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Gene Dmel\Dcp1

General Information
Symbol	Dmel\Dcp1	Species	D. melanogaster
Name	Decapping protein 1	Annotation symbol	CG11183
Feature type	protein_coding_gene	FlyBase ID	FBgn0034921
Gene Model Status	Current	Stock availability	6 publicly available
Also Known As	dDcp1, Dcp-1
Genomic Location
Chromosome (arm)	2R	Recombination map
Cytogenetic map	60A8-60A8	Sequence location	2R:19,776,465..19,777,788 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	The gene Decapping protein 1 is referred to in FlyBase by the symbol Dmel\Dcp1 (CG11183, FBgn0034921). It is a protein_coding_gene from Drosophila melanogaster. There is experimental evidence that it has the molecular function: protein binding. There is experimental evidence that it is involved in the biological process: nuclear-transcribed mRNA catabolic process; positive regulation of gene silencing by miRNA; regulation of cytoplasmic mRNA processing body assembly; pole plasm oskar mRNA localization; gene silencing by miRNA. 17 alleles are reported. The phenotype of these alleles is annotated with: cytoplasmic mRNA processing body. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Dcp1-like decapping; Pleckstrin homology-like domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, during early pupal stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, larval/adult salivary gland, larval trachea, adult ovary, adult male accessory gland. Comments on Affy2 ProbeSet: ProbeSet 1636243_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of Dcp1. Gene sequence location is 2R:19776465..19777788.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 60A8-60A8   Limits computationally determined from genome sequence between P{lacW}kenk11035&P{EP}CG17658EP730 and P{EP}TalEP489&P{EP}CG3065EP316
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\Dcp1 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) Dcp1-RA FBtr0072223  NM_137998   1324   372 Dcp1-RB FBtr0301648  NM_001169811   1214   372
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein Dcp1-PA   FBpp0072132   41.4   372   7.20     NP_611842   AAF47089 Dcp1-PB   FBpp0290862   41.4   372   7.20     NP_001163282   ACZ94554
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Dcp1-like decapping (IPR010334) Pleckstrin homology-like domain (IPR011993)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA695849   AA803130   AA942195   AE013599 AAF47089   AE013599 ACZ94554   AI064375   AI387397   AI401968   AI513964   AI514935   AX094039   BF488980   BI164197   BI230489   BI239751   BI352930   BI567974   BI629261   BI630748   BT021964   CO186589   CO277681   CO278334   CO313771   EC065307   EC068842   EC194842   EC206872   EC242599   EV579385   EV587012   EV589836   EV590015   EV591369   EV591385   EV591537   GH739206   GH739224   GH739320   GH739369   GH739417   GH739691   GH739836   GH740776   GH740835   GH741386   GH741541   GH741575   GH742424   GH742828   GH743548   GH743787   GH744671   GH744772   GH745837   GH746146   GH746239   GH746305   GH746445   GH746501   GH746664   GH747361   GH762414   GH762762   GH763032   GH763181   GH764180   GH764899   GH765166   GH766375   GH766687   GH766917   GH767192   GH767492   GH767551   GH767678   GH768739   GH768749   GH769012   GH769520   GH769585
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q9W1H5
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
cytoplasm inferred from direct assay (Lin et al., 2008) cytoplasmic mRNA processing body inferred from direct assay (Eulalio et al., 2007, Liu and Gall, 2007, Fan et al., 2011) P granule inferred from direct assay (Lin et al., 2006)
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at moderate levels in the following post-embryonic organs or tissues: larval/adult central nervous system, larval/adult salivary gland, larval trachea, adult ovary, adult male accessory gland. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    219.475 Larval Midgut    88.7 Larval Hindgut    99.6 Larval Malpighian Tubules    90.5 Larval Fat Body    70.3 Larval Salivary Gland    116.9 Larval Trachea    122.15 Larval Carcass    79.425 Adult Head    98.1 Adult Eye    97.05 Adult Brain    131.1 Adult Thoracic-Abdominal Ganglion    108.6 Adult Crop    98.2 Adult Midgut    84.4 Adult Hindgut    83.6 Adult Malpighian Tubules    56.4 Adult Fat Body    71.4 Adult Salivary Gland    110.5 Adult Heart    64.7 Adult VirginFemale Spermatheca    55.8 Adult InseminatedFemale Spermatheca    63.3 Adult Ovary    195.4 Adult Testis    42 Adult Male Accessory Gland    190.1 Adult Carcass    67 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    98.1   NA  Eye    97.05   NA  Brain    131.1   219.475  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    108.6   NA  Crop    98.2   88.7  Midgut    84.4   99.6  Hindgut    83.6   90.5  Malpighian Tubules    56.4   70.3  Fat Body    71.4   116.9  Salivary Gland    110.5   NA  Heart    64.7   122.15  Trachea    NA   NA  VirginFemale Spermatheca    55.8   NA  InseminatedFemale Spermatheca    63.3   NA  Ovary    