Gene Dmel\CG33232

FlyGene Wiki Help Close All Open All

General Information

Symbol

Dmel\CG33232

Species

D. melanogaster

Name

Annotation symbol

CG33232

Feature type

protein_coding_gene

FlyBase ID

FBgn0035347

Gene Model Status

Current

Stock availability

15 publicly available

Also Known As

CG1141

Genomic Location

Chromosome (arm)

Recombination map

Cytogenetic map

62E2-62E4

Sequence location

3L:2,466,903..2,499,226 [+]

Genomic Maps

Select View:

Summary Information

Automatically generated summary

See sections below for more information

This gene is referred to in FlyBase by the symbol Dmel\CG33232 (FBgn0035347). It is a protein_coding_gene from Drosophila melanogaster. Based on sequence similarity, it is predicted to have molecular function: actin binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process: cytoskeleton organization. 15 alleles are reported. No phenotypic data is available. It has 5 annotated transcripts and 5 annotated polypeptides. Protein features are: Supervillin; Villin headpiece; Villin/Gelsolin. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, during late larval stages, at stages throughout the pupal period. Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression in all larval and adult organs/tissues ranges from low to undetected. Expression at high levels in the following post-embryonic organs or tissues: adult crop. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval central nervous system, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass. Gene sequence location is 3L:2466903..2499226.

User Contributed Data

Beta version, feedback welcome

Recent Updates

Description

What does this section display?

This section contains items that were added to this record for each release. It currently only tracks new links between this FlyBase report and other FlyBase data classes (e.g. genes, references, stocks) or controlled vocabulary terms (e.g. GO, anatomy terms).

What does this section not display?

This section does not currently display links that were removed or gene model changes.

Update Feed

Click the icon below to subscribe to this FlyBase record and receive updates automatically through your feed reader.

FB2013_03

FB2013_02

All updates

Click here to see a list of all updates to this record from FB2010_08 and on.

Detailed Mapping Data

FlyBase Computed Cytological Location

Cytogenetic map

Evidence for location

62E2-62E4

Experimentally Determined Cytological Location

Cytogenetic map

Notes

References

Experimentally Determined Recombination Data

Location

Left of (cM)

Right of (cM)

Notes

Gene Model & Products

Please see the GBrowse view of Dmel\CG33232 for information on other features

To submit a correction to a gene model please use the Contact FlyBase form

Comments on Gene Model

Gene merge based on EST data

Gene model reviewed during 5.44

DGC clone appears problematic: incomplete CDS (SD07766)

Low-frequency junction(s) not annotated.

Transcript Data

Annotated Transcripts

Name

FlyBase ID

RefSeq ID

Length (nt)

Associated CDS (aa)

CG33232-RA

FBtr0072918

NM_206246

4400

1266

CG33232-RB

FBtr0072919

NM_206245

4413

1156

CG33232-RC

FBtr0072920

NM_206244

4425

1156

CG33232-RD

FBtr0100539

NM_001031933

4696

1156

CG33232-RE

FBtr0331413

NM_001274400

4127

1111

Additional Transcript Data & Comments

Reported size (kB)

Comments

External Data

Crossreferences

Polypeptide Data

Annotated Polypeptides

Name

FlyBase ID

Predicted MW (kDa)

Length (aa)

Theoretical pI

RefSeq ID

GenBank protein

CG33232-PA

FBpp0072795

142.7

1266

6.95

NP_995968

AAS64939

CG33232-PB

FBpp0072796

131.1

1156

6.62

NP_995967

AAS64940

CG33232-PC

FBpp0072797

131.1

1156

6.62

NP_995966

AAF47652

CG33232-PD

FBpp0099984

131.1

1156

6.62

NP_001027104

AAZ66052

CG33232-PE

FBpp0303830

126.0

1111

6.63

NP_001261329

AGB94024

Additional Polypeptide Data & Comments

Reported size (kDa)

Comments

External Data

Linkouts

Crossreferences

InterPro domains - A database of protein families, domains, and functional sites

•

Villin headpiece (IPR003128)

Villin/Gelsolin (IPR007122)

Supervillin (IPR015628)

Sequences Consistent with the Gene Model

DDBJ /
EMBL /
GenBank

DNA sequence

Protein sequence

Name

Mapped Features

Mapped Features have been reorganized, please see this article for details.

Additional mapped features and mutations can be found on GBrowse or related reports.

Type

Symbol & Location

Additional Notes

References

External Data

Linkouts

Crossreferences

Expression Data

Transcript Expression

Additional Descriptive Data

Marker for

Subcellular Localization

CV Term

Polypeptide Expression

Additional Descriptive Data

Marker for

Subcellular Localization (GO Cellular Component)

CV term

Evidence

References

Expression Deduced from Reporters

High-Throughput Expression Data

Associated Tools

Reference

See Gelbart and Emmert, 2010.10.13 for analysis details and data files for all genes.

FlyAtlas Anatomy Microarray

FlyAtlas Anatomical Expression Data

(FlyAtlas-RNA.adult)

(FlyAtlas-RNA.larva)

	Styles
	Linear
	Logarithmic
	Heatmap
	Back-to-back
	Scales
	gene max expression
	Moderate expression bin max
	High level expression bin max
	Very high expression bin max

Summary of FlyAtlas Anatomical Expression Data: Two or more Affy2 ProbeSets identify exons of this gene. This is a summary of the tissue expression peaks exhibited in at least one of these ProbeSets. Expression in all larval and adult organs/tissues ranges from low to undetected. Expression at high levels in the following post-embryonic organs or tissues: adult crop. Expression at moderate levels in the following post-embryonic organs or tissues: adult head, adult eye, larval central nervous system, larval/adult midgut, larval/adult hindgut, larval/adult Malpighian tubules, adult heart, adult salivary gland, larval trachea, adult female reproductive system, adult male reproductive system, larval/adult carcass.
[download data (TSV)]

Guide to FlyAtlas expression level colors
	No expression (0 - 9.999)
	Low expression (10 - 99.999)
	Moderate expression (100 - 499.999)
	High level expression (500 - 999.999)
	Very high expression (>999.999)

Heatmap
Tissue		Expression Level
Larval Central Nervous System
Larval Midgut
Larval Hindgut
Larval Malpighian Tubules
Larval Fat Body
Larval Salivary Gland
Larval Trachea
Larval Carcass
Adult Head
Adult Eye
Adult Brain
Adult Thoracic-Abdominal Ganglion
Adult Crop
Adult Midgut
Adult Hindgut
Adult Malpighian Tubules
Adult Fat Body
Adult Salivary Gland
Adult Heart
Adult VirginFemale Spermatheca
Adult InseminatedFemale Spermatheca
Adult Ovary
Adult Testis
Adult Male Accessory Gland
Adult Carcass

