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Gene Dmel\Dcp1

General Information
Symbol	Dmel\Dcp1	Species	D. melanogaster
Name	Decapping protein 1	Annotation symbol	CG11183
Feature type	protein_coding_gene	FlyBase ID	FBgn0034921
Gene Model Status	Current	Stock availability	6 publicly available
Also Known As	dDcp1, Dcp-1
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	60A8-60A8	Sequence location	2R:19,776,465..19,777,788 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Decapping protein 1 is referred to in FlyBase by the symbol Dmel\Dcp1 (CG11183, FBgn0034921). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: nuclear-transcribed mRNA catabolic process; regulation of cytoplasmic mRNA processing body assembly; pole plasm oskar mRNA localization; gene silencing by miRNA. 16 alleles are reported. The phenotype of these alleles is annotated with: cytoplasmic mRNA processing body. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Dcp1-like decapping. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, during early pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, larval/adult salivary gland, larval trachea, adult ovary, adult male accessory gland. Comments on Affy2 ProbeSet: ProbeSet 1636243_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of Dcp1. Gene sequence location is 2R:19776465..19777788.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
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FB2011_10	Transgenic Constructs P{alphaTub67C-Dcp1.GFP}
FB2012_01	Sequence features BKN21255 HFA04091
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 60A8-60A8   Limits computationally determined from genome sequence between P{lacW}kenk11035&P{EP}CG17658EP730 and P{EP}TalEP489&P{EP}CG3065EP316
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Dcp1 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Dcp1-RA FBtr0072223  NM_137998   1324   372 Dcp1-RB FBtr0301648  NM_001169811   1214   372
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Dcp1-PA   FBpp0072132   41.4   372   7.20     NP_611842   AAF47089 Dcp1-PB   FBpp0290862   41.4   372   7.20     NP_001163282   ACZ94554
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Dcp1-like decapping (IPR010334)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA695849   AA803130   AA942195   AE013599 AAF47089   AE013599 ACZ94554   AI064375   AI387397   AI401968   AI513964   AI514935   AX094039   BF488980   BI164197   BI230489   BI239751   BI352930   BI567974   BI629261   BI630748   BT021964   CO186589   CO277681   CO278334   CO313771   EC065307   EC068842   EC194842   EC206872   EC242599   EV579385   EV587012   EV589836   EV590015   EV591369   EV591385   EV591537   GH739206   GH739224   GH739320   GH739369   GH739417   GH739691   GH739836   GH740776   GH740835   GH741386   GH741541   GH741575   GH742424   GH742828   GH743548   GH743787   GH744671   GH744772   GH745837   GH746146   GH746239   GH746305   GH746445   GH746501   GH746664   GH747361   GH762414   GH762762   GH763032   GH763181   GH764180   GH764899   GH765166   GH766375   GH766687   GH766917   GH767192   GH767492   GH767551   GH767678   GH768739   GH768749   GH769012   GH769520   GH769585
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9W1H5