195.4   NA  Testis    42   NA  Male Accessory Gland    190.1   79.425  Carcass    67 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    19 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    7 head, mated 1-day female    5 head, mated 4-day female    4 head, mated 20-day female    7 head, mated 1-day male    9 head, mated 4-day male    7 head, mated 20-day male    10 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    5 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    8 digestive system, 4-day adult    6 digestive system, 20-day adult    6 fat body, larvae L3 wandering    3 fat body, white prepupae    7 fat body, pupae P8    7 carcass, larvae L3 wandering    14 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    7 ovary, virgin 4-day female    26 ovary, mated 4-day female    20 testis, mated 4-day male    16 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  (29) central nervous system, larvae L3    19 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    7 head, mated 1-day female    5 head, mated 4-day female    4 head, mated 20-day female    7 head, mated 1-day male    9 head, mated 4-day male    7 head, mated 20-day male    10 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    5 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    8 digestive system, 4-day adult    6 digestive system, 20-day adult    6 fat body, larvae L3 wandering    3 fat body, white prepupae    7 fat body, pupae P8    7 carcass, larvae L3 wandering    14 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    7 ovary, virgin 4-day female  26 ovary, mated 4-day female    20 testis, mated 4-day male    16 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    19 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    7 head, mated 1-day female    5 head, mated 4-day female    4 head, mated 20-day female    7 head, mated 1-day male    9 head, mated 4-day male    7 head, mated 20-day male    10 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    5 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    8 digestive system, 4-day adult    6 digestive system, 20-day adult    6 fat body, larvae L3 wandering    3 fat body, white prepupae    7 fat body, pupae P8    7 carcass, larvae L3 wandering    14 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    7 ovary, virgin 4-day female    26 ovary, mated 4-day female    20 testis, mated 4-day male    16 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    19 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    7 head, mated 1-day female    5 head, mated 4-day female    4 head, mated 20-day female    7 head, mated 1-day male    9 head, mated 4-day male    7 head, mated 20-day male    10 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    5 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    8 digestive system, 4-day adult    6 digestive system, 20-day adult    6 fat body, larvae L3 wandering    3 fat body, white prepupae    7 fat body, pupae P8    7 carcass, larvae L3 wandering    14 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    7 ovary, virgin 4-day female    26 ovary, mated 4-day female    20 testis, mated 4-day male    16 accessory gland, mated 4-day male    12 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    19 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    7 head, mated 1-day female    5 head, mated 4-day female    4 head, mated 20-day female    7 head, mated 1-day male    9 head, mated 4-day male    7 head, mated 20-day male    10 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    5 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    8 digestive system, 4-day adult    6 digestive system, 20-day adult    6 fat body, larvae L3 wandering    3 fat body, white prepupae    7 fat body, pupae P8    7 carcass, larvae L3 wandering    14 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    7 ovary, virgin 4-day female    26 ovary, mated 4-day female    20 testis, mated 4-day male    16 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering  29 central nervous system, larvae L3    19 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    7 head, mated 1-day female    5 head, mated 4-day female    4 head, mated 20-day female    7 head, mated 1-day male    9 head, mated 4-day male    7 head, mated 20-day male    10 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    5 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    8 digestive system, 4-day adult    6 digestive system, 20-day adult    6 fat body, larvae L3 wandering    3 fat body, white prepupae    7 fat body, pupae P8    7 carcass, larvae L3 wandering    14 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    7 ovary, virgin 4-day female  26 ovary, mated 4-day female    20 testis, mated 4-day male    16 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    19 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    7 head, mated 1-day female    5 head, mated 4-day female    4 head, mated 20-day female    7 head, mated 1-day male    9 head, mated 4-day male    7 head, mated 20-day