General Information Symbol Dmel\ MAN1Species D. melanogaster Name MAN1 Annotation symbol CG3167 Feature type protein_coding_gene FlyBase ID FBgn0034962 Gene Model Status Current Stock availability 3 publicly
available Also Known As dMAN1 Genomic Location Chromosome (arm) 2R Recombination map Cytogenetic map 60B5-60B5 Sequence location 2R:19,921,732..19,924,231 [+]
Genomic Maps
Summary Information Automatically generated summary
See sections below for more information The gene
MAN1 is referred to in FlyBase by the symbol
Dmel\MAN1 (CG3167, FBgn0034962). It is a protein_coding_gene from
Drosophila melanogaster . Its
molecular function is unknown. There is experimental evidence that it is involved in the
biological process : negative regulation of BMP signaling pathway.
14 alleles are reported . The
phenotypes of these alleles are annotated with: posterior crossvein; ovary; anterior crossvein; wing vein L4; testis; wing blade; wing; wing vein. It has
2 annotated transcripts and
2 annotated polypeptides .
Protein features are: Inner nuclear membrane protein MAN1; LEM domain; LEM/LEM-like domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1631696_s_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of MAN1. Gene sequence location is
2R:19921732..19924231 .
User Contributed Data
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Detailed Mapping Data
FlyBase Computed Cytological Location
Experimentally Determined Cytological Location
Experimentally Determined Recombination Data
Location Left of (cM) Right of (cM) Notes Gene Model & Products Comments on Gene
Model DGC clone appears problematic (LD24895): incomplete CDS.
Transcript Data Annotated Transcripts Additional Transcript Data
& Comments Reported size (kB) Comments External Data Crossreferences
Polypeptide Data Annotated
Polypeptides Additional Polypeptide
Data & Comments Reported size (kDa) Comments External Data Linkouts Crossreferences
domains - A database of protein families, domains, and functional sites
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank UniProtKB/Swiss-Prot UniProtKB/TrEMBL Mapped Features Mapped Features have been reorganized, please
see this article for details. Additional mapped features and mutations can
be found on GBrowse or related reports. External Data Linkouts Crossreferences Expression Data Transcript ExpressionComment: maternally deposited
Additional Descriptive Data
Marker for Subcellular Localization CV Term Polypeptide Expression
Additional Descriptive Data
Marker for Subcellular Localization (GO Cellular Component) Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference
FlyAtlas Anatomy Microarray
Linear, scaled to maximum expression level
Tissue
Expression Level
Larval Central Nervous System
183.675
Larval Midgut
62.8
Larval Hindgut
87.4
Larval Malpighian Tubules
78.7
Larval Fat Body
170.3
Larval Salivary Gland
168.7
Larval Trachea
168.1
Larval Carcass
113.225
Adult Head
117.1
Adult Eye
98.3
Adult Brain
175.9
Adult Thoracic-Abdominal Ganglion
156.5
Adult Crop
162.9
Adult Midgut
87.7
Adult Hindgut
86.4
Adult Malpighian Tubules
187.3
Adult Fat Body
129.8
Adult Salivary Gland
106.3
Adult Heart
105.9
Adult VirginFemale Spermatheca
129
Adult InseminatedFemale Spermatheca
145.9
Adult Ovary
658.5
Adult Testis
448.3
Adult Male Accessory Gland
137.7
Adult Carcass
142.5
Expression Level Scale
None
Low
Moderate
High
Linear, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
183.675
Larval Midgut
62.8
Larval Hindgut
87.4
Larval Malpighian Tubules
78.7
Larval Fat Body
170.3
Larval Salivary Gland
168.7
Larval Trachea
168.1
Larval Carcass
113.225
Adult Head
117.1
Adult Eye
98.3
Adult Brain
175.9
Adult Thoracic-Abdominal Ganglion
156.5
Adult Crop
162.9
Adult Midgut
87.7
Adult Hindgut
86.4
Adult Malpighian Tubules
187.3
Adult Fat Body
129.8
Adult Salivary Gland
106.3
Adult Heart
105.9
Adult VirginFemale Spermatheca
129
Adult InseminatedFemale Spermatheca
145.9
Adult Ovary
(658.5)
Adult Testis
448.3
Adult Male Accessory Gland
137.7
Adult Carcass
142.5
Expression Level Scale
None
Low
Moderate
High
Linear, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
183.675
Larval Midgut
62.8
Larval Hindgut
87.4
Larval Malpighian Tubules
78.7
Larval Fat Body
170.3
Larval Salivary Gland
168.7
Larval Trachea
168.1
Larval Carcass
113.225
Adult Head
117.1
Adult Eye
98.3
Adult Brain
175.9
Adult Thoracic-Abdominal Ganglion
156.5
Adult Crop
162.9
Adult Midgut
87.7
Adult Hindgut
86.4
Adult Malpighian Tubules
187.3
Adult Fat Body
129.8
Adult Salivary Gland
106.3
Adult Heart
105.9
Adult VirginFemale Spermatheca
129
Adult InseminatedFemale Spermatheca
145.9
Adult Ovary
658.5
Adult Testis
448.3
Adult Male Accessory Gland
137.7
Adult Carcass
142.5
Expression Level Scale
None
Low
Moderate
High
Very high
Linear, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
183.675
Larval Midgut
62.8
Larval Hindgut
87.4
Larval Malpighian Tubules
78.7
Larval Fat Body
170.3
Larval Salivary Gland
168.7
Larval Trachea
168.1
Larval Carcass
113.225
Adult Head
117.1
Adult Eye
98.3
Adult Brain
175.9
Adult Thoracic-Abdominal Ganglion
156.5
Adult Crop
162.9
Adult Midgut
87.7
Adult Hindgut
86.4
