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Gene Dmel\CG13806

General Information
Symbol	Dmel\CG13806	Species	D. melanogaster
Name		Annotation symbol	CG13806
Feature type	protein_coding_gene	FlyBase ID	FBgn0035325
Gene Model Status	Current	Stock availability	2 publicly available
Genomic Location
Chromosome (arm)	3L	Recombination map
Cytogenetic map	62D4-62D4	Sequence location	3L:2,266,394..2,267,640 [+]
Genomic Maps Select View:Gene Models/EvidenceExpression/RegulationMegaViewGene Disruptions, Stocks and Reagents modENCODE GBrowse	Decorated FastA GenBankGFF Gene region Extended Gene region CDSIntronsExonsTranslationsTranscripts3' UTR5' UTR
Summary Information
Automatically generated summary See sections below for more information	This gene is referred to in FlyBase by the symbol Dmel\CG13806 (FBgn0035325). It is a protein_coding_gene from Drosophila melanogaster. An electronic pipeline based on InterPro domains suggests that it has the molecular function: chitin binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: chitin metabolic process. 3 alleles are reported. The phenotype of these alleles is annotated with: trichogen cell. It has one annotated transcript and one annotated polypeptide. Protein features are: Chitin binding domain. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed within 12-24 hour embryonic stages. Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval midgut. Expression at moderate levels in the following post-embryonic organs or tissues: adult midgut. Comments on Affy2 ProbeSet: ProbeSet 1626285_at completely aligns to an exonic region of the only FlyBase-annotated transcript isoform of CG13806. Gene sequence location is 3L:2266394..2267640.
Recent Updates
Description	What does this section display? This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms). What does this section not display? This section does not currently display links that were removed or gene model changes.
Update Feed	Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.
FB2012_01	Sequence features HFA08341 BKN31626
FB2011_10
All updates	Click here to see a list of all updates to this record from FB2010_08 and on.
Detailed Mapping Data
FlyBase Computed Cytological Location
Cytogenetic map Evidence for location 62D4-62D4   Limits computationally determined from genome sequence between P{PZ}slsrL182 and P{PZ}Spn06911
Experimentally Determined Cytological Location
Cytogenetic map Notes References
Experimentally Determined Recombination Data
Location
Left of (cM)
Right of (cM)
Notes
Gene Model & Products
Please see the GBrowse view of Dmel\CG13806 for information on other features To submit a correction to a gene model please use the Contact FlyBase form
Comments on Gene Model
Transcript Data
Annotated Transcripts
Name FlyBase ID RefSeq ID Length (nt) Associated CDS (aa) CG13806-RA FBtr0072879  NM_139451   1175   297
Additional Transcript Data & Comments
Reported size (kB)
Comments
External Data
Crossreferences
Polypeptide Data
Annotated Polypeptides
Name FlyBase ID Predicted MW (kDa) Length (aa) Theoretical pI RefSeq ID GenBank protein CG13806-PA   FBpp0072758   32.6   297   4.58     NP_647708   AAF47629
Additional Polypeptide Data & Comments
Reported size (kDa)
Comments
External Data
Linkouts
Crossreferences	InterPro domains - A database of protein families, domains, and functional sites • Chitin binding domain (IPR002557)
Sequences Consistent with the Gene Model
DDBJ / EMBL / GenBank	DNA sequence Protein sequence Name AE014296 AAF47629   AY089572 AAL90310   BI167690   BI168447   BI618170   BI622079   BP544205   BP555252
UniProtKB/Swiss-Prot
UniProtKB/TrEMBL	Q8SXL5
Mapped Features