male    10 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    5 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    8 digestive system, 4-day adult    6 digestive system, 20-day adult    6 fat body, larvae L3 wandering    3 fat body, white prepupae    7 fat body, pupae P8    7 carcass, larvae L3 wandering    14 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    7 ovary, virgin 4-day female    26 ovary, mated 4-day female    20 testis, mated 4-day male    16 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    29 central nervous system, larvae L3    19 central nervous system, pupae P8    7 head, virgin 1-day female    6 head, virgin 4-day female    6 head, virgin 20-day female    7 head, mated 1-day female    5 head, mated 4-day female    4 head, mated 20-day female    7 head, mated 1-day male    9 head, mated 4-day male    7 head, mated 20-day male    10 salivary gland, larvae L3 wandering    2 salivary gland, white prepupae    5 digestive system, larvae L3 wandering    12 digestive system, 1-day adult    8 digestive system, 4-day adult    6 digestive system, 20-day adult    6 fat body, larvae L3 wandering    3 fat body, white prepupae    7 fat body, pupae P8    7 carcass, larvae L3 wandering    14 carcass, 1-day adult    4 carcass, 4-day adult    6 carcass, 20-day adult    7 ovary, virgin 4-day female    26 ovary, mated 4-day female    20 testis, mated 4-day male    16 accessory gland, mated 4-day male    12 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages, during late larval stages, during early pupal stages, in adult female stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    48 embryo 02-04hr    39 embryo 04-06hr    37 embryo 06-08hr    31 embryo 08-10hr    22 embryo 10-12hr    23 embryo 12-14hr    11 embryo 14-16hr    14 embryo 16-18hr    11 embryo 18-20hr    11 embryo 20-22hr    12 embryo 22-24hr    9 larva L1    17 larva L2    16 larva L3 12hr old    14 larva L3 puffstage 1-2    13 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    19 white prepupae 24hr    20 pupae 2d postWPP    13 pupae 3d postWPP    9 pupae 4d postWPP    10 adult male 01day    12 adult male 05day    15 adult male 30day    13 adult female 01day    22 adult female 05day    30 adult female 30day    34 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (48) embryo 02-04hr  (39) embryo 04-06hr  (37) embryo 06-08hr  (31) embryo 08-10hr    22 embryo 10-12hr    23 embryo 12-14hr    11 embryo 14-16hr    14 embryo 16-18hr    11 embryo 18-20hr    11 embryo 20-22hr    12 embryo 22-24hr    9 larva L1    17 larva L2    16 larva L3 12hr old    14 larva L3 puffstage 1-2    13 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    19 white prepupae 24hr    20 pupae 2d postWPP    13 pupae 3d postWPP    9 pupae 4d postWPP    10 adult male 01day    12 adult male 05day    15 adult male 30day    13 adult female 01day    22 adult female 05day  (30) adult female 30day  (34) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    48 embryo 02-04hr    39 embryo 04-06hr    37 embryo 06-08hr    31 embryo 08-10hr    22 embryo 10-12hr    23 embryo 12-14hr    11 embryo 14-16hr    14 embryo 16-18hr    11 embryo 18-20hr    11 embryo 20-22hr    12 embryo 22-24hr    9 larva L1    17 larva L2    16 larva L3 12hr old    14 larva L3 puffstage 1-2    13 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    19 white prepupae 24hr    20 pupae 2d postWPP    13 pupae 3d postWPP    9 pupae 4d postWPP    10 adult male 01day    12 adult male 05day    15 adult male 30day    13 adult female 01day    22 adult female 05day    30 adult female 30day    34 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    48 embryo 02-04hr    39 embryo 04-06hr    37 embryo 06-08hr    31 embryo 08-10hr    22 embryo 10-12hr    23 embryo 12-14hr    11 embryo 14-16hr    14 embryo 16-18hr    11 embryo 18-20hr    11 embryo 20-22hr    12 embryo 22-24hr    9 larva L1    17 larva L2    16 larva L3 12hr old    14 larva L3 puffstage 1-2    13 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    19 white prepupae 24hr    20 pupae 2d postWPP    13 pupae 3d postWPP    9 pupae 4d postWPP    10 adult male 01day    12 adult male 05day    15 adult male 30day    13 adult female 01day    22 adult female 05day    30 adult female 30day    34 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    48 embryo 02-04hr    39 embryo 04-06hr    37 embryo 06-08hr    31 embryo 08-10hr    22 embryo 10-12hr    23 embryo 12-14hr    11 embryo 14-16hr    14 embryo 16-18hr    11 embryo 18-20hr    11 embryo 20-22hr    12 embryo 22-24hr    9 larva L1    17 larva L2    16 larva L3 12hr old    14 larva L3 puffstage 1-2    13 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    19 white prepupae 24hr    20 pupae 2d postWPP    13 pupae 3d postWPP    9 pupae 4d postWPP    10 adult male 01day    12 adult male 05day    15 adult male 30day    13 adult female 01day    22 adult female 05day    30 adult female 30day    34 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (48) embryo 02-04hr  (39) embryo 04-06hr  (37) embryo 06-08hr  31 embryo 08-10hr    22 