Adult Malpighian Tubules
187.3
Adult Fat Body
129.8
Adult Salivary Gland
106.3
Adult Heart
105.9
Adult VirginFemale Spermatheca
129
Adult InseminatedFemale Spermatheca
145.9
Adult Ovary
658.5
Adult Testis
448.3
Adult Male Accessory Gland
137.7
Adult Carcass
142.5
Expression Level Scale
Very high
log, scaled to maximum expression level
Tissue
Expression Level
Larval Central Nervous System
183.675
Larval Midgut
62.8
Larval Hindgut
87.4
Larval Malpighian Tubules
78.7
Larval Fat Body
170.3
Larval Salivary Gland
168.7
Larval Trachea
168.1
Larval Carcass
113.225
Adult Head
117.1
Adult Eye
98.3
Adult Brain
175.9
Adult Thoracic-Abdominal Ganglion
156.5
Adult Crop
162.9
Adult Midgut
87.7
Adult Hindgut
86.4
Adult Malpighian Tubules
187.3
Adult Fat Body
129.8
Adult Salivary Gland
106.3
Adult Heart
105.9
Adult VirginFemale Spermatheca
129
Adult InseminatedFemale Spermatheca
145.9
Adult Ovary
658.5
Adult Testis
448.3
Adult Male Accessory Gland
137.7
Adult Carcass
142.5
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to Moderate expression
Tissue
Expression Level
Larval Central Nervous System
183.675
Larval Midgut
62.8
Larval Hindgut
87.4
Larval Malpighian Tubules
78.7
Larval Fat Body
170.3
Larval Salivary Gland
168.7
Larval Trachea
168.1
Larval Carcass
113.225
Adult Head
117.1
Adult Eye
98.3
Adult Brain
175.9
Adult Thoracic-Abdominal Ganglion
156.5
Adult Crop
162.9
Adult Midgut
87.7
Adult Hindgut
86.4
Adult Malpighian Tubules
187.3
Adult Fat Body
129.8
Adult Salivary Gland
106.3
Adult Heart
105.9
Adult VirginFemale Spermatheca
129
Adult InseminatedFemale Spermatheca
145.9
Adult Ovary
658.5
Adult Testis
448.3
Adult Male Accessory Gland
137.7
Adult Carcass
142.5
Expression Level Scale
None
Low
Moderate
High
log, scaled to High level expression
Tissue
Expression Level
Larval Central Nervous System
183.675
Larval Midgut
62.8
Larval Hindgut
87.4
Larval Malpighian Tubules
78.7
Larval Fat Body
170.3
Larval Salivary Gland
168.7
Larval Trachea
168.1
Larval Carcass
113.225
Adult Head
117.1
Adult Eye
98.3
Adult Brain
175.9
Adult Thoracic-Abdominal Ganglion
156.5
Adult Crop
162.9
Adult Midgut
87.7
Adult Hindgut
86.4
Adult Malpighian Tubules
187.3
Adult Fat Body
129.8
Adult Salivary Gland
106.3
Adult Heart
105.9
Adult VirginFemale Spermatheca
129
Adult InseminatedFemale Spermatheca
145.9
Adult Ovary
658.5
Adult Testis
448.3
Adult Male Accessory Gland
137.7
Adult Carcass
142.5
Expression Level Scale
None
Low
Moderate
High
Very high
log, scaled to Very high expression
Tissue
Expression Level
Larval Central Nervous System
183.675
Larval Midgut
62.8
Larval Hindgut
87.4
Larval Malpighian Tubules
78.7
Larval Fat Body
170.3
Larval Salivary Gland
168.7
Larval Trachea
168.1
Larval Carcass
113.225
Adult Head
117.1
Adult Eye
98.3
Adult Brain
175.9
Adult Thoracic-Abdominal Ganglion
156.5
Adult Crop
162.9
Adult Midgut
87.7
Adult Hindgut
86.4
Adult Malpighian Tubules
187.3
Adult Fat Body
129.8
Adult Salivary Gland
106.3
Adult Heart
105.9
Adult VirginFemale Spermatheca
129
Adult InseminatedFemale Spermatheca
145.9
Adult Ovary
658.5
Adult Testis
448.3
Adult Male Accessory Gland
137.7
Adult Carcass
142.5
Expression Level Scale
None
Low
Moderate
High
Very high
Heatmap
Tissue
Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass
FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level
Tissue
Adult Expression Level
NA
Head
117.1
NA
Eye
98.3
NA
Brain
175.9
183.675
Central Nervous System
NA
NA
Thoracic-Abdominal Ganglion
156.5
NA
Crop
162.9
62.8
Midgut
87.7
87.4
Hindgut
86.4
78.7
Malpighian Tubules
187.3
170.3
Fat Body
129.8
168.7
Salivary Gland
106.3
NA
Heart
105.9
168.1
Trachea
NA
NA
VirginFemale Spermatheca
129
NA
InseminatedFemale Spermatheca
145.9
NA
Ovary
658.5
NA
Testis
448.3
NA
Male Accessory Gland
137.7
113.225
Carcass
142.5
modENCODE Anatomy RNA-Seq
Linear, scaled to maximum expression level
Tissue
Expression Level
imaginal disc, larvae L3 wandering
42
central nervous system, larvae L3
13
central nervous system, pupae P8
11
head, virgin 1-day female
6
head, virgin 4-day female
5
head, virgin 20-day female
7
head, mated 1-day female
8
head, mated 4-day female
7
head, mated 20-day female
7
head, mated 1-day male
7
head, mated 4-day male
10
head, mated 20-day male
11
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
2
digestive system, larvae L3 wandering
8
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
7
fat body, larvae L3 wandering
5
fat body, white prepupae
14
fat body, pupae P8
10
carcass, larvae L3 wandering
13
carcass, 1-day adult
7
carcass, 4-day adult
11
carcass, 20-day adult
9
ovary, virgin 4-day female
80
ovary, mated 4-day female
63
testis, mated 4-day male
62
accessory gland, mated 4-day male
10
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Linear, scaled to Moderate expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
(42)
central nervous system, larvae L3
13
central nervous system, pupae P8
11
head, virgin 1-day female
6
head, virgin 4-day female
5
head, virgin 20-day female
7
head, mated 1-day female
8
head, mated 4-day female
7
head, mated 20-day female
7
head, mated 1-day male
7
head, mated 4-day male
10
head, mated 20-day male
11