Mapped Features have been reorganized, please see this article for details. Additional mapped features and mutations can be found on GBrowse or related reports. Type Symbol & Location Additional Notes References
External Data
Linkouts
Crossreferences
Expression Data
Transcript Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
Polypeptide Expression
Additional Descriptive Data
Marker for
Subcellular Localization
CV Term
Notes
High-Throughput Expression Data
or
See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes. modENCODE Temporal Expression Data for FBgn0035325    Styles Linear Logarithmic Heatmap    Scales max expr for FBgn0035325 Very low expression bin max Moderate expression bin max High expression bin max Extremely high expression bin max Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of very low expression. Peak expression observed within 12-24 hour embryonic stages. [download data (TSV)] Guide to modENCODE expression level colors   No expression (0 - 0)   Extremely low expression (1 - 10)   Very low expression (11 - 100)   Low expression (101 - 400)   Moderate expression (401 - 1400)   Moderately high expression (1401 - 4000)   High expression (4001 - 10000)   Very high expression (10001 - 100000)   Extremely high expression (100001 - 2000000) Linear, scaled to maximum FBgn0035325 expression level Developmental Stage   Expression Level embryo 00-02hr    21 embryo 02-04hr    31 embryo 04-06hr    42 embryo 06-08hr    60 embryo 08-10hr    147 embryo 10-12hr    1004 embryo 12-14hr    1151 embryo 14-16hr    5619 embryo 16-18hr    6023 embryo 18-20hr    5476 embryo 20-22hr    2135 embryo 22-24hr    1835 larva L1    2147 larva L2    3168 larva L3 12hr old    2374 larva L3 puffstage 1-2    2574 larva L3 puffstage 3-6    2138 larva L3 puffstage 7-9    1023 white prepupae new    193 white prepupae 12hr    16 white prepupae 24hr    16 pupae 2d postWPP    39 pupae 3d postWPP    36 pupae 4d postWPP    101 adult male 01day    225 adult male 05day    285 adult male 30day    409 adult female 01day    199 adult female 05day    97 adult female 30day    177 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High  Linear, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    21 embryo 02-04hr    31 embryo 04-06hr    42 embryo 06-08hr    60 embryo 08-10hr  (147) embryo 10-12hr  (1004) embryo 12-14hr  (1151) embryo 14-16hr  (5619) embryo 16-18hr  (6023) embryo 18-20hr  (5476) embryo 20-22hr  (2135) embryo 22-24hr  (1835) larva L1  (2147) larva L2  (3168) larva L3 12hr old  (2374) larva L3 puffstage 1-2  (2574) larva L3 puffstage 3-6  (2138) larva L3 puffstage 7-9  (1023) white prepupae new  (193) white prepupae 12hr    16 white prepupae 24hr    16 pupae 2d postWPP    39 pupae 3d postWPP    36 pupae 4d postWPP  101 adult male 01day  (225) adult male 05day  (285) adult male 30day  (409) adult female 01day  (199) adult female 05day    97 adult female 30day  (177) Expression Level Scale  None   Extremely low   Very low   Low  Linear, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    21 embryo 02-04hr    31 embryo 04-06hr    42 embryo 06-08hr    60 embryo 08-10hr    147 embryo 10-12hr    1004 embryo 12-14hr    1151 embryo 14-16hr  (5619) embryo 16-18hr  (6023) embryo 18-20hr  (5476) embryo 20-22hr  (2135) embryo 22-24hr  (1835) larva L1  (2147) larva L2  (3168) larva L3 12hr old  (2374) larva L3 puffstage 1-2  (2574) larva L3 puffstage 3-6  (2138) larva L3 puffstage 7-9    1023 white prepupae new    193 white prepupae 12hr    16 white prepupae 24hr    16 pupae 2d postWPP    39 pupae 3d postWPP    36 pupae 4d postWPP    101 adult male 01day    225 adult male 05day    285 adult male 30day    409 adult female 01day    199 adult female 05day    97 adult female 30day    177 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  