embryo 10-12hr    23 embryo 12-14hr    11 embryo 14-16hr    14 embryo 16-18hr    11 embryo 18-20hr    11 embryo 20-22hr    12 embryo 22-24hr    9 larva L1    17 larva L2    16 larva L3 12hr old    14 larva L3 puffstage 1-2    13 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    19 white prepupae 24hr    20 pupae 2d postWPP    13 pupae 3d postWPP    9 pupae 4d postWPP    10 adult male 01day    12 adult male 05day    15 adult male 30day    13 adult female 01day    22 adult female 05day  30 adult female 30day  (34) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    48 embryo 02-04hr    39 embryo 04-06hr    37 embryo 06-08hr    31 embryo 08-10hr    22 embryo 10-12hr    23 embryo 12-14hr    11 embryo 14-16hr    14 embryo 16-18hr    11 embryo 18-20hr    11 embryo 20-22hr    12 embryo 22-24hr    9 larva L1    17 larva L2    16 larva L3 12hr old    14 larva L3 puffstage 1-2    13 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    19 white prepupae 24hr    20 pupae 2d postWPP    13 pupae 3d postWPP    9 pupae 4d postWPP    10 adult male 01day    12 adult male 05day    15 adult male 30day    13 adult female 01day    22 adult female 05day    30 adult female 30day    34 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    48 embryo 02-04hr    39 embryo 04-06hr    37 embryo 06-08hr    31 embryo 08-10hr    22 embryo 10-12hr    23 embryo 12-14hr    11 embryo 14-16hr    14 embryo 16-18hr    11 embryo 18-20hr    11 embryo 20-22hr    12 embryo 22-24hr    9 larva L1    17 larva L2    16 larva L3 12hr old    14 larva L3 puffstage 1-2    13 larva L3 puffstage 3-6    18 larva L3 puffstage 7-9    21 white prepupae new    20 white prepupae 12hr    19 white prepupae 24hr    20 pupae 2d postWPP    13 pupae 3d postWPP    9 pupae 4d postWPP    10 adult male 01day    12 adult male 05day    15 adult male 30day    13 adult female 01day    22 adult female 05day    30 adult female 30day    34 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    24 embryonic 1182-4H    19 embryonic GM2    13 embryonic Kc167    15 embryonic S1    45 embryonic S3    15 leg disc CME L1    25 wing disc CME-W2    12 wing disc ML-DmD8    14 wing disc ML-DmD9    21 wing disc ML-DmD16-c3    21 wing disc ML-DmD21    38 wing disc ML-DmD32    18 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    25 antennal disc ML-DmD20-c5    30 mixed discs ML-DmD4-c1    19 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    7 ovary fGS/OSS    33 ovary OSC    17 ovary OSS    10 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  26 Schneider line 2 Sg4    24 embryonic 1182-4H    19 embryonic GM2    13 embryonic Kc167    15 embryonic S1  (45) embryonic S3    15 leg disc CME L1    25 wing disc CME-W2    12 wing disc ML-DmD8    14 wing disc ML-DmD9    21 wing disc ML-DmD16-c3    21 wing disc ML-DmD21  (38) wing disc ML-DmD32    18 haltere disc ML-DmD17-c3  (41) eye-antennal disc ML-DmD11    25 antennal disc ML-DmD20-c5  (30) mixed discs ML-DmD4-c1    19 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    7 ovary fGS/OSS  (33) ovary OSC    17 ovary OSS    10 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    24 embryonic 1182-4H    19 embryonic GM2    13 embryonic Kc167    15 embryonic S1    45 embryonic S3    15 leg disc CME L1    25 wing disc CME-W2    12 wing disc ML-DmD8    14 wing disc ML-DmD9    21 wing disc ML-DmD16-c3    21 wing disc ML-DmD21    38 wing disc ML-DmD32    18 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    25 antennal disc ML-DmD20-c5    30 mixed discs ML-DmD4-c1    19 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    7 ovary fGS/OSS    33 ovary OSC    17 ovary OSS    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    24 embryonic 1182-4H    19 embryonic GM2    13 embryonic Kc167    15 embryonic S1    45 embryonic S3    15 leg disc CME L1    25 wing disc CME-W2    12 wing disc ML-DmD8    14 wing disc ML-DmD9    21 wing disc ML-DmD16-c3    21 wing disc ML-DmD21    38 wing disc ML-DmD32    18 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    25 antennal disc ML-DmD20-c5    30 mixed discs ML-DmD4-c1    19 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    7 ovary fGS/OSS    33 ovary OSC    17 ovary OSS    10 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    24 embryonic 1182-4H    19 embryonic GM2    13 embryonic Kc167    15 embryonic S1    45 embryonic S3    15 leg disc CME L1    25 wing disc CME-W2    12 wing disc ML-DmD8    14 wing disc ML-DmD9    21 wing disc ML-DmD16-c3    21 wing disc ML-DmD21    38 wing disc ML-DmD32    18 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    25 antennal disc ML-DmD20-c5    30 mixed discs ML-DmD4-c1    19 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    7 ovary fGS/OSS    33 ovary OSC    17 ovary OSS    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  26 Schneider line 2 Sg4    24 embryonic 1182-4H    19 embryonic GM2    13 embryonic Kc167    15 embryonic S1  (45) embryonic S3    15 leg disc CME L1    25 wing disc CME-W2    12 wing disc ML-DmD8    14 wing disc ML-DmD9    21 wing disc ML-DmD16-c3    