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Gene Dmel\CG1275

General Information
Symbol	Dmel\CG1275	Species	D. melanogaster
Name		Annotation symbol	CG1275
Feature type	protein_coding_gene	FlyBase ID	FBgn0035321
Gene Model Status	Current	Stock availability	10 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	62D4-62D4	Sequence location	3L:2,252,744..2,257,423 [-]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents Beta	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG1275 (FBgn0035321). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: electron carrier activity. The biological processes in which it is involved are not known. 15 alleles are reported. The phenotype of these alleles is annotated with: mesothoracic tergum. It has 4 annotated transcripts and 4 annotated polypeptides. Protein features are: Cytochrome b561, eukaryote; Cytochrome b561/ferric reductase transmembrane. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed during late pupal stages. Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult central nervous system, adult crop, larval/adult Malpighian tubules, larval fat body, larval salivary gland, larval trachea, adult male reproductive system. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval central nervous system, larval/adult midgut, larval/adult hindgut, adult heart, adult fat body, adult salivary gland, adult female reproductive system, larval/adult carcass. Comments on Affy2 ProbeSet: ProbeSet 1635256_s_at completely aligns to an exonic region common to each of the 4 FlyBase-annotated transcript isoforms of CG1275. Gene sequence location is 3L:2252744..2257423.
User Contributed Data
	Beta version, feedback welcome
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2013_03
FB2013_02
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 62D4-62D4   Limits computationally determined from genome sequence between P{PZ}slsrL182 and P{PZ}Spn06911
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG1275 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
	Gene model reviewed during 5.45 Low-frequency RNA-seq exon junction(s) not annotated. Annotated transcripts do not represent all supported alternative splices within 5' UTR.
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG1275-RA FBtr0072907  NM_167942   1574   340 CG1275-RB FBtr0072905  NM_139446   1698   340 CG1275-RC FBtr0072906  NM_167941   1300   254 CG1275-RD FBtr0072908  NM_206241   1414   243
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG1275-PA   FBpp0072785   36.1   340   8.38     NP_728727   AAG22229 CG1275-PB   FBpp0072783   36.1   340   8.38     NP_647703   AAF47623 CG1275-PC   FBpp0072784   27.7   254   9.82     NP_728726   AAG22228 CG1275-PD   FBpp0072786   26.6   243   9.71     NP_995963   AAS64936
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Cytochrome b561/ferric reductase transmembrane (IPR006593) Cytochrome b561, eukaryote (IPR004877)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AA263180   AA391099   AA392916   AA539806   AA698773   AA735799   AA802272   AA802360   AA817160   AA820260   AE014296 AAF47623   AE014296 AAG22228   AE014296 AAG22229   AE014296 AAS64936   AI062493   AI064072   AI108385   AI109998   AI114355   AI386810   AI403012   AI403697   AI456634   AI512174   AI513145   AI518091   AI520129   AI542239   AI546145   AQ025069   AW943354   AX094136   AY058661 AAL13890   BF505552   BG632040   BG635730   BG636211   BG638299   BG639183   BI581207   BI593592   BI620748   BI632188   BI633535   BI636526   BI637078   BI637728   BI639546   BI639681   BI639908   BI640321   BT003297 AAO25057   CA805105   CK657231   CL526048   CO182810   CO190436   CO264532   CO265247   CO280770   CO282767   CO299213   CO300418   CO302410   CO306607   CO319670   CO324902   CO325570   CO326453   CZ468648   CZ468649   CZ472684   CZ478370   CZ479223   CZ480507   CZ480559   CZ480862   CZ487544   CZ490342   EC089908   EC200972   EC211286   EC214389   EC223847   EC239658   EC260101   EV575574   EV593101   GH942742   GH945663   GH945699   GH948543   GH949239   GH949847   GH951666   GH951734   GH952876   GH953017   GH954031   GH954248   GH956433   GH956982   GH957406   GH958212   GH958656   GH960070   GH960632   GH961112   GH961192   GH962724   GH964297   GH964333   GH964390   GH964848   GH965311   GH966711   GH967642   GH968153   GH970781   GH971392   GH971514   GH973542   GH973848   GH974275   GH974311   GH974964   GH975928   GH978171   GH980118   GH980479   GH981271   GH981305   GH983493   GH983776   GH984674
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q7KV99 Q9I7U2 Q9I7U1
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
expression microarray Stage Tissue/Position (including subcellular localization) Reference adult stage   l-LNv neuron   (Park et al., 2011) in situ Stage Tissue/Position (including subcellular localization) Reference embryonic stage 1 -- 3   organism   (Fisher et al., 2012) Comment:maternally deposited embryonic stage 4 -- 6   organism   (Fisher et al., 2012) embryonic stage 16 -- 17   embryonic/larval central nervous system   (Park et al., 2011)
Additional Descriptive Data
	CG1275 transcript is expressed at a moderate level in the CNS of late stage embryos. CG1275 transcript is also expressed in dimm-positive neurons in adults. (Park et al., 2011)
Marker for
Subcellular Localization
CV Term
Polypeptide Expression
mass spectroscopy Stage Tissue/Position (including subcellular localization) Reference day 7 of adulthood -- day 49 of adulthood   adult heart   (Cammarato et al., 2011)
Additional Descriptive Data
Marker for
Subcellular Localization (GO Cellular Component)
CV term Evidence References
Expression Deduced from Reporters
High-Throughput Expression Data
Associated Tools
Reference	See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.