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
2
digestive system, larvae L3 wandering
8
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
7
fat body, larvae L3 wandering
5
fat body, white prepupae
14
fat body, pupae P8
10
carcass, larvae L3 wandering
13
carcass, 1-day adult
7
carcass, 4-day adult
11
carcass, 20-day adult
9
ovary, virgin 4-day female
(80)
ovary, mated 4-day female
(63)
testis, mated 4-day male
(62)
accessory gland, mated 4-day male
10
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
42
central nervous system, larvae L3
13
central nervous system, pupae P8
11
head, virgin 1-day female
6
head, virgin 4-day female
5
head, virgin 20-day female
7
head, mated 1-day female
8
head, mated 4-day female
7
head, mated 20-day female
7
head, mated 1-day male
7
head, mated 4-day male
10
head, mated 20-day male
11
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
2
digestive system, larvae L3 wandering
8
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
7
fat body, larvae L3 wandering
5
fat body, white prepupae
14
fat body, pupae P8
10
carcass, larvae L3 wandering
13
carcass, 1-day adult
7
carcass, 4-day adult
11
carcass, 20-day adult
9
ovary, virgin 4-day female
80
ovary, mated 4-day female
63
testis, mated 4-day male
62
accessory gland, mated 4-day male
10
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
42
central nervous system, larvae L3
13
central nervous system, pupae P8
11
head, virgin 1-day female
6
head, virgin 4-day female
5
head, virgin 20-day female
7
head, mated 1-day female
8
head, mated 4-day female
7
head, mated 20-day female
7
head, mated 1-day male
7
head, mated 4-day male
10
head, mated 20-day male
11
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
2
digestive system, larvae L3 wandering
8
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
7
fat body, larvae L3 wandering
5
fat body, white prepupae
14
fat body, pupae P8
10
carcass, larvae L3 wandering
13
carcass, 1-day adult
7
carcass, 4-day adult
11
carcass, 20-day adult
9
ovary, virgin 4-day female
80
ovary, mated 4-day female
63
testis, mated 4-day male
62
accessory gland, mated 4-day male
10
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Tissue
Expression Level
imaginal disc, larvae L3 wandering
42
central nervous system, larvae L3
13
central nervous system, pupae P8
11
head, virgin 1-day female
6
head, virgin 4-day female
5
head, virgin 20-day female
7
head, mated 1-day female
8
head, mated 4-day female
7
head, mated 20-day female
7
head, mated 1-day male
7
head, mated 4-day male
10
head, mated 20-day male
11
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
2
digestive system, larvae L3 wandering
8
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
7
fat body, larvae L3 wandering
5
fat body, white prepupae
14
fat body, pupae P8
10
carcass, larvae L3 wandering
13
carcass, 1-day adult
7
carcass, 4-day adult
11
carcass, 20-day adult
9
ovary, virgin 4-day female
80
ovary, mated 4-day female
63
testis, mated 4-day male
62
accessory gland, mated 4-day male
10
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
(42)
central nervous system, larvae L3
13
central nervous system, pupae P8
11
head, virgin 1-day female
6
head, virgin 4-day female
5
head, virgin 20-day female
7
head, mated 1-day female
8
head, mated 4-day female
7
head, mated 20-day female
7
head, mated 1-day male
7
head, mated 4-day male
10
head, mated 20-day male
11
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
2
digestive system, larvae L3 wandering
8
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
7
fat body, larvae L3 wandering
5
fat body, white prepupae
14
fat body, pupae P8
10
carcass, larvae L3 wandering
13
carcass, 1-day adult
7
carcass, 4-day adult
11
carcass, 20-day adult
9
ovary, virgin 4-day female
(80)
ovary, mated 4-day female
(63)
testis, mated 4-day male
(62)
accessory gland, mated 4-day male
10
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
42
central nervous system, larvae L3
13
central nervous system, pupae P8
11
head, virgin 1-day female
6
head, virgin 4-day female
5
head, virgin 20-day female
7
head, mated 1-day female
8
head, mated 4-day female
7
head, mated 20-day female
7
head, mated 1-day male
7
head, mated 4-day male
10
head, mated 20-day male
11
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
2
digestive system, larvae L3 wandering
8
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
7
fat body, larvae L3 wandering
5
fat body, white prepupae
14
fat body, pupae P8
10
carcass, larvae L3 wandering
13
carcass, 1-day adult
7
carcass, 4-day adult
11
carcass, 20-day adult
9
ovary, virgin 4-day female
80
ovary, mated 4-day female
63
testis, mated 4-day male
62
accessory gland, mated 4-day male
10
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Tissue
Expression Level
imaginal disc, larvae L3 wandering
42
central nervous system, larvae L3
13
central nervous system, pupae P8
11
head, virgin 1-day female
6
head, virgin 4-day female
5
head, virgin 20-day female
7
head, mated 1-day female
8
head, mated 4-day female
7
head, mated 20-day female
7
head, mated 1-day male
7
head, mated 4-day male
10
head, mated 20-day male
11