21 wing disc ML-DmD21  (38) wing disc ML-DmD32    18 haltere disc ML-DmD17-c3  (41) eye-antennal disc ML-DmD11    25 antennal disc ML-DmD20-c5  30 mixed discs ML-DmD4-c1    19 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    7 ovary fGS/OSS  (33) ovary OSC    17 ovary OSS    10 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    24 embryonic 1182-4H    19 embryonic GM2    13 embryonic Kc167    15 embryonic S1    45 embryonic S3    15 leg disc CME L1    25 wing disc CME-W2    12 wing disc ML-DmD8    14 wing disc ML-DmD9    21 wing disc ML-DmD16-c3    21 wing disc ML-DmD21    38 wing disc ML-DmD32    18 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    25 antennal disc ML-DmD20-c5    30 mixed discs ML-DmD4-c1    19 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    7 ovary fGS/OSS    33 ovary OSC    17 ovary OSS    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    26 Schneider line 2 Sg4    24 embryonic 1182-4H    19 embryonic GM2    13 embryonic Kc167    15 embryonic S1    45 embryonic S3    15 leg disc CME L1    25 wing disc CME-W2    12 wing disc ML-DmD8    14 wing disc ML-DmD9    21 wing disc ML-DmD16-c3    21 wing disc ML-DmD21    38 wing disc ML-DmD32    18 haltere disc ML-DmD17-c3    41 eye-antennal disc ML-DmD11    25 antennal disc ML-DmD20-c5    30 mixed discs ML-DmD4-c1    19 CNS ML-DmBG1-c1    22 CNS ML-DmBG2-c2    15 tumorous blood cells mbn2    7 ovary fGS/OSS    33 ovary OSC    17 ovary OSS    10 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    11 cold shock, 4-day adult    6 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    6 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    17 Ethanol 5% 3 hrs, larvae L3    7 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    7 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    12 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    12 Paraquat 10 mM 48 hrs, 4-day adult    15 Rotenone 2 μg 12 hrs, larvae L3    12 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    11 cold shock, 4-day adult    6 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    6 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    17 Ethanol 5% 3 hrs, larvae L3    7 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    7 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    12 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    12 Paraquat 10 mM 48 hrs, 4-day adult    15 Rotenone 2 μg 12 hrs, larvae L3    12 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    11 cold shock, 4-day adult    6 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    6 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    17 Ethanol 5% 3 hrs, larvae L3    7 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    7 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    12 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    12 Paraquat 10 mM 48 hrs, 4-day adult    15 Rotenone 2 μg 12 hrs, larvae L3    12 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    11 cold shock, 4-day adult    6 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    6 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    17 Ethanol 5% 3 hrs, larvae L3    7 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    7 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    12 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    12 Paraquat 10 mM 48 hrs, 4-day adult    15 Rotenone 2 μg 12 hrs, larvae L3    12 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    11 cold shock, 4-day adult    6 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    6 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    17 Ethanol 5% 3 hrs, larvae L3    7 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    7 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    12 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    12 Paraquat 10 mM 48 hrs, 4-day adult    15 Rotenone 2 μg 12 hrs, larvae L3    12 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    11 cold shock, 4-day adult    6 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    6 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    17 Ethanol 5% 3 hrs, larvae L3    7 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    7 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    12 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    12 Paraquat 10 mM 48 hrs, 4-day adult    15 Rotenone 2 μg 12 hrs, larvae L3    12 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    11 cold shock, 4-day adult    6 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    6 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    17 Ethanol 5% 3 hrs, larvae L3    7 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    7 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    12 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    12 Paraquat 10 mM 48 hrs, 4-day adult    15 Rotenone 2 μg 12 hrs, larvae L3    12 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    11 cold shock, 4-day adult    6 heat shock, 4-day adult    