FlyAtlas Anatomy Microarray
FlyAtlas Anatomical Expression Data (FlyAtlas-RNA.adult) (FlyAtlas-RNA.larva)    Styles Linear Logarithmic Heatmap Back-to-back    Scales gene max expression Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: High or moderate levels of expression observed in all larval and adult organs/tissues. Expression at high levels in the following post-embryonic organs or tissues: adult head, adult central nervous system, adult crop, larval/adult Malpighian tubules, larval fat body, larval salivary gland, larval trachea, adult male reproductive system. Expression at moderate levels in the following post-embryonic organs or tissues: adult eye, larval central nervous system, larval/adult midgut, larval/adult hindgut, adult heart, adult fat body, adult salivary gland, adult female reproductive system, larval/adult carcass. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (>999.999) Linear, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    305.925 Larval Midgut    446.5 Larval Hindgut    479.7 Larval Malpighian Tubules    1639.4 Larval Fat Body    936.7 Larval Salivary Gland    702 Larval Trachea    2176.25 Larval Carcass    453.2 Adult Head    647.5 Adult Eye    181.85 Adult Brain    1236.8 Adult Thoracic-Abdominal Ganglion    1143.8 Adult Crop    1835.9 Adult Midgut    365.9 Adult Hindgut    331.7 Adult Malpighian Tubules    1379.8 Adult Fat Body    119 Adult Salivary Gland    346.5 Adult Heart    272.275 Adult VirginFemale Spermatheca    223.1 Adult InseminatedFemale Spermatheca    266.2 Adult Ovary    476.6 Adult Testis    560.3 Adult Male Accessory Gland    1058.7 Adult Carcass    305.8 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    305.925 Larval Midgut    446.5 Larval Hindgut    479.7 Larval Malpighian Tubules  (1639.4) Larval Fat Body  (936.7) Larval Salivary Gland  (702) Larval Trachea  (2176.25) Larval Carcass    453.2 Adult Head  (647.5) Adult Eye    181.85 Adult Brain  (1236.8) Adult Thoracic-Abdominal Ganglion  (1143.8) Adult Crop  (1835.9) Adult Midgut    365.9 Adult Hindgut    331.7 Adult Malpighian Tubules  (1379.8) Adult Fat Body    119 Adult Salivary Gland    346.5 Adult Heart    272.275 Adult VirginFemale Spermatheca    223.1 Adult InseminatedFemale Spermatheca    266.2 Adult Ovary    476.6 Adult Testis  (560.3) Adult Male Accessory Gland  (1058.7) Adult Carcass    305.8 Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    305.925 Larval Midgut    446.5 Larval Hindgut    479.7 Larval Malpighian Tubules  (1639.4) Larval Fat Body    936.7 Larval Salivary Gland    702 Larval Trachea  (2176.25) Larval Carcass    453.2 Adult Head    647.5 Adult Eye    181.85 Adult Brain  (1236.8) Adult Thoracic-Abdominal Ganglion  (1143.8) Adult Crop  (1835.9) Adult Midgut    365.9 Adult Hindgut    331.7 Adult Malpighian Tubules  (1379.8) Adult Fat Body    119 Adult Salivary Gland    346.5 Adult Heart    272.275 Adult VirginFemale Spermatheca    223.1 Adult InseminatedFemale Spermatheca    266.2 Adult Ovary    476.6 Adult Testis    560.3 Adult Male Accessory Gland  1058.7 Adult Carcass    305.8 Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    305.925 Larval Midgut    446.5 Larval Hindgut    479.7 Larval Malpighian Tubules    1639.4 Larval Fat Body    936.7 Larval Salivary Gland    702 Larval Trachea    2176.25 Larval Carcass    453.2 Adult Head    647.5 Adult Eye    181.85 Adult Brain    1236.8 Adult Thoracic-Abdominal Ganglion    1143.8 Adult Crop    1835.9 Adult Midgut    365.9 Adult Hindgut    331.7 Adult Malpighian Tubules    1379.8 Adult Fat Body    119 Adult Salivary Gland    346.5 Adult Heart    272.275 Adult VirginFemale Spermatheca    223.1 Adult InseminatedFemale Spermatheca    266.2 Adult Ovary    476.6 Adult Testis    560.3 Adult Male Accessory Gland    1058.7 Adult Carcass    305.8 Expression Level Scale  Very high  log, scaled to maximum expression level Tissue   Expression Level Larval Central Nervous System    305.925 Larval Midgut    446.5 Larval Hindgut    479.7 Larval Malpighian Tubules    1639.4 Larval Fat Body    936.7 Larval Salivary Gland    702 Larval Trachea    2176.25 Larval Carcass    453.2 Adult Head    647.5 Adult Eye    181.85 Adult Brain    1236.8 Adult Thoracic-Abdominal Ganglion    1143.8 Adult Crop    1835.9 Adult Midgut    365.9 Adult Hindgut    331.7 Adult Malpighian Tubules    1379.8 Adult Fat Body    119 Adult Salivary Gland    346.5 Adult Heart    272.275 Adult VirginFemale Spermatheca    223.1 Adult InseminatedFemale Spermatheca    266.2 Adult Ovary    476.6 Adult Testis    560.3 Adult Male Accessory Gland    1058.7 Adult Carcass    305.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    305.925 Larval Midgut    446.5 Larval Hindgut    479.7 Larval Malpighian Tubules  (1639.4) Larval Fat Body  (936.7) Larval Salivary Gland  702 Larval Trachea  (2176.25) Larval Carcass    453.2 Adult Head  647.5 Adult Eye    181.85 Adult Brain  (1236.8) Adult Thoracic-Abdominal Ganglion  (1143.8) Adult Crop  (1835.9) Adult Midgut    365.9 Adult Hindgut    331.7 Adult Malpighian Tubules  (1379.8) Adult Fat Body    119 Adult Salivary Gland    346.5 Adult Heart    272.275 Adult VirginFemale Spermatheca    223.1 Adult InseminatedFemale Spermatheca    266.2 Adult Ovary    476.6 Adult Testis  560.3 Adult Male Accessory Gland  (1058.7) Adult Carcass    305.8 Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    305.925 Larval Midgut    446.5 Larval Hindgut    479.7 Larval Malpighian Tubules  1639.4 Larval Fat Body    936.7 Larval Salivary Gland    702 Larval Trachea  (2176.25) Larval Carcass    453.2 Adult Head    647.5 Adult Eye    181.85 Adult Brain  1236.8 Adult Thoracic-Abdominal Ganglion  1143.8 Adult Crop  (1835.9) Adult Midgut    365.9 Adult Hindgut    331.7 Adult Malpighian Tubules  1379.8 Adult Fat Body    119 Adult Salivary Gland    346.5 Adult Heart    272.275 Adult VirginFemale Spermatheca    223.1 Adult InseminatedFemale Spermatheca    266.2 Adult Ovary    476.6 Adult Testis    560.3 Adult Male Accessory Gland  1058.7 Adult Carcass    305.8 Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    305.925 Larval Midgut    446.5 Larval Hindgut    479.7 Larval Malpighian Tubules    1639.4 Larval Fat Body    936.7 Larval Salivary Gland    702 Larval Trachea    2176.25 Larval Carcass    453.2 Adult Head    647.5 Adult Eye    181.85 Adult Brain    1236.8 Adult Thoracic-Abdominal Ganglion    1143.8 Adult Crop    1835.9 Adult Midgut    365.9 Adult Hindgut    331.7 Adult Malpighian Tubules    1379.8 Adult Fat Body    119 Adult Salivary Gland    346.5 Adult Heart    272.275 Adult VirginFemale Spermatheca    223.1 Adult InseminatedFemale Spermatheca    266.2 Adult Ovary    476.6 Adult Testis    560.3 Adult Male Accessory Gland    1058.7 Adult Carcass    305.8 Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body     Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop     Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland     Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass     FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    647.5   NA  Eye    181.85   NA  Brain    1236.8   305.925  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    1143.8   NA  Crop    1835.9   446.5  Midgut    365.9   479.7  Hindgut    331.7   1639.4  Malpighian Tubules    1379.8   936.7  Fat Body    119   702  Salivary Gland    346.5   NA  Heart    272.275   2176.25  Trachea    NA   NA  VirginFemale Spermatheca    223.1   NA  InseminatedFemale Spermatheca    266.2   NA  Ovary    476.6   NA  Testis    560.3   NA  Male Accessory Gland    1058.7   453.2  Carcass    305.8 FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
