A Database of Drosophila Genes & Genomes

FB2013_03, released May 7th, 2013
 

Gene Dmel\MAN1

General Information
SymbolDmel\MAN1SpeciesD. melanogaster
NameMAN1Annotation symbolCG3167
Feature typeprotein_coding_geneFlyBase IDFBgn0034962
Gene Model StatusCurrent Stock availability 3 publicly available
Also Known AsdMAN1
Genomic Location
Chromosome (arm)2RRecombination map
Cytogenetic map60B5-60B5Sequence location2R:19,921,732..19,924,231 [+]

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Automatically generated summary

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The gene MAN1 is referred to in FlyBase by the symbol Dmel\MAN1 (CG3167, FBgn0034962). It is a protein_coding_gene from Drosophila melanogaster. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process: negative regulation of BMP signaling pathway. 14 alleles are reported. The phenotypes of these alleles are annotated with: posterior crossvein; ovary; anterior crossvein; wing vein L4; testis; wing blade; wing; wing vein. It has 2 annotated transcripts and 2 annotated polypeptides. Protein features are: Inner nuclear membrane protein MAN1; LEM domain; LEM/LEM-like domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, in adult female stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult male reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1631696_s_at completely aligns to an exonic region common to each of the 2 FlyBase-annotated transcript isoforms of MAN1. Gene sequence location is 2R:19921732..19924231.

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Description
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FB2013_03
FB2013_02
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FlyBase Computed Cytological Location
Cytogenetic map
Evidence for location
60B5-60B5  
Limits computationally determined from genome sequence between P{lacW}Phmk07623&P{lacW}tsrk05633 and P{EP}EP503  
Experimentally Determined Cytological Location
Cytogenetic map
Notes
References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
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Please see the GBrowse view of Dmel\MAN1 for information on other features GBrowse View Help
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detailed view FBtr0072192 FBtr0072191 FBtr0072166 FBtr0072167 FBtr0072189 FBtr0072190 FBtr0072168 FBpp0072100 FBpp0072101 FBpp0072076 FBpp0072075 FBpp0072098 FBpp0072099 FBpp0072077 FBti0003652 FBti0054876 FBti0110437 FBti0065453 FBti0039279 FBti0113435 FBti0108153 FBti0021211 FBti0112866 FBti0023543 FBti0125414 FBti0059068 FBti0126524
Comments on Gene Model
DGC clone appears problematic (LD24895): incomplete CDS.
hide Transcript Data
Annotated Transcripts
Name
FlyBase ID
RefSeq ID
Length (nt)
Associated CDS (aa)
FBtr0072166
  2245
  650
FBtr0072167
  2233
  650
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
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Annotated Polypeptides
Name
FlyBase ID
Predicted MW (kDa)
Length (aa)
Theoretical pI
RefSeq ID
GenBank protein
FBpp0072075  
73.9  
650  
9.68  
FBpp0072076  
73.9  
650  
9.68  
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
hide Sequences Consistent with the Gene Model
DDBJ /
EMBL /
GenBank
DNA sequence
Protein sequence
Name
 
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL
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Mapped Features have been reorganized, please see this article for details.
Additional mapped features and mutations can be found on GBrowse or related reports.
Type
Symbol & Location
Additional Notes
References
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Linkouts
Crossreferences
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hideTranscript Expression
in situ
Stage
Tissue/Position (including subcellular localization)
Reference
Comment:maternally deposited
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
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Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term
References
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Associated Tools
Reference
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
hide FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)


   Styles
   Scales

Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: adult ovary. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, larval/adult central nervous system, adult crop, adult Malpighian tubules, adult heart, larval/adult fat body, larval/adult salivary gland, larval trachea, adult spermathecae, adult male reproductive system, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
 
No expression (0 - 9.999)
 
Low expression (10 - 99.999)
 
Moderate expression (100 - 499.999)
 
High level expression (500 - 999.999)
 
Very high expression (>999.999)

Linear, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 183.675
Larval Midgut
 
 62.8
Larval Hindgut
 
 87.4
Larval Malpighian Tubules
 
 78.7
Larval Fat Body
 
 170.3
Larval Salivary Gland
 
 168.7
Larval Trachea
 
 168.1
Larval Carcass
 
 113.225
Adult Head
 
 117.1
Adult Eye
 
 98.3
Adult Brain
 
 175.9
Adult Thoracic-Abdominal Ganglion
 
 156.5
Adult Crop
 
 162.9
Adult Midgut
 
 87.7
Adult Hindgut
 
 86.4
Adult Malpighian Tubules
 
 187.3
Adult Fat Body
 
 129.8
Adult Salivary Gland
 
 106.3
Adult Heart
 
 105.9
Adult VirginFemale Spermatheca
 
 129
Adult InseminatedFemale Spermatheca
 
 145.9
Adult Ovary
 
 658.5
Adult Testis
 
 448.3
Adult Male Accessory Gland
 
 137.7
Adult Carcass
 
 142.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 183.675
Larval Midgut
 
 62.8
Larval Hindgut
 
 87.4
Larval Malpighian Tubules
 
 78.7
Larval Fat Body
 
 170.3
Larval Salivary Gland
 
 168.7
Larval Trachea
 
 168.1
Larval Carcass
 
 113.225
Adult Head
 
 117.1
Adult Eye
 
 98.3
Adult Brain
 
 175.9
Adult Thoracic-Abdominal Ganglion
 
 156.5
Adult Crop
 
 162.9
Adult Midgut
 
 87.7
Adult Hindgut
 
 86.4
Adult Malpighian Tubules
 
 187.3
Adult Fat Body
 
 129.8
Adult Salivary Gland
 
 106.3
Adult Heart
 
 105.9
Adult VirginFemale Spermatheca
 
 129
Adult InseminatedFemale Spermatheca
 
 145.9
Adult Ovary
 (658.5)
Adult Testis
 
 448.3
Adult Male Accessory Gland
 
 137.7
Adult Carcass
 
 142.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
Linear, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 183.675
Larval Midgut
 
 62.8
Larval Hindgut
 
 87.4
Larval Malpighian Tubules
 
 78.7
Larval Fat Body
 
 170.3
Larval Salivary Gland
 
 168.7
Larval Trachea
 
 168.1
Larval Carcass
 
 113.225
Adult Head
 
 117.1
Adult Eye
 
 98.3
Adult Brain
 
 175.9
Adult Thoracic-Abdominal Ganglion
 
 156.5
Adult Crop
 
 162.9
Adult Midgut
 
 87.7
Adult Hindgut
 
 86.4
Adult Malpighian Tubules
 
 187.3
Adult Fat Body
 
 129.8
Adult Salivary Gland
 
 106.3
Adult Heart
 
 105.9
Adult VirginFemale Spermatheca
 
 129
Adult InseminatedFemale Spermatheca
 
 145.9
Adult Ovary
 
 658.5
Adult Testis
 
 448.3
Adult Male Accessory Gland
 
 137.7
Adult Carcass
 
 142.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Linear, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 183.675
Larval Midgut
 