FlyAtlas Anatomical Expression Data (Chintapalli et al., 2007)

modENCODE Anatomy RNA-Seq

modENCODE Tissue Expression Data

(modENCODE_mRNA-Seq_tissues)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		25
central nervous system, larvae L3		32
central nervous system, pupae P8		16
head, virgin 1-day female		10
head, virgin 4-day female		11
head, virgin 20-day female		12
head, mated 1-day female		11
head, mated 4-day female		10
head, mated 20-day female		11
head, mated 1-day male		17
head, mated 4-day male		14
head, mated 20-day male		18
salivary gland, larvae L3 wandering		20
salivary gland, white prepupae		130
digestive system, larvae L3 wandering		55
digestive system, 1-day adult		19
digestive system, 4-day adult		18
digestive system, 20-day adult		27
fat body, larvae L3 wandering		2
fat body, white prepupae		11
fat body, pupae P8		19
carcass, larvae L3 wandering		26
carcass, 1-day adult		11
carcass, 4-day adult		11
carcass, 20-day adult		13
ovary, virgin 4-day female		9
ovary, mated 4-day female		8
testis, mated 4-day male		51
accessory gland, mated 4-day male		11
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		25
central nervous system, larvae L3		(32)
central nervous system, pupae P8		16
head, virgin 1-day female		10
head, virgin 4-day female		11
head, virgin 20-day female		12
head, mated 1-day female		11
head, mated 4-day female		10
head, mated 20-day female		11
head, mated 1-day male		17
head, mated 4-day male		14
head, mated 20-day male		18
salivary gland, larvae L3 wandering		20
salivary gland, white prepupae		(130)
digestive system, larvae L3 wandering		(55)
digestive system, 1-day adult		19
digestive system, 4-day adult		18
digestive system, 20-day adult		(27)
fat body, larvae L3 wandering		2
fat body, white prepupae		11
fat body, pupae P8		19
carcass, larvae L3 wandering		26
carcass, 1-day adult		11
carcass, 4-day adult		11
carcass, 20-day adult		13
ovary, virgin 4-day female		9
ovary, mated 4-day female		8
testis, mated 4-day male		(51)
accessory gland, mated 4-day male		11
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		25
central nervous system, larvae L3		32
central nervous system, pupae P8		16
head, virgin 1-day female		10
head, virgin 4-day female		11
head, virgin 20-day female		12
head, mated 1-day female		11
head, mated 4-day female		10
head, mated 20-day female		11
head, mated 1-day male		17
head, mated 4-day male		14
head, mated 20-day male		18
salivary gland, larvae L3 wandering		20
salivary gland, white prepupae		(130)
digestive system, larvae L3 wandering		55
digestive system, 1-day adult		19
digestive system, 4-day adult		18
digestive system, 20-day adult		27
fat body, larvae L3 wandering		2
fat body, white prepupae		11
fat body, pupae P8		19
carcass, larvae L3 wandering		26
carcass, 1-day adult		11
carcass, 4-day adult		11
carcass, 20-day adult		13
ovary, virgin 4-day female		9
ovary, mated 4-day female		8
testis, mated 4-day male		51
accessory gland, mated 4-day male		11
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		25
central nervous system, larvae L3		32
central nervous system, pupae P8		16
head, virgin 1-day female		10
head, virgin 4-day female		11
head, virgin 20-day female		12
head, mated 1-day female		11
head, mated 4-day female		10
head, mated 20-day female		11
head, mated 1-day male		17
head, mated 4-day male		14
head, mated 20-day male		18
salivary gland, larvae L3 wandering		20
salivary gland, white prepupae		130
digestive system, larvae L3 wandering		55
digestive system, 1-day adult		19
digestive system, 4-day adult		18
digestive system, 20-day adult		27
fat body, larvae L3 wandering		2
fat body, white prepupae		11
fat body, pupae P8		19
carcass, larvae L3 wandering		26
carcass, 1-day adult		11
carcass, 4-day adult		11
carcass, 20-day adult		13
ovary, virgin 4-day female		9
ovary, mated 4-day female		8
testis, mated 4-day male		51
accessory gland, mated 4-day male		11
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Tissue		Expression Level
imaginal disc, larvae L3 wandering		25
central nervous system, larvae L3		32
central nervous system, pupae P8		16
head, virgin 1-day female		10
head, virgin 4-day female		11
head, virgin 20-day female		12
head, mated 1-day female		11
head, mated 4-day female		10
head, mated 20-day female		11
head, mated 1-day male		17
head, mated 4-day male		14
head, mated 20-day male		18
salivary gland, larvae L3 wandering		20
salivary gland, white prepupae		130
digestive system, larvae L3 wandering		55
digestive system, 1-day adult		19
digestive system, 4-day adult		18
digestive system, 20-day adult		27
fat body, larvae L3 wandering		2
fat body, white prepupae		11
fat body, pupae P8		19
carcass, larvae L3 wandering		26
carcass, 1-day adult		11
carcass, 4-day adult		11
carcass, 20-day adult		13
ovary, virgin 4-day female		9
ovary, mated 4-day female		8
testis, mated 4-day male		51
accessory gland, mated 4-day male		11
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Moderate expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		25
central nervous system, larvae L3		32
central nervous system, pupae P8		16
head, virgin 1-day female		10
head, virgin 4-day female		11
head, virgin 20-day female		12
head, mated 1-day female		11
head, mated 4-day female		10
head, mated 20-day female		11
head, mated 1-day male		17
head, mated 4-day male		14
head, mated 20-day male		18
salivary gland, larvae L3 wandering		20
salivary gland, white prepupae		(130)
digestive system, larvae L3 wandering		(55)
digestive system, 1-day adult		19
digestive system, 4-day adult		18
digestive system, 20-day adult		27
fat body, larvae L3 wandering		2
fat body, white prepupae		11
fat body, pupae P8		19
carcass, larvae L3 wandering		26
carcass, 1-day adult		11
carcass, 4-day adult		11
carcass, 20-day adult		13
ovary, virgin 4-day female		9
ovary, mated 4-day female		8
testis, mated 4-day male		(51)
accessory gland, mated 4-day male		11
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		25
central nervous system, larvae L3		32
central nervous system, pupae P8		16
head, virgin 1-day female		10
head, virgin 4-day female		11
head, virgin 20-day female		12
head, mated 1-day female		11
head, mated 4-day female		10
head, mated 20-day female		11
head, mated 1-day male		17
head, mated 4-day male		14
head, mated 20-day male		18
salivary gland, larvae L3 wandering		20
salivary gland, white prepupae		130
digestive system, larvae L3 wandering		55
digestive system, 1-day adult		19
digestive system, 4-day adult		18
digestive system, 20-day adult		27
fat body, larvae L3 wandering		2
fat body, white prepupae		11
fat body, pupae P8		19
carcass, larvae L3 wandering		26
carcass, 1-day adult		11
carcass, 4-day adult		11
carcass, 20-day adult		13
ovary, virgin 4-day female		9
ovary, mated 4-day female		8
testis, mated 4-day male		51
accessory gland, mated 4-day male		11
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Tissue		Expression Level
imaginal disc, larvae L3 wandering		25
central nervous system, larvae L3		32
central nervous system, pupae P8		16
head, virgin 1-day female		10
head, virgin 4-day female		11
head, virgin 20-day female		12
head, mated 1-day female		11
head, mated 4-day female		10
head, mated 20-day female		11
head, mated 1-day male		17
head, mated 4-day male		14
head, mated 20-day male		18
salivary gland, larvae L3 wandering		20
salivary gland, white prepupae		130
digestive system, larvae L3 wandering		55
digestive system, 1-day adult		19
digestive system, 4-day adult		18
digestive system, 20-day adult		27
fat body, larvae L3 wandering		2
fat body, white prepupae		11
fat body, pupae P8		19
carcass, larvae L3 wandering		26
carcass, 1-day adult		11
carcass, 4-day adult		11
carcass, 20-day adult		13
ovary, virgin 4-day female		9
ovary, mated 4-day female		8
testis, mated 4-day male		51
accessory gland, mated 4-day male		11
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Tissue		Expression Level
imaginal disc, larvae L3 wandering
central nervous system, larvae L3
central nervous system, pupae P8
head, virgin 1-day female
head, virgin 4-day female
head, virgin 20-day female
head, mated 1-day female
head, mated 4-day female
head, mated 20-day female
head, mated 1-day male
head, mated 4-day male
head, mated 20-day male
salivary gland, larvae L3 wandering
salivary gland, white prepupae
digestive system, larvae L3 wandering
digestive system, 1-day adult
digestive system, 4-day adult
digestive system, 20-day adult
fat body, larvae L3 wandering
fat body, white prepupae
fat body, pupae P8
carcass, larvae L3 wandering
carcass, 1-day adult
carcass, 4-day adult
carcass, 20-day adult
ovary, virgin 4-day female
ovary, mated 4-day female
testis, mated 4-day male
accessory gland, mated 4-day male