modENCODE Anatomy RNA-Seq
modENCODE Tissue Expression Data (modENCODE_mRNA-Seq_tissues)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    23 central nervous system, larvae L3    13 central nervous system, pupae P8    28 head, virgin 1-day female    57 head, virgin 4-day female    46 head, virgin 20-day female    52 head, mated 1-day female    34 head, mated 4-day female    33 head, mated 20-day female    33 head, mated 1-day male    69 head, mated 4-day male    62 head, mated 20-day male    71 salivary gland, larvae L3 wandering    40 salivary gland, white prepupae    49 digestive system, larvae L3 wandering    41 digestive system, 1-day adult    30 digestive system, 4-day adult    22 digestive system, 20-day adult    25 fat body, larvae L3 wandering    12 fat body, white prepupae    31 fat body, pupae P8    70 carcass, larvae L3 wandering    23 carcass, 1-day adult    22 carcass, 4-day adult    19 carcass, 20-day adult    17 ovary, virgin 4-day female    47 ovary, mated 4-day female    32 testis, mated 4-day male    113 accessory gland, mated 4-day male    87 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    23 central nervous system, larvae L3    13 central nervous system, pupae P8  (28) head, virgin 1-day female  (57) head, virgin 4-day female  (46) head, virgin 20-day female  (52) head, mated 1-day female  (34) head, mated 4-day female  (33) head, mated 20-day female  (33) head, mated 1-day male  (69) head, mated 4-day male  (62) head, mated 20-day male  (71) salivary gland, larvae L3 wandering  (40) salivary gland, white prepupae  (49) digestive system, larvae L3 wandering  (41) digestive system, 1-day adult  (30) digestive system, 4-day adult    22 digestive system, 20-day adult    25 fat body, larvae L3 wandering    12 fat body, white prepupae  (31) fat body, pupae P8  (70) carcass, larvae L3 wandering    23 carcass, 1-day adult    22 carcass, 4-day adult    19 carcass, 20-day adult    17 ovary, virgin 4-day female  (47) ovary, mated 4-day female  (32) testis, mated 4-day male  (113) accessory gland, mated 4-day male  (87) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    23 central nervous system, larvae L3    13 central nervous system, pupae P8    28 head, virgin 1-day female    57 head, virgin 4-day female    46 head, virgin 20-day female    52 head, mated 1-day female    34 head, mated 4-day female    33 head, mated 20-day female    33 head, mated 1-day male    69 head, mated 4-day male    62 head, mated 20-day male    71 salivary gland, larvae L3 wandering    40 salivary gland, white prepupae    49 digestive system, larvae L3 wandering    41 digestive system, 1-day adult    30 digestive system, 4-day adult    22 digestive system, 20-day adult    25 fat body, larvae L3 wandering    12 fat body, white prepupae    31 fat body, pupae P8    70 carcass, larvae L3 wandering    23 carcass, 1-day adult    22 carcass, 4-day adult    19 carcass, 20-day adult    17 ovary, virgin 4-day female    47 ovary, mated 4-day female    32 testis, mated 4-day male  (113) accessory gland, mated 4-day male    87 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    23 central nervous system, larvae L3    13 central nervous system, pupae P8    28 head, virgin 1-day female    57 head, virgin 4-day female    46 head, virgin 20-day female    52 head, mated 1-day female    34 head, mated 4-day female    33 head, mated 20-day female    33 head, mated 1-day male    69 head, mated 4-day male    62 head, mated 20-day male    71 salivary gland, larvae L3 wandering    40 salivary gland, white prepupae    49 digestive system, larvae L3 wandering    41 digestive system, 1-day adult    30 digestive system, 4-day adult    22 digestive system, 20-day adult    25 fat body, larvae L3 wandering    12 fat body, white prepupae    31 fat body, pupae P8    70 carcass, larvae L3 wandering    23 carcass, 1-day adult    22 carcass, 4-day adult    19 carcass, 20-day adult    17 ovary, virgin 4-day female    47 ovary, mated 4-day female    32 testis, mated 4-day male    113 accessory gland, mated 4-day male    87 Expression Level Scale  Extremely high  log, scaled to maximum expression level Tissue   Expression Level imaginal disc, larvae L3 wandering    23 central nervous system, larvae L3    13 central nervous system, pupae P8    28 head, virgin 1-day female    57 head, virgin 4-day female    46 head, virgin 20-day female    52 head, mated 1-day female    34 head, mated 4-day female    33 head, mated 20-day female    33 head, mated 1-day male    69 head, mated 4-day male    62 head, mated 20-day male    71 salivary gland, larvae L3 wandering    40 salivary gland, white prepupae    49 digestive system, larvae L3 wandering    41 digestive system, 1-day adult    30 digestive system, 4-day adult    22 digestive system, 20-day adult    25 fat body, larvae L3 wandering    12 fat body, white prepupae    31 fat body, pupae P8    70 carcass, larvae L3 wandering    23 carcass, 1-day adult    22 carcass, 4-day adult    19 carcass, 20-day adult    17 ovary, virgin 4-day female    47 ovary, mated 4-day female    32 testis, mated 4-day male    113 accessory gland, mated 4-day male    87 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Tissue   Expression Level imaginal disc, larvae L3 wandering    23 central nervous system, larvae L3    13 central nervous system, pupae P8  28 head, virgin 1-day female  (57) head, virgin 4-day female  (46) head, virgin 20-day female  (52) head, mated 1-day female  (34) head, mated 4-day female  (33) head, mated 20-day female  (33) head, mated 1-day male  (69) head, mated 4-day male  (62) head, mated 20-day male  (71) salivary gland, larvae L3 wandering  (40) salivary gland, white prepupae  (49) digestive system, larvae L3 wandering  (41) digestive system, 1-day adult  30 digestive system, 4-day adult    22 digestive system, 20-day adult    25 fat body, larvae L3 wandering    12 fat body, white prepupae  31 fat body, pupae P8  (70) carcass, larvae