 62.8
Larval Hindgut
 
 87.4
Larval Malpighian Tubules
 
 78.7
Larval Fat Body
 
 170.3
Larval Salivary Gland
 
 168.7
Larval Trachea
 
 168.1
Larval Carcass
 
 113.225
Adult Head
 
 117.1
Adult Eye
 
 98.3
Adult Brain
 
 175.9
Adult Thoracic-Abdominal Ganglion
 
 156.5
Adult Crop
 
 162.9
Adult Midgut
 
 87.7
Adult Hindgut
 
 86.4
Adult Malpighian Tubules
 
 187.3
Adult Fat Body
 
 129.8
Adult Salivary Gland
 
 106.3
Adult Heart
 
 105.9
Adult VirginFemale Spermatheca
 
 129
Adult InseminatedFemale Spermatheca
 
 145.9
Adult Ovary
 
 658.5
Adult Testis
 
 448.3
Adult Male Accessory Gland
 
 137.7
Adult Carcass
 
 142.5
Expression Level Scale
 Very high 
log, scaled to maximum expression level
Tissue   Expression Level
Larval Central Nervous System
 
 183.675
Larval Midgut
 
 62.8
Larval Hindgut
 
 87.4
Larval Malpighian Tubules
 
 78.7
Larval Fat Body
 
 170.3
Larval Salivary Gland
 
 168.7
Larval Trachea
 
 168.1
Larval Carcass
 
 113.225
Adult Head
 
 117.1
Adult Eye
 
 98.3
Adult Brain
 
 175.9
Adult Thoracic-Abdominal Ganglion
 
 156.5
Adult Crop
 
 162.9
Adult Midgut
 
 87.7
Adult Hindgut
 
 86.4
Adult Malpighian Tubules
 
 187.3
Adult Fat Body
 
 129.8
Adult Salivary Gland
 
 106.3
Adult Heart
 
 105.9
Adult VirginFemale Spermatheca
 
 129
Adult InseminatedFemale Spermatheca
 
 145.9
Adult Ovary
 
 658.5
Adult Testis
 
 448.3
Adult Male Accessory Gland
 
 137.7
Adult Carcass
 
 142.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
Larval Central Nervous System
 
 183.675
Larval Midgut
 
 62.8
Larval Hindgut
 
 87.4
Larval Malpighian Tubules
 
 78.7
Larval Fat Body
 
 170.3
Larval Salivary Gland
 
 168.7
Larval Trachea
 
 168.1
Larval Carcass
 
 113.225
Adult Head
 
 117.1
Adult Eye
 
 98.3
Adult Brain
 
 175.9
Adult Thoracic-Abdominal Ganglion
 
 156.5
Adult Crop
 
 162.9
Adult Midgut
 
 87.7
Adult Hindgut
 
 86.4
Adult Malpighian Tubules
 
 187.3
Adult Fat Body
 
 129.8
Adult Salivary Gland
 
 106.3
Adult Heart
 
 105.9
Adult VirginFemale Spermatheca
 
 129
Adult InseminatedFemale Spermatheca
 
 145.9
Adult Ovary
 658.5
Adult Testis
 
 448.3
Adult Male Accessory Gland
 
 137.7
Adult Carcass
 
 142.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
log, scaled to High level expression
Tissue   Expression Level
Larval Central Nervous System
 
 183.675
Larval Midgut
 
 62.8
Larval Hindgut
 
 87.4
Larval Malpighian Tubules
 
 78.7
Larval Fat Body
 
 170.3
Larval Salivary Gland
 
 168.7
Larval Trachea
 
 168.1
Larval Carcass
 
 113.225
Adult Head
 
 117.1
Adult Eye
 
 98.3
Adult Brain
 
 175.9
Adult Thoracic-Abdominal Ganglion
 
 156.5
Adult Crop
 
 162.9
Adult Midgut
 
 87.7
Adult Hindgut
 
 86.4
Adult Malpighian Tubules
 
 187.3
Adult Fat Body
 
 129.8
Adult Salivary Gland
 
 106.3
Adult Heart
 
 105.9
Adult VirginFemale Spermatheca
 
 129
Adult InseminatedFemale Spermatheca
 
 145.9
Adult Ovary
 
 658.5
Adult Testis
 
 448.3
Adult Male Accessory Gland
 
 137.7
Adult Carcass
 
 142.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
log, scaled to Very high expression
Tissue   Expression Level
Larval Central Nervous System
 
 183.675
Larval Midgut
 
 62.8
Larval Hindgut
 
 87.4
Larval Malpighian Tubules
 
 78.7
Larval Fat Body
 
 170.3
Larval Salivary Gland
 
 168.7
Larval Trachea
 
 168.1
Larval Carcass
 
 113.225
Adult Head
 
 117.1
Adult Eye
 
 98.3
Adult Brain
 
 175.9
Adult Thoracic-Abdominal Ganglion
 
 156.5
Adult Crop
 
 162.9
Adult Midgut
 
 87.7
Adult Hindgut
 
 86.4
Adult Malpighian Tubules
 
 187.3
Adult Fat Body
 
 129.8
Adult Salivary Gland
 
 106.3
Adult Heart
 
 105.9
Adult VirginFemale Spermatheca
 
 129
Adult InseminatedFemale Spermatheca
 
 145.9
Adult Ovary
 
 658.5
Adult Testis
 
 448.3
Adult Male Accessory Gland
 
 137.7
Adult Carcass
 
 142.5
Expression Level Scale
 None 
 Low 
 Moderate 
 High 
 Very high 
Heatmap
Tissue   Expression Level
Larval Central Nervous System
 
 
Larval Midgut
 
 
Larval Hindgut
 
 
Larval Malpighian Tubules
 
 
Larval Fat Body
 
 
Larval Salivary Gland
 
 
Larval Trachea
 
 
Larval Carcass
 
 
Adult Head
 
 
Adult Eye
 
 
Adult Brain
 
 
Adult Thoracic-Abdominal Ganglion
 
 
Adult Crop
 
 
Adult Midgut
 
 
Adult Hindgut
 
 
Adult Malpighian Tubules
 
 
Adult Fat Body
 
 
Adult Salivary Gland
 
 
Adult Heart
 
 
Adult VirginFemale Spermatheca
 
 
Adult InseminatedFemale Spermatheca
 
 
Adult Ovary
 
 
Adult Testis
 
 
Adult Male Accessory Gland
 
 
Adult Carcass
 
 

FlyAtlas Organ/Tissue Expression, larval vs. adult
Larval Expression Level Tissue Adult Expression Level
 
NA 
Head
 
 117.1
 
NA 
Eye
 
 98.3
 
NA 
Brain
 
 175.9
 
183.675 
Central Nervous System
 
 NA
 
NA 
Thoracic-Abdominal Ganglion
 
 156.5
 
NA 
Crop
 
 162.9
 
62.8 
Midgut
 
 87.7
 
87.4 
Hindgut
 
 86.4
 
78.7 
Malpighian Tubules
 
 187.3
 
170.3 
Fat Body
 
 129.8
 
168.7 
Salivary Gland
 
 106.3
 
NA 
Heart
 
 105.9
 
168.1 
Trachea
 
 NA
 
NA 
VirginFemale Spermatheca
 
 129
 
NA 
InseminatedFemale Spermatheca
 
 145.9
 
NA 
Ovary
 
 658.5
 
NA 
Testis
 
 448.3
 
NA 
Male Accessory Gland
 
 137.7
 
113.225 
Carcass
 
 142.5

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
hide modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 11
head, virgin 1-day female
 
 6
head, virgin 4-day female
 
 5
head, virgin 20-day female
 
 7
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 7
head, mated 1-day male
 
 7
head, mated 4-day male
 
 10
head, mated 20-day male
 
 11
salivary gland, larvae L3 wandering
 
 1
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 8
digestive system, 1-day adult
 