Linear, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    21 embryo 02-04hr    31 embryo 04-06hr    42 embryo 06-08hr    60 embryo 08-10hr    147 embryo 10-12hr    1004 embryo 12-14hr    1151 embryo 14-16hr    5619 embryo 16-18hr    6023 embryo 18-20hr    5476 embryo 20-22hr    2135 embryo 22-24hr    1835 larva L1    2147 larva L2    3168 larva L3 12hr old    2374 larva L3 puffstage 1-2    2574 larva L3 puffstage 3-6    2138 larva L3 puffstage 7-9    1023 white prepupae new    193 white prepupae 12hr    16 white prepupae 24hr    16 pupae 2d postWPP    39 pupae 3d postWPP    36 pupae 4d postWPP    101 adult male 01day    225 adult male 05day    285 adult male 30day    409 adult female 01day    199 adult female 05day    97 adult female 30day    177 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  Linear, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    21 embryo 02-04hr    31 embryo 04-06hr    42 embryo 06-08hr    60 embryo 08-10hr    147 embryo 10-12hr    1004 embryo 12-14hr    1151 embryo 14-16hr    5619 embryo 16-18hr    6023 embryo 18-20hr    5476 embryo 20-22hr    2135 embryo 22-24hr    1835 larva L1    2147 larva L2    3168 larva L3 12hr old    2374 larva L3 puffstage 1-2    2574 larva L3 puffstage 3-6    2138 larva L3 puffstage 7-9    1023 white prepupae new    193 white prepupae 12hr    16 white prepupae 24hr    16 pupae 2d postWPP    39 pupae 3d postWPP    36 pupae 4d postWPP    101 adult male 01day    225 adult male 05day    285 adult male 30day    409 adult female 01day    199 adult female 05day    97 adult female 30day    177 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  log, scaled to maximum FBgn0035325 expression level Developmental Stage   Expression Level embryo 00-02hr    21 embryo 02-04hr    31 embryo 04-06hr    42 embryo 06-08hr    60 embryo 08-10hr    147 embryo 10-12hr    1004 embryo 12-14hr    1151 embryo 14-16hr    5619 embryo 16-18hr    6023 embryo 18-20hr    5476 embryo 20-22hr    2135 embryo 22-24hr    1835 larva L1    2147 larva L2    3168 larva L3 12hr old    2374 larva L3 puffstage 1-2    2574 larva L3 puffstage 3-6    2138 larva L3 puffstage 7-9    1023 white prepupae new    193 white prepupae 12hr    16 white prepupae 24hr    16 pupae 2d postWPP    39 pupae 3d postWPP    36 pupae 4d postWPP    101 adult male 01day    225 adult male 05day    285 adult male 30day    409 adult female 01day    199 adult female 05day    97 adult female 30day    177 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Very low expression Developmental Stage   Expression Level embryo 00-02hr    21 embryo 02-04hr    31 embryo 04-06hr    42 embryo 06-08hr    60 embryo 08-10hr  (147) embryo 10-12hr  (1004) embryo 12-14hr  (1151) embryo 14-16hr  (5619) embryo 16-18hr  (6023) embryo 18-20hr  (5476) embryo 20-22hr  (2135) embryo 22-24hr  (1835) larva L1  (2147) larva L2  (3168) larva L3 12hr old  (2374) larva L3 puffstage 1-2  (2574) larva L3 puffstage 3-6  (2138) larva L3 puffstage 7-9  (1023) white prepupae new  (193) white prepupae 12hr    16 white prepupae 24hr    16 pupae 2d postWPP    39 pupae 3d postWPP    36 pupae 4d postWPP  101 adult male 01day  (225) adult male 05day  (285) adult male 30day  (409) adult female 01day  (199) adult female 05day    97 adult female 30day  (177) Expression Level Scale  None   Extremely low   Very low   Low  log, scaled to Moderate expression Developmental Stage   Expression Level embryo 00-02hr    21 embryo 02-04hr    31 embryo 04-06hr    42 embryo 06-08hr    60 embryo 08-10hr    147 embryo 10-12hr    1004 embryo 12-14hr    1151 embryo 14-16hr  (5619) embryo 16-18hr  (6023) embryo 18-20hr  (5476) embryo 20-22hr  2135 embryo 22-24hr  1835 larva L1  2147 larva L2  (3168) larva L3 12hr old  2374 