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0034921    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0034921 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, during early pupal stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0034921 expression level Developmental Stage   Expression Level embryo 00-02hr    3641 embryo 02-04hr    2993 embryo 04-06hr    2831 embryo 06-08hr    2321 embryo 08-10hr    1700 embryo 10-12hr    1755 embryo 12-14hr    800 embryo 14-16hr    1050 embryo 16-18hr    802 embryo 18-20hr    825 embryo 20-22hr    915 embryo 22-24hr    680 larva L1    1280 larva L2    1191 larva L3 12hr old    1059 larva L3 puffstage 1-2    1025 larva L3 puffstage 3-6    1389 larva L3 puffstage 7-9    1593 white prepupae new    1489 white prepupae 12hr    1458 white prepupae 24hr    1505 pupae 2d postWPP    989 pupae 3d postWPP    680 pupae 4d postWPP    725 adult male 01day    909 adult male 05day    1166 adult male 30day    999 adult female 01day    1694 adult female 05day    2304 adult female 30day    2573 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (3641) embryo 02-04hr  (2993) embryo 04-06hr  (2831) embryo 06-08hr  (2321) embryo 08-10hr  (1700) embryo 10-12hr  (1755) embryo 12-14hr  (800) embryo 14-16hr  (1050) embryo 16-18hr  (802) embryo 18-20hr  (825) embryo 20-22hr  (915) embryo 22-24hr  (680) larva L1  (1280) larva L2  (1191) larva L3 12hr old  (1059) larva L3 puffstage 1-2  (1025) larva L3 puffstage 3-6  (1389) larva L3 puffstage 7-9  (1593) white prepupae new  (1489) white prepupae 12hr  (1458) white prepupae 24hr  (1505) pupae 2d postWPP  (989) pupae 3d postWPP  (680) pupae 4d postWPP  (725) adult male 01day  (909) adult male 05day  (1166) adult male 30day  (999) adult female 01day  (1694) adult female 05day  (2304) adult female 30day  (2573) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (3641) embryo 02-04hr  (2993) embryo 04-06hr  (2831) embryo 06-08hr  (2321) embryo 08-10hr  (1700) embryo 10-12hr  (1755) embryo 12-14hr    800 embryo 14-16hr    1050 embryo 16-18hr    802 embryo 18-20hr    825 embryo 20-22hr    915 embryo 22-24hr    680 larva L1    1280 larva L2    1191 larva L3 12hr old    1059 larva L3 puffstage 1-2    1025 larva L3 puffstage 3-6    1389 larva L3 puffstage 7-9  (1593) white prepupae new  1489 white prepupae 12hr  1458 white prepupae 24hr  1505 pupae 2d postWPP    989 pupae 3d postWPP    680 pupae 4d postWPP    725 adult male 01day    909 adult male 05day    1166 adult male 30day    999 adult female 01day  (1694) adult female 05day  (2304) adult female 30day  (2573) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    3641 embryo 02-04hr    2993 embryo 04-06hr    2831 embryo 06-08hr    2321 embryo 08-10hr    1700 embryo 10-12hr    1755 embryo 12-14hr    800 embryo 14-16hr    1050 embryo 16-18hr    802 embryo 18-20hr    825 embryo 20-22hr    915 embryo 22-24hr    680 larva L1    1280 larva L2    1191 larva L3 12hr old    1059 larva L3 puffstage 1-2    1025 larva L3 puffstage 3-6    1389 larva L3 puffstage 7-9    1593 white prepupae new    1489 white prepupae 12hr    1458 white prepupae 24hr    1505 pupae 2d postWPP    989 pupae 3d postWPP    680 pupae 4d postWPP    725 adult male 01day    909 adult male 05day    1166 adult male 30day    999 adult female 01day    1694 adult female 05day    2304 adult female 30day    2573 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    3641 embryo 02-04hr    2993 embryo 04-06hr    2831 embryo 06-08hr    2321 embryo 08-10hr    1700 embryo 10-12hr    1755 embryo 12-14hr    800 embryo 14-16hr    1050 embryo 16-18hr    802 embryo 18-20hr    825 embryo 20-22hr    915 embryo 22-24hr    680 larva L1    1280 larva L2    1191 larva L3 