 6
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 5
fat body, white prepupae
 
 14
fat body, pupae P8
 
 10
carcass, larvae L3 wandering
 
 13
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 11
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 80
ovary, mated 4-day female
 
 63
testis, mated 4-day male
 
 62
accessory gland, mated 4-day male
 
 10
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 (42)
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 11
head, virgin 1-day female
 
 6
head, virgin 4-day female
 
 5
head, virgin 20-day female
 
 7
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 7
head, mated 1-day male
 
 7
head, mated 4-day male
 
 10
head, mated 20-day male
 
 11
salivary gland, larvae L3 wandering
 
 1
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 8
digestive system, 1-day adult
 
 6
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 5
fat body, white prepupae
 
 14
fat body, pupae P8
 
 10
carcass, larvae L3 wandering
 
 13
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 11
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 (80)
ovary, mated 4-day female
 (63)
testis, mated 4-day male
 (62)
accessory gland, mated 4-day male
 
 10
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 11
head, virgin 1-day female
 
 6
head, virgin 4-day female
 
 5
head, virgin 20-day female
 
 7
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 7
head, mated 1-day male
 
 7
head, mated 4-day male
 
 10
head, mated 20-day male
 
 11
salivary gland, larvae L3 wandering
 
 1
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 8
digestive system, 1-day adult
 
 6
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 5
fat body, white prepupae
 
 14
fat body, pupae P8
 
 10
carcass, larvae L3 wandering
 
 13
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 11
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 80
ovary, mated 4-day female
 
 63
testis, mated 4-day male
 
 62
accessory gland, mated 4-day male
 
 10
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 11
head, virgin 1-day female
 
 6
head, virgin 4-day female
 
 5
head, virgin 20-day female
 
 7
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 7
head, mated 1-day male
 
 7
head, mated 4-day male
 
 10
head, mated 20-day male
 
 11
salivary gland, larvae L3 wandering
 
 1
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 8
digestive system, 1-day adult
 
 6
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 5
fat body, white prepupae
 
 14
fat body, pupae P8
 
 10
carcass, larvae L3 wandering
 
 13
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 11
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 80
ovary, mated 4-day female
 
 63
testis, mated 4-day male
 
 62
accessory gland, mated 4-day male
 
 10
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 11
head, virgin 1-day female
 
 6
head, virgin 4-day female
 
 5
head, virgin 20-day female
 
 7
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 7
head, mated 1-day male
 
 7
head, mated 4-day male
 
 10
head, mated 20-day male
 
 11
salivary gland, larvae L3 wandering
 
 1
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 8
digestive system, 1-day adult
 
 6
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 5
fat body, white prepupae
 
 14
fat body, pupae P8
 
 10
carcass, larvae L3 wandering
 
 13
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 11
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 80
ovary, mated 4-day female
 
 63
testis, mated 4-day male
 
 62
accessory gland, mated 4-day male
 
 10
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 (42)
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 11
head, virgin 1-day female
 
 6
head, virgin 4-day female
 
 5
head, virgin 20-day female
 
 7
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 7
head, mated 1-day male
 
 7
head, mated 4-day male
 
 10
head, mated 20-day male
 
 11
salivary gland, larvae L3 wandering
 
 1
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 8
digestive system, 1-day adult
 
 6
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 5
fat body, white prepupae
 
 14
fat body, pupae P8
 
 10
carcass, larvae L3 wandering
 
 13
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 11
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 (80)
ovary, mated 4-day female
 (63)
testis, mated 4-day male
 (62)
accessory gland, mated 4-day male
 
 10
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 11
head, virgin 1-day female
 
 6
head, virgin 4-day female
 
 5
head, virgin 20-day female
 
 7
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 7
head, mated 1-day male
 
 7
head, mated 4-day male
 
 10
head, mated 20-day male
 
 11
salivary gland, larvae L3 wandering
 
 1
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 8
digestive system, 1-day adult
 
 6
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 5
fat body, white prepupae
 
 14
fat body, pupae P8
 
 10
carcass, larvae L3 wandering
 
 13
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 11
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 80
ovary, mated 4-day female
 
 63
testis, mated 4-day male
 
 62
accessory gland, mated 4-day male
 
 10
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 42
central nervous system, larvae L3
 
 13
central nervous system, pupae P8
 
 11
head, virgin 1-day female
 
 6
head, virgin 4-day female
 
 5
head, virgin 20-day female
 
 7
head, mated 1-day female
 
 8
head, mated 4-day female
 
 7
head, mated 20-day female
 
 7
head, mated 1-day male
 
 7
head, mated 4-day male
 
 10
head, mated 20-day male
 
 11
salivary gland, larvae L3 wandering
 
 1
salivary gland, white prepupae
 
 2
digestive system, larvae L3 wandering
 
 8
digestive system, 1-day adult
 
 6
digestive system, 4-day adult
 
 10
digestive system, 20-day adult
 
 7
fat body, larvae L3 wandering
 
 5
fat body, white prepupae
 
 14
fat body, pupae P8
 
 10
carcass, larvae L3 wandering
 
 13
carcass, 1-day adult
 
 7
carcass, 4-day adult
 
 11
carcass, 20-day adult
 
 9
ovary, virgin 4-day female
 
 80
ovary, mated 4-day female
 
 63
testis, mated 4-day male
 
 62
accessory gland, mated 4-day male
 
 10
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Tissue   Expression Level
imaginal disc, larvae L3 wandering
 
 
central nervous system, larvae L3
 
 
central nervous system, pupae P8
 
 
head, virgin 1-day female
 
 
head, virgin 4-day female
 
 
head, virgin 20-day female
 
 
head, mated 1-day female
 
 
head, mated 4-day female
 
 
head, mated 20-day female
 
 
head, mated 1-day male
 
 
head, mated 4-day male
 
 
head, mated 20-day male
 
 
salivary gland, larvae L3 wandering
 
 
salivary gland, white prepupae
 
 
digestive system, larvae L3 wandering
 
 
digestive system, 1-day adult
 
 
digestive system, 4-day adult
 
 
digestive system, 20-day adult
 
 
fat body, larvae L3 wandering
 
 
fat body, white prepupae
 
 
fat body, pupae P8
 
 
carcass, larvae L3 wandering
 
 
carcass, 1-day adult
 
 
carcass, 4-day adult
 
 
carcass, 20-day adult
 
 
ovary, virgin 4-day female
 
 
ovary, mated 4-day female
 
 
testis, mated 4-day male
 
 
accessory gland, mated 4-day male
 
 

hide modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)


   Styles
   Scales

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, in adult female stages.
[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 89
embryo 02-04hr
 
 78
embryo 04-06hr
 
 40
embryo 06-08hr
 
 40
embryo 08-10hr
 
 45
embryo 10-12hr
 
 38
embryo 12-14hr
 
 33
embryo 14-16hr
 
 28
embryo 16-18hr
 
 25
embryo 18-20hr
 
 13
embryo 20-22hr
 
 27
embryo 22-24hr
 
 31
larva L1
 
 7
larva L2
 
 8
larva L3 12hr old
 
 7
larva L3 puffstage 1-2
 
 10
larva L3 puffstage 3-6
 
 14
larva L3 puffstage 7-9
 
 18
white prepupae new
 
 17
white prepupae 12hr
 
 19
white prepupae 24hr
 
 26
pupae 2d postWPP
 
 25
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 14
adult male 01day
 
 20
adult male 05day
 
 28
adult male 30day
 
 24
adult female 01day
 
 30
adult female 05day
 
 64
adult female 30day
 
 63
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
Linear, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (89)
embryo 02-04hr
 (78)
embryo 04-06hr
 (40)
embryo 06-08hr
 (40)
embryo 08-10hr
 (45)
embryo 10-12hr
 (38)
embryo 12-14hr
 (33)
embryo 14-16hr
 (28)
embryo 16-18hr
 