larva L3 puffstage 1-2  (2574) larva L3 puffstage 3-6  2138 larva L3 puffstage 7-9    1023 white prepupae new    193 white prepupae 12hr    16 white prepupae 24hr    16 pupae 2d postWPP    39 pupae 3d postWPP    36 pupae 4d postWPP    101 adult male 01day    225 adult male 05day    285 adult male 30day    409 adult female 01day    199 adult female 05day    97 adult female 30day    177 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high  log, scaled to High expression Developmental Stage   Expression Level embryo 00-02hr    21 embryo 02-04hr    31 embryo 04-06hr    42 embryo 06-08hr    60 embryo 08-10hr    147 embryo 10-12hr    1004 embryo 12-14hr    1151 embryo 14-16hr    5619 embryo 16-18hr    6023 embryo 18-20hr    5476 embryo 20-22hr    2135 embryo 22-24hr    1835 larva L1    2147 larva L2    3168 larva L3 12hr old    2374 larva L3 puffstage 1-2    2574 larva L3 puffstage 3-6    2138 larva L3 puffstage 7-9    1023 white prepupae new    193 white prepupae 12hr    16 white prepupae 24hr    16 pupae 2d postWPP    39 pupae 3d postWPP    36 pupae 4d postWPP    101 adult male 01day    225 adult male 05day    285 adult male 30day    409 adult female 01day    199 adult female 05day    97 adult female 30day    177 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high  log, scaled to Extremely high expression Developmental Stage   Expression Level embryo 00-02hr    21 embryo 02-04hr    31 embryo 04-06hr    42 embryo 06-08hr    60 embryo 08-10hr    147 embryo 10-12hr    1004 embryo 12-14hr    1151 embryo 14-16hr    5619 embryo 16-18hr    6023 embryo 18-20hr    5476 embryo 20-22hr    2135 embryo 22-24hr    1835 larva L1    2147 larva L2    3168 larva L3 12hr old    2374 larva L3 puffstage 1-2    2574 larva L3 puffstage 3-6    2138 larva L3 puffstage 7-9    1023 white prepupae new    193 white prepupae 12hr    16 white prepupae 24hr    16 pupae 2d postWPP    39 pupae 3d postWPP    36 pupae 4d postWPP    101 adult male 01day    225 adult male 05day    285 adult male 30day    409 adult female 01day    199 adult female 05day    97 adult female 30day    177 Expression Level Scale  None   Extremely low   Very low   Low   Moderate   Moderately high   High   Very high   Extremely high  Heatmap Developmental Stage   Expression Level embryo 00-02hr     embryo 02-04hr     embryo 04-06hr     embryo 06-08hr     embryo 08-10hr     embryo 10-12hr     embryo 12-14hr     embryo 14-16hr     embryo 16-18hr     embryo 18-20hr     embryo 20-22hr     embryo 22-24hr     larva L1     larva L2     larva L3 12hr old     larva L3 puffstage 1-2     larva L3 puffstage 3-6     larva L3 puffstage 7-9     white prepupae new     white prepupae 12hr     white prepupae 24hr     pupae 2d postWPP     pupae 3d postWPP     pupae 4d postWPP     adult male 01day     adult male 05day     adult male 30day     adult female 01day     adult female 05day     adult female 30day     FlyAtlas Anatomical Expression Data for FBgn0035325    Styles Linear Logarithmic Heatmap Back-to-back    Scales max expr for FBgn0035325 Moderate expression bin max High level expression bin max Very high expression bin max Summary of FlyAtlas Anatomical Expression Data: Expression at high levels in the following post-embryonic organs or tissues: larval midgut. Expression at moderate levels in the following post-embryonic organs or tissues: adult midgut. [download data (TSV)] Guide to FlyAtlas expression level colors   No expression (0 - 9.999)   Low expression (10 - 99.999)   Moderate expression (100 - 499.999)   High level expression (500 - 999.999)   Very high expression (1000 - 25000) Linear, scaled to maximum FBgn0035325 expression level Tissue   Expression Level Larval Central Nervous System    6.65 Larval Midgut    1371.2 