12hr old    1059 larva L3 puffstage 1-2    1025 larva L3 puffstage 3-6    1389 larva L3 puffstage 7-9    1593 white prepupae new    1489 white prepupae 12hr    1458 white prepupae 24hr    1505 pupae 2d postWPP    989 pupae 3d postWPP    680 pupae 4d postWPP    725 adult male 01day    909 adult male 05day    1166 adult male 30day    999 adult female 01day    1694 adult female 05day    2304 adult female 30day    2573 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0034921 expression level Developmental Stage   Expression Level embryo 00-02hr    3641 embryo 02-04hr    2993 embryo 04-06hr    2831 embryo 06-08hr    2321 embryo 08-10hr    1700 embryo 10-12hr    1755 embryo 12-14hr    800 embryo 14-16hr    1050 embryo 16-18hr    802 embryo 18-20hr    825 embryo 20-22hr    915 embryo 22-24hr    680 larva L1    1280 larva L2    1191 larva L3 12hr old    1059 larva L3 puffstage 1-2    1025 larva L3 puffstage 3-6    1389 larva L3 puffstage 7-9    1593 white prepupae new    1489 white prepupae 12hr    1458 white prepupae 24hr    1505 pupae 2d postWPP    989 pupae 3d postWPP    680 pupae 4d postWPP    725 adult male 01day    909 adult male 05day    1166 adult male 30day    999 adult female 01day    1694 adult female 05day    2304 adult female 30day    2573 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr  (3641) embryo 02-04hr  (2993) embryo 04-06hr  (2831) embryo 06-08hr  (2321) embryo 08-10hr  (1700) embryo 10-12hr  (1755) embryo 12-14hr  (800) embryo 14-16hr  (1050) embryo 16-18hr  (802) embryo 18-20hr  (825) embryo 20-22hr  (915) embryo 22-24hr  (680) larva L1  (1280) larva L2  (1191) larva L3 12hr old  (1059) larva L3 puffstage 1-2  (1025) larva L3 puffstage 3-6  (1389) larva L3 puffstage 7-9  (1593) white prepupae new  (1489) white prepupae 12hr  (1458) white prepupae 24hr  (1505) pupae 2d postWPP  (989) pupae 3d postWPP  (680) pupae 4d postWPP  (725) adult male 01day  (909) adult male 05day  (1166) adult male 30day  (999) adult female 01day  (1694) adult female 05day  (2304) adult female 30day  (2573) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (3641) embryo 02-04hr  (2993) embryo 04-06hr  (2831) embryo 06-08hr  2321 embryo 08-10hr  1700 embryo 10-12hr  1755 embryo 12-14hr    800 embryo 14-16hr    1050 embryo 16-18hr    802 embryo 18-20hr    825 embryo 20-22hr    915 embryo 22-24hr    680 larva L1    1280 larva L2    1191 larva L3 12hr old    1059 larva L3 puffstage 1-2    1025 larva L3 puffstage 3-6    1389 larva L3 puffstage 7-9  1593 white prepupae new  1489 white prepupae 12hr  1458 white prepupae 24hr  1505 pupae 2d postWPP    989 pupae 3d postWPP    680 pupae 4d postWPP    725 adult male 01day    909 adult male 05day    1166 adult male 30day    999 adult female 01day  1694 adult female 05day  2304 adult female 30day  (2573) Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    3641 embryo 02-04hr    2993 embryo 04-06hr    2831 embryo 06-08hr    2321 embryo 08-10hr    1700 embryo 10-12hr    1755 embryo 12-14hr    800 embryo 14-16hr    1050 embryo 16-18hr    802 embryo 18-20hr    825 embryo 20-22hr    915 embryo 22-24hr    680 larva L1    1280 larva L2    1191 larva L3 12hr old    1059 larva L3 puffstage 1-2    1025 larva L3 puffstage 3-6    1389 larva L3 puffstage 7-9    1593 white prepupae new    1489 white prepupae 12hr    1458 white prepupae 24hr    1505 pupae 2d postWPP    989 pupae 3d postWPP    680 pupae 4d postWPP    725 adult male 01day    909 adult male 05day    1166 adult male 30day    