salivary gland, larvae L3 wandering
1
salivary gland, white prepupae
2
digestive system, larvae L3 wandering
8
digestive system, 1-day adult
6
digestive system, 4-day adult
10
digestive system, 20-day adult
7
fat body, larvae L3 wandering
5
fat body, white prepupae
14
fat body, pupae P8
10
carcass, larvae L3 wandering
13
carcass, 1-day adult
7
carcass, 4-day adult
11
carcass, 20-day adult
9
ovary, virgin 4-day female
80
ovary, mated 4-day female
63
testis, mated 4-day male
62
accessory gland, mated 4-day male
10
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Tissue
Expression Level
imaginal disc, larvae L3 wandering
central nervous system, larvae L3
central nervous system, pupae P8
head, virgin 1-day female
head, virgin 4-day female
head, virgin 20-day female
head, mated 1-day female
head, mated 4-day female
head, mated 20-day female
head, mated 1-day male
head, mated 4-day male
head, mated 20-day male
salivary gland, larvae L3 wandering
salivary gland, white prepupae
digestive system, larvae L3 wandering
digestive system, 1-day adult
digestive system, 4-day adult
digestive system, 20-day adult
fat body, larvae L3 wandering
fat body, white prepupae
fat body, pupae P8
carcass, larvae L3 wandering
carcass, 1-day adult
carcass, 4-day adult
carcass, 20-day adult
ovary, virgin 4-day female
ovary, mated 4-day female
testis, mated 4-day male
accessory gland, mated 4-day male
modENCODE Development RNA-Seq
Linear, scaled to maximum expression level
Developmental Stage
Expression Level
embryo 00-02hr
89
embryo 02-04hr
78
embryo 04-06hr
40
embryo 06-08hr
40
embryo 08-10hr
45
embryo 10-12hr
38
embryo 12-14hr
33
embryo 14-16hr
28
embryo 16-18hr
25
embryo 18-20hr
13
embryo 20-22hr
27
embryo 22-24hr
31
larva L1
7
larva L2
8
larva L3 12hr old
7
larva L3 puffstage 1-2
10
larva L3 puffstage 3-6
14
larva L3 puffstage 7-9
18
white prepupae new
17
white prepupae 12hr
19
white prepupae 24hr
26
pupae 2d postWPP
25
pupae 3d postWPP
18
pupae 4d postWPP
14
adult male 01day
20
adult male 05day
28
adult male 30day
24
adult female 01day
30
adult female 05day
64
adult female 30day
63
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Linear, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
(89)
embryo 02-04hr
(78)
embryo 04-06hr
(40)
embryo 06-08hr
(40)
embryo 08-10hr
(45)
embryo 10-12hr
(38)
embryo 12-14hr
(33)
embryo 14-16hr
(28)
embryo 16-18hr
25
embryo 18-20hr
13
embryo 20-22hr
(27)
embryo 22-24hr
(31)
larva L1
7
larva L2
8
larva L3 12hr old
7
larva L3 puffstage 1-2
10
larva L3 puffstage 3-6
14
larva L3 puffstage 7-9
18
white prepupae new
17
white prepupae 12hr
19
white prepupae 24hr
26
pupae 2d postWPP
25
pupae 3d postWPP
18
pupae 4d postWPP
14
adult male 01day
20
adult male 05day
(28)
adult male 30day
24
adult female 01day
(30)
adult female 05day
(64)
adult female 30day
(63)
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
89
embryo 02-04hr
78
embryo 04-06hr
40
embryo 06-08hr
40
embryo 08-10hr
45
embryo 10-12hr
38
embryo 12-14hr
33
embryo 14-16hr
28
embryo 16-18hr
25
embryo 18-20hr
13
embryo 20-22hr
27
embryo 22-24hr
31
larva L1
7
larva L2
8
larva L3 12hr old
7
larva L3 puffstage 1-2
10
larva L3 puffstage 3-6
14
larva L3 puffstage 7-9
18
white prepupae new
17
white prepupae 12hr
19
white prepupae 24hr
26
pupae 2d postWPP
25
pupae 3d postWPP
18
pupae 4d postWPP
14
adult male 01day
20
adult male 05day
28
adult male 30day
24
adult female 01day
30
adult female 05day
64
adult female 30day
63
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
89
embryo 02-04hr
78
embryo 04-06hr
40
embryo 06-08hr
40
embryo 08-10hr
45
embryo 10-12hr
38
embryo 12-14hr
33
embryo 14-16hr
28
embryo 16-18hr
25
embryo 18-20hr
13
embryo 20-22hr
27
embryo 22-24hr
31
larva L1
7
larva L2
8
larva L3 12hr old
7
larva L3 puffstage 1-2
10
larva L3 puffstage 3-6
14
larva L3 puffstage 7-9
18
white prepupae new
17
white prepupae 12hr
19
white prepupae 24hr
26
pupae 2d postWPP
25
pupae 3d postWPP
18
pupae 4d postWPP
14
adult male 01day
20
adult male 05day
28
adult male 30day
24
adult female 01day
30
adult female 05day
64
adult female 30day
63
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Developmental Stage
Expression Level
embryo 00-02hr
89
embryo 02-04hr
78
embryo 04-06hr
40
embryo 06-08hr
40
embryo 08-10hr
45
embryo 10-12hr
38
embryo 12-14hr
33
embryo 14-16hr
28
embryo 16-18hr
25
embryo 18-20hr
13
embryo 20-22hr
27
embryo 22-24hr
31
larva L1
7
larva L2
8
larva L3 12hr old
7
larva L3 puffstage 1-2
10
larva L3 puffstage 3-6
14
larva L3 puffstage 7-9
18
white prepupae new
17
white prepupae 12hr
19
white prepupae 24hr
26
pupae 2d postWPP
25
pupae 3d postWPP
18
pupae 4d postWPP
14
adult male 01day
20
adult male 05day
28
adult male 30day
24
adult female 01day
30
adult female 05day
64
adult female 30day
63
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Moderate expression
Developmental Stage
Expression Level
embryo 00-02hr
(89)
embryo 02-04hr
(78)
embryo 04-06hr
(40)
embryo 06-08hr
(40)
embryo 08-10hr
(45)
embryo 10-12hr
(38)
embryo 12-14hr
(33)
embryo 14-16hr
28
embryo 16-18hr
25
embryo 18-20hr
13
embryo 20-22hr
27
embryo 22-24hr
31
larva L1
7
larva L2
8
larva L3 12hr old
7
larva L3 puffstage 1-2