L3 wandering    23 carcass, 1-day adult    22 carcass, 4-day adult    19 carcass, 20-day adult    17 ovary, virgin 4-day female  (47) ovary, mated 4-day female  32 testis, mated 4-day male  (113) accessory gland, mated 4-day male  (87) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Tissue   Expression Level imaginal disc, larvae L3 wandering    23 central nervous system, larvae L3    13 central nervous system, pupae P8    28 head, virgin 1-day female    57 head, virgin 4-day female    46 head, virgin 20-day female    52 head, mated 1-day female    34 head, mated 4-day female    33 head, mated 20-day female    33 head, mated 1-day male    69 head, mated 4-day male    62 head, mated 20-day male    71 salivary gland, larvae L3 wandering    40 salivary gland, white prepupae    49 digestive system, larvae L3 wandering    41 digestive system, 1-day adult    30 digestive system, 4-day adult    22 digestive system, 20-day adult    25 fat body, larvae L3 wandering    12 fat body, white prepupae    31 fat body, pupae P8    70 carcass, larvae L3 wandering    23 carcass, 1-day adult    22 carcass, 4-day adult    19 carcass, 20-day adult    17 ovary, virgin 4-day female    47 ovary, mated 4-day female    32 testis, mated 4-day male  113 accessory gland, mated 4-day male    87 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Tissue   Expression Level imaginal disc, larvae L3 wandering    23 central nervous system, larvae L3    13 central nervous system, pupae P8    28 head, virgin 1-day female    57 head, virgin 4-day female    46 head, virgin 20-day female    52 head, mated 1-day female    34 head, mated 4-day female    33 head, mated 20-day female    33 head, mated 1-day male    69 head, mated 4-day male    62 head, mated 20-day male    71 salivary gland, larvae L3 wandering    40 salivary gland, white prepupae    49 digestive system, larvae L3 wandering    41 digestive system, 1-day adult    30 digestive system, 4-day adult    22 digestive system, 20-day adult    25 fat body, larvae L3 wandering    12 fat body, white prepupae    31 fat body, pupae P8    70 carcass, larvae L3 wandering    23 carcass, 1-day adult    22 carcass, 4-day adult    19 carcass, 20-day adult    17 ovary, virgin 4-day female    47 ovary, mated 4-day female    32 testis, mated 4-day male    113 accessory gland, mated 4-day male    87 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Tissue   Expression Level imaginal disc, larvae L3 wandering     central nervous system, larvae L3     central nervous system, pupae P8     head, virgin 1-day female     head, virgin 4-day female     head, virgin 20-day female     head, mated 1-day female     head, mated 4-day female     head, mated 20-day female     head, mated 1-day male     head, mated 4-day male     head, mated 20-day male     salivary gland, larvae L3 wandering     salivary gland, white prepupae     digestive system, larvae L3 wandering     digestive system, 1-day adult     digestive system, 4-day adult     digestive system, 20-day adult     fat body, larvae L3 wandering     fat body, white prepupae     fat body, pupae P8     carcass, larvae L3 wandering     carcass, 1-day adult     carcass, 4-day adult     carcass, 20-day adult     ovary, virgin 4-day female     ovary, mated 4-day female     testis, mated 4-day male     accessory gland, mated 4-day male
modENCODE Development RNA-Seq
modENCODE Temporal Expression Data (modENCODE_mRNA-Seq_U)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of moderate expression. Peak expression observed during late pupal stages. [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    45 embryo 02-04hr    50 embryo 04-06hr    18 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    13 embryo 12-14hr    13 embryo 14-16hr    22 embryo 16-18hr    24 embryo 18-20hr    36 embryo 20-22hr    55 embryo 22-24hr    60 larva L1    31 larva L2    30 larva L3 12hr old    32 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    35 white prepupae new    31 white prepupae 12hr    50 white prepupae 24hr    43 pupae 2d postWPP    203 pupae 3d postWPP    71 pupae 4d postWPP    61 adult male 01day    52 adult male 05day    48 adult male 30day    46 adult female 01day    42 adult female 05day    30 adult female 30day    31 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (45) embryo 02-04hr  (50) embryo 04-06hr    18 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    13 embryo 12-14hr    13 embryo 14-16hr    22 embryo 16-18hr    24 embryo 18-20hr  (36) embryo 20-22hr  (55) embryo 22-24hr  (60) larva L1  (31) larva L2  (30) larva L3 12hr old  (32) larva L3 puffstage 1-2  (29) larva L3 puffstage 3-6  (30) larva L3 puffstage 7-9  (35) white prepupae new  (31) white prepupae 12hr  (50) white prepupae 24hr  (43) pupae 2d postWPP  (203) pupae 3d postWPP  (71) pupae 4d postWPP  (61) adult male 01day  (52) adult male 05day  (48) adult male 30day  (46) adult female 01day  (42) adult female 05day  (30) adult female 30day  (31) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    45 embryo 02-04hr    50 embryo 04-06hr    18 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    13 embryo 12-14hr    13 embryo 14-16hr    22 embryo 16-18hr    24 embryo 18-20hr    36 embryo 20-22hr    55 embryo 22-24hr    60 larva L1    31 larva L2    30 larva L3 12hr old    32 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    35 white prepupae new    31 white prepupae 12hr    50 white prepupae 24hr    43 pupae 2d postWPP  (203) pupae 3d postWPP    71 pupae 4d postWPP    61 adult male 01day    52 adult male 05day    48 adult male 30day    46 adult female 01day    42 adult female 05day    30 adult female 30day    31 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    45 embryo 02-04hr    50 embryo 04-06hr    18 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    13 embryo 12-14hr    13 embryo 14-16hr    22 embryo 16-18hr    24 embryo 18-20hr    36 embryo 20-22hr    55 embryo 22-24hr    60 larva L1    31 larva L2    30 larva L3 12hr old    32 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    35 white prepupae new    31 white prepupae 12hr    50 white prepupae 24hr    43 pupae 2d postWPP    203 pupae 3d postWPP    71 pupae 4d postWPP    61 adult male 01day    52 adult male 05day    48 adult male 30day    46 adult female 01day    42 adult female 05day    30 adult female 30day    31 Expression Level Scale  Extremely high  log, scaled to maximum expression level Developmental Stage   Expression Level embryo 00-02hr    45 embryo 02-04hr    50 embryo 04-06hr    18 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    13 embryo 12-14hr    13 embryo 14-16hr    22 embryo 16-18hr    24 embryo 18-20hr    36 embryo 20-22hr    55 embryo 22-24hr    60 larva L1    31 larva L2    30 larva L3 12hr old    32 