 25
embryo 18-20hr
 
 13
embryo 20-22hr
 (27)
embryo 22-24hr
 (31)
larva L1
 
 7
larva L2
 
 8
larva L3 12hr old
 
 7
larva L3 puffstage 1-2
 
 10
larva L3 puffstage 3-6
 
 14
larva L3 puffstage 7-9
 
 18
white prepupae new
 
 17
white prepupae 12hr
 
 19
white prepupae 24hr
 26
pupae 2d postWPP
 
 25
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 14
adult male 01day
 
 20
adult male 05day
 (28)
adult male 30day
 
 24
adult female 01day
 (30)
adult female 05day
 (64)
adult female 30day
 (63)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 89
embryo 02-04hr
 
 78
embryo 04-06hr
 
 40
embryo 06-08hr
 
 40
embryo 08-10hr
 
 45
embryo 10-12hr
 
 38
embryo 12-14hr
 
 33
embryo 14-16hr
 
 28
embryo 16-18hr
 
 25
embryo 18-20hr
 
 13
embryo 20-22hr
 
 27
embryo 22-24hr
 
 31
larva L1
 
 7
larva L2
 
 8
larva L3 12hr old
 
 7
larva L3 puffstage 1-2
 
 10
larva L3 puffstage 3-6
 
 14
larva L3 puffstage 7-9
 
 18
white prepupae new
 
 17
white prepupae 12hr
 
 19
white prepupae 24hr
 
 26
pupae 2d postWPP
 
 25
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 14
adult male 01day
 
 20
adult male 05day
 
 28
adult male 30day
 
 24
adult female 01day
 
 30
adult female 05day
 
 64
adult female 30day
 
 63
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 89
embryo 02-04hr
 
 78
embryo 04-06hr
 
 40
embryo 06-08hr
 
 40
embryo 08-10hr
 
 45
embryo 10-12hr
 
 38
embryo 12-14hr
 
 33
embryo 14-16hr
 
 28
embryo 16-18hr
 
 25
embryo 18-20hr
 
 13
embryo 20-22hr
 
 27
embryo 22-24hr
 
 31
larva L1
 
 7
larva L2
 
 8
larva L3 12hr old
 
 7
larva L3 puffstage 1-2
 
 10
larva L3 puffstage 3-6
 
 14
larva L3 puffstage 7-9
 
 18
white prepupae new
 
 17
white prepupae 12hr
 
 19
white prepupae 24hr
 
 26
pupae 2d postWPP
 
 25
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 14
adult male 01day
 
 20
adult male 05day
 
 28
adult male 30day
 
 24
adult female 01day
 
 30
adult female 05day
 
 64
adult female 30day
 
 63
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Developmental Stage   Expression Level
embryo 00-02hr
 
 89
embryo 02-04hr
 
 78
embryo 04-06hr
 
 40
embryo 06-08hr
 
 40
embryo 08-10hr
 
 45
embryo 10-12hr
 
 38
embryo 12-14hr
 
 33
embryo 14-16hr
 
 28
embryo 16-18hr
 
 25
embryo 18-20hr
 
 13
embryo 20-22hr
 
 27
embryo 22-24hr
 
 31
larva L1
 
 7
larva L2
 
 8
larva L3 12hr old
 
 7
larva L3 puffstage 1-2
 
 10
larva L3 puffstage 3-6
 
 14
larva L3 puffstage 7-9
 
 18
white prepupae new
 
 17
white prepupae 12hr
 
 19
white prepupae 24hr
 
 26
pupae 2d postWPP
 
 25
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 14
adult male 01day
 
 20
adult male 05day
 
 28
adult male 30day
 
 24
adult female 01day
 
 30
adult female 05day
 
 64
adult female 30day
 
 63
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Moderate expression
Developmental Stage   Expression Level
embryo 00-02hr
 (89)
embryo 02-04hr
 (78)
embryo 04-06hr
 (40)
embryo 06-08hr
 (40)
embryo 08-10hr
 (45)
embryo 10-12hr
 (38)
embryo 12-14hr
 (33)
embryo 14-16hr
 28
embryo 16-18hr
 
 25
embryo 18-20hr
 
 13
embryo 20-22hr
 27
embryo 22-24hr
 31
larva L1
 
 7
larva L2
 
 8
larva L3 12hr old
 
 7
larva L3 puffstage 1-2
 
 10
larva L3 puffstage 3-6
 
 14
larva L3 puffstage 7-9
 
 18
white prepupae new
 
 17
white prepupae 12hr
 
 19
white prepupae 24hr
 26
pupae 2d postWPP
 
 25
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 14
adult male 01day
 
 20
adult male 05day
 28
adult male 30day
 
 24
adult female 01day
 30
adult female 05day
 (64)
adult female 30day
 (63)
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 89
embryo 02-04hr
 
 78
embryo 04-06hr
 
 40
embryo 06-08hr
 
 40
embryo 08-10hr
 
 45
embryo 10-12hr
 
 38
embryo 12-14hr
 
 33
embryo 14-16hr
 
 28
embryo 16-18hr
 
 25
embryo 18-20hr
 
 13
embryo 20-22hr
 
 27
embryo 22-24hr
 
 31
larva L1
 
 7
larva L2
 
 8
larva L3 12hr old
 
 7
larva L3 puffstage 1-2
 
 10
larva L3 puffstage 3-6
 
 14
larva L3 puffstage 7-9
 
 18
white prepupae new
 
 17
white prepupae 12hr
 
 19
white prepupae 24hr
 
 26
pupae 2d postWPP
 
 25
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 14
adult male 01day
 
 20
adult male 05day
 
 28
adult male 30day
 
 24
adult female 01day
 
 30
adult female 05day
 
 64
adult female 30day
 
 63
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Developmental Stage   Expression Level
embryo 00-02hr
 