999 adult female 01day    1694 adult female 05day    2304 adult female 30day    2573 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    3641 embryo 02-04hr    2993 embryo 04-06hr    2831 embryo 06-08hr    2321 embryo 08-10hr    1700 embryo 10-12hr    1755 embryo 12-14hr    800 embryo 14-16hr    1050 embryo 16-18hr    802 embryo 18-20hr    825 embryo 20-22hr    915 embryo 22-24hr    680 larva L1    1280 larva L2    1191 larva L3 12hr old    1059 larva L3 puffstage 1-2    1025 larva L3 puffstage 3-6    1389 larva L3 puffstage 7-9    1593 white prepupae new    1489 white prepupae 12hr    1458 white prepupae 24hr    1505 pupae 2d postWPP    989 pupae 3d postWPP    680 pupae 4d postWPP    725 adult male 01day    909 adult male 05day    1166 adult male 30day    999 adult female 01day    1694 adult female 05day    2304 adult female 30day    2573 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0034921    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0034921 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, larval/adult salivary gland, larval trachea, adult ovary, adult male accessory gland. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0034921 expression level Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0034921 expression level Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    98.1   NA  Eye    97.05   NA  Brain    131.1   219.475  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    108.6   NA  Crop    98.2   88.7  Midgut    84.4   99.6  Hindgut    83.6   90.5  Malpighian Tubules    56.4   70.3  Fat Body    71.4   116.9  Salivary Gland    110.5   NA  Heart    64.7   122.15  Trachea    NA   NA  VirginFemale Spermatheca    55.8   NA  InseminatedFemale Spermatheca    63.3   NA  Ovary    195.4   NA  Testis    42   NA  Male Accessory Gland    190.1   79.425  Carcass    67 modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_06
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034921 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11183-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | embryonic stage | germline clone | maternal effect Dcp1b53 lethal | embryonic stage | maternal effect, with Dcp1b53 Dcp1tT3 lethal | embryonic stage | maternal effect, with Dcp1tT3 Dcp1b53 lethal | pupal stage | recessive Dcp1442P lethal | recessive Dcp1b53 viable, with Scer\GAL4pnr-MD237 Dcp1GD7227 Sterility Allele female sterile | partially, with Dcp1b53 Dcp1tT3 female sterile | partially, with Dcp1tT3 Dcp1b53 Phenotype manifest in Allele cytoplasmic mRNA processing body, with Dcp1442P Dcp1tT2.R57A cytoplasmic mRNA processing body, with Dcp1tT2.R57A Dcp1442P egg chamber | germline clone Dcp1442P embryo | anterior | maternal effect Dcp1b53 embryonic abdominal segment | maternal effect Dcp1b53 embryonic abdominal segment | maternal effect, with Dcp1b53 Dcp1tT3 embryonic abdominal segment | maternal effect, with Dcp1tT3 Dcp1b53 pole cell | maternal effect, with Dcp1b53 Dcp1tT3 pole cell | maternal effect, with Dcp1tT3 Dcp1b53
Classical Alleles ( 5 )
For All Classical Alleles Show
Allele of Dcp1 Class Mutagen Stocks Known lesion Dcp1EY16846 P-element activity 2 -- Dcp1GS11684 1 Yes Dcp1442P 0 Yes Dcp1b53 P-element activity 0 Yes Dcp1SH2322 0 --