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    35 white prepupae new    31 white prepupae 12hr    50 white prepupae 24hr    43 pupae 2d postWPP    203 pupae 3d postWPP    71 pupae 4d postWPP    61 adult male 01day    52 adult male 05day    48 adult male 30day    46 adult female 01day    42 adult female 05day    30 adult female 30day    31 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr  (45) embryo 02-04hr  (50) embryo 04-06hr    18 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    13 embryo 12-14hr    13 embryo 14-16hr    22 embryo 16-18hr    24 embryo 18-20hr  (36) embryo 20-22hr  (55) embryo 22-24hr  (60) larva L1  31 larva L2  30 larva L3 12hr old  32 larva L3 puffstage 1-2  29 larva L3 puffstage 3-6  30 larva L3 puffstage 7-9  (35) white prepupae new  31 white prepupae 12hr  (50) white prepupae 24hr  (43) pupae 2d postWPP  (203) pupae 3d postWPP  (71) pupae 4d postWPP  (61) adult male 01day  (52) adult male 05day  (48) adult male 30day  (46) adult female 01day  (42) adult female 05day  30 adult female 30day  31 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    45 embryo 02-04hr    50 embryo 04-06hr    18 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    13 embryo 12-14hr    13 embryo 14-16hr    22 embryo 16-18hr    24 embryo 18-20hr    36 embryo 20-22hr    55 embryo 22-24hr    60 larva L1    31 larva L2    30 larva L3 12hr old    32 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    35 white prepupae new    31 white prepupae 12hr    50 white prepupae 24hr    43 pupae 2d postWPP  (203) pupae 3d postWPP    71 pupae 4d postWPP    61 adult male 01day    52 adult male 05day    48 adult male 30day    46 adult female 01day    42 adult female 05day    30 adult female 30day    31 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    45 embryo 02-04hr    50 embryo 04-06hr    18 embryo 06-08hr    6 embryo 08-10hr    11 embryo 10-12hr    13 embryo 12-14hr    13 embryo 14-16hr    22 embryo 16-18hr    24 embryo 18-20hr    36 embryo 20-22hr    55 embryo 22-24hr    60 larva L1    31 larva L2    30 larva L3 12hr old    32 larva L3 puffstage 1-2    29 larva L3 puffstage 3-6    30 larva L3 puffstage 7-9    35 white prepupae new    31 white prepupae 12hr    50 white prepupae 24hr    43 pupae 2d postWPP    203 pupae 3d postWPP    71 pupae 4d postWPP    61 adult male 01day    52 adult male 05day    48 adult male 30day    46 adult female 01day    42 adult female 05day    30 adult female 30day    31 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     modENCODE Temporal Expression Data (Graveley et al., 2011)
modENCODE Cell Lines RNA-Seq
modENCODE Cell Line Expression Data (modENCODE_mRNA-Seq_cell.A) (modENCODE_mRNA-Seq_cell.B)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    206 Schneider line 2 Sg4    94 embryonic 1182-4H    67 embryonic GM2    110 embryonic Kc167    3 embryonic S1    85 embryonic S3    43 leg disc CME L1    65 wing disc CME-W2    91 wing disc ML-DmD8    37 wing disc ML-DmD9    62 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    58 wing disc ML-DmD32    46 haltere disc ML-DmD17-c3    89 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    47 mixed discs ML-DmD4-c1    85 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2    131 tumorous blood cells mbn2    127 ovary fGS/OSS    6 ovary OSC    22 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (206) Schneider line 2 Sg4  (94) embryonic 1182-4H  (67) embryonic GM2  (110) embryonic Kc167    3 embryonic S1  (85) embryonic S3  (43) leg disc CME L1  (65) wing disc CME-W2  (91) wing disc ML-DmD8  (37) wing disc ML-DmD9  (62) wing disc ML-DmD16-c3  (37) wing disc ML-DmD21  (58) wing disc ML-DmD32  (46) haltere disc ML-DmD17-c3  (89) eye-antennal disc ML-DmD11  (35) antennal disc ML-DmD20-c5  (47) mixed discs ML-DmD4-c1  (85) CNS ML-DmBG1-c1  26 CNS ML-DmBG2-c2  (131) tumorous blood cells mbn2  (127) ovary fGS/OSS    6 ovary OSC    22 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (206) Schneider line 2 Sg4    94 embryonic 1182-4H    67 embryonic GM2  (110) embryonic Kc167    3 embryonic S1    85 embryonic S3    43 leg disc CME L1    65 wing disc CME-W2    91 wing disc ML-DmD8    37 wing disc ML-DmD9    62 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    58 wing disc ML-DmD32    46 haltere disc ML-DmD17-c3    89 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    47 mixed discs ML-DmD4-c1    85 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2  (131) tumorous blood cells mbn2  (127) ovary fGS/OSS    6 ovary OSC    22 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    206 Schneider line 2 Sg4    94 embryonic 1182-4H    67 embryonic GM2    110 embryonic Kc167    3 embryonic S1    85 embryonic S3    43 leg disc CME L1    65 wing disc CME-W2    91 wing disc ML-DmD8    37 wing disc ML-DmD9    62 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    58 wing disc ML-DmD32    46 haltere disc ML-DmD17-c3    89 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    47 mixed discs ML-DmD4-c1    85 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2    131 tumorous blood cells mbn2    127 ovary fGS/OSS    6 ovary OSC    22 ovary OSS    4 Expression Level Scale  Extremely high  log, scaled to maximum expression level Cell Line   Expression Level Schneider line 2 S2R+    206 Schneider line 2 Sg4    94 embryonic 1182-4H    67 embryonic GM2    110 embryonic Kc167    3 embryonic S1    85 embryonic S3    43 leg disc CME L1    65 wing disc CME-W2    91 wing disc ML-DmD8    37 wing disc ML-DmD9    62 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    58 wing disc ML-DmD32    46 haltere disc ML-DmD17-c3    89 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    47 mixed discs ML-DmD4-c1    85 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2    131 tumorous blood cells mbn2    127 ovary fGS/OSS    6 ovary OSC    22 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Moderate expression Cell Line   Expression Level Schneider line 2 S2R+  (206) Schneider line 2 Sg4  (94) embryonic 1182-4H  (67) embryonic GM2  (110) embryonic Kc167    3 embryonic S1  (85) embryonic S3  (43) leg disc CME L1  (65) wing disc CME-W2  (91) wing disc ML-DmD8  (37) wing disc ML-DmD9  (62) wing disc ML-DmD16-c3  (37) wing disc ML-DmD21  (58) wing disc ML-DmD32  (46) haltere disc ML-DmD17-c3  (89) eye-antennal disc ML-DmD11  (35) antennal disc ML-DmD20-c5  (47) mixed discs ML-DmD4-c1  (85) CNS ML-DmBG1-c1  26 CNS ML-DmBG2-c2  (131) tumorous blood cells mbn2  (127) ovary fGS/OSS    6 ovary OSC    22 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Cell Line   Expression Level Schneider line 2 S2R+  (206) Schneider line 2 Sg4    94 embryonic 1182-4H    67 embryonic GM2  110 embryonic Kc167    3 embryonic S1    85 embryonic S3    43 leg disc CME L1    65 wing disc