Larval Hindgut    22.3 Larval Malpighian Tubules    69.6 Larval Fat Body no informative data Larval Salivary Gland    9.2 Larval Trachea    4.875 Larval Carcass    7.325 Adult Head    8.1 Adult Eye    2.1 Adult Brain    1.4 Adult Thoracic-Abdominal Ganglion    8.3 Adult Crop no informative data Adult Midgut    224.7 Adult Hindgut    5 Adult Malpighian Tubules    5.2 Adult Fat Body    5.5 Adult Salivary Gland no informative data Adult Heart    2.575 Adult VirginFemale Spermatheca    4.9 Adult InseminatedFemale Spermatheca    4.6 Adult Ovary    5.1 Adult Testis    30.1 Adult Male Accessory Gland    17.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    6.65 Larval Midgut  (1371.2) Larval Hindgut    22.3 Larval Malpighian Tubules    69.6 Larval Fat Body no informative data Larval Salivary Gland    9.2 Larval Trachea    4.875 Larval Carcass    7.325 Adult Head    8.1 Adult Eye    2.1 Adult Brain    1.4 Adult Thoracic-Abdominal Ganglion    8.3 Adult Crop no informative data Adult Midgut    224.7 Adult Hindgut    5 Adult Malpighian Tubules    5.2 Adult Fat Body    5.5 Adult Salivary Gland no informative data Adult Heart    2.575 Adult VirginFemale Spermatheca    4.9 Adult InseminatedFemale Spermatheca    4.6 Adult Ovary    5.1 Adult Testis    30.1 Adult Male Accessory Gland    17.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  Linear, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    6.65 Larval Midgut  (1371.2) Larval Hindgut    22.3 Larval Malpighian Tubules    69.6 Larval Fat Body no informative data Larval Salivary Gland    9.2 Larval Trachea    4.875 Larval Carcass    7.325 Adult Head    8.1 Adult Eye    2.1 Adult Brain    1.4 Adult Thoracic-Abdominal Ganglion    8.3 Adult Crop no informative data Adult Midgut    224.7 Adult Hindgut    5 Adult Malpighian Tubules    5.2 Adult Fat Body    5.5 Adult Salivary Gland no informative data Adult Heart    2.575 Adult VirginFemale Spermatheca    4.9 Adult InseminatedFemale Spermatheca    4.6 Adult Ovary    5.1 Adult Testis    30.1 Adult Male Accessory Gland    17.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Linear, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    6.65 Larval Midgut    1371.2 Larval Hindgut    22.3 Larval Malpighian Tubules    69.6 Larval Fat Body no informative data Larval Salivary Gland    9.2 Larval Trachea    4.875 Larval Carcass    7.325 Adult Head    8.1 Adult Eye    2.1 Adult Brain    1.4 Adult Thoracic-Abdominal Ganglion    8.3 Adult Crop no informative data Adult Midgut    224.7 Adult Hindgut    5 Adult Malpighian Tubules    5.2 Adult Fat Body    5.5 Adult Salivary Gland no informative data Adult Heart    2.575 Adult VirginFemale Spermatheca    4.9 Adult InseminatedFemale Spermatheca    4.6 Adult Ovary    5.1 Adult Testis    30.1 Adult Male Accessory Gland    17.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to maximum FBgn0035325 expression level Tissue   Expression Level Larval Central Nervous System    6.65 Larval Midgut    1371.2 Larval Hindgut    22.3 Larval Malpighian Tubules    69.6 Larval Fat Body no informative data Larval Salivary Gland    9.2 Larval Trachea    4.875 Larval Carcass    7.325 Adult Head    8.1 Adult Eye    2.1 Adult Brain    1.4 Adult Thoracic-Abdominal Ganglion    8.3 Adult Crop no informative data Adult Midgut    224.7 Adult Hindgut    5 Adult Malpighian Tubules    5.2 Adult Fat Body    5.5 Adult Salivary Gland no informative data Adult Heart    2.575 Adult VirginFemale Spermatheca    4.9 Adult InseminatedFemale Spermatheca    4.6 Adult Ovary    5.1 Adult Testis    30.1 Adult Male Accessory Gland    17.