Alleles Carried on Transgenic Constructs ( 11 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Dcp1 Class Mutagen Stocks Known lesion Dcp1GD7227 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes Dcp1KK101204 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Dcp1N180.Scer\UAS.P\T.T:Ivir\HA1 in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes Dcp1Scer\UAS.P\T.T:Ivir\HA1 in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes Dcp1T:Avic\GFP-EYFP in vitro construct - coding region fusion 0 Yes Dcp1tT1 in vitro construct - genomic fragment 0 Yes Dcp1tT2.R57A in vitro construct - amino acid replacement 0 Yes Dcp1tT2 in vitro construct - genomic fragment 0 Yes Dcp1tT3 in vitro construct - genomic fragment 0 Yes Dcp1tT4 in vitro construct 0 Yes Dcp1αTub67C.T:Avic\GFP in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(2R)Exel6080 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD7227} NA P{KK101204} NA P{UASp-HA-Dcp1} NA P{UASp-HA-N180-Dcp1} NA characterization construct P{Dcp1.T1} NA P{Dcp1.T2.R57A} NA P{Dcp1.T2} NA P{Dcp1.T3} NA P{Dcp1.T4} NA P{Dcp1.T5} NA P{YFP-Dcp1.L} NA P{αTub67C-Dcp1.GFP} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap P{lacW}Dcp1SH2322 No P{lacW}l(2)SH1489SH1489 No P{lArB}Dcp1b53 No insertion of mobile activating element P{EPgy2}Dcp1EY16846 NA P{GSV6}Dcp1GS11684 NA
Gene Ontology: Function, Process & Cellular Component ( 9 unique terms )
Terms Based on Experimental Evidence ( 9 terms )
Molecular Function
CV term Evidence References
NOT m7G(5')pppN diphosphatase activity inferred from direct assay (Lin et al., 2008)
Biological Process
CV term Evidence References
gene silencing by miRNA inferred from mutant phenotype (Rehwinkel et al., 2005) nuclear-transcribed mRNA catabolic process inferred from mutant phenotype (Lin et al., 2006) NOT nuclear-transcribed mRNA catabolic process, nonsense-mediated decay inferred from mutant phenotype (Rehwinkel et al., 2005) pole plasm oskar mRNA localization inferred from mutant phenotype (Lin et al., 2006) regulation of cytoplasmic mRNA processing body assembly inferred from mutant phenotype (Lin et al., 2008)
Cellular Component
CV term Evidence References
cytoplasm inferred from direct assay (Lin et al., 2008) cytoplasmic mRNA processing body inferred from direct assay (Eulalio et al., 2007, Liu and Gall, 2007) P granule inferred from direct assay (Lin et al., 2006)
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Dcp1 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 63383 DroID - A comprehensive database of gene and protein interactions. • FBgn0034921 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 37790
Orthologs
Genome-wide drosophilid orthologs	Dana\GF12057 Dere\GG19983 Dgri\GH21691 Dmoj\GI18845 Dper\GL10921 Dpse\GA10823 Dsec\GM15497 Dsim\GD25000 Dvir\GJ21878 Dwil\GK15859 Dyak\GE11516
Curated drosophilid orthologs	Dpse\GA10823
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL001187-PA Aedes aegypti (mosquito) AGAP012645-PA Anopheles gambiae (mosquito) XP_391963.3 Apis mellifera (honey bee) XP_001952488.1 Acyrthosiphon pisum (pea aphid) At1g08370.1 Arabidopsis thaliana (wall cress) 97984 Branchiostoma floridae (lancelet) XP_001897767.1 Brugia malayi (roundworm nematode) BGIBMGA014121-PA Bombyx mori (silk worm) ENSBTAP00000003353 Bos taurus (bovine) CN19471 Caenorhabditis brenneri (small nematode) CBP16232 Caenorhabditis briggsae (nematode) CE22543 Caenorhabditis elegans (worm) ENSCAFP00000023554 Canis familiaris (dog) ENSCINP00000025899 Ciona intestinalis (sea squirt) JA17900 Caenorhabditis japonica (nematode) cn10196 Cryptococcus neoformans (yeast-like fungus) CPIJ005592 Culex pipens (mosquito) ENSCPOP00000000063 Cavia porcellus (guinea pig) RP24705 