modENCODE Development RNA-Seq

modENCODE Temporal Expression Data

(modENCODE_mRNA-Seq_U)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages, during late larval stages, at stages throughout the pupal period.
[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		14
embryo 02-04hr		54
embryo 04-06hr		59
embryo 06-08hr		37
embryo 08-10hr		30
embryo 10-12hr		22
embryo 12-14hr		27
embryo 14-16hr		36
embryo 16-18hr		44
embryo 18-20hr		30
embryo 20-22hr		14
embryo 22-24hr		18
larva L1		11
larva L2		10
larva L3 12hr old		13
larva L3 puffstage 1-2		14
larva L3 puffstage 3-6		27
larva L3 puffstage 7-9		50
white prepupae new		55
white prepupae 12hr		53
white prepupae 24hr		54
pupae 2d postWPP		54
pupae 3d postWPP		39
pupae 4d postWPP		30
adult male 01day		39
adult male 05day		44
adult male 30day		45
adult female 01day		19
adult female 05day		14
adult female 30day		14
Expression Level Scale		Very low Low Moderate Moderately high High

Linear, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		14
embryo 02-04hr		(54)
embryo 04-06hr		(59)
embryo 06-08hr		(37)
embryo 08-10hr		(30)
embryo 10-12hr		22
embryo 12-14hr		(27)
embryo 14-16hr		(36)
embryo 16-18hr		(44)
embryo 18-20hr		(30)
embryo 20-22hr		14
embryo 22-24hr		18
larva L1		11
larva L2		10
larva L3 12hr old		13
larva L3 puffstage 1-2		14
larva L3 puffstage 3-6		(27)
larva L3 puffstage 7-9		(50)
white prepupae new		(55)
white prepupae 12hr		(53)
white prepupae 24hr		(54)
pupae 2d postWPP		(54)
pupae 3d postWPP		(39)
pupae 4d postWPP		(30)
adult male 01day		(39)
adult male 05day		(44)
adult male 30day		(45)
adult female 01day		19
adult female 05day		14
adult female 30day		14
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		14
embryo 02-04hr		54
embryo 04-06hr		59
embryo 06-08hr		37
embryo 08-10hr		30
embryo 10-12hr		22
embryo 12-14hr		27
embryo 14-16hr		36
embryo 16-18hr		44
embryo 18-20hr		30
embryo 20-22hr		14
embryo 22-24hr		18
larva L1		11
larva L2		10
larva L3 12hr old		13
larva L3 puffstage 1-2		14
larva L3 puffstage 3-6		27
larva L3 puffstage 7-9		50
white prepupae new		55
white prepupae 12hr		53
white prepupae 24hr		54
pupae 2d postWPP		54
pupae 3d postWPP		39
pupae 4d postWPP		30
adult male 01day		39
adult male 05day		44
adult male 30day		45
adult female 01day		19
adult female 05day		14
adult female 30day		14
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		14
embryo 02-04hr		54
embryo 04-06hr		59
embryo 06-08hr		37
embryo 08-10hr		30
embryo 10-12hr		22
embryo 12-14hr		27
embryo 14-16hr		36
embryo 16-18hr		44
embryo 18-20hr		30
embryo 20-22hr		14
embryo 22-24hr		18
larva L1		11
larva L2		10
larva L3 12hr old		13
larva L3 puffstage 1-2		14
larva L3 puffstage 3-6		27
larva L3 puffstage 7-9		50
white prepupae new		55
white prepupae 12hr		53
white prepupae 24hr		54
pupae 2d postWPP		54
pupae 3d postWPP		39
pupae 4d postWPP		30
adult male 01day		39
adult male 05day		44
adult male 30day		45
adult female 01day		19
adult female 05day		14
adult female 30day		14
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Developmental Stage		Expression Level
embryo 00-02hr		14
embryo 02-04hr		54
embryo 04-06hr		59
embryo 06-08hr		37
embryo 08-10hr		30
embryo 10-12hr		22
embryo 12-14hr		27
embryo 14-16hr		36
embryo 16-18hr		44
embryo 18-20hr		30
embryo 20-22hr		14
embryo 22-24hr		18
larva L1		11
larva L2		10
larva L3 12hr old		13
larva L3 puffstage 1-2		14
larva L3 puffstage 3-6		27
larva L3 puffstage 7-9		50
white prepupae new		55
white prepupae 12hr		53
white prepupae 24hr		54
pupae 2d postWPP		54
pupae 3d postWPP		39
pupae 4d postWPP		30
adult male 01day		39
adult male 05day		44
adult male 30day		45
adult female 01day		19
adult female 05day		14
adult female 30day		14
Expression Level Scale		Very low Low Moderate Moderately high High