11 Cadmium 50 mM 6 hrs, larvae L3    14 Cadmium 50 mM 12 hrs, larvae L3    10 Cadmium 50 mM 48 hrs, 4-day adult    10 Cadmium 100 mM 48 hrs, 4-day adult    12 Copper 0.5 mM 12 hrs, larvae L3    6 Copper 15 mM 48 hrs, 4-day adult    6 Zinc 5 mM 12 hrs, larvae L3    7 Zinc 4.5 mM 48 hrs, 4-day adult    5 Ethanol 2.5% 3 hrs, larvae L3    17 Ethanol 5% 3 hrs, larvae L3    7 Ethanol 10% 3 hrs, larvae L3    9 Caffeine 1.5 mg/ml 4 hrs, larvae L3    7 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    12 Caffeine 25 mg/ml 48 hrs, 4-day adult    7 Paraquat 5 mM 48 hrs, 4-day adult    12 Paraquat 10 mM 48 hrs, 4-day adult    15 Rotenone 2 μg 12 hrs, larvae L3    12 Rotenone 8 μg 12 hrs, larvae L3    8 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_06 mE1_20_mRNA_expression_cluster_09
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034921 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11183-RA
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele lethal | embryonic stage | germline clone | maternal effect Dcp1b53 lethal | embryonic stage | maternal effect, with Dcp1b53 Dcp1tT3 lethal | embryonic stage | maternal effect, with Dcp1tT3 Dcp1b53 lethal | pupal stage | recessive Dcp1442P lethal | recessive Dcp1b53 Dcp1EY16846 viable, with Scer\GAL4pnr-MD237 Dcp1GD7227 Sterility Allele female sterile | partially, with Dcp1b53 Dcp1tT3 female sterile | partially, with Dcp1tT3 Dcp1b53 Phenotype manifest in Allele cytoplasmic mRNA processing body, with Dcp1442P Dcp1tT2.R57A cytoplasmic mRNA processing body, with Dcp1tT2.R57A Dcp1442P egg chamber | germline clone Dcp1442P embryo | anterior | maternal effect Dcp1b53 embryonic abdominal segment | maternal effect Dcp1b53 embryonic abdominal segment | maternal effect, with Dcp1b53 Dcp1tT3 embryonic abdominal segment | maternal effect, with Dcp1tT3 Dcp1b53 pole cell | maternal effect, with Dcp1b53 Dcp1tT3 pole cell | maternal effect, with Dcp1tT3 Dcp1b53
Classical Alleles ( 5 )
For All Classical Alleles Show
Allele of Dcp1 Class Mutagen Stocks Known lesion Dcp1EY16846 P-element activity 2 -- Dcp1GS11684 1 Yes Dcp1442P 0 Yes Dcp1b53 P-element activity 0 Yes Dcp1SH2322 0 --
Alleles Carried on Transgenic Constructs ( 12 )
For All Alleles Carried on Transgenic Constructs Show
Allele of Dcp1 Class Mutagen Stocks Known lesion Dcp1GD7227 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes Dcp1KK101204 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes Dcp1N180.Scer\UAS.P\T.T:Ivir\HA1 in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes Dcp1NIG.11183R in vitro construct - RNAi in vitro construct - regulatory fusion 0 Yes Dcp1Scer\UAS.P\T.T:Ivir\HA1 in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes Dcp1T:Avic\GFP-EYFP in vitro construct - coding region fusion 0 Yes Dcp1tT1 in vitro construct - genomic fragment 0 Yes Dcp1tT2.R57A in vitro construct - amino acid replacement 0 Yes Dcp1tT2 in vitro construct - genomic fragment 0 Yes Dcp1tT3 in vitro construct - genomic fragment 0 Yes Dcp1tT4 in vitro construct 0 Yes Dcp1αTub67C.T:Avic\GFP in vitro construct - regulatory fusion in vitro construct - coding region fusion 0 Yes
Aneuploid Aberrations
Disrupted in	Df(2R)Exel6080 (Ryder, 2004.4.26)
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD7227} NA P{KK101204} NA P{NIG.11183R} NA P{UASp-HA-Dcp1} NA P{UASp-HA-N180-Dcp1} NA characterization construct P{Dcp1.T1} NA P{Dcp1.T2.R57A} NA P{Dcp1.T2} NA P{Dcp1.T3} NA P{Dcp1.T4} NA P{Dcp1.T5} NA P{YFP-Dcp1.L} NA P{αTub67C-Dcp1.GFP} NA
Insertions
	Type of insertions Name Expression data insertion of enhancer trap P{lacW}Dcp1SH2322 No P{lacW}l(2)SH1489SH1489 No P{lArB}Dcp1b53 No insertion of mobile activating element P{EPgy2}Dcp1EY16846 NA P{GSV6}Dcp1GS11684 NA
Gene Ontology: Function, Process & Cellular Component ( 11 unique terms )
Terms Based on Experimental Evidence ( 11 terms )
Molecular Function
CV term Evidence References
NOT m7G(5')pppN diphosphatase activity inferred from direct assay (Lin et al., 2008) protein binding inferred from physical interaction with UniProtKB:Q9VKK1 (assigned by UniProtKB) (Jinek et al., 2008)
Biological Process
CV term Evidence References
gene silencing by miRNA inferred from mutant phenotype (Rehwinkel et al., 2005) nuclear-transcribed mRNA catabolic process inferred from mutant phenotype (Lin et al., 2006) NOT nuclear-transcribed mRNA catabolic process, nonsense-mediated decay inferred from mutant phenotype (Rehwinkel et al., 2005) pole plasm oskar mRNA localization inferred from mutant phenotype (Lin et al., 2006) positive regulation of gene silencing by miRNA inferred from mutant phenotype (Pressman et al., 2012) regulation of cytoplasmic mRNA processing body assembly inferred from mutant phenotype (Lin et al., 2008)
Cellular Component
CV term Evidence References
cytoplasm inferred from direct assay (Lin et al., 2008) cytoplasmic mRNA processing body inferred from direct assay (Eulalio et al., 2007, Liu and Gall, 2007, Fan et al., 2011) P granule inferred from direct assay (Lin et al., 2006)
Terms Based on Predictions or Assertions ( 0 terms )