CME-W2    91 wing disc ML-DmD8    37 wing disc ML-DmD9    62 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    58 wing disc ML-DmD32    46 haltere disc ML-DmD17-c3    89 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    47 mixed discs ML-DmD4-c1    85 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2  131 tumorous blood cells mbn2  127 ovary fGS/OSS    6 ovary OSC    22 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Cell Line   Expression Level Schneider line 2 S2R+    206 Schneider line 2 Sg4    94 embryonic 1182-4H    67 embryonic GM2    110 embryonic Kc167    3 embryonic S1    85 embryonic S3    43 leg disc CME L1    65 wing disc CME-W2    91 wing disc ML-DmD8    37 wing disc ML-DmD9    62 wing disc ML-DmD16-c3    37 wing disc ML-DmD21    58 wing disc ML-DmD32    46 haltere disc ML-DmD17-c3    89 eye-antennal disc ML-DmD11    35 antennal disc ML-DmD20-c5    47 mixed discs ML-DmD4-c1    85 CNS ML-DmBG1-c1    26 CNS ML-DmBG2-c2    131 tumorous blood cells mbn2    127 ovary fGS/OSS    6 ovary OSC    22 ovary OSS    4 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Cell Line   Expression Level Schneider line 2 S2R+     Schneider line 2 Sg4     embryonic 1182-4H     embryonic GM2     embryonic Kc167     embryonic S1     embryonic S3     leg disc CME L1     wing disc CME-W2     wing disc ML-DmD8     wing disc ML-DmD9     wing disc ML-DmD16-c3     wing disc ML-DmD21     wing disc ML-DmD32     haltere disc ML-DmD17-c3     eye-antennal disc ML-DmD11     antennal disc ML-DmD20-c5     mixed discs ML-DmD4-c1     CNS ML-DmBG1-c1     CNS ML-DmBG2-c2     tumorous blood cells mbn2     ovary fGS/OSS     ovary OSC     ovary OSS
modENCODE Treatments RNA-Seq
modENCODE Treatment Expression Data (modENCODE_mRNA-Seq_treatments)    Styles Linear Logarithmic Heatmap    Scales gene max expression Moderate expression bin max High expression bin max Extremely high expression bin max [download data (TSV)] Guide to modENCODE expression level colors   No/Extremely low expression (0 - 0)   Very low expression (1 - 3)   Low expression (4 - 10)   Moderate expression (11 - 25)   Moderately high expression (26 - 50)   High expression (51 - 100)   Very high expression (101 - 1000)   Extremely high expression (>1000) Linear, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    11 heat shock, 4-day adult    28 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    44 Cadmium 50 mM 48 hrs, 4-day adult    28 Cadmium 100 mM 48 hrs, 4-day adult    29 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    19 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    16 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    30 Caffeine 1.5 mg/ml 4 hrs, larvae L3    41 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    32 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    43 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    34 Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    11 heat shock, 4-day adult  (28) Cadmium 50 mM 6 hrs, larvae L3  (45) Cadmium 50 mM 12 hrs, larvae L3  (44) Cadmium 50 mM 48 hrs, 4-day adult  (28) Cadmium 100 mM 48 hrs, 4-day adult  (29) Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    19 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    16 Ethanol 2.5% 3 hrs, larvae L3  (34) Ethanol 5% 3 hrs, larvae L3  (45) Ethanol 10% 3 hrs, larvae L3  (30) Caffeine 1.5 mg/ml 4 hrs, larvae L3  (41) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  (32) Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult  (43) Paraquat 10 mM 48 hrs, 4-day adult  (40) Rotenone 2 μg 12 hrs, larvae L3  (41) Rotenone 8 μg 12 hrs, larvae L3  (34) Expression Level Scale  Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    11 heat shock, 4-day adult    28 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    44 Cadmium 50 mM 48 hrs, 4-day adult    28 Cadmium 100 mM 48 hrs, 4-day adult    29 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    19 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    16 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    30 Caffeine 1.5 mg/ml 4 hrs, larvae L3    41 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    32 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    43 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    34 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    11 heat shock, 4-day adult    28 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    44 Cadmium 50 mM 48 hrs, 4-day adult    28 Cadmium 100 mM 48 hrs, 4-day adult    29 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    19 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    16 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    30 Caffeine 1.5 mg/ml 4 hrs, larvae L3    41 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    32 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    43 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    34 Expression Level Scale  Extremely high  log, scaled to maximum expression level Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    11 heat shock, 4-day adult    28 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    44 Cadmium 50 mM 48 hrs, 4-day adult    28 Cadmium 100 mM 48 hrs, 4-day adult    29 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    19 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    16 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    30 Caffeine 1.5 mg/ml 4 hrs, larvae L3    41 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    32 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    43 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    34 Expression Level Scale  Very low   Low   Moderate   Moderately high   High  log, scaled to Moderate expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    11 heat shock, 4-day adult  28 Cadmium 50 mM 6 hrs, larvae L3  (45) Cadmium 50 mM 12 hrs, larvae L3  (44) Cadmium 50 mM 48 hrs, 4-day adult  28 Cadmium 100 mM 48 hrs, 4-day adult  29 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    19 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    16 Ethanol 2.5% 3 hrs, larvae L3  (34) Ethanol 5% 3 hrs, larvae L3  (45) Ethanol 10% 3 hrs, larvae L3  30 Caffeine 1.5 mg/ml 4 hrs, larvae L3  (41) Caffeine 2.5 mg/ml 48 hrs, 4-day adult  32 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult  (43) Paraquat 10 mM 48 hrs, 4-day adult  (40) Rotenone 2 μg 12 hrs, larvae L3  (41) Rotenone 8 μg 12 hrs, larvae L3  (34) Expression Level Scale  Very low   Low   Moderate   Moderately high  log, scaled to High expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    11 heat shock, 4-day adult    28 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    44 Cadmium 50 mM 48 hrs, 4-day adult    28 Cadmium 100 mM 48 hrs, 4-day adult    29 