Caenorhabditis remanei (nematode) DDB0187387 Dictyostelium discoideum (amoeba) ENSDARP00000066893 Danio rerio (zebra fish) ENSECAP00000022294 Equus caballus (horse) ENSGACP00000026024 Gymnopilus aculeatus (mushroom) ENSGALP00000008524 Gallus gallus (chicken) ENSP00000280665 Homo sapiens (human) ENSMODP00000022972 Monodelphis domestica (gray opossum) ENSMMUP00000014403 Macaca mulatta (rhesus monkey) ENSMUSP00000108397 Mus musculus (house mouse) XP_001601191.1 Nasonia vitripennis (wasp) ENSORLP00000017547 Oryzias latipes (japanese killifish) LOC_Os07g14580.1 Oryza sativa (asian rice) 35538 Ostreococcus tauri (green alga) PHUM002662-PA Pediculus humanus (human body louse) PP21061 Pristionchus pacificus (nematode) 224697 Physcomitrella patens (moss) ENSPPYP00000004724 Pongo pygmaeus (orangutan) 136630 Phytophthora sojae (root rot pathogen) 825199 Populus trichocarpa (black cottonwood) ENSPTRP00000007740 Pan troglodytes (chimpanzee) ENSRNOP00000021473 Rattus norvegicus (norway rat) 5050778 Sorghum bicolor (sorghum) Smp_165960 Schistosoma mansoni (trematode parasite) XP_001181483.1 Strongylocentrotus purpuratus (purple sea urchin) XP_001198116.1 Strongylocentrotus purpuratus (purple sea urchin) TA10140 Theileria annulata (apicomplexan parasite) XP_971049.1 Tribolium castaneum (red flour beetle) ENSTNIP00000004365 Tetraodon nigroviridis (green spotted pufferfish) TP04_0757 Theileria parva (parasitic protozoan) 4253 Thalassiosira pseudonana (marine diatom) ENSTRUP00000008056 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000001959 Xenopus tropicalis (frog) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV14689 LH10898 FBgn0229318 FBgn0217862 FBgn0208995 FBgn0196313 FBgn0170415 FBgn0168597 JGI_V11_40876 FBgn0070879 FBgn0148531 FBgn0141584 FBgn0129152 FBgn0112183 FBgn0089096 CPIJ005592 BGIBMGA014121 ACYPI009387 GB14691 AGAP012645 AAEL001187 PB20867 PHUM523560 GLEAN_12192
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	17471 y1 w67c23; P{EPgy2}Dcp1EY16846/CyO
Kyoto	203514 y1 w67c23; P{GSV6}Dcp1GS11684/SM1 114473 yd2 w1118 P{ey-FLP.N}2; P{neoFRT}42D P{EPgy2}Dcp1EY16846 /CyO y+
VDRC	v105638 P{KK101204}VIE-260B v31442 w1118; P{GD7227}v31442 v31441 w1118; P{GD7227}v31441/TM3
Genomic Clones ( 1 )
	BACR05F24 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 75 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH04763
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT24662 GH17920 GH26992 GM04592 GM10007 GM21328 LD26267 LD46570 RE03822 RE14177 RE36332 RH39292 RH58104 RH60039
Other clones	107815 CK01.23B.D10 CK01.55C.D3 CK01.103C.A4 Dmel_dig_000845_0641_3773 Dmel_neb_001515_0403_3745 Dmel_neb_004044_0119_3239 Dmel_neb_010123_0381_2015 Dmel_neb_010922_0430_1697 Dmel_neb_012445_0329_3687 Dmel_neb_015314_0332_0563 EK021345 EK125801 EK129803 EK234032 RP001001074 RP001008315 RP001008438 RP001010195 RP001010483 RP001012093 RP001012423 RP001017570 RP001018368 RP001020442 RP001020555 RP001021210 RP001022164 RP001022475 RP001022579 RP001022989 RP001023321 RP001023637 RP001025369 RP001028212 RP001028470 RP001030007 RP001030100 RP001030867 RP001031790 RP001032578 RP001034817 RP001036210 RP001036732 RP001039544 RP001040118 RP001041673 RP001042645 RP001043497 RP001045460 RP001046738 RP001048146 RP001048374 RP001049323 RP001049412 RP001050219 RP001051013 RP001053284 RP001053743 RP001055296
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0034921 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37790