10
larva L3 puffstage 3-6
14
larva L3 puffstage 7-9
18
white prepupae new
17
white prepupae 12hr
19
white prepupae 24hr
26
pupae 2d postWPP
25
pupae 3d postWPP
18
pupae 4d postWPP
14
adult male 01day
20
adult male 05day
28
adult male 30day
24
adult female 01day
30
adult female 05day
(64)
adult female 30day
(63)
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Developmental Stage
Expression Level
embryo 00-02hr
89
embryo 02-04hr
78
embryo 04-06hr
40
embryo 06-08hr
40
embryo 08-10hr
45
embryo 10-12hr
38
embryo 12-14hr
33
embryo 14-16hr
28
embryo 16-18hr
25
embryo 18-20hr
13
embryo 20-22hr
27
embryo 22-24hr
31
larva L1
7
larva L2
8
larva L3 12hr old
7
larva L3 puffstage 1-2
10
larva L3 puffstage 3-6
14
larva L3 puffstage 7-9
18
white prepupae new
17
white prepupae 12hr
19
white prepupae 24hr
26
pupae 2d postWPP
25
pupae 3d postWPP
18
pupae 4d postWPP
14
adult male 01day
20
adult male 05day
28
adult male 30day
24
adult female 01day
30
adult female 05day
64
adult female 30day
63
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Developmental Stage
Expression Level
embryo 00-02hr
89
embryo 02-04hr
78
embryo 04-06hr
40
embryo 06-08hr
40
embryo 08-10hr
45
embryo 10-12hr
38
embryo 12-14hr
33
embryo 14-16hr
28
embryo 16-18hr
25
embryo 18-20hr
13
embryo 20-22hr
27
embryo 22-24hr
31
larva L1
7
larva L2
8
larva L3 12hr old
7
larva L3 puffstage 1-2
10
larva L3 puffstage 3-6
14
larva L3 puffstage 7-9
18
white prepupae new
17
white prepupae 12hr
19
white prepupae 24hr
26
pupae 2d postWPP
25
pupae 3d postWPP
18
pupae 4d postWPP
14
adult male 01day
20
adult male 05day
28
adult male 30day
24
adult female 01day
30
adult female 05day
64
adult female 30day
63
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Developmental Stage
Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day
modENCODE Cell Lines RNA-Seq
Linear, scaled to maximum expression level
Cell Line
Expression Level
Schneider line 2 S2R+
35
Schneider line 2 Sg4
18
embryonic 1182-4H
15
embryonic GM2
13
embryonic Kc167
18
embryonic S1
26
embryonic S3
15
leg disc CME L1
20
wing disc CME-W2
21
wing disc ML-DmD8
16
wing disc ML-DmD9
13
wing disc ML-DmD16-c3
23
wing disc ML-DmD21
9
wing disc ML-DmD32
13
haltere disc ML-DmD17-c3
35
eye-antennal disc ML-DmD11
15
antennal disc ML-DmD20-c5
19
mixed discs ML-DmD4-c1
20
CNS ML-DmBG1-c1
24
CNS ML-DmBG2-c2
25
tumorous blood cells mbn2
14
ovary fGS/OSS
20
ovary OSC
28
ovary OSS
14
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to Moderate expression
Cell Line
Expression Level
Schneider line 2 S2R+
(35)
Schneider line 2 Sg4
18
embryonic 1182-4H
15
embryonic GM2
13
embryonic Kc167
18
embryonic S1
26
embryonic S3
15
leg disc CME L1
20
wing disc CME-W2
21
wing disc ML-DmD8
16
wing disc ML-DmD9
13
wing disc ML-DmD16-c3
23
wing disc ML-DmD21
9
wing disc ML-DmD32
13
haltere disc ML-DmD17-c3
(35)
eye-antennal disc ML-DmD11
15
antennal disc ML-DmD20-c5
19
mixed discs ML-DmD4-c1
20
CNS ML-DmBG1-c1
24
CNS ML-DmBG2-c2
25
tumorous blood cells mbn2
14
ovary fGS/OSS
20
ovary OSC
(28)
ovary OSS
14
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Cell Line
Expression Level
Schneider line 2 S2R+
35
Schneider line 2 Sg4
18
embryonic 1182-4H
15
embryonic GM2
13
embryonic Kc167
18
embryonic S1
26
embryonic S3
15
leg disc CME L1
20
wing disc CME-W2
21
wing disc ML-DmD8
16
wing disc ML-DmD9
13
wing disc ML-DmD16-c3
23
wing disc ML-DmD21
9
wing disc ML-DmD32
13
haltere disc ML-DmD17-c3
35
eye-antennal disc ML-DmD11
15
antennal disc ML-DmD20-c5
19
mixed discs ML-DmD4-c1
20
CNS ML-DmBG1-c1
24
CNS ML-DmBG2-c2
25
tumorous blood cells mbn2
14
ovary fGS/OSS
20
ovary OSC
28
ovary OSS
14
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Cell Line
Expression Level
Schneider line 2 S2R+
35
Schneider line 2 Sg4
18
embryonic 1182-4H
15
embryonic GM2
13
embryonic Kc167
18
embryonic S1
26
embryonic S3
15
leg disc CME L1
20
wing disc CME-W2
21
wing disc ML-DmD8
16
wing disc ML-DmD9
13
wing disc ML-DmD16-c3
23
wing disc ML-DmD21
9
wing disc ML-DmD32
13
haltere disc ML-DmD17-c3
35
eye-antennal disc ML-DmD11
15
antennal disc ML-DmD20-c5
19
mixed discs ML-DmD4-c1
20
CNS ML-DmBG1-c1
24
CNS ML-DmBG2-c2
25
tumorous blood cells mbn2
14
ovary fGS/OSS
20
ovary OSC
28
ovary OSS
14
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Cell Line
Expression Level
Schneider line 2 S2R+
35
Schneider line 2 Sg4
18
embryonic 1182-4H
15
embryonic GM2
13
embryonic Kc167
18
embryonic S1
26
embryonic S3
15
leg disc CME L1
20
wing disc CME-W2
21
wing disc ML-DmD8
16
wing disc ML-DmD9
13
wing disc ML-DmD16-c3
23
wing disc ML-DmD21
9
wing disc ML-DmD32
13
haltere disc ML-DmD17-c3
35
eye-antennal disc ML-DmD11
15
antennal disc ML-DmD20-c5
19
mixed discs ML-DmD4-c1
20
CNS ML-DmBG1-c1
24
CNS ML-DmBG2-c2
25
tumorous blood cells mbn2
14
ovary fGS/OSS
20
ovary OSC
28
ovary OSS
14
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to Moderate expression
Cell Line
Expression Level
Schneider line 2 S2R+
(35)
Schneider line 2 Sg4
18
embryonic 1182-4H
15
embryonic GM2
13
embryonic Kc167
18
embryonic S1
26
embryonic S3
15
leg disc CME L1
20
wing disc CME-W2
21
wing disc ML-DmD8
16
wing disc ML-DmD9
13
wing disc ML-DmD16-c3