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    19 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    16 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    30 Caffeine 1.5 mg/ml 4 hrs, larvae L3    41 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    32 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    43 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    34 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Treatment   Expression Level extended cold, 4-day adult    13 cold shock, 4-day adult    11 heat shock, 4-day adult    28 Cadmium 50 mM 6 hrs, larvae L3    45 Cadmium 50 mM 12 hrs, larvae L3    44 Cadmium 50 mM 48 hrs, 4-day adult    28 Cadmium 100 mM 48 hrs, 4-day adult    29 Copper 0.5 mM 12 hrs, larvae L3    17 Copper 15 mM 48 hrs, 4-day adult    19 Zinc 5 mM 12 hrs, larvae L3    15 Zinc 4.5 mM 48 hrs, 4-day adult    16 Ethanol 2.5% 3 hrs, larvae L3    34 Ethanol 5% 3 hrs, larvae L3    45 Ethanol 10% 3 hrs, larvae L3    30 Caffeine 1.5 mg/ml 4 hrs, larvae L3    41 Caffeine 2.5 mg/ml 48 hrs, 4-day adult    32 Caffeine 25 mg/ml 48 hrs, 4-day adult    12 Paraquat 5 mM 48 hrs, 4-day adult    43 Paraquat 10 mM 48 hrs, 4-day adult    40 Rotenone 2 μg 12 hrs, larvae L3    41 Rotenone 8 μg 12 hrs, larvae L3    34 Expression Level Scale  Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Treatment   Expression Level extended cold, 4-day adult     cold shock, 4-day adult     heat shock, 4-day adult     Cadmium 50 mM 6 hrs, larvae L3     Cadmium 50 mM 12 hrs, larvae L3     Cadmium 50 mM 48 hrs, 4-day adult     Cadmium 100 mM 48 hrs, 4-day adult     Copper 0.5 mM 12 hrs, larvae L3     Copper 15 mM 48 hrs, 4-day adult     Zinc 5 mM 12 hrs, larvae L3     Zinc 4.5 mM 48 hrs, 4-day adult     Ethanol 2.5% 3 hrs, larvae L3     Ethanol 5% 3 hrs, larvae L3     Ethanol 10% 3 hrs, larvae L3     Caffeine 1.5 mg/ml 4 hrs, larvae L3     Caffeine 2.5 mg/ml 48 hrs, 4-day adult     Caffeine 25 mg/ml 48 hrs, 4-day adult     Paraquat 5 mM 48 hrs, 4-day adult     Paraquat 10 mM 48 hrs, 4-day adult     Rotenone 2 μg 12 hrs, larvae L3     Rotenone 8 μg 12 hrs, larvae L3
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010, Graveley et al., 2011) mE2_34_mRNA_expression_cluster_24 mE1_20_mRNA_expression_cluster_15
External Data & Images
Linkouts	BDGP expression data • GH23190 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035321 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG1275-RB
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable CG1275EY08817 viable, with Scer\GAL4pnr-MD237 CG1275GD2260 Sterility Allele fertile CG1275EY08817 Other Phenotypes Allele body color defective, with Scer\GAL4pnr-MD237 CG1275GD2260 Phenotype manifest in Allele mesothoracic tergum, with Scer\GAL4pnr-MD237 CG1275GD2260
Classical Alleles ( 13 )
For All Classical Alleles Show
Allele of CG1275 Class Mutagen Stocks Known lesion CG1275c03429 piggyBac transposase 1 -- CG1275d02223 P-element activity 1 -- CG1275e00487 piggyBac transposase 1 -- CG1275e01413 piggyBac transposase 1 -- CG1275EP373 P-element activity 1 -- CG1275EY08817 P-element activity 1 -- CG1275f04958 piggyBac transposase 1 -- CG1275MI03905 1 -- CG1275e02735 piggyBac transposase 0 -- CG1275e02789 piggyBac transposase 0 -- CG1275e03095 piggyBac transposase 0 -- CG1275e03488 0 -- CG1275f07597 piggyBac transposase 0 --
Alleles Carried on Transgenic Constructs ( 2 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG1275 Class Mutagen Stocks Known lesion CG1275GD2260 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes CG1275KK101451 in vitro construct - RNAi in vitro construct - regulatory fusion 1 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD2260} NA P{KK101451} NA
Insertions
	Type of insertions Name Expression data insertion of mobile activating element P{EP}CG1275EP373 NA P{EPgy2}CG1275EY08817 NA P{XP}CG1275d02223 NA miscellaneous insertions Mi{MIC}CG1275MI03905 NA P{wHy}CG2034DG07103 NA PBac{PB}CG1275c03429 NA PBac{RB}CG1275e00487 NA PBac{RB}CG1275e01413 NA PBac{RB}CG1275e02735 NA PBac{RB}CG1275e02789 NA PBac{RB}CG1275e03095 NA PBac{RB}CG1275e03488 NA PBac{WH}CG1275f04958 NA PBac{WH}CG1275f07597 NA
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
electron carrier activity inferred from sequence or structural similarity with UniProtKB:Q95204 (FlyBase, 1992-)
Biological Process ( 0 terms)
Cellular Component
CV term Evidence References
integral to membrane inferred from electronic annotation with InterPro:IPR004877 (FlyBase Curators et al., 2004-) transport vesicle inferred from sequence or structural similarity with UniProtKB:Q95204 (FlyBase, 1992-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG1275 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 63802 DroID - A comprehensive database of gene and protein interactions. • FBgn0035321 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38286
Orthologs
OrthoDB Orthologs (57) - based on analysis using Dmel annotation version 5.41
OrthoDB Ortholog Groups
	OrthoDB orthology group searches (Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288) Drosophila inclusive ortholog search EOG6N3185 Dipteran inclusive ortholog search EOG68KRM6 Insect inclusive ortholog search EOG60RZBV Arthropod inclusive ortholog search EOG60P2PX Metazoa inclusive ortholog search EOG6F28XP
Orthologs in Drosophila Species (EOG6N3185)
Organism Common Name Gene AAA Syntenic Ortholog Multiple Dmel Genes in this Orthologous Group Drosophila melanogaster fruit fly  Dmel\CG1275     Drosophila simulans   Dsim\GD13402     Drosophila simulans   Dsim\GD13398 Y   Drosophila sechellia   Dsec\GM14130 Y   Drosophila erecta   Dere\GG14525 Y   Drosophila yakuba   Dyak\GE21717 Y   Drosophila ananassae   Dana\GF24874 Y   Drosophila pseudoobscura pseudoobscura   Dpse\GA11787 Y   Drosophila persimilis   Dper\GL24623 Y   Drosophila willistoni   Dwil\GK12595 Y   Drosophila virilis   Dvir\GJ13433 Y   Drosophila mojavensis   Dmoj\GI12153 Y   Drosophila grimshawi   Dgri\GH16482 Y
Orthologs in non-Drosophila Dipterans (EOG68KRM6)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Aedes aegypti Yellow fever mosquito  Aaeg\AAEL012832   Anopheles gambiae Malaria mosquito  Agam\AGAP005520   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ018407   Culex quinquefasciatus Southern house mosquito  Cqui\CPIJ007418