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Dcp1 CG11183 (Lin, 2006.2.28)
Source for database merge of	Source for merge of: CG11183 anon-WO0118547.163 (FlyBase, 1996-)
Additional comments	Source for merge of CG11183 anon-WO0118547.163 was sequence comparison (date:051113). (FlyBase, 1996-)
Other Comments
	dsRNA made from templates generated with primers directed against this gene is transfected into S2 cells to study the genes role in decapping. (Behm-Ansmant et al., 2006) Dcp1 is required for degradation of osk, bcd and twe mRNAs during embryogenesis. (Lin et al., 2006) Dcp1 is required for the posterior localization of osk mRNA in the oocyte. (Lin et al., 2006) dsRNA has been made from templates generated with primers directed against this gene. (Rehwinkel et al., 2005) In contrast to the decapping enzymes in yeast and humans, the Dcp1 product does not seem to participate in the nonsense-mediated decay pathway. (Rehwinkel et al., 2005) Area matching Drosophila EST AI0643375. (Davies, 2001.3.15)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_137998 NM_001169811 RefSeq (Proteins) • NP_611842 NP_001163282 DDBJ / EMBL / GenBank • AAF47089 ACZ94554 AI064375 AI401968 AX094039 Entrez Gene - A searchable database of RefSeq genes. • 37790 UniProtKB/TrEMBL • Q9W1H5
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Dcp1-like decapping (IPR010334)
Linkouts
	BioGRID - A database of protein and genetic interactions • 63383 DroID - A comprehensive database of gene and protein interactions. • FBgn0034921 DRSC - Results from RNAi screens. • FBgn0034921 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034921 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11183-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0034921 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37790 InParanoid A subset of ortholog calls from InParanoid. • AAEL001187-PA Aedes aegypti (mosquito) AGAP012645-PA Anopheles gambiae (mosquito) XP_391963.3 Apis mellifera (honey bee) XP_001952488.1 Acyrthosiphon pisum (pea aphid) At1g08370.1 Arabidopsis thaliana (wall cress) 97984 Branchiostoma floridae (lancelet) XP_001897767.1 Brugia malayi (roundworm nematode) BGIBMGA014121-PA Bombyx mori (silk worm) ENSBTAP00000003353 Bos taurus (bovine) CN19471 Caenorhabditis brenneri (small nematode) CBP16232 Caenorhabditis briggsae (nematode) CE22543 Caenorhabditis elegans (worm) ENSCAFP00000023554 Canis familiaris (dog) ENSCINP00000025899 Ciona intestinalis (sea squirt) JA17900 Caenorhabditis japonica (nematode) cn10196 Cryptococcus neoformans (yeast-like fungus) CPIJ005592 Culex pipens (mosquito) ENSCPOP00000000063 Cavia porcellus (guinea pig) RP24705 Caenorhabditis remanei (nematode) DDB0187387 Dictyostelium discoideum (amoeba) ENSDARP00000066893 Danio rerio (zebra fish) ENSECAP00000022294 Equus caballus (horse) ENSGACP00000026024 Gymnopilus aculeatus (mushroom) ENSGALP00000008524 Gallus gallus (chicken) ENSP00000280665 Homo sapiens (human) ENSMODP00000022972 Monodelphis domestica (gray opossum) ENSMMUP00000014403 Macaca mulatta (rhesus monkey) ENSMUSP00000108397 Mus musculus (house mouse) XP_001601191.1 Nasonia vitripennis (wasp) ENSORLP00000017547 Oryzias latipes (japanese killifish) LOC_Os07g14580.1 Oryza sativa (asian rice) 35538 Ostreococcus tauri (green alga) PHUM002662-PA Pediculus humanus (human body louse) PP21061 Pristionchus pacificus (nematode) 224697 Physcomitrella patens (moss) ENSPPYP00000004724 Pongo pygmaeus (orangutan) 136630 Phytophthora