log, scaled to Moderate expression
Developmental Stage		Expression Level
embryo 00-02hr		14
embryo 02-04hr		(54)
embryo 04-06hr		(59)
embryo 06-08hr		(37)
embryo 08-10hr		30
embryo 10-12hr		22
embryo 12-14hr		27
embryo 14-16hr		(36)
embryo 16-18hr		(44)
embryo 18-20hr		30
embryo 20-22hr		14
embryo 22-24hr		18
larva L1		11
larva L2		10
larva L3 12hr old		13
larva L3 puffstage 1-2		14
larva L3 puffstage 3-6		27
larva L3 puffstage 7-9		(50)
white prepupae new		(55)
white prepupae 12hr		(53)
white prepupae 24hr		(54)
pupae 2d postWPP		(54)
pupae 3d postWPP		(39)
pupae 4d postWPP		30
adult male 01day		(39)
adult male 05day		(44)
adult male 30day		(45)
adult female 01day		19
adult female 05day		14
adult female 30day		14
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Developmental Stage		Expression Level
embryo 00-02hr		14
embryo 02-04hr		54
embryo 04-06hr		59
embryo 06-08hr		37
embryo 08-10hr		30
embryo 10-12hr		22
embryo 12-14hr		27
embryo 14-16hr		36
embryo 16-18hr		44
embryo 18-20hr		30
embryo 20-22hr		14
embryo 22-24hr		18
larva L1		11
larva L2		10
larva L3 12hr old		13
larva L3 puffstage 1-2		14
larva L3 puffstage 3-6		27
larva L3 puffstage 7-9		50
white prepupae new		55
white prepupae 12hr		53
white prepupae 24hr		54
pupae 2d postWPP		54
pupae 3d postWPP		39
pupae 4d postWPP		30
adult male 01day		39
adult male 05day		44
adult male 30day		45
adult female 01day		19
adult female 05day		14
adult female 30day		14
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Developmental Stage		Expression Level
embryo 00-02hr		14
embryo 02-04hr		54
embryo 04-06hr		59
embryo 06-08hr		37
embryo 08-10hr		30
embryo 10-12hr		22
embryo 12-14hr		27
embryo 14-16hr		36
embryo 16-18hr		44
embryo 18-20hr		30
embryo 20-22hr		14
embryo 22-24hr		18
larva L1		11
larva L2		10
larva L3 12hr old		13
larva L3 puffstage 1-2		14
larva L3 puffstage 3-6		27
larva L3 puffstage 7-9		50
white prepupae new		55
white prepupae 12hr		53
white prepupae 24hr		54
pupae 2d postWPP		54
pupae 3d postWPP		39
pupae 4d postWPP		30
adult male 01day		39
adult male 05day		44
adult male 30day		45
adult female 01day		19
adult female 05day		14
adult female 30day		14
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Developmental Stage		Expression Level
embryo 00-02hr
embryo 02-04hr
embryo 04-06hr
embryo 06-08hr
embryo 08-10hr
embryo 10-12hr
embryo 12-14hr
embryo 14-16hr
embryo 16-18hr
embryo 18-20hr
embryo 20-22hr
embryo 22-24hr
larva L1
larva L2
larva L3 12hr old
larva L3 puffstage 1-2
larva L3 puffstage 3-6
larva L3 puffstage 7-9
white prepupae new
white prepupae 12hr
white prepupae 24hr
pupae 2d postWPP
pupae 3d postWPP
pupae 4d postWPP
adult male 01day
adult male 05day
adult male 30day
adult female 01day
adult female 05day
adult female 30day

modENCODE Temporal Expression Data (Graveley et al., 2011)

modENCODE Cell Lines RNA-Seq

modENCODE Cell Line Expression Data

(modENCODE_mRNA-Seq_cell.A)

(modENCODE_mRNA-Seq_cell.B)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Cell Line		Expression Level
Schneider line 2 S2R+		27
Schneider line 2 Sg4		2
embryonic 1182-4H		6
embryonic GM2		2
embryonic Kc167		3
embryonic S1		4
embryonic S3		2
leg disc CME L1		3
wing disc CME-W2		5
wing disc ML-DmD8		18
wing disc ML-DmD9		77
wing disc ML-DmD16-c3		11
wing disc ML-DmD21		5
wing disc ML-DmD32		4
haltere disc ML-DmD17-c3		15
eye-antennal disc ML-DmD11		5
antennal disc ML-DmD20-c5		4
mixed discs ML-DmD4-c1		11
CNS ML-DmBG1-c1		8
CNS ML-DmBG2-c2		8
tumorous blood cells mbn2		10
ovary fGS/OSS		7
ovary OSC		4
ovary OSS		4
Expression Level Scale		Very low Low Moderate Moderately high High