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Moderate expression Tissue   Expression Level Larval Central Nervous System    6.65 Larval Midgut  (1371.2) Larval Hindgut    22.3 Larval Malpighian Tubules    69.6 Larval Fat Body no informative data Larval Salivary Gland    9.2 Larval Trachea    4.875 Larval Carcass    7.325 Adult Head    8.1 Adult Eye    2.1 Adult Brain    1.4 Adult Thoracic-Abdominal Ganglion    8.3 Adult Crop no informative data Adult Midgut    224.7 Adult Hindgut    5 Adult Malpighian Tubules    5.2 Adult Fat Body    5.5 Adult Salivary Gland no informative data Adult Heart    2.575 Adult VirginFemale Spermatheca    4.9 Adult InseminatedFemale Spermatheca    4.6 Adult Ovary    5.1 Adult Testis    30.1 Adult Male Accessory Gland    17.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High  log, scaled to High level expression Tissue   Expression Level Larval Central Nervous System    6.65 Larval Midgut  1371.2 Larval Hindgut    22.3 Larval Malpighian Tubules    69.6 Larval Fat Body no informative data Larval Salivary Gland    9.2 Larval Trachea    4.875 Larval Carcass    7.325 Adult Head    8.1 Adult Eye    2.1 Adult Brain    1.4 Adult Thoracic-Abdominal Ganglion    8.3 Adult Crop no informative data Adult Midgut    224.7 Adult Hindgut    5 Adult Malpighian Tubules    5.2 Adult Fat Body    5.5 Adult Salivary Gland no informative data Adult Heart    2.575 Adult VirginFemale Spermatheca    4.9 Adult InseminatedFemale Spermatheca    4.6 Adult Ovary    5.1 Adult Testis    30.1 Adult Male Accessory Gland    17.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  log, scaled to Very high expression Tissue   Expression Level Larval Central Nervous System    6.65 Larval Midgut    1371.2 Larval Hindgut    22.3 Larval Malpighian Tubules    69.6 Larval Fat Body no informative data Larval Salivary Gland    9.2 Larval Trachea    4.875 Larval Carcass    7.325 Adult Head    8.1 Adult Eye    2.1 Adult Brain    1.4 Adult Thoracic-Abdominal Ganglion    8.3 Adult Crop no informative data Adult Midgut    224.7 Adult Hindgut    5 Adult Malpighian Tubules    5.2 Adult Fat Body    5.5 Adult Salivary Gland no informative data Adult Heart    2.575 Adult VirginFemale Spermatheca    4.9 Adult InseminatedFemale Spermatheca    4.6 Adult Ovary    5.1 Adult Testis    30.1 Adult Male Accessory Gland    17.4 Adult Carcass no informative data Expression Level Scale  None   Low   Moderate   High   Very high  Heatmap Tissue   Expression Level Larval Central Nervous System     Larval Midgut     Larval Hindgut     Larval Malpighian Tubules     Larval Fat Body no informative data Larval Salivary Gland     Larval Trachea     Larval Carcass     Adult Head     Adult Eye     Adult Brain     Adult Thoracic-Abdominal Ganglion     Adult Crop no informative data Adult Midgut     Adult Hindgut     Adult Malpighian Tubules     Adult Fat Body     Adult Salivary Gland no informative data Adult Heart     Adult VirginFemale Spermatheca     Adult InseminatedFemale Spermatheca     Adult Ovary     Adult Testis     Adult Male Accessory Gland     Adult Carcass no informative data FlyAtlas Organ/Tissue Expression, larval vs. adult Larval Expression Level Tissue Adult Expression Level   NA  Head    8.1   NA  Eye    2.1   NA  Brain    1.4   6.65  Central Nervous System    NA   NA  Thoracic-Abdominal Ganglion    8.3   NA  Crop    no informative data   1371.2  Midgut    224.7   22.3  Hindgut    5   69.6  Malpighian Tubules    5.2   no informative data  Fat Body    5.5   9.2  Salivary Gland    no informative data   NA  Heart    2.575   4.875  Trachea    NA   NA  VirginFemale Spermatheca    4.9   NA  InseminatedFemale Spermatheca    4.6   NA  Ovary    5.1   NA  Testis    30.1   NA  Male Accessory Gland    17.4   7.325  Carcass    no informative data modENCODE Temporal Expression Data (Graveley et al., 2011) FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)