23
wing disc ML-DmD21
9
wing disc ML-DmD32
13
haltere disc ML-DmD17-c3
(35)
eye-antennal disc ML-DmD11
15
antennal disc ML-DmD20-c5
19
mixed discs ML-DmD4-c1
20
CNS ML-DmBG1-c1
24
CNS ML-DmBG2-c2
25
tumorous blood cells mbn2
14
ovary fGS/OSS
20
ovary OSC
28
ovary OSS
14
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Cell Line
Expression Level
Schneider line 2 S2R+
35
Schneider line 2 Sg4
18
embryonic 1182-4H
15
embryonic GM2
13
embryonic Kc167
18
embryonic S1
26
embryonic S3
15
leg disc CME L1
20
wing disc CME-W2
21
wing disc ML-DmD8
16
wing disc ML-DmD9
13
wing disc ML-DmD16-c3
23
wing disc ML-DmD21
9
wing disc ML-DmD32
13
haltere disc ML-DmD17-c3
35
eye-antennal disc ML-DmD11
15
antennal disc ML-DmD20-c5
19
mixed discs ML-DmD4-c1
20
CNS ML-DmBG1-c1
24
CNS ML-DmBG2-c2
25
tumorous blood cells mbn2
14
ovary fGS/OSS
20
ovary OSC
28
ovary OSS
14
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Cell Line
Expression Level
Schneider line 2 S2R+
35
Schneider line 2 Sg4
18
embryonic 1182-4H
15
embryonic GM2
13
embryonic Kc167
18
embryonic S1
26
embryonic S3
15
leg disc CME L1
20
wing disc CME-W2
21
wing disc ML-DmD8
16
wing disc ML-DmD9
13
wing disc ML-DmD16-c3
23
wing disc ML-DmD21
9
wing disc ML-DmD32
13
haltere disc ML-DmD17-c3
35
eye-antennal disc ML-DmD11
15
antennal disc ML-DmD20-c5
19
mixed discs ML-DmD4-c1
20
CNS ML-DmBG1-c1
24
CNS ML-DmBG2-c2
25
tumorous blood cells mbn2
14
ovary fGS/OSS
20
ovary OSC
28
ovary OSS
14
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Cell Line
Expression Level
Schneider line 2 S2R+
Schneider line 2 Sg4
embryonic 1182-4H
embryonic GM2
embryonic Kc167
embryonic S1
embryonic S3
leg disc CME L1
wing disc CME-W2
wing disc ML-DmD8
wing disc ML-DmD9
wing disc ML-DmD16-c3
wing disc ML-DmD21
wing disc ML-DmD32
haltere disc ML-DmD17-c3
eye-antennal disc ML-DmD11
antennal disc ML-DmD20-c5
mixed discs ML-DmD4-c1
CNS ML-DmBG1-c1
CNS ML-DmBG2-c2
tumorous blood cells mbn2
ovary fGS/OSS
ovary OSC
ovary OSS
modENCODE Treatments RNA-Seq
Linear, scaled to maximum expression level
Treatment
Expression Level
extended cold, 4-day adult
10
cold shock, 4-day adult
7
heat shock, 4-day adult
24
Cadmium 50 mM 6 hrs, larvae L3
6
Cadmium 50 mM 12 hrs, larvae L3
9
Cadmium 50 mM 48 hrs, 4-day adult
20
Cadmium 100 mM 48 hrs, 4-day adult
41
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
35
Zinc 5 mM 12 hrs, larvae L3
3
Zinc 4.5 mM 48 hrs, 4-day adult
18
Ethanol 2.5% 3 hrs, larvae L3
38
Ethanol 5% 3 hrs, larvae L3
6
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
41
Caffeine 25 mg/ml 48 hrs, 4-day adult
14
Paraquat 5 mM 48 hrs, 4-day adult
39
Paraquat 10 mM 48 hrs, 4-day adult
34
Rotenone 2 μg 12 hrs, larvae L3
7
Rotenone 8 μg 12 hrs, larvae L3
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to Moderate expression
Treatment
Expression Level
extended cold, 4-day adult
10
cold shock, 4-day adult
7
heat shock, 4-day adult
24
Cadmium 50 mM 6 hrs, larvae L3
6
Cadmium 50 mM 12 hrs, larvae L3
9
Cadmium 50 mM 48 hrs, 4-day adult
20
Cadmium 100 mM 48 hrs, 4-day adult
(41)
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
(35)
Zinc 5 mM 12 hrs, larvae L3
3
Zinc 4.5 mM 48 hrs, 4-day adult
18
Ethanol 2.5% 3 hrs, larvae L3
(38)
Ethanol 5% 3 hrs, larvae L3
6
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
(41)
Caffeine 25 mg/ml 48 hrs, 4-day adult
14
Paraquat 5 mM 48 hrs, 4-day adult
(39)
Paraquat 10 mM 48 hrs, 4-day adult
(34)
Rotenone 2 μg 12 hrs, larvae L3
7
Rotenone 8 μg 12 hrs, larvae L3
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
Linear, scaled to High expression
Treatment
Expression Level
extended cold, 4-day adult
10
cold shock, 4-day adult
7
heat shock, 4-day adult
24
Cadmium 50 mM 6 hrs, larvae L3
6
Cadmium 50 mM 12 hrs, larvae L3
9
Cadmium 50 mM 48 hrs, 4-day adult
20
Cadmium 100 mM 48 hrs, 4-day adult
41
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
35
Zinc 5 mM 12 hrs, larvae L3
3
Zinc 4.5 mM 48 hrs, 4-day adult
18
Ethanol 2.5% 3 hrs, larvae L3
38
Ethanol 5% 3 hrs, larvae L3
6
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
41
Caffeine 25 mg/ml 48 hrs, 4-day adult
14
Paraquat 5 mM 48 hrs, 4-day adult
39
Paraquat 10 mM 48 hrs, 4-day adult
34
Rotenone 2 μg 12 hrs, larvae L3
7
Rotenone 8 μg 12 hrs, larvae L3
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Linear, scaled to Extremely high expression
Treatment
Expression Level
extended cold, 4-day adult
10
cold shock, 4-day adult
7
heat shock, 4-day adult
24
Cadmium 50 mM 6 hrs, larvae L3
6
Cadmium 50 mM 12 hrs, larvae L3
9
Cadmium 50 mM 48 hrs, 4-day adult
20
Cadmium 100 mM 48 hrs, 4-day adult
41
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
35
Zinc 5 mM 12 hrs, larvae L3
3
Zinc 4.5 mM 48 hrs, 4-day adult
18
Ethanol 2.5% 3 hrs, larvae L3
38
Ethanol 5% 3 hrs, larvae L3
6
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
41
Caffeine 25 mg/ml 48 hrs, 4-day adult
14
Paraquat 5 mM 48 hrs, 4-day adult
39
Paraquat 10 mM 48 hrs, 4-day adult
34
Rotenone 2 μg 12 hrs, larvae L3
7
Rotenone 8 μg 12 hrs, larvae L3
4
Expression Level Scale
Extremely high
log, scaled to maximum expression level
Treatment
Expression Level