Linear, scaled to Moderate expression
Cell Line		Expression Level
Schneider line 2 S2R+		(27)
Schneider line 2 Sg4		2
embryonic 1182-4H		6
embryonic GM2		2
embryonic Kc167		3
embryonic S1		4
embryonic S3		2
leg disc CME L1		3
wing disc CME-W2		5
wing disc ML-DmD8		18
wing disc ML-DmD9		(77)
wing disc ML-DmD16-c3		11
wing disc ML-DmD21		5
wing disc ML-DmD32		4
haltere disc ML-DmD17-c3		15
eye-antennal disc ML-DmD11		5
antennal disc ML-DmD20-c5		4
mixed discs ML-DmD4-c1		11
CNS ML-DmBG1-c1		8
CNS ML-DmBG2-c2		8
tumorous blood cells mbn2		10
ovary fGS/OSS		7
ovary OSC		4
ovary OSS		4
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Cell Line		Expression Level
Schneider line 2 S2R+		27
Schneider line 2 Sg4		2
embryonic 1182-4H		6
embryonic GM2		2
embryonic Kc167		3
embryonic S1		4
embryonic S3		2
leg disc CME L1		3
wing disc CME-W2		5
wing disc ML-DmD8		18
wing disc ML-DmD9		77
wing disc ML-DmD16-c3		11
wing disc ML-DmD21		5
wing disc ML-DmD32		4
haltere disc ML-DmD17-c3		15
eye-antennal disc ML-DmD11		5
antennal disc ML-DmD20-c5		4
mixed discs ML-DmD4-c1		11
CNS ML-DmBG1-c1		8
CNS ML-DmBG2-c2		8
tumorous blood cells mbn2		10
ovary fGS/OSS		7
ovary OSC		4
ovary OSS		4
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Cell Line		Expression Level
Schneider line 2 S2R+		27
Schneider line 2 Sg4		2
embryonic 1182-4H		6
embryonic GM2		2
embryonic Kc167		3
embryonic S1		4
embryonic S3		2
leg disc CME L1		3
wing disc CME-W2		5
wing disc ML-DmD8		18
wing disc ML-DmD9		77
wing disc ML-DmD16-c3		11
wing disc ML-DmD21		5
wing disc ML-DmD32		4
haltere disc ML-DmD17-c3		15
eye-antennal disc ML-DmD11		5
antennal disc ML-DmD20-c5		4
mixed discs ML-DmD4-c1		11
CNS ML-DmBG1-c1		8
CNS ML-DmBG2-c2		8
tumorous blood cells mbn2		10
ovary fGS/OSS		7
ovary OSC		4
ovary OSS		4
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Cell Line		Expression Level
Schneider line 2 S2R+		27
Schneider line 2 Sg4		2
embryonic 1182-4H		6
embryonic GM2		2
embryonic Kc167		3
embryonic S1		4
embryonic S3		2
leg disc CME L1		3
wing disc CME-W2		5
wing disc ML-DmD8		18
wing disc ML-DmD9		77
wing disc ML-DmD16-c3		11
wing disc ML-DmD21		5
wing disc ML-DmD32		4
haltere disc ML-DmD17-c3		15
eye-antennal disc ML-DmD11		5
antennal disc ML-DmD20-c5		4
mixed discs ML-DmD4-c1		11
CNS ML-DmBG1-c1		8
CNS ML-DmBG2-c2		8
tumorous blood cells mbn2		10
ovary fGS/OSS		7
ovary OSC		4
ovary OSS		4
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Moderate expression
Cell Line		Expression Level
Schneider line 2 S2R+		27
Schneider line 2 Sg4		2
embryonic 1182-4H		6
embryonic GM2		2
embryonic Kc167		3
embryonic S1		4
embryonic S3		2
leg disc CME L1		3
wing disc CME-W2		5
wing disc ML-DmD8		18
wing disc ML-DmD9		(77)
wing disc ML-DmD16-c3		11
wing disc ML-DmD21		5
wing disc ML-DmD32		4
haltere disc ML-DmD17-c3		15
eye-antennal disc ML-DmD11		5
antennal disc ML-DmD20-c5		4
mixed discs ML-DmD4-c1		11
CNS ML-DmBG1-c1		8
CNS ML-DmBG2-c2		8
tumorous blood cells mbn2		10
ovary fGS/OSS		7
ovary OSC		4
ovary OSS		4
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Cell Line		Expression Level
Schneider line 2 S2R+		27
Schneider line 2 Sg4		2
embryonic 1182-4H		6
embryonic GM2		2
embryonic Kc167		3
embryonic S1		4
embryonic S3		2
leg disc CME L1		3
wing disc CME-W2		5
wing disc ML-DmD8		18
wing disc ML-DmD9		77
wing disc ML-DmD16-c3		11
wing disc ML-DmD21		5
wing disc ML-DmD32		4
haltere disc ML-DmD17-c3		15
eye-antennal disc ML-DmD11		5
antennal disc ML-DmD20-c5		4
mixed discs ML-DmD4-c1		11
CNS ML-DmBG1-c1		8
CNS ML-DmBG2-c2		8
tumorous blood cells mbn2		10
ovary fGS/OSS		7
ovary OSC		4
ovary OSS		4
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Cell Line		Expression Level
Schneider line 2 S2R+		27
Schneider line 2 Sg4		2
embryonic 1182-4H		6
embryonic GM2		2
embryonic Kc167		3
embryonic S1		4
embryonic S3		2
leg disc CME L1		3
wing disc CME-W2		5
wing disc ML-DmD8		18
wing disc ML-DmD9		77
wing disc ML-DmD16-c3		11
wing disc ML-DmD21		5
wing disc ML-DmD32		4
haltere disc ML-DmD17-c3		15
eye-antennal disc ML-DmD11		5
antennal disc ML-DmD20-c5		4
mixed discs ML-DmD4-c1		11
CNS ML-DmBG1-c1		8
CNS ML-DmBG2-c2		8
tumorous blood cells mbn2		10
ovary fGS/OSS		7
ovary OSC		4
ovary OSS		4
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Cell Line		Expression Level
Schneider line 2 S2R+
Schneider line 2 Sg4
embryonic 1182-4H
embryonic GM2
embryonic Kc167
embryonic S1
embryonic S3
leg disc CME L1
wing disc CME-W2
wing disc ML-DmD8
wing disc ML-DmD9
wing disc ML-DmD16-c3
wing disc ML-DmD21
wing disc ML-DmD32
haltere disc ML-DmD17-c3
eye-antennal disc ML-DmD11
antennal disc ML-DmD20-c5
mixed discs ML-DmD4-c1
CNS ML-DmBG1-c1
CNS ML-DmBG2-c2
tumorous blood cells mbn2
ovary fGS/OSS
ovary OSC
ovary OSS

modENCODE Treatments RNA-Seq

modENCODE Treatment Expression Data

(modENCODE_mRNA-Seq_treatments)

	Styles
	Linear
	Logarithmic
	Heatmap
	Scales
	gene max expression
	Moderate expression bin max
	High expression bin max
	Extremely high expression bin max

[download data (TSV)]

Guide to modENCODE expression level colors
	No/Extremely low expression (0 - 0)
	Very low expression (1 - 3)
	Low expression (4 - 10)
	Moderate expression (11 - 25)
	Moderately high expression (26 - 50)
	High expression (51 - 100)
	Very high expression (101 - 1000)
	Extremely high expression (>1000)