Expression Clusters
	A cluster of genes with similar mRNA expression dynamics across development. (The modENCODE Consortium, 2010) mE2_34_mRNA_expression_cluster_09
External Data & Images
Linkouts	FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035325 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG13806-RA FlyExpress - Embryonic expression images (BDGP data) • Show all FlyExpress processed images for CG13806 Stages(s) 1-3 Stages(s) 4-6 Stages(s) 13-16
Alleles & Phenotypes
Summary of Allele Phenotypes
Lethality Allele viable, with Scer\GAL4pnr-MD237 CG13806GD2262 Other Phenotypes Allele visible, with Scer\GAL4pnr-MD237 CG13806GD2262 Phenotype manifest in Allele trichogen cell, with Scer\GAL4pnr-MD237 CG13806GD2262
Classical Alleles ( 0 )
For All Classical Alleles Show
Allele of CG13806 Class Mutagen Stocks Known lesion
Alleles Carried on Transgenic Constructs ( 3 )
For All Alleles Carried on Transgenic Constructs Show
Allele of CG13806 Class Mutagen Stocks Known lesion CG13806GD2262 in vitro construct - RNAi in vitro construct - regulatory fusion 2 Yes CG13806tE5 in vitro construct - genomic fragment 0 Yes CG13806tS4 in vitro construct - genomic fragment 0 Yes
Aneuploid Aberrations
Transgenic Constructs & Insertions
Transgenic Constructs
	Type of construct Name Expression data UAS construct P{GD2262} NA
Insertions
	Type of insertions Name Expression data
Gene Ontology: Function, Process & Cellular Component ( 3 unique terms )
Terms Based on Experimental Evidence ( 0 terms )
Terms Based on Predictions or Assertions ( 3 terms )
Molecular Function
CV term Evidence References
chitin binding inferred from electronic annotation with InterPro:IPR002557 (FlyBase Curators et al., 2004-)
Biological Process
CV term Evidence References
chitin metabolic process inferred from electronic annotation with InterPro:IPR002557 (FlyBase Curators et al., 2004-)
Cellular Component
CV term Evidence References
extracellular region inferred from electronic annotation with InterPro:IPR002557 (FlyBase Curators et al., 2004-)
Sequence Ontology: Class of Gene
	nuclear_gene   protein_coding_gene
Interactions & Pathways
Summary of Physical Interactions
Protein-protein
Interacting group Assay References
Summary of Genetic Interactions
Interacts with	Please look at the allele data for full details of the genetic interactions CG13806 allele Gene References
External Data
Linkouts	BioGRID - A database of protein and genetic interactions • 63807 DroID - A comprehensive database of gene and protein interactions. • FBgn0035325 InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38292
Orthologs
Genome-wide drosophilid orthologs	Dana\GF24908 Dere\GG14852 Dgri\GH16470 Dmoj\GI12142 Dper\GL24644 Dpse\GA12542 Dsec\GM14477 Dsim\GD13674 Dvir\GJ13421 Dwil\GK12631 Dyak\GE20309
Curated drosophilid orthologs	Dpse\GA12542
Linkouts	InParanoid A subset of ortholog calls from InParanoid. • AAEL012642-PA Aedes aegypti (mosquito) AAEL012649-PA Aedes aegypti (mosquito) AGAP004851-PA Anopheles gambiae (mosquito) CPIJ013626 Culex pipens (mosquito) XP_971761.1 Tribolium castaneum (red flour beetle) OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0237627 FBgn0214640 FBgn0200646 FBgn0185382 FBgn0169400 FBgn0072588 FBgn0162232 FBgn0134899 FBgn0123941 FBgn0107107 FBgn0101900 CPIJ004731 CPIJ013626 CPIJ014190 AGAP004851 AGAP000647 AAEL015254 AAEL012652 AAEL012642 GLEAN_05469 GLEAN_05468
Stocks & Reagents
Stocks Listed in FlyBase ( 2 )
VDRC	v7446 w1118; P{GD2262}v7446 v7448 w1118; P{GD2262}v7448
Genomic Clones ( 1 )
	BACR22J16 Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete
cDNA Clones ( 6 )
	Please Note This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.