 89
embryo 02-04hr
 
 78
embryo 04-06hr
 
 40
embryo 06-08hr
 
 40
embryo 08-10hr
 
 45
embryo 10-12hr
 
 38
embryo 12-14hr
 
 33
embryo 14-16hr
 
 28
embryo 16-18hr
 
 25
embryo 18-20hr
 
 13
embryo 20-22hr
 
 27
embryo 22-24hr
 
 31
larva L1
 
 7
larva L2
 
 8
larva L3 12hr old
 
 7
larva L3 puffstage 1-2
 
 10
larva L3 puffstage 3-6
 
 14
larva L3 puffstage 7-9
 
 18
white prepupae new
 
 17
white prepupae 12hr
 
 19
white prepupae 24hr
 
 26
pupae 2d postWPP
 
 25
pupae 3d postWPP
 
 18
pupae 4d postWPP
 
 14
adult male 01day
 
 20
adult male 05day
 
 28
adult male 30day
 
 24
adult female 01day
 
 30
adult female 05day
 
 64
adult female 30day
 
 63
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Developmental Stage   Expression Level
embryo 00-02hr
 
 
embryo 02-04hr
 
 
embryo 04-06hr
 
 
embryo 06-08hr
 
 
embryo 08-10hr
 
 
embryo 10-12hr
 
 
embryo 12-14hr
 
 
embryo 14-16hr
 
 
embryo 16-18hr
 
 
embryo 18-20hr
 
 
embryo 20-22hr
 
 
embryo 22-24hr
 
 
larva L1
 
 
larva L2
 
 
larva L3 12hr old
 
 
larva L3 puffstage 1-2
 
 
larva L3 puffstage 3-6
 
 
larva L3 puffstage 7-9
 
 
white prepupae new
 
 
white prepupae 12hr
 
 
white prepupae 24hr
 
 
pupae 2d postWPP
 
 
pupae 3d postWPP
 
 
pupae 4d postWPP
 
 
adult male 01day
 
 
adult male 05day
 
 
adult male 30day
 
 
adult female 01day
 
 
adult female 05day
 
 
adult female 30day
 
 

modENCODE Temporal Expression Data (Graveley et al., 2011)
hide modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 35
Schneider line 2 Sg4
 
 18
embryonic 1182-4H
 
 15
embryonic GM2
 
 13
embryonic Kc167
 
 18
embryonic S1
 
 26
embryonic S3
 
 15
leg disc CME L1
 
 20
wing disc CME-W2
 
 21
wing disc ML-DmD8
 
 16
wing disc ML-DmD9
 
 13
wing disc ML-DmD16-c3
 
 23
wing disc ML-DmD21
 
 9
wing disc ML-DmD32
 
 13
haltere disc ML-DmD17-c3
 
 35
eye-antennal disc ML-DmD11
 
 15
antennal disc ML-DmD20-c5
 
 19
mixed discs ML-DmD4-c1
 
 20
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 25
tumorous blood cells mbn2
 
 14
ovary fGS/OSS
 
 20
ovary OSC
 
 28
ovary OSS
 
 14
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 (35)
Schneider line 2 Sg4
 
 18
embryonic 1182-4H
 
 15
embryonic GM2
 
 13
embryonic Kc167
 
 18
embryonic S1
 26
embryonic S3
 
 15
leg disc CME L1
 
 20
wing disc CME-W2
 
 21
wing disc ML-DmD8
 
 16
wing disc ML-DmD9
 
 13
wing disc ML-DmD16-c3
 
 23
wing disc ML-DmD21
 
 9
wing disc ML-DmD32
 
 13
haltere disc ML-DmD17-c3
 (35)
eye-antennal disc ML-DmD11
 
 15
antennal disc ML-DmD20-c5
 
 19
mixed discs ML-DmD4-c1
 
 20
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 25
tumorous blood cells mbn2
 
 14
ovary fGS/OSS
 
 20
ovary OSC
 (28)
ovary OSS
 
 14
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 35
Schneider line 2 Sg4
 
 18
embryonic 1182-4H
 
 15
embryonic GM2
 
 13
embryonic Kc167
 
 18
embryonic S1
 
 26
embryonic S3
 
 15
leg disc CME L1
 
 20
wing disc CME-W2
 
 21
wing disc ML-DmD8
 
 16
wing disc ML-DmD9
 
 13
wing disc ML-DmD16-c3
 
 23
wing disc ML-DmD21
 
 9
wing disc ML-DmD32
 
 13
haltere disc ML-DmD17-c3
 
 35
eye-antennal disc ML-DmD11
 
 15
antennal disc ML-DmD20-c5
 
 19
mixed discs ML-DmD4-c1
 
 20
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 25
tumorous blood cells mbn2
 
 14
ovary fGS/OSS
 
 20
ovary OSC
 
 28
ovary OSS
 
 14
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 35
Schneider line 2 Sg4
 
 18
embryonic 1182-4H
 
 15
embryonic GM2
 
 13
embryonic Kc167
 
 18
embryonic S1
 
 26
embryonic S3
 
 15
leg disc CME L1
 
 20
wing disc CME-W2
 
 21
wing disc ML-DmD8
 
 16
wing disc ML-DmD9
 
 13
wing disc ML-DmD16-c3
 
 23
wing disc ML-DmD21
 
 9
wing disc ML-DmD32
 
 13
haltere disc ML-DmD17-c3
 
 35
eye-antennal disc ML-DmD11
 
 15
antennal disc ML-DmD20-c5
 
 19
mixed discs ML-DmD4-c1
 
 20
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 25
tumorous blood cells mbn2
 
 14
ovary fGS/OSS
 
 20
ovary OSC
 
 28
ovary OSS
 
 14
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Cell Line   Expression Level
Schneider line 2 S2R+
 
 35
Schneider line 2 Sg4
 
 18
embryonic 1182-4H
 
 15
embryonic GM2
 
 13
embryonic Kc167
 
 18
embryonic S1
 
 26
embryonic S3
 
 15
leg disc CME L1
 
 20
wing disc CME-W2
 
 21
wing disc ML-DmD8
 
 16
wing disc ML-DmD9
 
 13
wing disc ML-DmD16-c3
 
 23
wing disc ML-DmD21
 
 9
wing disc ML-DmD32
 
 13
haltere disc ML-DmD17-c3
 
 35
eye-antennal disc ML-DmD11
 
 15
antennal disc ML-DmD20-c5
 
 19
mixed discs ML-DmD4-c1
 
 20
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 25
tumorous blood cells mbn2
 
 14
ovary fGS/OSS
 
 20
ovary OSC
 
 28
ovary OSS
 
 14
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to Moderate expression
Cell Line   Expression Level
Schneider line 2 S2R+
 (35)
Schneider line 2 Sg4
 
 18
embryonic 1182-4H
 
 15
embryonic GM2
 
 13
embryonic Kc167
 
 18
embryonic S1
 26
embryonic S3
 
 15
leg disc CME L1
 
 20
wing disc CME-W2
 
 21
wing disc ML-DmD8
 
 16
wing disc ML-DmD9
 
 13
wing disc ML-DmD16-c3
 
 23
wing disc ML-DmD21
 
 9
wing disc ML-DmD32
 
 13
haltere disc ML-DmD17-c3
 (35)
eye-antennal disc ML-DmD11
 
 15
antennal disc ML-DmD20-c5
 
 19
mixed discs ML-DmD4-c1
 
 20
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 25
tumorous blood cells mbn2
 
 14
ovary fGS/OSS
 
 20
ovary OSC
 28
ovary OSS
 
 14
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 35
Schneider line 2 Sg4
 
 18
embryonic 1182-4H
 
 15
embryonic GM2
 
 13
embryonic Kc167
 
 18
embryonic S1
 
 26
embryonic S3
 
 15
leg disc CME L1
 
 20
wing disc CME-W2
 
 21
wing disc ML-DmD8
 
 16
wing disc ML-DmD9
 
 13
wing disc ML-DmD16-c3
 
 23
wing disc ML-DmD21
 
 9
wing disc ML-DmD32
 
 13
haltere disc ML-DmD17-c3
 
 35
eye-antennal disc ML-DmD11
 
 15
antennal disc ML-DmD20-c5
 
 19
mixed discs ML-DmD4-c1
 
 20
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 25
tumorous blood cells mbn2
 
 14
ovary fGS/OSS
 
 20
ovary OSC
 
 28
ovary OSS
 
 14
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Cell Line   Expression Level
Schneider line 2 S2R+
 