extended cold, 4-day adult
10
cold shock, 4-day adult
7
heat shock, 4-day adult
24
Cadmium 50 mM 6 hrs, larvae L3
6
Cadmium 50 mM 12 hrs, larvae L3
9
Cadmium 50 mM 48 hrs, 4-day adult
20
Cadmium 100 mM 48 hrs, 4-day adult
41
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
35
Zinc 5 mM 12 hrs, larvae L3
3
Zinc 4.5 mM 48 hrs, 4-day adult
18
Ethanol 2.5% 3 hrs, larvae L3
38
Ethanol 5% 3 hrs, larvae L3
6
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
41
Caffeine 25 mg/ml 48 hrs, 4-day adult
14
Paraquat 5 mM 48 hrs, 4-day adult
39
Paraquat 10 mM 48 hrs, 4-day adult
34
Rotenone 2 μg 12 hrs, larvae L3
7
Rotenone 8 μg 12 hrs, larvae L3
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
log, scaled to Moderate expression
Treatment
Expression Level
extended cold, 4-day adult
10
cold shock, 4-day adult
7
heat shock, 4-day adult
24
Cadmium 50 mM 6 hrs, larvae L3
6
Cadmium 50 mM 12 hrs, larvae L3
9
Cadmium 50 mM 48 hrs, 4-day adult
20
Cadmium 100 mM 48 hrs, 4-day adult
(41)
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
(35)
Zinc 5 mM 12 hrs, larvae L3
3
Zinc 4.5 mM 48 hrs, 4-day adult
18
Ethanol 2.5% 3 hrs, larvae L3
(38)
Ethanol 5% 3 hrs, larvae L3
6
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
(41)
Caffeine 25 mg/ml 48 hrs, 4-day adult
14
Paraquat 5 mM 48 hrs, 4-day adult
(39)
Paraquat 10 mM 48 hrs, 4-day adult
(34)
Rotenone 2 μg 12 hrs, larvae L3
7
Rotenone 8 μg 12 hrs, larvae L3
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
log, scaled to High expression
Treatment
Expression Level
extended cold, 4-day adult
10
cold shock, 4-day adult
7
heat shock, 4-day adult
24
Cadmium 50 mM 6 hrs, larvae L3
6
Cadmium 50 mM 12 hrs, larvae L3
9
Cadmium 50 mM 48 hrs, 4-day adult
20
Cadmium 100 mM 48 hrs, 4-day adult
41
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
35
Zinc 5 mM 12 hrs, larvae L3
3
Zinc 4.5 mM 48 hrs, 4-day adult
18
Ethanol 2.5% 3 hrs, larvae L3
38
Ethanol 5% 3 hrs, larvae L3
6
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
41
Caffeine 25 mg/ml 48 hrs, 4-day adult
14
Paraquat 5 mM 48 hrs, 4-day adult
39
Paraquat 10 mM 48 hrs, 4-day adult
34
Rotenone 2 μg 12 hrs, larvae L3
7
Rotenone 8 μg 12 hrs, larvae L3
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
log, scaled to Extremely high expression
Treatment
Expression Level
extended cold, 4-day adult
10
cold shock, 4-day adult
7
heat shock, 4-day adult
24
Cadmium 50 mM 6 hrs, larvae L3
6
Cadmium 50 mM 12 hrs, larvae L3
9
Cadmium 50 mM 48 hrs, 4-day adult
20
Cadmium 100 mM 48 hrs, 4-day adult
41
Copper 0.5 mM 12 hrs, larvae L3
3
Copper 15 mM 48 hrs, 4-day adult
35
Zinc 5 mM 12 hrs, larvae L3
3
Zinc 4.5 mM 48 hrs, 4-day adult
18
Ethanol 2.5% 3 hrs, larvae L3
38
Ethanol 5% 3 hrs, larvae L3
6
Ethanol 10% 3 hrs, larvae L3
7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
41
Caffeine 25 mg/ml 48 hrs, 4-day adult
14
Paraquat 5 mM 48 hrs, 4-day adult
39
Paraquat 10 mM 48 hrs, 4-day adult
34
Rotenone 2 μg 12 hrs, larvae L3
7
Rotenone 8 μg 12 hrs, larvae L3
4
Expression Level Scale
Very low
Low
Moderate
Moderately high
High
Very high
Extremely high
Heatmap
Treatment
Expression Level
extended cold, 4-day adult
cold shock, 4-day adult
heat shock, 4-day adult
Cadmium 50 mM 6 hrs, larvae L3
Cadmium 50 mM 12 hrs, larvae L3
Cadmium 50 mM 48 hrs, 4-day adult
Cadmium 100 mM 48 hrs, 4-day adult
Copper 0.5 mM 12 hrs, larvae L3
Copper 15 mM 48 hrs, 4-day adult
Zinc 5 mM 12 hrs, larvae L3
Zinc 4.5 mM 48 hrs, 4-day adult
Ethanol 2.5% 3 hrs, larvae L3
Ethanol 5% 3 hrs, larvae L3
Ethanol 10% 3 hrs, larvae L3
Caffeine 1.5 mg/ml 4 hrs, larvae L3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
Caffeine 25 mg/ml 48 hrs, 4-day adult
Paraquat 5 mM 48 hrs, 4-day adult
Paraquat 10 mM 48 hrs, 4-day adult
Rotenone 2 μg 12 hrs, larvae L3
Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
External Data & Images
Linkouts
- Cell culture data for RNAi and other high-throughput technologies
- Adult expression by tissue, using Affymetrix Dros2 array
Alleles & Phenotypes Summary of Allele Phenotypes Classical Alleles ( 9 ) For All Classical Alleles Show Alleles Carried on Transgenic Constructs
( 5 ) For All Alleles Carried on Transgenic
Constructs Show Aneuploid Aberrations Disrupted in Partially disrupted in Transgenic Constructs & Insertions
Transgenic Constructs characterization construct
Insertions Gene Ontology: Function, Process
& Cellular Component ( 2 unique terms ) Terms Based on
Experimental Evidence ( 1 term ) Molecular Function ( 0 terms) Biological Process inferred from direct assay
Cellular Component ( 0 terms) Terms Based on Predictions or
Assertions ( 1 term ) Molecular Function ( 0 terms) Biological Process ( 0 terms) Cellular Component Sequence Ontology: Class of Gene Interactions & Pathways
Summary of Physical Interactions
protein-protein anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
Summary of Genetic Interactions Interacts with Please look at the allele data
for full details of the genetic interactions
External Data Linkouts
- A comprehensive database of gene and protein interactions.
Protein-protein interactions (PPI) from both known and predicted PPI data sets.
