abdominal Ganglion    3.9 Adult Crop    8.1 Adult Midgut    5.2 Adult Hindgut    6 Adult Malpighian Tubules    5.5 Adult Fat Body    9.5 Adult Salivary Gland    1.4 Adult Heart    1.775 Adult VirginFemale Spermatheca    15.1 Adult InseminatedFemale Spermatheca no informative data Adult Ovary    6.1 Adult Testis    533.5 Adult Male Accessory Gland    5.8 Adult Carcass    7.9 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca no informative data Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    3   NA  Eye    1.625   NA  Brain    3   3.7  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    3.9   NA  Crop    8.1   3.4  Midgut    5.2   3.6  Hindgut    6   8.2  Malpighian Tubules    5.5   148.2  Fat Body    9.5   6.2  Salivary Gland    1.4   NA  Heart    1.775   6.625  Trachea    NA   NA  VirginFemale Spermatheca    15.1   NA  InseminatedFemale Spermatheca    no informative data   NA  Ovary    6.1   NA  Testis    533.5   NA  Male Accessory Gland    5.8   6.6  Carcass    7.9 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_28
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034837 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9871-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Phenotype manifest in Allele
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of RpL22-like Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 1 )
For All Alleles Carried on Transgenic Constructs Show
Allele of RpL22-like Class Mutagen Stocks Known lesion RpL22-likeGD14708 in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD14708} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 4 unique terms )
Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
ribosome inferred from direct assay (Kearse et al., 2011)
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
structural constituent of ribosome inferred from sequence or structural similarity with human RPL22 (FlyBase, 1992-)
Biological Process
CV term Evidence References
translation inferred from sequence or structural similarity with human RPL22 (FlyBase, 1992-)
Cellular Component
CV term Evidence References
cytosolic large ribosomal subunit inferred from sequence or structural similarity with human RPL22 (FlyBase, 1992-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions RpL22-like allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 63287 DroID - A comprehensive database of gene and protein interactions. • FBgn0034837 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 37684
Orthologs
Genome-wide drosophilid orthologs	Dana\GF13308 Dere\GG20055 Dsec\GM15570 Dsim\GD25071 Dyak\GE11592
Curated drosophilid orthologs
Linkouts	OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV15863 LH16885 ISCW011505 FBgn0234083 FBgn0229392 FBgn0212074 FBgn0201930 FBgn0196383 FBgn0173926 FBgn0170488 JGI_V11_61794 FBgn0080343 FBgn0150668 FBgn0138183 FBgn0015288 FBgn0120079 FBgn0112254 FBgn0105031 FBgn0099218 FBgn0090340 CPIJ004935 BGIBMGA006986 GB10003 AGAP005046 AAEL007771 PB22003 PHUM115910 GLEAN_15654
Stocks & Reagents
Stocks Listed in FlyBase ( 0 )
Genomic Clones ( 2 )
	BACR04G19 BACR34K16 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 14 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	AT26853
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT13350
Other clones	bs29f10 EC28420 EC30502 FGC009H10 FGC024D07 FGC028B08 FGH114D10 FGH118A10 FGM101F01 FGM220A05 FGM227G09 FGM235D12
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0034837 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37684
Antibody Information
	polyclonal (Kearse et al., 2011)
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
	Not a Minute gene. (Marygold et al., 2007) Expression is enriched in embryonic gonads. (Shigenobu et al., 2006)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_137927 RefSeq (Proteins) • NP_611771 DDBJ / EMBL / GenBank • AAF46972 AI946695 BF490397 CK131045 Entrez Gene - A searchable database of RefSeq genes. • 37684 UniProtKB/TrEMBL • Q8T3X3 Q9W1T1
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Ribosomal protein L22e (IPR002671)
Linkouts
	BioGRID - A database of protein and genetic interactions • 63287 DroID - A comprehensive database of gene and protein interactions. • FBgn0034837 DRSC - Results from RNAi screens. • FBgn0034837 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034837 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG9871-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0034837 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37684 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 37684 modMine - Data generated by the modENCODE project. • FBgn0034837 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV15863 LH16885 ISCW011505 FBgn0234083 FBgn0229392 FBgn0212074 FBgn0201930 FBgn0196383 FBgn0173926 FBgn0170488 JGI_V11_61794 FBgn0080343 FBgn0150668 FBgn0138183 FBgn0015288 FBgn0120079 FBgn0112254 FBgn0105031 FBgn0099218 FBgn0090340 CPIJ004935 BGIBMGA006986 GB10003 AGAP005046 AAEL007771 PB22003 PHUM115910 GLEAN_15654
Synonyms & Secondary IDs ( 5 )
Reported As
Symbol Synonym	CG9871 (Shigenobu et al., 2006, Shigenobu et al., 2006, Marygold et al., 2007) RpL22-like (Shigenobu et al., 2006, Shigenobu et al., 2006, Marygold et al., 2007) rpL22-like (Kearse et al., 2011)
Name Synonym	CG9871   Ribosomal protein L22-like   ribosomal protein L22-like (Shigenobu et al., 2006)
Secondary FlyBase IDs
References ( 16 )
Research paper	Kearse et al., 2011, Nucleic Acids Res. 39(7): 2701--2716 Expression of ribosomal protein L22e family members in Drosophila melanogaster: rpL22-like is differentially expressed and alternatively spliced. [FBrf0213492] Marygold et al., 2007, Genome Biol. 8(10): R216 The ribosomal protein genes and Minute loci of Drosophila melanogaster. [FBrf0205398] Shigenobu et al., 2006, Proc. Natl. Acad. Sci. USA 103(37): 13728--13733 Molecular characterization of embryonic gonads by gene expression profiling in Drosophila melanogaster. [FBrf0193273] Shigenobu et al., 2006, Dev., Growth Diffn 48(1): 49--57 Isolation of germline cells from Drosophila embryos by flow cytometry. [FBrf0190265] Kai et al., 2005, Dev. Biol. 283(2): 486--502 The expression profile of purified Drosophila germline stem cells. [FBrf0187387] Zhao et al., 2002, Biochem. biophys. Res. Commun. 298(1): 60--66 Interaction of casein kinase II with ribosomal protein L22 of Drosophila melanogaster. [FBrf0151794]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Dietzl et al., 2007, Nature 448(7150): Supplementary Table 1. [FBrf0202579] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Ashburner and Marygold, 2004.7.2, Ribosomal proteins. Ribosomal proteins. [FBrf0178764] Oliver, 2001.8.16, File from B. Oliver containing information on ESTs expressed in the Drosophila testis, described in Andrews et al., 2000, Genome Res. 10(12): 2030-2043 (FBrf0132348). File from B. Oliver containing information on ESTs expressed in the Drosophila testis, described in Andrews et al., 2000, Genome Res. 10(12): 2030-2043 (FBrf0132348). [FBrf0137492]
FlyBase analysis	FlyBase, 1996-, FlyBase inference based on genome sequence analysis. FlyBase inference based on genome sequence analysis. [FBrf0104946] FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Curated genome annotation	Ashburner, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126651]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]