Linear, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		17
cold shock, 4-day adult		18
heat shock, 4-day adult		16
Cadmium 50 mM 6 hrs, larvae L3		10
Cadmium 50 mM 12 hrs, larvae L3		13
Cadmium 50 mM 48 hrs, 4-day adult		17
Cadmium 100 mM 48 hrs, 4-day adult		17
Copper 0.5 mM 12 hrs, larvae L3		8
Copper 15 mM 48 hrs, 4-day adult		8
Zinc 5 mM 12 hrs, larvae L3		12
Zinc 4.5 mM 48 hrs, 4-day adult		15
Ethanol 2.5% 3 hrs, larvae L3		22
Ethanol 5% 3 hrs, larvae L3		18
Ethanol 10% 3 hrs, larvae L3		12
Caffeine 1.5 mg/ml 4 hrs, larvae L3		17
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		15
Caffeine 25 mg/ml 48 hrs, 4-day adult		13
Paraquat 5 mM 48 hrs, 4-day adult		17
Paraquat 10 mM 48 hrs, 4-day adult		27
Rotenone 2 μg 12 hrs, larvae L3		14
Rotenone 8 μg 12 hrs, larvae L3		12
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		17
cold shock, 4-day adult		18
heat shock, 4-day adult		16
Cadmium 50 mM 6 hrs, larvae L3		10
Cadmium 50 mM 12 hrs, larvae L3		13
Cadmium 50 mM 48 hrs, 4-day adult		17
Cadmium 100 mM 48 hrs, 4-day adult		17
Copper 0.5 mM 12 hrs, larvae L3		8
Copper 15 mM 48 hrs, 4-day adult		8
Zinc 5 mM 12 hrs, larvae L3		12
Zinc 4.5 mM 48 hrs, 4-day adult		15
Ethanol 2.5% 3 hrs, larvae L3		22
Ethanol 5% 3 hrs, larvae L3		18
Ethanol 10% 3 hrs, larvae L3		12
Caffeine 1.5 mg/ml 4 hrs, larvae L3		17
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		15
Caffeine 25 mg/ml 48 hrs, 4-day adult		13
Paraquat 5 mM 48 hrs, 4-day adult		17
Paraquat 10 mM 48 hrs, 4-day adult		(27)
Rotenone 2 μg 12 hrs, larvae L3		14
Rotenone 8 μg 12 hrs, larvae L3		12
Expression Level Scale		Very low Low Moderate Moderately high

Linear, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		17
cold shock, 4-day adult		18
heat shock, 4-day adult		16
Cadmium 50 mM 6 hrs, larvae L3		10
Cadmium 50 mM 12 hrs, larvae L3		13
Cadmium 50 mM 48 hrs, 4-day adult		17
Cadmium 100 mM 48 hrs, 4-day adult		17
Copper 0.5 mM 12 hrs, larvae L3		8
Copper 15 mM 48 hrs, 4-day adult		8
Zinc 5 mM 12 hrs, larvae L3		12
Zinc 4.5 mM 48 hrs, 4-day adult		15
Ethanol 2.5% 3 hrs, larvae L3		22
Ethanol 5% 3 hrs, larvae L3		18
Ethanol 10% 3 hrs, larvae L3		12
Caffeine 1.5 mg/ml 4 hrs, larvae L3		17
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		15
Caffeine 25 mg/ml 48 hrs, 4-day adult		13
Paraquat 5 mM 48 hrs, 4-day adult		17
Paraquat 10 mM 48 hrs, 4-day adult		27
Rotenone 2 μg 12 hrs, larvae L3		14
Rotenone 8 μg 12 hrs, larvae L3		12
Expression Level Scale		Very low Low Moderate Moderately high High Very high

Linear, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		17
cold shock, 4-day adult		18
heat shock, 4-day adult		16
Cadmium 50 mM 6 hrs, larvae L3		10
Cadmium 50 mM 12 hrs, larvae L3		13
Cadmium 50 mM 48 hrs, 4-day adult		17
Cadmium 100 mM 48 hrs, 4-day adult		17
Copper 0.5 mM 12 hrs, larvae L3		8
Copper 15 mM 48 hrs, 4-day adult		8
Zinc 5 mM 12 hrs, larvae L3		12
Zinc 4.5 mM 48 hrs, 4-day adult		15
Ethanol 2.5% 3 hrs, larvae L3		22
Ethanol 5% 3 hrs, larvae L3		18
Ethanol 10% 3 hrs, larvae L3		12
Caffeine 1.5 mg/ml 4 hrs, larvae L3		17
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		15
Caffeine 25 mg/ml 48 hrs, 4-day adult		13
Paraquat 5 mM 48 hrs, 4-day adult		17
Paraquat 10 mM 48 hrs, 4-day adult		27
Rotenone 2 μg 12 hrs, larvae L3		14
Rotenone 8 μg 12 hrs, larvae L3		12
Expression Level Scale		Extremely high

log, scaled to maximum expression level
Treatment		Expression Level
extended cold, 4-day adult		17
cold shock, 4-day adult		18
heat shock, 4-day adult		16
Cadmium 50 mM 6 hrs, larvae L3		10
Cadmium 50 mM 12 hrs, larvae L3		13
Cadmium 50 mM 48 hrs, 4-day adult		17
Cadmium 100 mM 48 hrs, 4-day adult		17
Copper 0.5 mM 12 hrs, larvae L3		8
Copper 15 mM 48 hrs, 4-day adult		8
Zinc 5 mM 12 hrs, larvae L3		12
Zinc 4.5 mM 48 hrs, 4-day adult		15
Ethanol 2.5% 3 hrs, larvae L3		22
Ethanol 5% 3 hrs, larvae L3		18
Ethanol 10% 3 hrs, larvae L3		12
Caffeine 1.5 mg/ml 4 hrs, larvae L3		17
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		15
Caffeine 25 mg/ml 48 hrs, 4-day adult		13
Paraquat 5 mM 48 hrs, 4-day adult		17
Paraquat 10 mM 48 hrs, 4-day adult		27
Rotenone 2 μg 12 hrs, larvae L3		14
Rotenone 8 μg 12 hrs, larvae L3		12
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to Moderate expression
Treatment		Expression Level
extended cold, 4-day adult		17
cold shock, 4-day adult		18
heat shock, 4-day adult		16
Cadmium 50 mM 6 hrs, larvae L3		10
Cadmium 50 mM 12 hrs, larvae L3		13
Cadmium 50 mM 48 hrs, 4-day adult		17
Cadmium 100 mM 48 hrs, 4-day adult		17
Copper 0.5 mM 12 hrs, larvae L3		8
Copper 15 mM 48 hrs, 4-day adult		8
Zinc 5 mM 12 hrs, larvae L3		12
Zinc 4.5 mM 48 hrs, 4-day adult		15
Ethanol 2.5% 3 hrs, larvae L3		22
Ethanol 5% 3 hrs, larvae L3		18
Ethanol 10% 3 hrs, larvae L3		12
Caffeine 1.5 mg/ml 4 hrs, larvae L3		17
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		15
Caffeine 25 mg/ml 48 hrs, 4-day adult		13
Paraquat 5 mM 48 hrs, 4-day adult		17
Paraquat 10 mM 48 hrs, 4-day adult		27
Rotenone 2 μg 12 hrs, larvae L3		14
Rotenone 8 μg 12 hrs, larvae L3		12
Expression Level Scale		Very low Low Moderate Moderately high