Orthologs
OrthoDB Orthologs (48)
- based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
OrthoDB orthology group searches
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
Orthologs in Drosophila Species
(EOG6CZC1H )
Drosophila melanogaster
fruit fly
Drosophila pseudoobscura pseudoobscura
Y
Orthologs in non-Drosophila Dipterans
(EOG6VHKFN )
Aedes aegypti
Yellow fever mosquito
Anopheles gambiae
Malaria mosquito
Culex quinquefasciatus
Southern house mosquito
Orthologs in non-Dipteran Insects
(EOG6XGXV8 )
Apis mellifera
Western honey bee
Amel\GB47978
Apis mellifera
Western honey bee
Amel\GB44747
Nasonia vitripennis
Parasitic wasp
Nvit\Nasvi2EG002725
Acromyrmex echinatior
Panamanian leafcutter ant
Aech\AECH21167
Atta cephalotes
Leafcutter ant
Acep\ACEP17500
Camponotus floridanus
Florida carpenter ant
Cflo\CFLO13864
Camponotus floridanus
Florida carpenter ant
Cflo\CFLO13865
Harpegnathos saltator
Jerdons jumping ant
Hsal\HSAL20781
Linepithema humile
Argentine ant
Lhum\LH12403
Pogonomyrmex barbatus
Red harvester ant
Pbar\PB14480
Solenopsis invicta
Red fire ant
Sinv\SINV25638
Acyrthosiphon pisum
Pea aphid
Acyrthosiphon pisum
Pea aphid
Pediculus humanus
Human body louse
Tribolium castaneum
Red flour beetle
Orthologs in non-Insect Arthropods
(EOG6X0K7M )
Ixodes scapularis
Deer tick
Orthologs in non-Arthropod Metazoa
(EOG62RS1N )
Caenorhabditis elegans
Nematode
Strongylocentrotus purpuratus
Purple sea urchin
Strongylocentrotus purpuratus
Purple sea urchin
Xenopus tropicalis
Western clawed frog
Gallus gallus
Domestic chicken
Gallus gallus
Domestic chicken
Rattus norvegicus
Norway rat
Rattus norvegicus
Norway rat
Human Orthologs (2)AAA Orthologs (11)
based on analysis using Dmel annotation version 4.3
Drosophila pseudoobscura pseudoobscura
Stocks & Reagents Stocks Listed in FlyBase ( 3 )Bloomington VDRC Genomic Clones ( 1 )Please Note FlyBase no
longer curates genomic clone accessions so this list
may not be complete
cDNA Clones ( 71 )Please Note This section lists
cDNAs and ESTs that fall within the genomic extent
of the gene model, which may include cDNAs and ESTs
of genes within introns, or of overlapping genes.
Please see
GBrowse for alignment of the cDNAs and ESTs
to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones Other clones cDNA Clones, End Sequenced
(ESTs) BDGP DGC clones Other clones RNAi & Array Information Linkouts
- Results from RNAi screens.
- GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
Antibody Information
Other Information Discoverer Etymology Identification Relationship to Other Genes Source for database identity of Source for identity of: MAN1 CG3167
Source for database merge of Source for merge of: CG3167 BcDNA:LD24895
Additional comments Source for merge of CG3167 BcDNA:LD24895 was a shared cDNA (date:020730).
Other Comments The C-terminus of
MAN1 is not required for larval muscle development or innervation.
External Crossreferences & Linkouts
Sequence Crossreferences
- A searchable database of RefSeq genes.
Other Crossreferences
domains - A database of protein families, domains, and functional sites
- Patterns of gene expression in Drosophila embryogenesis
Linkouts
- A comprehensive database of gene and protein interactions.
- Results from RNAi screens.
- Cell culture data for RNAi and other high-throughput technologies
- Adult expression by tissue, using Affymetrix Dros2 array
- Integrated genomics database for Drosophila, Anopheles, and C.elegans
- GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
Protein-protein interactions (PPI) from both known and predicted PPI data sets.
- Data generated by the modENCODE project.
Synonyms & Secondary IDs
( 4 )Reported As Symbol Synonym Name Synonym Secondary FlyBase
IDs References ( 20 )Research paper Wagner et al., 2010, Dev. Biol. 339(1): 1--13The Drosophila LEM-domain protein MAN1 antagonizes BMP signaling at the neuromuscular junction and the wing crossveins. [FBrf0210050] Pinto et al., 2008, Genetics 180(1): 133--145Tissue-specific defects are caused by loss of the Drosophila MAN1 LEM domain protein. [FBrf0207348] Wagner et al., 2006, Europ. J. Cell Biol. 85(2): 91--105The Drosophila melanogaster LEM-domain protein MAN1. [FBrf0190401] Supplementary material Graveley et al., 2011, Nature 471(7339): Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980] The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Personal communication to FlyBase Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi CenterRNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510] Mintseris et al., 2009.11.23, DPiM: the Drosophila Protein Interaction Mapping projectDPiM: the Drosophila Protein Interaction Mapping project [FBrf0209452] Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi CenterRNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms.Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215] Ryder, 2004.4.26, Exelixis CG deletion data.Exelixis CG deletion data. [FBrf0184335] Gene Disruption Project members, 2001-, (Computer file)(Computer file) [FBrf0132177] BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file)Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078] Abstract Pinto et al., 2008, A. Dros. Res. Conf. 49: 538ATissue-specific contributions of the Drosophila LEM domain protein dMAN1 in the nuclear lamina. [FBrf0203743] Wilmington et al., 2008, A. Dros. Res. Conf. 49: 540CGenetic analyses of bocksbeutel and otefin: genes encoding nuclear lamina LEM domain proteins. [FBrf0203739] Pinto et al., 2007, A. Dros. Res. Conf. 48: 136Using Drosophila as a model to understand human laminopathies: a study of dMAN1. [FBrf0198540] Pinto et al., 2006, A. Dros. Res. Conf. 47: 833AA Study of the LEM domain proteins in Drosophila: Characterization of the putative MAN1 Homologue. [FBrf0188987] FlyBase analysis FlyBase, 1996-, FlyBase inference based on genome sequence analysis.FlyBase inference based on genome sequence analysis. [FBrf0104946] Stock list Japanese National Institute of Genetics, 2012.5.21, RNAi stocks available from NIG-FLY.RNAi stocks available from NIG-FLY. [FBrf0218457] Website Fisher et al., 2012, BDGP insitu homepageBDGP insitu homepage [FBrf0219073]