cDNA Clones, Fully Sequenced
BDGP DGC clones	RE09177
Other clones
cDNA Clones, End Sequenced (ESTs)
BDGP DGC clones	RE08126 RH48750 RH53894
Other clones	FGC024F05 FGM234C06
RNAi & Array Information
Linkouts	DRSC - Results from RNAi screens. • FBgn0035325 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38292
Antibody Information
Other Information
Discoverer
Etymology
Identification
Relationship to Other Genes
Source for database identity of
Source for database merge of
Additional comments
Other Comments
External Crossreferences & Linkouts
Sequence Crossreferences
	RefSeq (Transcripts) • NM_139451 RefSeq (Proteins) • NP_647708 DDBJ / EMBL / GenBank • AAF47629 AAL90310 AY089572 BI168447 Entrez Gene - A searchable database of RefSeq genes. • 38292 UniProtKB/TrEMBL • Q8SXL5
Other Crossreferences
	InterPro domains - A database of protein families, domains, and functional sites • Chitin binding domain (IPR002557)
Linkouts
	BioGRID - A database of protein and genetic interactions • 63807 DroID - A comprehensive database of gene and protein interactions. • FBgn0035325 DRSC - Results from RNAi screens. • FBgn0035325 FLIGHT - Cell culture data for RNAi and other high-throughput technologies • FBgn0035325 FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array • CG13806-RA FlyMine - Integrated genomics database for Drosophila, Anopheles, and C.elegans • FBgn0035325 GenomeRNAi - GenomeRNAi – A database for cell-based and in vivo RNAi phenotypes and reagents • 38292 InParanoid A subset of ortholog calls from InParanoid. • AAEL012642-PA Aedes aegypti (mosquito) AAEL012649-PA Aedes aegypti (mosquito) AGAP004851-PA Anopheles gambiae (mosquito) CPIJ013626 Culex pipens (mosquito) XP_971761.1 Tribolium castaneum (red flour beetle) InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets. • 38292 modMine - Data generated by the modENCODE project. • FBgn0035325 OrthoDB (Arthropod subset) The hierarchical catalog of eukaryotic orthologs. • FBgn0237627 FBgn0214640 FBgn0200646 FBgn0185382 FBgn0169400 FBgn0072588 FBgn0162232 FBgn0134899 FBgn0123941 FBgn0107107 FBgn0101900 CPIJ004731 CPIJ013626 CPIJ014190 AGAP004851 AGAP000647 AAEL015254 AAEL012652 AAEL012642 GLEAN_05469 GLEAN_05468
Synonyms & Secondary IDs ( 1 )
Reported As
Symbol Synonym	CG13806
Name Synonym
Secondary FlyBase IDs
References ( 11 )
Research paper	Gaziova et al., 2004, Development 131(11): 2715--2725 Cell-autonomous roles of the ecdysoneless gene in Drosophila development and oogenesis. [FBrf0179218]
Supplementary material	The modENCODE Consortium, 2010, Science 330(6012): DataS14: Gene co-expression clusters. [FBrf0213979] Mummery-Widmer et al., 2009, Nature 458(7241): Supplementary Table 2 - Genome-wide bristle screen results. [FBrf0214518] Giot et al., 2003, Science 302(5651): Tables S1 to S7. [FBrf0166452]
Personal communication to FlyBase	Dickson et al., 2007.7.18, RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center RNAi construct and insertion data submitted by the Vienna Drosophila RNAi Center [FBrf0200327] FlyBase Curators et al., 2004-, Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. Gene Ontology annotation in FlyBase through association of InterPro records with GO terms. [FBrf0174215]
FlyBase analysis	FlyBase, 1992-, FlyBase curation FlyBase curation. [FBrf0105495]
Computer file	BDGP Project Members, 2000-, Berkeley Drosophila Genome Project. Berkeley Drosophila Genome Project. [FBrf0125078]
Automatic genome annotation	FamiliarityBreedsContempt, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126705]
Curated genome annotation	Milshina, 1999.11, [Annotations performed at the Celera Jamboreee.] [Annotations performed at the Celera Jamboreee.] [FBrf0126686]