 35
Schneider line 2 Sg4
 
 18
embryonic 1182-4H
 
 15
embryonic GM2
 
 13
embryonic Kc167
 
 18
embryonic S1
 
 26
embryonic S3
 
 15
leg disc CME L1
 
 20
wing disc CME-W2
 
 21
wing disc ML-DmD8
 
 16
wing disc ML-DmD9
 
 13
wing disc ML-DmD16-c3
 
 23
wing disc ML-DmD21
 
 9
wing disc ML-DmD32
 
 13
haltere disc ML-DmD17-c3
 
 35
eye-antennal disc ML-DmD11
 
 15
antennal disc ML-DmD20-c5
 
 19
mixed discs ML-DmD4-c1
 
 20
CNS ML-DmBG1-c1
 
 24
CNS ML-DmBG2-c2
 
 25
tumorous blood cells mbn2
 
 14
ovary fGS/OSS
 
 20
ovary OSC
 
 28
ovary OSS
 
 14
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Cell Line   Expression Level
Schneider line 2 S2R+
 
 
Schneider line 2 Sg4
 
 
embryonic 1182-4H
 
 
embryonic GM2
 
 
embryonic Kc167
 
 
embryonic S1
 
 
embryonic S3
 
 
leg disc CME L1
 
 
wing disc CME-W2
 
 
wing disc ML-DmD8
 
 
wing disc ML-DmD9
 
 
wing disc ML-DmD16-c3
 
 
wing disc ML-DmD21
 
 
wing disc ML-DmD32
 
 
haltere disc ML-DmD17-c3
 
 
eye-antennal disc ML-DmD11
 
 
antennal disc ML-DmD20-c5
 
 
mixed discs ML-DmD4-c1
 
 
CNS ML-DmBG1-c1
 
 
CNS ML-DmBG2-c2
 
 
tumorous blood cells mbn2
 
 
ovary fGS/OSS
 
 
ovary OSC
 
 
ovary OSS
 
 

hide modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)


   Styles
   Scales


[download data (TSV)]

Guide to modENCODE expression level colors
 
No/Extremely low expression (0 - 0)
 
Very low expression (1 - 3)
 
Low expression (4 - 10)
 
Moderate expression (11 - 25)
 
Moderately high expression (26 - 50)
 
High expression (51 - 100)
 
Very high expression (101 - 1000)
 
Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 10
cold shock, 4-day adult
 
 7
heat shock, 4-day adult
 
 24
Cadmium 50 mM 6 hrs, larvae L3
 
 6
Cadmium 50 mM 12 hrs, larvae L3
 
 9
Cadmium 50 mM 48 hrs, 4-day adult
 
 20
Cadmium 100 mM 48 hrs, 4-day adult
 
 41
Copper 0.5 mM 12 hrs, larvae L3
 
 3
Copper 15 mM 48 hrs, 4-day adult
 
 35
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 18
Ethanol 2.5% 3 hrs, larvae L3
 
 38
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 41
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 14
Paraquat 5 mM 48 hrs, 4-day adult
 
 39
Paraquat 10 mM 48 hrs, 4-day adult
 
 34
Rotenone 2 μg 12 hrs, larvae L3
 
 7
Rotenone 8 μg 12 hrs, larvae L3
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 10
cold shock, 4-day adult
 
 7
heat shock, 4-day adult
 
 24
Cadmium 50 mM 6 hrs, larvae L3
 
 6
Cadmium 50 mM 12 hrs, larvae L3
 
 9
Cadmium 50 mM 48 hrs, 4-day adult
 
 20
Cadmium 100 mM 48 hrs, 4-day adult
 (41)
Copper 0.5 mM 12 hrs, larvae L3
 
 3
Copper 15 mM 48 hrs, 4-day adult
 (35)
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 18
Ethanol 2.5% 3 hrs, larvae L3
 (38)
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 (41)
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 14
Paraquat 5 mM 48 hrs, 4-day adult
 (39)
Paraquat 10 mM 48 hrs, 4-day adult
 (34)
Rotenone 2 μg 12 hrs, larvae L3
 
 7
Rotenone 8 μg 12 hrs, larvae L3
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
Linear, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 10
cold shock, 4-day adult
 
 7
heat shock, 4-day adult
 
 24
Cadmium 50 mM 6 hrs, larvae L3
 
 6
Cadmium 50 mM 12 hrs, larvae L3
 
 9
Cadmium 50 mM 48 hrs, 4-day adult
 
 20
Cadmium 100 mM 48 hrs, 4-day adult
 
 41
Copper 0.5 mM 12 hrs, larvae L3
 
 3
Copper 15 mM 48 hrs, 4-day adult
 
 35
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 18
Ethanol 2.5% 3 hrs, larvae L3
 
 38
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 41
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 14
Paraquat 5 mM 48 hrs, 4-day adult
 
 39
Paraquat 10 mM 48 hrs, 4-day adult
 
 34
Rotenone 2 μg 12 hrs, larvae L3
 
 7
Rotenone 8 μg 12 hrs, larvae L3
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
Linear, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 10
cold shock, 4-day adult
 
 7
heat shock, 4-day adult
 
 24
Cadmium 50 mM 6 hrs, larvae L3
 
 6
Cadmium 50 mM 12 hrs, larvae L3
 
 9
Cadmium 50 mM 48 hrs, 4-day adult
 
 20
Cadmium 100 mM 48 hrs, 4-day adult
 
 41
Copper 0.5 mM 12 hrs, larvae L3
 
 3
Copper 15 mM 48 hrs, 4-day adult
 
 35
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 18
Ethanol 2.5% 3 hrs, larvae L3
 
 38
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 41
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 14
Paraquat 5 mM 48 hrs, 4-day adult
 
 39
Paraquat 10 mM 48 hrs, 4-day adult
 
 34
Rotenone 2 μg 12 hrs, larvae L3
 
 7
Rotenone 8 μg 12 hrs, larvae L3
 
 4
Expression Level Scale
 Extremely high 
log, scaled to maximum expression level
Treatment   Expression Level
extended cold, 4-day adult
 
 10
cold shock, 4-day adult
 
 7
heat shock, 4-day adult
 
 24
Cadmium 50 mM 6 hrs, larvae L3
 
 6
Cadmium 50 mM 12 hrs, larvae L3
 
 9
Cadmium 50 mM 48 hrs, 4-day adult
 
 20
Cadmium 100 mM 48 hrs, 4-day adult
 
 41
Copper 0.5 mM 12 hrs, larvae L3
 
 3
Copper 15 mM 48 hrs, 4-day adult
 
 35
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 18
Ethanol 2.5% 3 hrs, larvae L3
 
 38
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 41
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 14
Paraquat 5 mM 48 hrs, 4-day adult
 
 39
Paraquat 10 mM 48 hrs, 4-day adult
 
 34
Rotenone 2 μg 12 hrs, larvae L3
 
 7
Rotenone 8 μg 12 hrs, larvae L3
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
log, scaled to Moderate expression
Treatment   Expression Level
extended cold, 4-day adult
 