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
protein-protein
Interacting group Assay References
Dcp1 - CG8097 anti tag coimmunoprecipitation, peptide massfingerprinting, experimental knowledge based (Mintseris et al., 2009.11.23, Guruharsha et al., 2011) Dcp1 - Fatp anti tag coimmunoprecipitation, peptide massfingerprinting (Mintseris et al., 2009.11.23)
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions Dcp1 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 63383 DroID - A comprehensive database of gene and protein interactions. • FBgn0034921 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 37790
Orthologs
OrthoDB Orthologs (43) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6ZGPZF Dipteran inclusive ortholog search EOG69CQHG Insect inclusive ortholog search EOG66Q5PB Arthropod inclusive ortholog search EOG679CPV Metazoa inclusive ortholog search EOG6QP0Q3
Orthologs in Drosophila Species (EOG6ZGPZF)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\Dcp1     Drosophila simulans   Dsim\GD25000 Y   Drosophila sechellia   Dsec\GM13666     Drosophila sechellia   Dsec\GM15497 Y   Drosophila erecta   Dere\GG19983 Y   Drosophila yakuba   Dyak\GE11516 Y   Drosophila ananassae   Dana\GF12057 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA10823 Y   Drosophila persimilis   Dper\GL10921 Y   Drosophila willistoni   Dwil\GK15859 Y   Drosophila virilis   Dvir\GJ21878 Y   Drosophila mojavensis   Dmoj\GI18845 Y   Drosophila grimshawi   Dgri\GH21691 Y
Orthologs in non-Drosophila Dipterans (EOG69CQHG)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL001187   Anopheles gambiae Malaria mosquito  Agam\AGAP012645   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ018538   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ005592
Orthologs in non-Dipteran Insects (EOG66Q5PB)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\Dcp1   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG010108   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH19427   Atta cephalotes Leafcutter ant  Acep\ACEP27905   Camponotus floridanus Florida carpenter ant  Cflo\CFLO22348   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL16258   Linepithema humile Argentine ant  Lhum\LH10898   Pogonomyrmex barbatus Red harvester ant  Pbar\PB20867   Acyrthosiphon pisum Pea aphid  Apim\ACYPI009387   Bombyx mori Silkmoth  Bmor\BGIBMGA014121   Pediculus humanus Human body louse  Phum\PHUM523560   Tribolium castaneum Red flour beetle  Tcas\TC012192
Orthologs in non-Insect Arthropods (EOG679CPV)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Daphnia pulex Water flea  Dpux\Syt4   Ixodes scapularis Deer tick  Isca\ISCW022477
Orthologs in non-Arthropod Metazoa (EOG6QP0Q3)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\dcap-1   Danio rerio Zebrafish  Drer\dcp1b   Danio rerio Zebrafish  Drer\ENSDARG00000003323   Xenopus tropicalis Western clawed frog  Xtro\dcp1a   Xenopus tropicalis Western clawed frog  Xtro\dcp1b   Gallus gallus Domestic chicken  Ggal\DCP1A   Gallus gallus Domestic chicken  Ggal\DCP1B   Mus musculus House mouse  Mmus\Dcp1b   Mus musculus House mouse  Mmus\Dcp1a   Rattus norvegicus Norway rat  Rnor\Dcp1a   Rattus norvegicus Norway rat  Rnor\Dcp1b   Homo sapiens Human  Hsap\DCP1B
Human Orthologs (1)
Gene OMIM HGNC Hsap\DCP1B
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD25000 Drosophila sechellia Dsec\GM15497 Drosophila erecta Dere\GG19983 Drosophila yakuba Dyak\GE11516 Drosophila ananassae Dana\GF12057 Drosophila pseudoobscura pseudoobscura Dpse\GA10823 Drosophila persimilis Dper\GL10921 Drosophila willistoni Dwil\GK15859 Drosophila virilis Dvir\GJ21878 Drosophila mojavensis Dmoj\GI18845 Drosophila grimshawi Dgri\GH21691
Stocks & Reagents
Stocks Listed in FlyBase ( 6 )
Bloomington	17471 y1 w67c23; P{EPgy2}Dcp1EY16846/CyO
Kyoto	203514 y1 w67c23; P{GSV6}Dcp1GS11684/SM1 114473 yd2 w1118 P{ey-FLP.N}2; P{neoFRT}42D P{EPgy2}Dcp1EY16846 /CyO y+
VDRC	v105638 P{KK101204}VIE-260B v31442 w1118; P{GD7227}v31442 v31441 w1118; P{GD7227}v31441/TM3
Genomic Clones ( 1 )
	BACR05F24 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 75 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH04763
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT24662 GH17920 GH26992 GM04592 GM10007 GM21328 LD26267 LD46570 RE03822 RE14177 RE36332 RH39292 RH58104 RH60039
Other clones	107815 CK01.23B.D10 CK01.55C.D3 CK01.103C.A4 Dmel_dig_000845_0641_3773 Dmel_neb_001515_0403_3745 Dmel_neb_004044_0119_3239 Dmel_neb_010123_0381_2015 Dmel_neb_010922_0430_1697 Dmel_neb_012445_0329_3687 Dmel_neb_015314_0332_0563 EK021345 EK125801 EK129803 EK234032 RP001001074 RP001008315 RP001008438 RP001010195 RP001010483 RP001012093 RP001012423 RP001017570 RP001018368 RP001020442 RP001020555 RP001021210 RP001022164 RP001022475 RP001022579 RP001022989 RP001023321 RP001023637 RP001025369 RP001028212 RP001028470 RP001030007 RP001030100 RP001030867 RP001031790 RP001032578 RP001034817 RP001036210 RP001036732 RP001039544 RP001040118 RP001041673 RP001042645 RP001043497 RP001045460 RP001046738 RP001048146 RP001048374 RP001049323 RP001049412 RP001050219 RP001051013 RP001053284 RP001053743 RP001055296