log, scaled to High expression
Treatment		Expression Level
extended cold, 4-day adult		17
cold shock, 4-day adult		18
heat shock, 4-day adult		16
Cadmium 50 mM 6 hrs, larvae L3		10
Cadmium 50 mM 12 hrs, larvae L3		13
Cadmium 50 mM 48 hrs, 4-day adult		17
Cadmium 100 mM 48 hrs, 4-day adult		17
Copper 0.5 mM 12 hrs, larvae L3		8
Copper 15 mM 48 hrs, 4-day adult		8
Zinc 5 mM 12 hrs, larvae L3		12
Zinc 4.5 mM 48 hrs, 4-day adult		15
Ethanol 2.5% 3 hrs, larvae L3		22
Ethanol 5% 3 hrs, larvae L3		18
Ethanol 10% 3 hrs, larvae L3		12
Caffeine 1.5 mg/ml 4 hrs, larvae L3		17
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		15
Caffeine 25 mg/ml 48 hrs, 4-day adult		13
Paraquat 5 mM 48 hrs, 4-day adult		17
Paraquat 10 mM 48 hrs, 4-day adult		27
Rotenone 2 μg 12 hrs, larvae L3		14
Rotenone 8 μg 12 hrs, larvae L3		12
Expression Level Scale		Very low Low Moderate Moderately high High Very high

log, scaled to Extremely high expression
Treatment		Expression Level
extended cold, 4-day adult		17
cold shock, 4-day adult		18
heat shock, 4-day adult		16
Cadmium 50 mM 6 hrs, larvae L3		10
Cadmium 50 mM 12 hrs, larvae L3		13
Cadmium 50 mM 48 hrs, 4-day adult		17
Cadmium 100 mM 48 hrs, 4-day adult		17
Copper 0.5 mM 12 hrs, larvae L3		8
Copper 15 mM 48 hrs, 4-day adult		8
Zinc 5 mM 12 hrs, larvae L3		12
Zinc 4.5 mM 48 hrs, 4-day adult		15
Ethanol 2.5% 3 hrs, larvae L3		22
Ethanol 5% 3 hrs, larvae L3		18
Ethanol 10% 3 hrs, larvae L3		12
Caffeine 1.5 mg/ml 4 hrs, larvae L3		17
Caffeine 2.5 mg/ml 48 hrs, 4-day adult		15
Caffeine 25 mg/ml 48 hrs, 4-day adult		13
Paraquat 5 mM 48 hrs, 4-day adult		17
Paraquat 10 mM 48 hrs, 4-day adult		27
Rotenone 2 μg 12 hrs, larvae L3		14
Rotenone 8 μg 12 hrs, larvae L3		12
Expression Level Scale		Very low Low Moderate Moderately high High Very high Extremely high

Heatmap
Treatment		Expression Level
extended cold, 4-day adult
cold shock, 4-day adult
heat shock, 4-day adult
Cadmium 50 mM 6 hrs, larvae L3
Cadmium 50 mM 12 hrs, larvae L3
Cadmium 50 mM 48 hrs, 4-day adult
Cadmium 100 mM 48 hrs, 4-day adult
Copper 0.5 mM 12 hrs, larvae L3
Copper 15 mM 48 hrs, 4-day adult
Zinc 5 mM 12 hrs, larvae L3
Zinc 4.5 mM 48 hrs, 4-day adult
Ethanol 2.5% 3 hrs, larvae L3
Ethanol 5% 3 hrs, larvae L3
Ethanol 10% 3 hrs, larvae L3
Caffeine 1.5 mg/ml 4 hrs, larvae L3
Caffeine 2.5 mg/ml 48 hrs, 4-day adult
Caffeine 25 mg/ml 48 hrs, 4-day adult
Paraquat 5 mM 48 hrs, 4-day adult
Paraquat 10 mM 48 hrs, 4-day adult
Rotenone 2 μg 12 hrs, larvae L3
Rotenone 8 μg 12 hrs, larvae L3

Expression Clusters

A cluster of genes with similar mRNA expression dynamics across development.

(The modENCODE Consortium, 2010, Graveley et al., 2011)

External Data & Images

Linkouts

FLIGHT - Cell culture data for RNAi and other high-throughput technologies

•

FBgn0035347

FlyAtlas - Adult expression by tissue, using Affymetrix Dros2 array

•

CG1141-RA;CG16764-RA

Alleles & Phenotypes

Summary of Allele Phenotypes

Lethality

Allele

lethal | pupal stage, with Scer\GAL4^pnr-MD237

CG33232^GD13356

viable

CG33232^EY06775

viable, with Scer\GAL4^pnr-MD237

CG33232^GD7292

Sterility

Allele

fertile

CG33232^EY06775

Phenotype manifest in

Allele

Classical Alleles ( 10 )

For All Classical Alleles Show

Allele of CG33232	Mutagen	Stocks	Known lesion
CG33232^B474		1	--
CG33232^d02885		1	--
CG33232^e02809		1	--
CG33232^e02866		1	--
CG33232^EP3564	P-element activity	1	Yes
CG33232^EY06775	P-element activity	1	--
CG33232^f06740		1	--
CG33232^MI02638		1	--
CG33232^MI06402		1	--
CG33232^UM-8164-3		1	--

Alleles Carried on Transgenic Constructs ( 5 )

For All Alleles Carried on Transgenic Constructs Show

Allele of CG33232	Mutagen	Stocks	Known lesion
CG33232^GD13356	in vitro construct - RNAi in vitro construct - regulatory fusion	2	Yes
CG33232^GD7292	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
CG33232^HMS02261	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
CG33232^JF01152	in vitro construct - RNAi in vitro construct - regulatory fusion	1	Yes
CG33232^NIG.1141R	in vitro construct - RNAi in vitro construct - regulatory fusion	0	Yes

Aneuploid Aberrations

Disrupted in

Df(3L)Exel6090

(Ryder, 2004.4.26)

Transgenic Constructs & Insertions

Transgenic Constructs

Type of construct

Name

Expression data

UAS construct

Insertions

Type of insertions

Name

Expression data

insertion of mobile activating element

P{EP}CG1146^EP3564

P{EPgy2}CG33232^EY06775

P{XP}CG33232^d02885

miscellaneous insertions

Mi{MIC}CG33232^MI02638

Mi{MIC}CG33232^MI06402

P{PTT-GB}CB03740

P{RS3}CG33232^UM-8164-3

PBac{5HPw⁺}CG33232^B474

PBac{RB}CG33232^e02809

PBac{RB}CG33232^e02866

PBac{WH}CG33232^f06740

Gene Ontology: Function, Process & Cellular Component ( 2 unique terms )

Terms Based on Experimental Evidence ( 0 terms )

Terms Based on Predictions or Assertions ( 2 terms )

Molecular Function

CV term

Evidence

References

actin binding

inferred from sequence or structural similarity

(Goldstein and Gunawardena, 2000)

inferred from sequence or structural similarity with EMBL:AF059486

(FlyBase, 1992-)

Biological Process

CV term

Evidence

References

cytoskeleton organization

inferred from electronic annotation with InterPro:IPR003128

(FlyBase Curators et al., 2004-)

Cellular Component ( 0 terms)

Sequence Ontology: Class of Gene

gene_with_edited_transcript

(Graveley et al., 2011)

nuclear_gene

protein_coding_gene

Interactions & Pathways

Summary of Physical Interactions

Summary of Genetic Interactions

Interacts with

Please look at the allele data for full details of the genetic interactions

CG33232 allele

Gene

References

External Data

Linkouts

BioGRID - A database of protein and genetic interactions

•

77853

DroID - A comprehensive database of gene and protein interactions.