 10
cold shock, 4-day adult
 
 7
heat shock, 4-day adult
 
 24
Cadmium 50 mM 6 hrs, larvae L3
 
 6
Cadmium 50 mM 12 hrs, larvae L3
 
 9
Cadmium 50 mM 48 hrs, 4-day adult
 
 20
Cadmium 100 mM 48 hrs, 4-day adult
 (41)
Copper 0.5 mM 12 hrs, larvae L3
 
 3
Copper 15 mM 48 hrs, 4-day adult
 (35)
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 18
Ethanol 2.5% 3 hrs, larvae L3
 (38)
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 (41)
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 14
Paraquat 5 mM 48 hrs, 4-day adult
 (39)
Paraquat 10 mM 48 hrs, 4-day adult
 (34)
Rotenone 2 μg 12 hrs, larvae L3
 
 7
Rotenone 8 μg 12 hrs, larvae L3
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
log, scaled to High expression
Treatment   Expression Level
extended cold, 4-day adult
 
 10
cold shock, 4-day adult
 
 7
heat shock, 4-day adult
 
 24
Cadmium 50 mM 6 hrs, larvae L3
 
 6
Cadmium 50 mM 12 hrs, larvae L3
 
 9
Cadmium 50 mM 48 hrs, 4-day adult
 
 20
Cadmium 100 mM 48 hrs, 4-day adult
 
 41
Copper 0.5 mM 12 hrs, larvae L3
 
 3
Copper 15 mM 48 hrs, 4-day adult
 
 35
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 18
Ethanol 2.5% 3 hrs, larvae L3
 
 38
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 41
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 14
Paraquat 5 mM 48 hrs, 4-day adult
 
 39
Paraquat 10 mM 48 hrs, 4-day adult
 
 34
Rotenone 2 μg 12 hrs, larvae L3
 
 7
Rotenone 8 μg 12 hrs, larvae L3
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
log, scaled to Extremely high expression
Treatment   Expression Level
extended cold, 4-day adult
 
 10
cold shock, 4-day adult
 
 7
heat shock, 4-day adult
 
 24
Cadmium 50 mM 6 hrs, larvae L3
 
 6
Cadmium 50 mM 12 hrs, larvae L3
 
 9
Cadmium 50 mM 48 hrs, 4-day adult
 
 20
Cadmium 100 mM 48 hrs, 4-day adult
 
 41
Copper 0.5 mM 12 hrs, larvae L3
 
 3
Copper 15 mM 48 hrs, 4-day adult
 
 35
Zinc 5 mM 12 hrs, larvae L3
 
 3
Zinc 4.5 mM 48 hrs, 4-day adult
 
 18
Ethanol 2.5% 3 hrs, larvae L3
 
 38
Ethanol 5% 3 hrs, larvae L3
 
 6
Ethanol 10% 3 hrs, larvae L3
 
 7
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 6
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 41
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 14
Paraquat 5 mM 48 hrs, 4-day adult
 
 39
Paraquat 10 mM 48 hrs, 4-day adult
 
 34
Rotenone 2 μg 12 hrs, larvae L3
 
 7
Rotenone 8 μg 12 hrs, larvae L3
 
 4
Expression Level Scale
 Very low 
 Low 
 Moderate 
 Moderately high 
 High 
 Very high 
 Extremely high 
Heatmap
Treatment   Expression Level
extended cold, 4-day adult
 
 
cold shock, 4-day adult
 
 
heat shock, 4-day adult
 
 
Cadmium 50 mM 6 hrs, larvae L3
 
 
Cadmium 50 mM 12 hrs, larvae L3
 
 
Cadmium 50 mM 48 hrs, 4-day adult
 
 
Cadmium 100 mM 48 hrs, 4-day adult
 
 
Copper 0.5 mM 12 hrs, larvae L3
 
 
Copper 15 mM 48 hrs, 4-day adult
 
 
Zinc 5 mM 12 hrs, larvae L3
 
 
Zinc 4.5 mM 48 hrs, 4-day adult
 
 
Ethanol 2.5% 3 hrs, larvae L3
 
 
Ethanol 5% 3 hrs, larvae L3
 
 
Ethanol 10% 3 hrs, larvae L3
 
 
Caffeine 1.5 mg/ml 4 hrs, larvae L3
 
 
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
 
 
Caffeine 25 mg/ml 48 hrs, 4-day adult
 
 
Paraquat 5 mM 48 hrs, 4-day adult
 
 
Paraquat 10 mM 48 hrs, 4-day adult
 
 
Rotenone 2 μg 12 hrs, larvae L3
 
 
Rotenone 8 μg 12 hrs, larvae L3
 
 

hide Expression Clusters
A cluster of genes with similar mRNA expression dynamics across development.
hide External Data & Images
Linkouts
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
hide Alleles & Phenotypes
hide Summary of Allele Phenotypes
Lethality
Allele
Sterility
Allele
Other Phenotypes
Allele
Phenotype manifest in
Allele
hide Classical Alleles ( 9 )
For All Classical Alleles Show

Allele of MAN1ClassMutagenStocksKnown lesion
MAN1KG036271 --
MAN1KG063611 --
MAN1Δ1280 Yes
MAN1Δ260 Yes
MAN1Δ2960 Yes
MAN1Δ470 Yes
MAN1Δ60 Yes
MAN1Δ810 Yes
MAN1ΔC0 Yes
hide Alleles Carried on Transgenic Constructs ( 5 )
For All Alleles Carried on Transgenic Constructs Show

Allele of MAN1ClassMutagenStocksKnown lesion
MAN1GD21951 Yes
MAN1+t2.90 Yes
MAN1KK1057590 Yes
MAN1NIG.3167R0 Yes
MAN1Scer\UAS.cWa0 Yes
hide Aneuploid Aberrations
Disrupted in
Partially disrupted in
hide Transgenic Constructs & Insertions
Transgenic Constructs
Type of construct
Name
Expression data
characterization construct
Insertions
Type of insertions
Name
Expression data
hide Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )
hide Terms Based on Experimental Evidence ( 1 term )
Molecular Function ( 0 terms)
Biological Process
CV term
References
Cellular Component ( 0 terms)
hide Terms Based on Predictions or Assertions ( 1 term )
Molecular Function ( 0 terms)
Biological Process ( 0 terms)
Cellular Component
CV term
References
hide Sequence Ontology: Class of Gene
hide Interactions & Pathways
hide Summary of Physical Interactions
protein-protein
Interacting group
Assay
References
anti tag coimmunoprecipitation, peptide massfingerprinting
anti tag coimmunoprecipitation, peptide massfingerprinting
hide Summary of Genetic Interactions
Interacts with
Please look at the allele data for full details of the genetic interactions
MAN1 allele
Gene
References
hide External Data
Linkouts
DroID - A comprehensive database of gene and protein interactions.
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
hide Orthologs
hide OrthoDB Orthologs (48) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
Drosophila inclusive ortholog search
Dipteran inclusive ortholog search
Insect inclusive ortholog search
Arthropod inclusive ortholog search
Metazoa inclusive ortholog search
hideOrthologs in Drosophila Species (EOG6CZC1H)
Organism
Common Name
Gene
AAA Syntenic Ortholog
Multiple Dmel Genes in this Orthologous Group
Drosophila melanogaster
fruit fly 
 
 
Drosophila simulans
 
Y
 
Drosophila sechellia
 
Y
 
Drosophila erecta
 
Y
 
Drosophila yakuba
 
Y
 
Drosophila ananassae
 
Y
 
Drosophila pseudoobscura pseudoobscura
 
Y
 
Drosophila persimilis
 
Y
 
Drosophila willistoni
 
Y
 
Drosophila virilis
 
Y
 
Drosophila mojavensis
 
Y
 
Drosophila grimshawi
 
Y
 
hideOrthologs in non-Drosophila Dipterans (EOG6VHKFN)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Aedes aegypti
Yellow fever mosquito 
 