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0034921 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37790
Antibody Information
	monoclonal (Miyoshi et al., 2009)
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of	Source for identity of: Dcp1 CG11183 (Lin, 2006.2.28)
Source for database merge of	Source for merge of: CG11183 anon-WO0118547.163 (FlyBase, 1996-)
Additional comments	Source for merge of CG11183 anon-WO0118547.163 was sequence comparison (date:051113). (FlyBase, 1996-)
Other Comments
	dsRNA made from templates generated with primers directed against this gene is transfected into S2 cells to study the genes role in decapping. (Behm-Ansmant et al., 2006) Dcp1 is required for degradation of osk, bcd and twe mRNAs during embryogenesis. (Lin et al., 2006) Dcp1 is required for the posterior localization of osk mRNA in the oocyte. (Lin et al., 2006) dsRNA has been made from templates generated with primers directed against this gene. (Rehwinkel et al., 2005) In contrast to the decapping enzymes in yeast and humans, the Dcp1 product does not seem to participate in the nonsense-mediated decay pathway. (Rehwinkel et al., 2005) Area matching Drosophila EST AI0643375. (Davies, 2001.3.15)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_137998 NM_001169811 RefSeq (Proteins) • NP_611842 NP_001163282 DDBJ / EMBL / GenBank • AAF47089 ACZ94554 AI064375 AI401968 AX094039 Entrez Gene - A searchable database of RefSeq genes. • 37790 UniProtKB/TrEMBL • Q9W1H5
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Dcp1-like decapping (IPR010334) Pleckstrin homology-like domain (IPR011993)
Linkouts
	BioGRID - A database of protein and genetic interactions • 63383 DroID - A comprehensive database of gene and protein interactions. • FBgn0034921 DRSC - Results from RNAi screens. • FBgn0034921 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0034921 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG11183-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0034921 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 37790 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 37790 modMine - Data generated by the modENCODE project. • FBgn0034921
Synonyms & Secondary IDs ( 9 )
Reported As
Symbol Synonym	anon-WO0118547.163   CG11183 (Giot et al., 2003, Lin et al., 2006, Keleman et al., 2009.8.5, Jäger and Dorner, 2010, Miyoshi et al., 2009) Dcp1 (Zaessinger et al., 2006, Lindquist et al., 2011, Hillebrand et al., 2010, Barbee et al., 2006, Lin et al., 2008, Lauwers et al., 2009, Snee and Macdonald, 2009, Liu and Gall, 2007, Olivieri et al., 2010, Habermann et al., 2012, Pressman et al., 2012, Japanese National Institute of Genetics, 2012.5.21) DCP1 (Rehwinkel et al., 2005, Tritschler et al., 2007, Eulalio et al., 2007, Tritschler et al., 2009, Jinek et al., 2008, Eulalio et al., 2007, Lee et al., 2009, Tritschler et al., 2008, Behm-Ansmant et al., 2006, Farny et al., 2009, Haas et al., 2010, Jäger and Dorner, 2010, Beerman and Jongens, 2011, Miyoshi et al., 2009) Dcp-1 (Navarro et al., 2009, Ditzel et al., 2008, Pressman et al., 2012) Dcp1p (Valencia-Sanchez et al., 2006) dDcp1 (Lin, 2006.2.28, Lin et al., 2006, Lin et al., 2004, Seydoux and Braun, 2006, Lin et al., 2006, Lin et al., 2008, Zabolotskaya et al., 2008, Reich et al., 2009, Lin et al., 2008, Fan et al., 2011) dDCP1 (Lim et al., 2009)
Name Synonym	Decapping protein 1 (Lin et al., 2006, Lin et al., 2006, Lin et al., 2008)
Secondary FlyBase IDs
	FBgn0062201
References ( 59 )
Generate a list of	All references relating to this gene ( 59 )
List References by type	Research paper  ( 34 ) Supplementary material  ( 7 ) Review  ( 2 ) Personal communication to FlyBase  ( 8 ) Abstract  ( 2 ) FlyBase analysis  ( 3 ) Stock list  ( 1 ) Patent  ( 1 ) DNA/RNA sequence record  ( 1 )
Recent research papers ( 6 )
	Kibanov et al., 2013, Anal. Biochem. 436(1): 55--64 Multicolor fluorescence imaging of whole-mount Drosophila testes for studying spermatogenesis. [FBrf0221049] Habermann et al., 2012, Mol. Cell. Biol. 32(17): 3554--3569 Functional Analysis of Centrosomal Kinase Substrates in Drosophila melanogaster Reveals a New Function of the Nuclear Envelope Component Otefin in Cell Cycle Progression. [FBrf0219185] Pressman et al., 2012, G3 (Bethesda) 2(4): 437--448 A Systematic Genetic Screen to Dissect the MicroRNA Pathway in Drosophila. [FBrf0218180] Beerman and Jongens, 2011, Neuroscience 181: 48--66 A non-canonical start codon in the Drosophila fragile X gene yields two functional isoforms. [FBrf0213401] Fan et al., 2011, PLoS ONE 6(5): e20612 Drosophila Ge-1 Promotes P Body Formation and oskar mRNA Localization. [FBrf0213914] Lindquist et al., 2011, Genome Res. 21(3): 433--446 Genome-scale RNAi on living-cell microarrays identifies novel regulators of Drosophila melanogaster TORC1-S6K pathway signaling. [FBrf0213199] Show all research papers ...
Recent reviews (0)
	All reviews listed in FlyBase were published before 2011 Show reviews ...