sojae (root rot pathogen) 825199 Populus trichocarpa (black cottonwood) ENSPTRP00000007740 Pan troglodytes (chimpanzee) ENSRNOP00000021473 Rattus norvegicus (norway rat) 5050778 Sorghum bicolor (sorghum) Smp_165960 Schistosoma mansoni (trematode parasite) XP_001181483.1 Strongylocentrotus purpuratus (purple sea urchin) XP_001198116.1 Strongylocentrotus purpuratus (purple sea urchin) TA10140 Theileria annulata (apicomplexan parasite) XP_971049.1 Tribolium castaneum (red flour beetle) ENSTNIP00000004365 Tetraodon nigroviridis (green spotted pufferfish) TP04_0757 Theileria parva (parasitic protozoan) 4253 Thalassiosira pseudonana (marine diatom) ENSTRUP00000008056 Takifugu rubripes (pufferfish Takifugu) ENSXETP00000001959 Xenopus tropicalis (frog) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 37790 modMine - Data generated by the modENCODE project. • FBgn0034921 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • NV14689 LH10898 FBgn0229318 FBgn0217862 FBgn0208995 FBgn0196313 FBgn0170415 FBgn0168597 JGI_V11_40876 FBgn0070879 FBgn0148531 FBgn0141584 FBgn0129152 FBgn0112183 FBgn0089096 CPIJ005592 BGIBMGA014121 ACYPI009387 GB14691 AGAP012645 AAEL001187 PB20867 PHUM523560 GLEAN_12192
Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym	anon-WO0118547.163   CG11183 (Giot et al., 2003, Lin et al., 2006, Keleman et al., 2009.8.5, Jäger and Dorner, 2010) Dcp1 (Zaessinger et al., 2006, Barbee et al., 2006, Lin et al., 2008, Lauwers et al., 2009, Snee and Macdonald, 2009, Liu and Gall, 2007, Olivieri et al., 2010) DCP1 (Rehwinkel et al., 2005, Tritschler et al., 2007, Eulalio et al., 2007, Jinek et al., 2008, Eulalio et al., 2007, Lee et al., 2009, Tritschler et al., 2008, Behm-Ansmant et al., 2006, Farny et al., 2009, Haas et al., 2010, Jäger and Dorner, 2010, Beerman and Jongens, 2011) Dcp-1 (Navarro et al., 2009, Ditzel et al., 2008) Dcp1p (Valencia-Sanchez et al., 2006) dDcp1 (Lin, 2006.2.28, Lin et al., 2006, Lin et al., 2004, Seydoux and Braun, 2006, Lin et al., 2006, Lin et al., 2008, Zabolotskaya et al., 2008, Reich et al., 2009, Lin et al., 2008) dDCP1 (Lim et al., 2009)
Name Synonym	Decapping protein 1 (Lin et al., 2006, Lin et al., 2006, Lin et al., 2008)
Secondary FlyBase IDs
	FBgn0062201
References ( 47 )
Generate a list of	All references relating to this gene ( 47 )
List References by type	Research paper  ( 26 ) Supplementary material  ( 5 ) Review  ( 2 ) Personal communication to FlyBase  ( 6 ) Abstract  ( 2 ) FlyBase analysis  ( 3 ) Patent  ( 1 ) DNA/RNA sequence record  ( 1 ) Computer file  ( 1 )
Recent research papers ( 5 )
	Beerman and Jongens, 2011, Neuroscience 181: 48--66 A non-canonical start codon in the Drosophila fragile X gene yields two functional isoforms. [FBrf0213401] Blanco et al., 2010, BMC Dev. Biol. 10: 94 Gene expression following induction of regeneration in Drosophila wing imaginal discs. Expression profile of regenerating wing discs. [FBrf0211812] Haas et al., 2010, J. Cell Biol. 189(2): 289--302 HPat provides a link between deadenylation and decapping in metazoa. [FBrf0210604] Jäger and Dorner, 2010, RNA Biol. 7(3): 381--385 The decapping activator HPat a novel factor co-purifying with GW182 from Drosophila cells. [FBrf0212181] Olivieri et al., 2010, EMBO J. 29(19): 3301--3317 An in vivo RNAi assay identifies major genetic and cellular requirements for primary piRNA biogenesis in Drosophila. [FBrf0212004] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2010 Show reviews ...