Orthologs in non-Dipteran Insects (EOG60RZBV)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Apis mellifera Western honey bee  Amel\GB47538   Nasonia vitripennis Parasitic wasp  Nvit\Nasvi2EG006755   Acromyrmex echinatior Panamanian leafcutter ant  Aech\AECH10376   Atta cephalotes Leafcutter ant  Acep\ACEP10487   Camponotus floridanus Florida carpenter ant  Cflo\CFLO16836   Harpegnathos saltator Jerdons jumping ant  Hsal\HSAL12963   Linepithema humile Argentine ant  Lhum\LH22207   Pogonomyrmex barbatus Red harvester ant  Pbar\PB11131   Solenopsis invicta Red fire ant  Sinv\SINV19423   Acyrthosiphon pisum Pea aphid  Apim\ACYPI009920   Acyrthosiphon pisum Pea aphid  Apim\ACYPI005935   Acyrthosiphon pisum Pea aphid  Apim\ACYPI29519   Acyrthosiphon pisum Pea aphid  Apim\ACYPI003995   Acyrthosiphon pisum Pea aphid  Apim\ACYPI000214   Pediculus humanus Human body louse  Phum\PHUM268760   Tribolium castaneum Red flour beetle  Tcas\GLEAN_15521
Orthologs in non-Insect Arthropods (EOG60P2PX)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Ixodes scapularis Deer tick  Isca\ISCW005388
Orthologs in non-Arthropod Metazoa (EOG6F28XP)
Organism Common Name Gene Multiple Dmel Genes in this Orthologous Group Caenorhabditis elegans Nematode  Cele\F55H2.5 Y Caenorhabditis elegans Nematode  Cele\F39G3.5 Y Caenorhabditis elegans Nematode  Cele\F39G3.4 Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_027727gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_012183gn Y Strongylocentrotus purpuratus Purple sea urchin  Spur\SPU_000484gn Y Danio rerio Zebrafish  Drer\si:dkey-60i9.4 Y Danio rerio Zebrafish  Drer\CH211-245G15.3 Y Danio rerio Zebrafish  Drer\cybasc3 Y Danio rerio Zebrafish  Drer\LOC568765 Y Xenopus tropicalis Western clawed frog  Xtro\cyb561 Y Xenopus tropicalis Western clawed frog  Xtro\cybrd1 Y Gallus gallus Domestic chicken  Ggal\CYBRD1 Y Gallus gallus Domestic chicken  Ggal\CYBASC3 Y Gallus gallus Domestic chicken  Ggal\CYB561 Y Mus musculus House mouse  Mmus\Cyb561 Y Mus musculus House mouse  Mmus\Cybasc3 Y Mus musculus House mouse  Mmus\Cybrd1 Y Rattus norvegicus Norway rat  Rnor\Cybrd1 Y Rattus norvegicus Norway rat  Rnor\Cybasc3 Y Rattus norvegicus Norway rat  Rnor\ENSRNOG00000007433 Y Homo sapiens Human  Hsap\CYB561 Y Homo sapiens Human  Hsap\CYBRD1 Y
Human Orthologs (2)
Gene OMIM HGNC Hsap\CYB561     Hsap\CYBRD1
AAA Orthologs (11) based on analysis using Dmel annotation version 4.3
Organism Gene Drosophila simulans Dsim\GD13398 Drosophila sechellia Dsec\GM14130 Drosophila erecta Dere\GG14525 Drosophila yakuba Dyak\GE21717 Drosophila ananassae Dana\GF24874 Drosophila pseudoobscura pseudoobscura Dpse\GA11787 Drosophila persimilis Dper\GL24623 Drosophila willistoni Dwil\GK12595 Drosophila virilis Dvir\GJ13433 Drosophila mojavensis Dmoj\GI12153 Drosophila grimshawi Dgri\GH16482
Stocks & Reagents
Stocks Listed in FlyBase ( 10 )
Bloomington	17162 w1118; P{EP}CG1275EP373 36958 y1 w*; Mi{MIC}CG1275MI03905 17498 y1 w67c23; P{EPgy2}CG1275EY08817
Harvard	- P{XP}CG1275d02223 - PBac{PB}CG1275c03429 - PBac{RB}CG1275e00487 - PBac{RB}CG1275e01413 - PBac{WH}CG1275f04958
VDRC	v105418 P{KK101451}VIE-260B v4103 w1118; P{GD2260}v4103
Genomic Clones ( 1 )
	BACR22J16 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 112 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	GH23190 LD36721
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	AT07801 GH04332 GH07210 GH09421 GH11175 GH17077 GH22366 GM04119 GM04258 GM09885 HL05666 LD06406 LD10062 LD12070 LD19059 LD23781 LD37509 LD40152 LD43925 LD45336 LP23358 RH11715 RH18562 RH51956 SD08409 SD13208 SD13822 SD18231 SD18984 SD19790 SD22153 SD22331 SD22616 SD23147 SD25822 SD27650
Other clones	53880 66979 69545 120125 175391 214573.18 273620 Dmel_dig_015783_0706_1804 Dmel_neb_010606_0655_0731 EC24062 EK048158 EK139504 EK142024 EK154822 EK161156 EK174805 EK178144 EK184106 EK195119 EK196827 EK251552 EK279919 EP03940 ESG0116c.B21_C02 GH01716 LD22327 LD46236 RP004028158 RP004040324 RP004058344 RP004068124 RP004078499 RP004117359 RP004120178 RP004135718 RP004138123 RP004154408 RP004155551 RP004182547 RP004191083 RP004198086 RP004205551 RP004208874 RP004227382 RP004228397 RP004232706 RP004233422 RP004240883 RP004243376 RP004254577 RP004255820 RP004262634 RP004331505 RP004352990 RP004366113 RP004366853 RP004374732 RP004379771 RP004411320 RP004413461 RP004422240 RP004458744 RP004465361 RP004477073 RP004493915 RP004499268 RP004504670 RP004505216 RP004505382 RP004521944 RP004536938 RP004538963 RP004543676 RP004549292
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0035321 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38286
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of	Source for merge of: CG1275 anon-WO0118547.260 (FlyBase, 1996-)
Additional comments	Source for merge of CG1275 anon-WO0118547.260 was sequence comparison (date:041213). (FlyBase, 1996-)
Other Comments
	Area matching Drosophila EST AA392916 (inverted). (Davies, 2001.3.15)
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_139446 NM_167941 NM_167942 NM_206241 RefSeq (Proteins) • NP_647703 NP_728726 NP_728727 NP_995963 DDBJ / EMBL / GenBank • AA392916 AAF47623 AAG22228 AAG22229 AAL13890 AAO25057 AAS64936 AI403697 AI456634 AQ025069 AW943354 AX094136 AY058661 BT003297 CL526048 CZ468648 CZ468649 CZ472684 CZ478370 CZ479223 CZ480507 CZ480559 CZ480862 CZ487544 CZ490342 Entrez Gene - A searchable database of RefSeq genes. • 38286 UniProtKB/TrEMBL • Q7KV99 Q9I7U1 Q9I7U2
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Cytochrome b561/ferric reductase transmembrane (IPR006593) Cytochrome b561, eukaryote (IPR004877) BDGP expression data - Patterns of gene expression in Drosophila embryogenesis • GH23190
Linkouts
	BioGRID - A database of protein and genetic interactions • 63802 DroID - A comprehensive database of gene and protein interactions. • FBgn0035321 DRSC - Results from RNAi screens. • FBgn0035321 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035321 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG1275-RB FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0035321 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38286 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38286 modMine - Data generated by the modENCODE project. • FBgn0035321
Synonyms & Secondary IDs ( 4 )
Reported As
Symbol Synonym	anon-WO0118547.260   CG1275 (Mosallanejad et al., 2010, Park et al., 2011, Keleman et al., 2009.8.5, Cammarato et al., 2011, Malone et al., 2012) Cyt-b561-1 (Park et al., 2011)
Name Synonym	cytochrome b561-1 (Park et al., 2011)
Secondary FlyBase IDs
	FBgn0062138
References ( 25 )
Generate a list of	All references relating to this gene ( 25 )
List References by type	Research paper  ( 5 ) Supplementary material  ( 5 ) Personal communication to FlyBase  ( 8 ) FlyBase analysis  ( 3 ) Patent  ( 1 ) DNA/RNA sequence record  ( 1 ) Website  ( 1 ) Curated genome annotation  ( 1 )
Recent research papers ( 2 )
	Malone et al., 2012, Genome Biol. 13(4): r28 Mediation of Drosophila autosomal dosage effects and compensation by network interactions. [FBrf0219684] Park et al., 2011, Curr. Biol. 21(18): 1515--1524 Molecular organization of Drosophila neuroendocrine cells by dimmed. [FBrf0216231] Show all research papers ...