Anopheles gambiae
Malaria mosquito 
 
Culex quinquefasciatus
Southern house mosquito 
 
hideOrthologs in non-Dipteran Insects (EOG6XGXV8)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Apis mellifera
Western honey bee 
Amel\GB47978
 
Apis mellifera
Western honey bee 
Amel\GB44747
 
Nasonia vitripennis
Parasitic wasp 
Nvit\Nasvi2EG002725
 
Acromyrmex echinatior
Panamanian leafcutter ant 
Aech\AECH21167
 
Atta cephalotes
Leafcutter ant 
Acep\ACEP17500
 
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO13864
 
Camponotus floridanus
Florida carpenter ant 
Cflo\CFLO13865
 
Harpegnathos saltator
Jerdons jumping ant 
Hsal\HSAL20781
 
Linepithema humile
Argentine ant 
Lhum\LH12403
 
Pogonomyrmex barbatus
Red harvester ant 
Pbar\PB14480
 
Solenopsis invicta
Red fire ant 
Sinv\SINV25638
 
Acyrthosiphon pisum
Pea aphid 
 
Acyrthosiphon pisum
Pea aphid 
 
Bombyx mori
Silkmoth 
 
Pediculus humanus
Human body louse 
 
Tribolium castaneum
Red flour beetle 
 
hideOrthologs in non-Insect Arthropods (EOG6X0K7M)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Daphnia pulex
Water flea 
 
Daphnia pulex
Water flea 
 
Daphnia pulex
Water flea 
 
Ixodes scapularis
Deer tick 
 
hideOrthologs in non-Arthropod Metazoa (EOG62RS1N)
Organism
Common Name
Gene
Multiple Dmel Genes in this Orthologous Group
Caenorhabditis elegans
Nematode 
 
Strongylocentrotus purpuratus
Purple sea urchin 
 
Strongylocentrotus purpuratus
Purple sea urchin 
 
Danio rerio
Zebrafish 
 
Xenopus tropicalis
Western clawed frog 
 
Gallus gallus
Domestic chicken 
 
Gallus gallus
Domestic chicken 
 
Mus musculus
House mouse 
 
Mus musculus
House mouse 
 
Rattus norvegicus
Norway rat 
 
Rattus norvegicus
Norway rat 
 
Homo sapiens
Human 
 
Homo sapiens
Human 
 
hide Human Orthologs (2)
Gene
OMIM
HGNC
hideAAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism
Gene
Drosophila simulans
Drosophila sechellia
Drosophila erecta
Drosophila yakuba
Drosophila ananassae
Drosophila pseudoobscura pseudoobscura
Drosophila persimilis
Drosophila willistoni
Drosophila virilis
Drosophila mojavensis
Drosophila grimshawi
hide Stocks & Reagents
hide Stocks Listed in FlyBase ( 3 )
Bloomington
VDRC
hide Genomic Clones ( 1 )
Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
hide cDNA Clones ( 71 )
Please Note
This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones
Other clones
hide RNAi & Array Information
Linkouts
DRSC - Results from RNAi screens.
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
hide Antibody Information
hide Other Information
hide Discoverer
hide Etymology
hide Identification
hide Relationship to Other Genes
Source for database identity of
Source for identity of: MAN1 CG3167
Source for database merge of
Source for merge of: CG3167 BcDNA:LD24895
Additional comments
Source for merge of CG3167 BcDNA:LD24895 was a shared cDNA (date:020730).
hide Other Comments
The C-terminus of MAN1 is not required for larval muscle development or innervation.
hide External Crossreferences & Linkouts
Sequence Crossreferences
RefSeq (Transcripts)
RefSeq (Proteins)
Entrez Gene - A searchable database of RefSeq genes.
Other Crossreferences
InterPro domains - A database of protein families, domains, and functional sites
BDGP expression data - Patterns of gene expression in Drosophila embryogenesis
Linkouts
DroID - A comprehensive database of gene and protein interactions.
DRSC - Results from RNAi screens.
FLIGHT - Cell culture data for RNAi and other high-throughput technologies
FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array
FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans
GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents
InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.
modMine - Data generated by the modENCODE project.
hide Synonyms & Secondary IDs ( 4 )
Reported As
Symbol Synonym
BcDNA:LD24895
 
Name Synonym
Secondary FlyBase IDs
  • FBgn0046220
hide References ( 20 )
Research paper
Wagner et al., 2010, Dev. Biol. 339(1): 1--13
The Drosophila LEM-domain protein MAN1 antagonizes BMP signaling at the neuromuscular junction and the wing crossveins. [FBrf0210050]
Pinto et al., 2008, Genetics 180(1): 133--145
Tissue-specific defects are caused by loss of the Drosophila MAN1 LEM domain protein. [FBrf0207348]
Wagner et al., 2006, Europ. J. Cell Biol. 85(2): 91--105
The Drosophila melanogaster LEM-domain protein MAN1. [FBrf0190401]
Supplementary material
Graveley et al., 2011, Nature 471(7339):
Supplementary Table 33. Fuzzy Cluster Members. [FBrf0213980]
The modENCODE Consortium, 2010, Science 330(6012):
DataS14: Gene co-expression clusters. [FBrf0213979]
Mummery-Widmer et al., 2009, Nature 458(7241):
Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518]
Personal communication to FlyBase
Keleman et al., 2009.8.5, RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center
RNAi-phiC31 construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0208510]
Mintseris et al., 2009.11.23, DPiM: the Drosophila Protein Interaction Mapping project
DPiM: the Drosophila Protein Interaction Mapping project [FBrf0209452]
Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center
RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327]
FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms.
Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
Ryder, 2004.4.26, Exelixis CG deletion data.
Exelixis CG deletion data. [FBrf0184335]
Gene Disruption Project members, 2001-, (Computer file)
(Computer file) [FBrf0132177]
BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. (Computer file)
Berkeley Drosophila Genome Project. (Computer file) [FBrf0125078]
Abstract
Pinto et al., 2008, A. Dros. Res. Conf. 49: 538A
Tissue-specific contributions of the Drosophila LEM domain protein dMAN1 in the nuclear lamina. [FBrf0203743]
Wilmington et al., 2008, A. Dros. Res. Conf. 49: 540C
Genetic analyses of bocksbeutel and otefin: genes encoding nuclear lamina LEM domain proteins. [FBrf0203739]
Pinto et al., 2007, A. Dros. Res. Conf. 48: 136
Using Drosophila as a model to understand human laminopathies: a study of dMAN1. [FBrf0198540]
Pinto et al., 2006, A. Dros. Res. Conf. 47: 833A
A Study of the LEM domain proteins in Drosophila: Characterization of the putative MAN1 Homologue. [FBrf0188987]
FlyBase analysis
FlyBase, 1996-, FlyBase inference based on genome sequence analysis.
FlyBase inference based on genome sequence analysis. [FBrf0104946]
Stock list
Japanese National Institute of Genetics, 2012.5.21, RNAi stocks available from NIG-FLY.
RNAi stocks available from NIG-FLY. [FBrf0218457]
Website
Fisher et al., 2012, BDGP insitu homepage
BDGP insitu homepage [FBrf0219073]