•

FBgn0035347

InterologFinder Protein-protein interactions (PPI) from both known and predicted PPI data sets.

•

2769004

Orthologs

OrthoDB Orthologs (46) - based on analysis using Dmel annotation version 5.41

OrthoDB Ortholog Groups

OrthoDB orthology group searches

(Waterhouse et al., 2011, Nucleic Acids Res. 39(Database issue): D283--D288)

Drosophila inclusive ortholog search

EOG6640X8

Dipteran inclusive ortholog search

EOG6PK2GT

Insect inclusive ortholog search

EOG67H4JV

Arthropod inclusive ortholog search

EOG6DZ091

Metazoa inclusive ortholog search

EOG612ZZF

Orthologs in Drosophila Species (EOG6640X8)

Organism

Common Name

Gene

AAA Syntenic Ortholog

Multiple Dmel Genes in this Orthologous Group

Drosophila melanogaster

fruit fly

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA23943

Drosophila persimilis

Dper\GL24663

Drosophila willistoni

Dwil\GK12650

Drosophila virilis

Dvir\GJ16086

Drosophila mojavensis

Dmoj\GI12787

Drosophila grimshawi

Dgri\GH15732

Orthologs in non-Drosophila Dipterans (EOG6PK2GT)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Aedes aegypti

Yellow fever mosquito

Aaeg\AAEL003105

Anopheles gambiae

Malaria mosquito

Agam\AGAP007181

Culex quinquefasciatus

Southern house mosquito

Cqui\CPIJ003700

Orthologs in non-Dipteran Insects (EOG67H4JV)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Apis mellifera

Western honey bee

Amel\GB54235

Apis mellifera

Western honey bee

Amel\GB54236

Acromyrmex echinatior

Panamanian leafcutter ant

Aech\AECH18451

Atta cephalotes

Leafcutter ant

Acep\ACEP10567

Camponotus floridanus

Florida carpenter ant

Cflo\CFLO21306

Harpegnathos saltator

Jerdons jumping ant

Hsal\HSAL13944

Linepithema humile

Argentine ant

Lhum\LH20440

Linepithema humile

Argentine ant

Lhum\LH20438

Pogonomyrmex barbatus

Red harvester ant

Pbar\PB22798

Pogonomyrmex barbatus

Red harvester ant

Pbar\PB26209

Solenopsis invicta

Red fire ant

Sinv\SINV11155

Solenopsis invicta

Red fire ant

Sinv\SINV14573

Solenopsis invicta

Red fire ant

Sinv\SINV20766

Acyrthosiphon pisum

Pea aphid

Apim\ACYPI008459

Bombyx mori

Silkmoth

Bmor\BGIBMGA011630

Pediculus humanus

Human body louse

Phum\PHUM294450

Tribolium castaneum

Red flour beetle

Tcas\TC003538

Orthologs in non-Insect Arthropods (EOG6DZ091)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Daphnia pulex

Water flea

Dpux\JGI_V11_96226

Ixodes scapularis

Deer tick

Isca\ISCW003425

Orthologs in non-Arthropod Metazoa (EOG612ZZF)

Organism

Common Name

Gene

Multiple Dmel Genes in this Orthologous Group

Caenorhabditis elegans

Nematode

Cele\viln-1

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_007557gn

Strongylocentrotus purpuratus

Purple sea urchin

Spur\SPU_028287gn

Danio rerio

Zebrafish

Drer\si:dkeyp-94b4.1

Danio rerio

Zebrafish

Drer\ENSDARG00000014651

Danio rerio

Zebrafish

Drer\ENSDARG00000055075

Danio rerio

Zebrafish

Drer\ENSDARG00000017036

Xenopus tropicalis

Western clawed frog

Xtro\svil

Gallus gallus

Domestic chicken

Ggal\SVIL

Mus musculus

House mouse

Mmus\Svil

Rattus norvegicus

Norway rat

Rnor\ENSRNOG00000018110

Homo sapiens

Human

Hsap\ENSG00000197321

Human Orthologs (1)

Gene

OMIM

HGNC

Hsap\ENSG00000197321

AAA Orthologs (11) based on analysis using Dmel annotation version 4.3

Organism

Gene

Drosophila simulans

Drosophila sechellia

Drosophila erecta

Drosophila yakuba

Drosophila ananassae

Drosophila pseudoobscura pseudoobscura

Dpse\GA23943

Drosophila persimilis

Dper\GL24663

Drosophila willistoni

Dwil\GK12650

Drosophila virilis

Dvir\GJ16086

Drosophila mojavensis

Dmoj\GI12787

Drosophila grimshawi

Dgri\GH15732

Stocks & Reagents

Stocks Listed in FlyBase ( 15 )

Bloomington

31579

y¹ v¹; P{TRiP.JF01152}attP2

35874

y¹ w^*; Mi{MIC}CG33232^MI02638

40249

y¹ w^*; Mi{MIC}CG33232^MI06402

41696

y¹ sc^* v¹; P{TRiP.HMS02261}attP2

Harvard

P{XP}CG33232^d02885

PBac{RB}CG33232^e02809

PBac{RB}CG33232^e02866

PBac{WH}CG33232^f06740

Kyoto

124386

w¹¹¹⁸; P{RS3}CG33232^UM-8164-3

VDRC

v18081

w¹¹¹⁸; P{GD7292}v18081

v26976

w¹¹¹⁸; P{GD13356}v26976

v26978

w¹¹¹⁸; P{GD13356}v26978

More stocks available...

Genomic Clones ( 2 )

Please Note FlyBase no longer curates genomic clone accessions so this list may not be complete

cDNA Clones ( 89 )

Please Note

This section lists cDNAs and ESTs that fall within the genomic extent of the gene model, which may include cDNAs and ESTs of genes within introns, or of overlapping genes. Please see GBrowse for alignment of the cDNAs and ESTs to the gene model.

cDNA Clones, Fully Sequenced

BDGP DGC clones